Rv0668 - c.2370G>C


Drug resistance types
13 Sensitive 21 RR-TB 94 HR-TB 52 MDR-TB 3 Pre-XDR-TB 0 XDR-TB 51 Other
lineage Counts
lineage Count
M.canetti;lineage2.1;lineage4.9 24
La3;M.canetti;lineage2.1;lineage3.1 1
lineage4.6.4 2
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.9 12
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La2;lineage4.9 1
M.canetti;lineage4.9 4
lineage4.1.2.1 9
lineage4.9 47
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 5
lineage2.1;lineage4.9 7
lineage2.2.2 2
lineage1.1.2;lineage4 1
lineage3 5
M.canetti;lineage4.3.1;lineage4.9 1
M.canetti;lineage1 1
La1.8.1 2
M.canetti;lineage2.1;lineage4.9;lineage6.3 6
M.canetti;lineage2.1;lineage4.1.2.1 1
lineage4.1.2.1.1 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
lineage6.1.1 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
La1.7;lineage4.2 1
lineage4.3.3 2
lineage2.2.1.1 1
La3;M.canetti;lineage3.1 1
M.canetti;lineage2.1 1
lineage1.1.1 1
lineage5.2 2
lineage2.1;lineage4.1.1.1;lineage6.3 2
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.6.2.2 2
lineage4.3.2;lineage4.9 1
La1.7;M.canetti;lineage4.9 1
lineage1.2.1.2 1
La1.7.1 1
lineage4.4.1.1 1
lineage2.1;lineage4.9;lineage7 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
lineage2.2.1 6
5
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.9;lineage6.3 1
lineage4.3.4.1 1
La3;M.canetti;lineage4.8;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage4.6.1.1 1
lineage2.1;lineage4.3.2 1
La3;M.canetti;lineage4.9 2
lineage4.6.3;lineage4.9 1
lineage4.9;lineage7 3
lineage1.1.3.1 2
M.canetti;lineage2.2 1
lineage4.8 2
lineage4.9;lineage9 3
La3;lineage4.3.4 1
lineage4.2;lineage4.8.1;lineage4.9 2
lineage2.1;lineage4.1.4;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
La2;lineage4.9;lineage9 1
lineage1.2.2.2 1
lineage4.5 1
M.canetti;lineage2.1;lineage6.3 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
lineage1.2.1.2.1 1
lineage2.1;lineage2.2;lineage6.3 1
La1.2.BCG 1
M.canetti;lineage2.1;lineage3 1
lineage4.2;lineage4.9 2
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La3;lineage4.9 2
lineage2.1;lineage4.9;lineage6.3 2
lineage3.1.2.1;lineage3.1.2.2 1
M.canetti;lineage4.9;lineage9 1
lineage4.3.1;lineage4.9;lineage6 1
lineage4.1.1.3 1
La1.2;La1.8.1 1
lineage3.1.2.2 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
lineage1.1 1
lineage4.3.4.2.1 2
M.canetti;lineage2.1;lineage4 1
spoligotype Counts
spoligotype Count
None 234
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675506 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
ERR9119508 MDR-TB lineage4.6.4 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR323036 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR323039 HR-TB La2;lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR1162740 Other lineage4.1.2.1 None
SRR3675269 RR-TB lineage4.9 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
ERR4817692 HR-TB lineage1.1.2;lineage4 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4797588 MDR-TB lineage3 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
ERR6359074 HR-TB lineage4.9 None
SRR1791696 Other La1.8.1 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR4819877 HR-TB lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
ERR4816466 HR-TB lineage4.9 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR6046594 Sensitive lineage4.9 None
ERR176766 HR-TB lineage2.1;lineage4.9 None
SRR1165423 RR-TB lineage4.1.2.1 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3799304 Other lineage6.1.1 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
SRR23961559 Other La1.7;lineage4.2 None
ERR5908228 RR-TB lineage4.3.3 None
SRR6079962 HR-TB lineage2.2.1.1 None
SRR13861305 Other lineage4.9 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR323041 HR-TB M.canetti;lineage2.1 None
SRR6045233 Other M.canetti;lineage4.9 None
SRR14066533 Sensitive lineage1.1.1 None
ERR9119500 MDR-TB lineage5.2 None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1162864 Other lineage4.1.2.1 None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR12006550 Sensitive lineage1.2.1.2 None
SRR7240492 HR-TB La1.7.1 None
SRR1173453 Other lineage4.4.1.1 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR6046382 Sensitive lineage2.2.1 None
SRR1640750 Other None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR3675444 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR6326069 Pre-XDR-TB lineage4.3.4.1 None
SRR29096410 Other lineage4.9 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR3797023 HR-TB La1.8.1 None
ERR9786986 HR-TB lineage4.1.2.1 None
SRR1172310 HR-TB lineage4.9 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR6358755 Other lineage4.6.1.1 None
ERR2693242 RR-TB lineage2.1;lineage4.9 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR4872102 MDR-TB lineage4.6.4 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
ERR8665994 Other lineage4.9 None
ERR5162090 RR-TB lineage4.9 None
ERR3797083 RR-TB lineage4.9 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675284 Sensitive lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR2693228 RR-TB lineage4.9 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6650275 Sensitive lineage1.1.3.1 None
SRR17658565 Pre-XDR-TB lineage3 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR9786444 Sensitive lineage4.8 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR3468544 Other lineage2.1;lineage4.9 None
SRR13423649 Sensitive lineage2.2.1 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6045219 HR-TB lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR4798504 RR-TB lineage3 None
ERR5917710 Other lineage4.1.2.1 None
ERR161037 Other lineage4.9 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR3675280 RR-TB lineage4.9 None
ERR4815441 HR-TB lineage4.9 None
SRR6458421 MDR-TB lineage2.2.1 None
SRR6044942 HR-TB lineage4.9 None
SRR29096150 Other lineage4.9 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
ERR3283021 HR-TB lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR4797201 Other lineage1.2.2.2 None
SRR069981 HR-TB lineage2.2.2 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR7535086 Other None
ERR4872094 MDR-TB lineage5.2 None
SRR13423544 Other lineage4.5 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4816656 Other lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SAMN02414850 Other lineage4.1.2.1 None
SRR1183111 HR-TB lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR1510066 RR-TB lineage1.2.1.2.1 None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046485 Other lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR4800527 MDR-TB lineage2.2.1 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR9119096 RR-TB lineage4.3.3 None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR987722 MDR-TB None
ERR212001 HR-TB None
SRR13861396 HR-TB lineage4.9 None
SRR6044815 Other lineage4.9 None
SRR3675487 Other M.canetti;lineage4.9 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
SRR6045555 Other lineage4.9 None
SRR17832802 HR-TB lineage3 None
ERR3275196 Other lineage2.2.1 nl
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046141 Other lineage4.9 None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR29055611 Sensitive lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
ERR9787014 Other lineage6.1.1 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR4821053 RR-TB lineage3 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR4820773 HR-TB lineage4.9 None
SRR3675495 Other lineage2.1;lineage4.9 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR1167055 Other lineage4.1.2.1 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR13861153 Other lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
SRR5709967 MDR-TB lineage2.2.1 None
ERR2229143 RR-TB lineage4.9 None
SRR3675515 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311089 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4816478 HR-TB lineage4 None
ERR4188350 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9786711 Sensitive lineage4.6.2.2 None
ERR3797047 MDR-TB lineage4.9 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675456 RR-TB lineage4.9;lineage7 None
SRR3675494 RR-TB lineage4.9 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
ERR4816151 Sensitive lineage4.8 None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1165584 Other lineage4.1.2.1 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR234659 Other None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
SRR3675539 HR-TB lineage4.9;lineage7 None
SRR3675243 Other lineage4.9 None
SRR3675545 Other La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675510 Sensitive La3;lineage4.9 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4819241 Other lineage4.9 None
SRR13861288 Other lineage4.9 None
SRR13861510 Other lineage4.9 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
ERR3468607 Other lineage4.9 None
ERR4553435 MDR-TB lineage1.1.3.1 None
SRR1165506 Other lineage4.1.2.1 None
SRR3675507 Other lineage4.9 None
ERR387051 Other lineage4.9 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None