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SRA data
Rv0682
- c.123T>C
Drug resistance types
134 Sensitive
36 RR-TB
158 HR-TB
69 MDR-TB
12 Pre-XDR-TB
3 XDR-TB
189 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
216
lineage2.2.1
34
M.canetti;lineage2.1;lineage4.9
26
lineage4.1.2.1
20
La3;lineage4.9
14
lineage3
13
lineage4.8
12
La3;M.canetti;lineage2.1;lineage4.9
12
lineage4
10
lineage2.1;lineage4.9
9
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
601
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR038268
HR-TB
La3;M.canetti;lineage4.8;lineage4.9
None
ERR1023295
MDR-TB
M.canetti;lineage2.1;lineage4.1.2.1
None
ERR1023525
HR-TB
La1.7;lineage4.9
None
ERR1034634
HR-TB
lineage4.9
None
ERR1035122
Sensitive
lineage4.9
None
ERR1035239
MDR-TB
M.canetti;lineage2.1;lineage4.9
None
ERR1063839
MDR-TB
La2;lineage2.2
None
ERR1063849
HR-TB
lineage4.9
None
ERR1063856
HR-TB
M.canetti;lineage4.9;lineage9
None
ERR1063857
MDR-TB
La2;lineage4.9
None
Showing 1 to 10 of 601 entries
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