TB-Profiler result

Run: ERR736817
Summary

Run ID: ERR736817

Sample name:

Date: 02-04-2023 04:19:14

Number of reads: 1091296

Percentage reads mapped: 18.42

Strain: lineage4.3.4

Drug-resistance: HR-TB

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Drug resistance: This table reports drug-resistance associated mutations found in known resistance genes
Drug Resistance Supporting mutations
Lineage Table: The lineage is inferred by analysing lineage specific SNPs
Lineage Family Main Spoligotype RDs Frequency
lineage4 Euro-American LAM;T;S;X;H None 1.0
lineage4.3 Euro-American (LAM) mainly-LAM None 1.0
lineage4.3.4 Euro-American (LAM) LAM RD174 1.0
Drug resistance-Associated Mutations: This table reports mutations found in candidate resistance genes which have been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs
katG 2155693 p.Ser140Asn missense_variant 0.44 isoniazid
embB 4247445 p.Asp311Gly missense_variant 0.21 ethambutol
Non-Associated Mutations: This table reports mutations found in candidate resistance genes which have not been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction
gyrB 6100 c.861G>C synonymous_variant 0.36
gyrB 6115 c.876A>G synonymous_variant 0.59
gyrB 6127 c.888G>C synonymous_variant 0.56
gyrB 6140 p.Val301Leu missense_variant 0.37
gyrB 6160 c.921C>G synonymous_variant 0.66
gyrB 6190 c.951A>G synonymous_variant 0.59
gyrB 6202 c.963C>T synonymous_variant 0.49
gyrB 6203 p.Ser322Ala missense_variant 0.45
gyrB 6214 c.975G>C synonymous_variant 0.45
gyrB 6223 c.984G>C synonymous_variant 0.46
gyrB 6238 c.999G>A synonymous_variant 0.33
gyrB 6242 p.Arg335Lys missense_variant 0.29
gyrB 6250 c.1011A>G synonymous_variant 0.29
gyrB 6253 c.1014G>C synonymous_variant 0.26
gyrB 6271 c.1032C>T synonymous_variant 0.25
gyrB 6286 c.1047T>C synonymous_variant 0.23
gyrB 6298 c.1059C>T synonymous_variant 0.2
gyrA 6307 c.-995T>G upstream_gene_variant 0.22
gyrA 6310 c.-992G>C upstream_gene_variant 0.22
gyrA 6325 c.-977C>G upstream_gene_variant 0.23
gyrB 6327 p.Ser363Thr missense_variant 0.23
gyrA 6331 c.-971A>G upstream_gene_variant 0.23
gyrA 6346 c.-956C>T upstream_gene_variant 0.25
gyrB 6398 p.Val387Ile missense_variant 0.21
gyrA 6514 c.-788G>A upstream_gene_variant 0.22
gyrA 6526 c.-776T>C upstream_gene_variant 0.39
gyrA 6532 c.-770C>T upstream_gene_variant 0.36
gyrA 6547 c.-755T>C upstream_gene_variant 0.37
gyrA 6550 c.-752A>G upstream_gene_variant 0.39
gyrA 6551 c.-751_-749delTTGinsCTC upstream_gene_variant 0.39
gyrA 6556 c.-746C>A upstream_gene_variant 0.48
gyrA 6577 c.-725T>C upstream_gene_variant 0.55
gyrA 6580 c.-722C>T upstream_gene_variant 0.58
gyrA 6583 c.-719G>C upstream_gene_variant 0.58
gyrA 6598 c.-704C>G upstream_gene_variant 0.66
gyrA 6610 c.-692C>G upstream_gene_variant 0.65
gyrA 6613 c.-689A>G upstream_gene_variant 0.62
gyrA 6616 c.-686A>G upstream_gene_variant 0.62
gyrA 6619 c.-683T>C upstream_gene_variant 0.63
gyrA 6622 c.-680C>T upstream_gene_variant 0.64
gyrA 6637 c.-665T>G upstream_gene_variant 0.75
gyrA 6640 c.-662A>C upstream_gene_variant 0.76
gyrA 6643 c.-659A>G upstream_gene_variant 0.79
gyrA 6649 c.-653T>A upstream_gene_variant 0.81
gyrA 6673 c.-629A>C upstream_gene_variant 0.8
gyrA 6676 c.-626T>G upstream_gene_variant 0.82
gyrA 6680 c.-622C>T upstream_gene_variant 0.81
gyrA 6700 c.-602T>C upstream_gene_variant 0.76
gyrA 6703 c.-599G>C upstream_gene_variant 0.74
gyrA 6709 c.-593A>G upstream_gene_variant 0.73
gyrA 6712 c.-590G>C upstream_gene_variant 0.74
gyrA 6724 c.-578G>C upstream_gene_variant 0.7
gyrA 6730 c.-572A>C upstream_gene_variant 0.69
gyrA 6745 c.-557T>C upstream_gene_variant 0.67
gyrA 6760 c.-542G>C upstream_gene_variant 0.66
gyrA 6764 c.-538C>T upstream_gene_variant 0.61
gyrA 6775 c.-527G>C upstream_gene_variant 0.58
gyrA 6778 c.-524C>T upstream_gene_variant 0.52
gyrA 6793 c.-509T>C upstream_gene_variant 0.49
gyrB 6797 p.Gly520Ser missense_variant 0.51
gyrA 6808 c.-494C>T upstream_gene_variant 0.56
gyrA 6811 c.-491C>T upstream_gene_variant 0.56
gyrA 6824 c.-478C>T upstream_gene_variant 0.49
gyrA 6878 c.-424T>C upstream_gene_variant 0.21
gyrA 6881 c.-421T>C upstream_gene_variant 0.21
gyrA 7033 c.-269G>C upstream_gene_variant 0.18
gyrB 7047 p.Lys603Thr missense_variant 0.21
gyrB 7051 p.Glu604Asp missense_variant 0.3
gyrA 7060 c.-242T>C upstream_gene_variant 0.44
gyrA 7066 c.-236G>C upstream_gene_variant 0.43
gyrA 7069 c.-233C>T upstream_gene_variant 0.56
gyrA 7078 c.-224A>G upstream_gene_variant 0.61
gyrA 7081 c.-221T>C upstream_gene_variant 0.61
gyrA 7084 c.-218A>G upstream_gene_variant 0.65
gyrA 7093 c.-209T>C upstream_gene_variant 0.73
gyrA 7114 c.-188C>G upstream_gene_variant 0.76
gyrA 7120 c.-182T>C upstream_gene_variant 0.75
gyrA 7123 c.-179C>G upstream_gene_variant 0.76
gyrA 7129 c.-173T>G upstream_gene_variant 0.77
gyrA 7132 c.-170T>G upstream_gene_variant 0.79
gyrA 7147 c.-155G>C upstream_gene_variant 0.81
gyrA 7150 c.-152G>C upstream_gene_variant 0.8
gyrA 7153 c.-149G>C upstream_gene_variant 0.81
gyrA 7165 c.-137C>G upstream_gene_variant 0.79
gyrA 7168 c.-134C>G upstream_gene_variant 0.78
gyrA 7174 c.-128C>T upstream_gene_variant 0.76
gyrA 7178 c.-124T>C upstream_gene_variant 0.78
gyrA 7186 c.-116C>G upstream_gene_variant 0.76
gyrB 7210 p.Asp657Glu missense_variant 0.64
gyrA 7213 c.-89G>A upstream_gene_variant 0.65
gyrA 7216 c.-86G>T upstream_gene_variant 0.65
gyrA 7225 c.-77T>C upstream_gene_variant 0.62
gyrA 7234 c.-68C>T upstream_gene_variant 0.52
gyrA 7237 c.-65C>T upstream_gene_variant 0.55
gyrA 7243 c.-59G>A upstream_gene_variant 0.5
gyrA 7246 c.-56T>C upstream_gene_variant 0.45
gyrA 7252 c.-50G>T upstream_gene_variant 0.45
gyrA 7258 c.-44G>T upstream_gene_variant 0.31
gyrA 7264 c.-38C>T upstream_gene_variant 0.2
gyrA 7343 c.42G>C synonymous_variant 0.44
gyrA 7349 c.48A>G synonymous_variant 0.54
gyrA 7355 c.54T>C synonymous_variant 0.54
gyrA 7358 c.57C>T synonymous_variant 0.6
gyrA 7362 p.Glu21Gln missense_variant 1.0
gyrA 7391 c.90C>T synonymous_variant 0.56
gyrA 7394 c.93T>C synonymous_variant 0.57
gyrA 7406 c.105G>C synonymous_variant 0.67
gyrA 7415 c.114C>G synonymous_variant 0.65
gyrA 7433 c.132G>A synonymous_variant 0.63
gyrA 7442 c.141G>C synonymous_variant 0.59
gyrA 7448 c.147G>A synonymous_variant 0.57
gyrA 7454 c.153G>A synonymous_variant 0.54
gyrA 7457 c.156T>C synonymous_variant 0.53
gyrA 7463 c.162G>C synonymous_variant 0.45
gyrA 7469 c.168C>G synonymous_variant 0.5
gyrA 7472 c.171T>C synonymous_variant 0.47
gyrA 7475 c.174A>G synonymous_variant 0.53
gyrA 7484 c.183T>C synonymous_variant 0.67
gyrA 7496 c.195C>T synonymous_variant 0.67
gyrA 7499 c.198G>C synonymous_variant 0.69
gyrA 7514 c.213C>G synonymous_variant 0.64
gyrA 7517 c.216G>A synonymous_variant 0.62
gyrA 7520 c.219G>C synonymous_variant 0.62
gyrA 7523 c.222C>A synonymous_variant 0.64
gyrA 7526 c.225G>C synonymous_variant 0.67
gyrA 7529 c.228G>C synonymous_variant 0.68
gyrA 7541 c.240C>G synonymous_variant 0.77
gyrA 7585 p.Ser95Thr missense_variant 1.0
gyrA 7592 c.291G>C synonymous_variant 0.83
gyrA 7595 c.294C>G synonymous_variant 0.82
gyrA 7607 c.306C>G synonymous_variant 0.85
gyrA 7631 c.330G>C synonymous_variant 0.83
gyrA 7637 c.336C>G synonymous_variant 0.82
gyrA 7655 c.354G>C synonymous_variant 0.8
gyrA 7658 c.357A>G synonymous_variant 0.78
gyrA 7664 c.363T>C synonymous_variant 0.74
gyrA 7667 c.366C>T synonymous_variant 0.74
gyrA 7670 c.369A>G synonymous_variant 0.77
gyrA 7673 c.372G>A synonymous_variant 0.78
gyrA 7679 c.378G>C synonymous_variant 0.79
gyrA 7683 c.382A>C synonymous_variant 0.81
gyrA 7694 c.393A>G synonymous_variant 0.84
gyrA 7706 c.405C>T synonymous_variant 0.83
gyrA 7710 c.409_411delTTGinsCTT synonymous_variant 0.82
gyrA 7715 c.414G>C synonymous_variant 0.83
gyrA 7728 c.427_429delAGGinsCGC synonymous_variant 0.85
gyrA 7763 c.462T>G synonymous_variant 0.85
gyrA 7766 c.465C>T synonymous_variant 0.85
gyrA 7775 c.474C>G synonymous_variant 0.83
gyrA 7778 c.477G>C synonymous_variant 0.81
gyrA 7784 c.483A>G synonymous_variant 0.81
gyrA 7793 c.492G>C synonymous_variant 0.71
gyrA 7796 c.495G>T synonymous_variant 0.68
gyrA 7799 c.498A>G synonymous_variant 0.68
gyrA 7814 c.513C>G synonymous_variant 0.67
gyrA 7832 c.531G>C synonymous_variant 0.55
gyrA 7835 c.534A>G synonymous_variant 0.45
gyrA 7853 c.552C>G synonymous_variant 0.4
gyrA 7859 c.558A>C synonymous_variant 0.37
gyrA 7862 c.561C>G synonymous_variant 0.33
gyrA 7865 c.564T>C synonymous_variant 0.33
gyrA 7880 c.579C>T synonymous_variant 0.29
gyrA 7883 c.582G>C synonymous_variant 0.29
gyrA 7886 c.585T>C synonymous_variant 0.3
gyrA 8147 c.846C>T synonymous_variant 0.4
gyrA 8156 c.855T>C synonymous_variant 0.37
gyrA 8168 c.867A>G synonymous_variant 0.35
gyrA 8177 c.876A>C synonymous_variant 0.37
gyrA 8189 c.888G>C synonymous_variant 0.35
gyrA 8190 p.Ala297Asn missense_variant 0.35
gyrA 8198 c.897T>C synonymous_variant 0.34
gyrA 8199 p.Ser300Ala missense_variant 0.34
gyrA 8207 c.906T>C synonymous_variant 0.37
gyrA 8219 c.918T>C synonymous_variant 0.35
gyrA 8225 c.924T>C synonymous_variant 0.17
gyrA 8253 p.Ile318Leu missense_variant 0.2
gyrA 8267 c.966G>C synonymous_variant 0.57
gyrA 8283 p.Ile328Leu missense_variant 0.67
gyrA 8288 c.987T>C synonymous_variant 0.7
gyrA 8294 c.993T>C synonymous_variant 0.73
gyrA 8324 c.1023T>C synonymous_variant 0.67
gyrA 8327 c.1026C>G synonymous_variant 0.67
gyrA 8339 c.1038A>G synonymous_variant 0.7
gyrA 8342 c.1041G>C synonymous_variant 0.73
gyrA 8354 c.1053G>C synonymous_variant 0.7
gyrA 8357 c.1056G>T synonymous_variant 0.67
gyrA 8367 c.1066C>T synonymous_variant 0.59
gyrA 8372 c.1071G>C synonymous_variant 0.57
gyrA 8375 c.1074G>C synonymous_variant 0.52
gyrA 8391 p.Tyr364His missense_variant 0.44
gyrA 8399 c.1098T>C synonymous_variant 0.4
gyrA 8400 p.Asp367Asn missense_variant 0.4
gyrA 8408 c.1107A>G synonymous_variant 0.48
gyrA 8420 c.1119T>C synonymous_variant 0.48
gyrA 8423 c.1122G>T synonymous_variant 0.48
gyrA 8433 p.Thr378Arg missense_variant 0.37
gyrA 8442 c.1141C>T synonymous_variant 0.46
gyrA 8453 c.1152A>C synonymous_variant 0.52
gyrA 8459 c.1158G>A synonymous_variant 0.46
gyrA 8462 c.1161A>G synonymous_variant 0.46
gyrA 8471 c.1170T>C synonymous_variant 0.43
gyrA 8480 c.1179C>T synonymous_variant 0.35
gyrA 8486 c.1185T>C synonymous_variant 0.33
gyrA 8489 c.1188A>G synonymous_variant 0.33
gyrA 8492 c.1191G>C synonymous_variant 0.35
gyrA 8501 c.1200G>A synonymous_variant 0.37
gyrA 8504 c.1203G>C synonymous_variant 0.37
gyrA 8513 c.1212C>G synonymous_variant 0.35
gyrA 8516 c.1215T>C synonymous_variant 0.33
gyrA 8519 c.1218A>G synonymous_variant 0.33
gyrA 8520 c.1219C>T synonymous_variant 0.33
gyrA 8588 p.Glu429Asp missense_variant 0.6
gyrA 8597 c.1296C>G synonymous_variant 0.71
gyrA 8603 c.1302A>G synonymous_variant 0.72
gyrA 8619 c.1318T>C synonymous_variant 0.85
gyrA 8624 c.1323G>C synonymous_variant 0.86
gyrA 8636 c.1335A>C synonymous_variant 0.87
gyrA 8645 c.1344C>G synonymous_variant 0.84
gyrA 8655 p.Ile452Val missense_variant 0.85
gyrA 8672 c.1371A>G synonymous_variant 0.82
gyrA 8693 c.1392T>C synonymous_variant 0.74
gyrA 8696 c.1395G>C synonymous_variant 0.72
gyrA 8699 c.1398A>G synonymous_variant 0.74
gyrA 8711 c.1410A>C synonymous_variant 0.67
gyrA 8714 c.1413A>G synonymous_variant 0.66
gyrA 8720 c.1419G>A synonymous_variant 0.61
gyrA 8729 c.1428T>G synonymous_variant 0.46
gyrA 8731 p.Gly477Ala missense_variant 0.46
gyrA 8738 c.1437G>C synonymous_variant 0.36
gyrA 8741 c.1440C>T synonymous_variant 0.3
gyrA 8783 c.1482G>T synonymous_variant 0.26
gyrA 8786 c.1485T>C synonymous_variant 0.31
gyrA 8795 c.1494C>T synonymous_variant 0.57
gyrA 8796 p.Ile499Val missense_variant 0.43
gyrA 8813 c.1512C>T synonymous_variant 0.42
gyrA 8816 c.1515C>T synonymous_variant 0.41
gyrA 8817 p.Ser506Ala missense_variant 0.41
gyrA 8829 c.1528T>C synonymous_variant 0.52
gyrA 8852 c.1551T>C synonymous_variant 0.66
gyrA 8858 c.1557T>G synonymous_variant 0.67
gyrA 8867 c.1566A>G synonymous_variant 0.64
gyrA 8870 c.1569G>C synonymous_variant 0.65
gyrA 8873 c.1572A>C synonymous_variant 0.69
gyrA 8897 c.1596T>C synonymous_variant 0.61
gyrA 8903 c.1602T>C synonymous_variant 0.58
gyrA 8915 c.1614A>G synonymous_variant 0.67
gyrA 8924 c.1623C>T synonymous_variant 0.71
gyrA 8942 c.1641G>C synonymous_variant 0.66
gyrA 8945 c.1644G>C synonymous_variant 0.6
gyrA 8946 c.1645_1647delTTGinsCTC synonymous_variant 0.6
gyrA 8951 c.1650G>A synonymous_variant 0.64
gyrA 8967 p.Ala556Asn missense_variant 0.71
gyrA 8981 c.1680G>C synonymous_variant 0.78
gyrA 8987 c.1686C>G synonymous_variant 0.8
gyrA 8990 c.1689C>G synonymous_variant 0.8
gyrA 8996 c.1695T>C synonymous_variant 0.79
gyrA 8998 p.Leu566Trp missense_variant 0.8
gyrA 9023 c.1722A>C synonymous_variant 0.83
gyrA 9029 c.1728T>C synonymous_variant 0.79
gyrA 9035 c.1734G>C synonymous_variant 0.78
gyrA 9044 c.1743C>A synonymous_variant 0.77
gyrA 9051 c.1750T>C synonymous_variant 0.77
gyrA 9056 c.1755C>T synonymous_variant 0.74
gyrA 9062 c.1761C>G synonymous_variant 0.72
gyrA 9065 c.1764C>G synonymous_variant 0.74
gyrA 9068 c.1767G>C synonymous_variant 0.74
gyrA 9071 c.1770G>C synonymous_variant 0.71
gyrA 9080 c.1779G>C synonymous_variant 0.7
gyrA 9092 c.1791C>G synonymous_variant 0.66
gyrA 9101 c.1800A>G synonymous_variant 0.52
gyrA 9104 c.1803C>G synonymous_variant 0.5
gyrA 9119 c.1818A>G synonymous_variant 0.32
gyrA 9161 c.1860C>G synonymous_variant 0.38
gyrA 9182 c.1881T>C synonymous_variant 0.62
gyrA 9188 c.1887C>T synonymous_variant 0.57
gyrA 9197 c.1896G>C synonymous_variant 0.63
gyrA 9200 c.1899A>G synonymous_variant 0.67
gyrA 9207 p.Lys636Arg missense_variant 0.67
gyrA 9213 p.Thr638Val missense_variant 0.67
gyrA 9230 c.1929T>C synonymous_variant 0.72
gyrA 9236 c.1935G>C synonymous_variant 0.67
gyrA 9239 c.1938C>T synonymous_variant 0.63
gyrA 9242 c.1941A>C synonymous_variant 0.63
gyrA 9248 c.1947G>C synonymous_variant 0.68
gyrA 9257 c.1956C>T synonymous_variant 0.64
gyrA 9267 p.Asn656Gly missense_variant 0.6
gyrA 9278 c.1977G>T synonymous_variant 0.63
gyrA 9284 c.1983T>A synonymous_variant 0.63
gyrA 9287 c.1986G>C synonymous_variant 0.63
gyrA 9300 p.Ala667Ser missense_variant 0.6
gyrA 9304 p.Gly668Asp missense_variant 1.0
gyrA 9320 c.2019G>T synonymous_variant 0.54
gyrA 9332 p.Asn677Lys missense_variant 0.69
gyrA 9341 c.2040C>G synonymous_variant 0.74
gyrA 9345 c.2044A>C synonymous_variant 0.77
gyrA 9356 c.2055G>A synonymous_variant 0.81
gyrA 9368 c.2067G>A synonymous_variant 0.69
gyrA 9369 c.2068C>T synonymous_variant 0.67
gyrA 9374 c.2073G>C synonymous_variant 0.67
gyrA 9377 c.2076A>G synonymous_variant 0.67
gyrA 9383 c.2082T>G synonymous_variant 0.67
gyrA 9386 c.2085T>C synonymous_variant 0.67
gyrA 9389 c.2088C>G synonymous_variant 0.69
gyrA 9398 c.2097T>C synonymous_variant 0.69
gyrA 9419 c.2118T>C synonymous_variant 0.59
gyrA 9420 p.Ile707Ala missense_variant 0.57
gyrA 9429 p.Arg710Ala missense_variant 0.6
gyrA 9449 c.2148C>G synonymous_variant 0.25
fgd1 491022 c.240C>G synonymous_variant 0.35
fgd1 491031 c.249C>G synonymous_variant 0.44
fgd1 491034 c.252C>G synonymous_variant 0.42
fgd1 491037 c.255C>G synonymous_variant 0.45
fgd1 491043 c.261T>G synonymous_variant 0.57
fgd1 491049 c.267T>G synonymous_variant 0.57
fgd1 491055 c.273C>G synonymous_variant 0.54
fgd1 491064 c.282A>C synonymous_variant 0.57
fgd1 491067 c.285C>T synonymous_variant 0.57
fgd1 491073 c.291C>T synonymous_variant 0.57
fgd1 491082 c.300T>G synonymous_variant 0.59
fgd1 491083 p.Val101Ile missense_variant 0.59
fgd1 491091 c.309T>C synonymous_variant 0.6
fgd1 491094 c.312C>G synonymous_variant 0.6
fgd1 491115 c.333G>C synonymous_variant 0.58
fgd1 491121 c.339A>G synonymous_variant 0.54
fgd1 491133 c.351A>G synonymous_variant 0.52
fgd1 491144 p.Ala121Asp missense_variant 0.44
fgd1 491154 c.372G>A synonymous_variant 0.35
fgd1 491166 c.384G>C synonymous_variant 0.26
fgd1 491172 c.390C>A synonymous_variant 0.22
fgd1 491491 p.Pro237Thr missense_variant 0.61
fgd1 491496 c.714C>T synonymous_variant 0.66
fgd1 491508 c.726A>C synonymous_variant 0.71
fgd1 491509 c.727T>C synonymous_variant 0.71
fgd1 491512 p.Asn244Glu missense_variant 0.74
fgd1 491521 c.739C>A synonymous_variant 0.72
fgd1 491526 c.744T>C synonymous_variant 0.68
fgd1 491532 c.750G>A synonymous_variant 0.67
fgd1 491542 c.760T>C synonymous_variant 0.67
fgd1 491547 c.765A>G synonymous_variant 0.72
fgd1 491550 c.768T>C synonymous_variant 0.73
fgd1 491563 c.781_782delAGinsTC synonymous_variant 0.75
fgd1 491595 c.813C>G synonymous_variant 0.72
fgd1 491601 c.819T>C synonymous_variant 0.7
fgd1 491603 p.Ala274Glu missense_variant 0.69
fgd1 491605 c.823C>T synonymous_variant 0.7
fgd1 491610 c.828A>C synonymous_variant 0.7
fgd1 491616 c.834A>G synonymous_variant 0.67
fgd1 491620 p.Ile280Val missense_variant 0.67
fgd1 491640 c.858G>C synonymous_variant 0.6
fgd1 491652 c.870C>G synonymous_variant 0.44
fgd1 491658 c.876A>G synonymous_variant 0.41
fgd1 491667 c.885A>G synonymous_variant 0.28
mshA 575656 c.309G>C synonymous_variant 0.35
mshA 575659 c.312A>G synonymous_variant 0.36
mshA 575665 c.318G>T synonymous_variant 0.54
mshA 575686 c.339G>C synonymous_variant 0.64
mshA 575689 c.342G>C synonymous_variant 0.64
mshA 575695 c.348C>G synonymous_variant 0.64
mshA 575704 c.357T>G synonymous_variant 0.63
mshA 575705 c.358_360delTTGinsCTC synonymous_variant 0.63
mshA 575732 c.385_387delCTTinsTTG synonymous_variant 0.65
mshA 575737 c.390T>C synonymous_variant 0.66
mshA 575744 p.Ala133Thr missense_variant 0.64
mshA 575749 c.402C>G synonymous_variant 0.61
mshA 575756 c.409C>T synonymous_variant 0.59
mshA 575761 c.414C>G synonymous_variant 0.56
mshA 575779 c.432A>G synonymous_variant 0.24
mshA 575782 c.435G>C synonymous_variant 0.25
mshA 575785 c.438T>C synonymous_variant 0.29
mshA 575795 p.Ile150Val missense_variant 0.52
mshA 575800 c.453G>C synonymous_variant 0.61
mshA 575803 c.456C>T synonymous_variant 0.66
mshA 575818 c.471G>C synonymous_variant 0.7
mshA 575821 c.474G>C synonymous_variant 0.69
mshA 575830 c.483C>G synonymous_variant 0.75
mshA 575842 c.495G>C synonymous_variant 0.75
mshA 575864 c.517T>C synonymous_variant 0.79
mshA 575878 c.531A>G synonymous_variant 0.8
mshA 575893 c.546C>G synonymous_variant 0.84
mshA 575896 c.549G>C synonymous_variant 0.83
mshA 575905 c.558G>C synonymous_variant 0.78
mshA 575908 c.561A>T synonymous_variant 0.79
mshA 575911 c.564G>C synonymous_variant 0.82
mshA 575917 p.Asp190Glu missense_variant 0.82
mshA 575924 p.Gly193Ser missense_variant 0.79
mshA 575932 c.585G>A synonymous_variant 0.74
mshA 575935 c.588G>T synonymous_variant 0.75
mshA 575944 c.597T>C synonymous_variant 0.71
mshA 575945 p.Thr200Ala missense_variant 0.69
mshA 575965 c.618C>G synonymous_variant 0.67
mshA 575977 c.630G>C synonymous_variant 0.55
mshA 575980 c.633T>C synonymous_variant 0.5
mshA 576001 p.Asp218Glu missense_variant 0.2
mshA 576154 c.807C>G synonymous_variant 0.2
mshA 576163 c.816A>C synonymous_variant 0.47
mshA 576184 c.837A>G synonymous_variant 0.5
mshA 576193 c.846T>C synonymous_variant 0.45
mshA 576195 p.Val283Ala missense_variant 0.45
mshA 576205 c.858G>C synonymous_variant 0.45
mshA 576214 c.867G>A synonymous_variant 0.48
mshA 576220 c.873C>G synonymous_variant 0.45
mshA 576223 c.876G>C synonymous_variant 0.43
mshA 576230 p.Ile295Val missense_variant 0.39
mshA 576233 p.Ile296Leu missense_variant 0.39
mshA 576241 c.894C>G synonymous_variant 0.43
ccsA 620311 p.Leu141Val missense_variant 0.19
ccsA 620316 c.426G>C synonymous_variant 0.22
ccsA 620319 c.429C>T synonymous_variant 0.33
ccsA 620325 c.435G>T synonymous_variant 0.39
ccsA 620337 c.447C>G synonymous_variant 0.44
ccsA 620340 c.450C>G synonymous_variant 0.44
ccsA 620343 c.453G>C synonymous_variant 0.46
ccsA 620349 c.459A>C synonymous_variant 0.48
ccsA 620352 c.462C>T synonymous_variant 0.5
ccsA 620362 p.Ala158Thr missense_variant 0.57
ccsA 620367 c.477T>C synonymous_variant 0.61
ccsA 620373 c.483C>A synonymous_variant 0.65
ccsA 620385 c.495G>C synonymous_variant 0.72
ccsA 620388 c.498A>G synonymous_variant 0.72
ccsA 620412 c.522T>C synonymous_variant 0.62
ccsA 620415 c.525T>C synonymous_variant 0.62
ccsA 620418 c.528G>C synonymous_variant 0.62
ccsA 620436 c.546T>C synonymous_variant 0.59
ccsA 620439 c.549T>G synonymous_variant 0.57
ccsA 620442 c.552G>C synonymous_variant 0.55
ccsA 620445 c.555A>G synonymous_variant 0.55
ccsA 620466 c.576C>G synonymous_variant 0.46
ccsA 620583 c.693G>C synonymous_variant 0.53
ccsA 620598 c.708C>G synonymous_variant 0.55
ccsA 620604 c.714C>G synonymous_variant 0.55
ccsA 620607 c.717T>G synonymous_variant 0.55
ccsA 620613 c.723C>G synonymous_variant 0.57
ccsA 620616 c.726C>T synonymous_variant 0.57
ccsA 620619 c.729G>C synonymous_variant 0.55
ccsA 620622 c.732G>C synonymous_variant 0.5
ccsA 620625 c.735A>C synonymous_variant 0.52
ccsA 620631 c.741T>C synonymous_variant 0.54
ccsA 620634 c.744C>G synonymous_variant 0.6
ccsA 620646 c.756G>A synonymous_variant 0.67
ccsA 620652 c.762C>G synonymous_variant 0.7
ccsA 620661 c.771C>G synonymous_variant 0.71
ccsA 620685 c.795G>A synonymous_variant 0.65
ccsA 620694 c.804C>G synonymous_variant 0.62
ccsA 620698 p.Val270Ile missense_variant 0.62
ccsA 620703 c.813G>C synonymous_variant 0.61
ccsA 620709 c.819G>C synonymous_variant 0.6
ccsA 620712 c.822G>C synonymous_variant 0.6
ccsA 620718 c.828G>C synonymous_variant 0.61
ccsA 620724 c.834C>T synonymous_variant 0.62
ccsA 620736 c.846G>T synonymous_variant 0.5
ccsA 620739 c.849A>G synonymous_variant 0.48
ccsA 620745 c.855G>C synonymous_variant 0.38
rpoB 760060 p.Tyr85Ser missense_variant 0.27
rpoB 760068 c.262_264delTCTinsAGC synonymous_variant 0.27
rpoB 760091 c.285G>C synonymous_variant 0.67
rpoB 760101 c.295T>C synonymous_variant 0.74
rpoB 760106 c.300G>C synonymous_variant 0.72
rpoB 760112 c.306T>C synonymous_variant 0.71
rpoB 760115 c.309C>T synonymous_variant 0.71
rpoB 760118 c.312T>G synonymous_variant 0.7
rpoB 760121 c.315T>C synonymous_variant 0.7
rpoB 760130 p.Asp108Glu missense_variant 0.67
rpoB 760139 c.333A>C synonymous_variant 0.68
rpoB 760142 c.336C>G synonymous_variant 0.68
rpoB 760181 c.375T>C synonymous_variant 0.77
rpoB 760184 c.378A>G synonymous_variant 0.77
rpoB 760196 c.390C>G synonymous_variant 0.78
rpoB 760235 c.429T>C synonymous_variant 0.86
rpoB 760244 c.438G>C synonymous_variant 0.86
rpoB 760253 c.447T>C synonymous_variant 0.84
rpoB 760283 c.477G>C synonymous_variant 0.86
rpoB 760298 c.492G>C synonymous_variant 0.85
rpoB 760310 c.504G>C synonymous_variant 0.85
rpoB 760316 c.510C>G synonymous_variant 0.85
rpoB 760323 c.517C>T synonymous_variant 0.86
rpoB 760328 c.522G>C synonymous_variant 0.86
rpoB 760331 c.525G>C synonymous_variant 0.86
rpoB 760337 c.531C>G synonymous_variant 0.86
rpoB 760340 c.534G>C synonymous_variant 0.86
rpoB 760343 c.537G>C synonymous_variant 0.86
rpoB 760357 p.Thr184Ser missense_variant 0.82
rpoB 760361 c.555T>C synonymous_variant 0.8
rpoB 760370 c.564C>G synonymous_variant 0.8
rpoB 760376 p.Asp190Glu missense_variant 0.79
rpoB 760407 p.Ser201Gly missense_variant 0.8
rpoB 760415 c.609C>T synonymous_variant 0.8
rpoB 760424 c.618C>G synonymous_variant 0.8
rpoB 760430 c.624T>C synonymous_variant 0.82
rpoB 760457 c.651C>T synonymous_variant 0.73
rpoB 760475 c.669A>G synonymous_variant 0.7
rpoB 760481 c.675G>T synonymous_variant 0.63
rpoB 760484 c.678A>G synonymous_variant 0.64
rpoB 760493 c.687C>T synonymous_variant 0.67
rpoB 760511 c.705G>C synonymous_variant 0.68
rpoB 760514 c.708C>T synonymous_variant 0.69
rpoB 760522 p.Ser239Asn missense_variant 0.69
rpoB 760532 c.726T>C synonymous_variant 0.62
rpoB 760533 p.Val243Thr missense_variant 0.62
rpoB 760541 c.735G>C synonymous_variant 0.72
rpoB 760547 c.741G>C synonymous_variant 0.78
rpoB 760563 p.Arg253Met missense_variant 0.82
rpoB 760591 p.Val262Ala missense_variant 0.75
rpoB 760601 c.795C>T synonymous_variant 0.75
rpoB 760611 c.805_807delTTGinsCTC synonymous_variant 0.79
rpoB 760629 c.823C>T synonymous_variant 0.83
rpoB 760640 c.834C>T synonymous_variant 0.84
rpoB 760646 c.840C>G synonymous_variant 0.85
rpoB 760655 c.849A>G synonymous_variant 0.84
rpoB 760661 c.855A>C synonymous_variant 0.83
rpoB 760670 c.864G>C synonymous_variant 0.8
rpoB 760674 c.868T>C synonymous_variant 0.8
rpoB 760679 c.873A>G synonymous_variant 0.82
rpoB 760683 c.877T>C synonymous_variant 0.81
rpoB 760730 c.924T>C synonymous_variant 0.47
rpoB 760916 c.1110C>T synonymous_variant 0.31
rpoB 760925 c.1119T>C synonymous_variant 0.38
rpoB 760928 c.1122G>C synonymous_variant 0.42
rpoB 760946 c.1140A>G synonymous_variant 0.62
rpoB 760965 p.Met387Leu missense_variant 0.67
rpoB 760970 c.1164G>C synonymous_variant 0.64
rpoB 760973 c.1167G>C synonymous_variant 0.64
rpoB 760982 c.1176G>C synonymous_variant 0.65
rpoB 760985 c.1179G>C synonymous_variant 0.64
rpoB 760988 c.1182C>G synonymous_variant 0.63
rpoB 760991 c.1185G>T synonymous_variant 0.69
rpoB 760997 c.1191G>C synonymous_variant 0.74
rpoB 761015 c.1209G>C synonymous_variant 0.73
rpoB 761036 c.1230G>C synonymous_variant 0.77
rpoB 761037 c.1231T>C synonymous_variant 0.77
rpoB 761054 c.1248G>C synonymous_variant 0.78
rpoB 761057 c.1251G>C synonymous_variant 0.77
rpoB 761060 c.1254C>G synonymous_variant 0.75
rpoB 761063 c.1257C>G synonymous_variant 0.76
rpoB 761097 c.1291_1293delAGCinsTCG synonymous_variant 0.72
rpoB 761102 c.1296A>G synonymous_variant 0.73
rpoB 761126 c.1320G>C synonymous_variant 0.75
rpoB 761132 c.1326G>C synonymous_variant 0.7
rpoB 761133 c.1327T>C synonymous_variant 0.71
rpoB 761150 c.1344A>C synonymous_variant 0.63
rpoB 761165 c.1359G>C synonymous_variant 0.66
rpoB 761180 c.1374A>C synonymous_variant 0.59
rpoB 761189 c.1383T>C synonymous_variant 0.45
rpoB 761195 c.1389G>C synonymous_variant 0.38
rpoB 761198 c.1392G>C synonymous_variant 0.39
rpoB 761207 c.1401C>T synonymous_variant 0.28
rpoB 761234 c.1428G>C synonymous_variant 0.34
rpoB 761249 c.1443A>G synonymous_variant 0.39
rpoB 761252 c.1446C>T synonymous_variant 0.39
rpoB 761255 c.1449T>G synonymous_variant 0.39
rpoB 761258 c.1452G>A synonymous_variant 0.43
rpoB 761261 c.1455G>C synonymous_variant 0.43
rpoB 761264 c.1458C>G synonymous_variant 0.43
rpoB 761273 c.1467T>C synonymous_variant 0.41
rpoB 761282 c.1476C>T synonymous_variant 0.41
rpoB 761318 c.1512G>C synonymous_variant 0.63
rpoB 761327 c.1521A>G synonymous_variant 0.5
rpoB 761333 c.1527G>C synonymous_variant 0.48
rpoB 761345 c.1539G>C synonymous_variant 0.41
rpoB 761346 p.Val514Lys missense_variant 0.41
rpoB 761354 c.1548C>T synonymous_variant 0.39
rpoB 761357 c.1551G>C synonymous_variant 0.38
rpoB 761360 c.1554T>C synonymous_variant 0.38
rpoB 761362 p.Ser519Thr missense_variant 0.39
rpoB 761369 p.Glu521Asp missense_variant 0.5
rpoB 761374 p.Val523Glu missense_variant 0.53
rpoB 761408 c.1602G>C synonymous_variant 0.51
rpoB 761414 c.1608A>G synonymous_variant 0.48
rpoB 761423 c.1617T>C synonymous_variant 0.52
rpoB 761435 c.1629T>C synonymous_variant 0.54
rpoB 761437 p.Ala544Glu missense_variant 0.52
rpoB 761439 p.Asp545Asn missense_variant 0.52
rpoB 761444 c.1638T>C synonymous_variant 0.52
rpoB 761457 p.Pro551Asp missense_variant 0.45
rpoB 761471 c.1665C>T synonymous_variant 0.25
rpoB 761474 c.1668C>A synonymous_variant 0.2
rpoB 761537 c.1731C>G synonymous_variant 0.54
rpoB 761555 c.1749G>C synonymous_variant 0.62
rpoB 761558 c.1752C>G synonymous_variant 0.62
rpoB 761561 c.1755C>G synonymous_variant 0.62
rpoB 761564 c.1758G>C synonymous_variant 0.64
rpoB 761570 c.1764T>C synonymous_variant 0.64
rpoB 761573 c.1767C>G synonymous_variant 0.68
rpoB 761579 c.1773G>C synonymous_variant 0.71
rpoB 761606 c.1800C>G synonymous_variant 0.78
rpoB 761612 c.1806G>T synonymous_variant 0.8
rpoB 761615 c.1809A>C synonymous_variant 0.79
rpoB 761636 c.1830G>T synonymous_variant 0.79
rpoB 761648 c.1842T>C synonymous_variant 0.74
rpoB 761661 c.1855C>T synonymous_variant 0.74
rpoB 761666 c.1860G>C synonymous_variant 0.75
rpoB 761675 c.1869G>T synonymous_variant 0.71
rpoB 761690 c.1884G>C synonymous_variant 0.66
rpoB 761718 p.Ala638Ser missense_variant 0.49
rpoB 761732 c.1926C>T synonymous_variant 0.42
rpoB 761735 c.1929C>G synonymous_variant 0.42
rpoB 761736 p.Ile644Val missense_variant 0.42
rpoB 761747 c.1941G>C synonymous_variant 0.63
rpoB 761765 c.1959T>C synonymous_variant 0.64
rpoB 761772 p.His656Ala missense_variant 0.58
rpoB 761778 p.Asn658Asp missense_variant 0.65
rpoB 761786 c.1980C>T synonymous_variant 0.62
rpoB 761791 p.Arg662His missense_variant 0.62
rpoB 761813 c.2007T>C synonymous_variant 0.64
rpoB 761816 c.2010C>A synonymous_variant 0.61
rpoB 761819 c.2013G>T synonymous_variant 0.62
rpoB 761822 c.2016C>G synonymous_variant 0.62
rpoB 761834 c.2028T>C synonymous_variant 0.62
rpoB 761847 p.Cys681Arg missense_variant 0.38
rpoB 761852 c.2046C>G synonymous_variant 0.3
rpoB 761858 c.2052G>C synonymous_variant 0.26
rpoB 761864 c.2058G>C synonymous_variant 0.26
rpoB 761868 p.Asp688Gln missense_variant 0.25
rpoB 761873 c.2067A>T synonymous_variant 0.27
rpoB 761882 c.2076C>G synonymous_variant 0.42
rpoB 761891 c.2085G>C synonymous_variant 0.44
rpoB 761903 c.2097T>G synonymous_variant 0.38
rpoB 761906 c.2100C>G synonymous_variant 0.4
rpoB 761909 c.2103T>C synonymous_variant 0.42
rpoB 761912 c.2106T>C synonymous_variant 0.42
rpoB 761915 p.Asp703Glu missense_variant 0.42
rpoB 761916 p.Asp704Asn missense_variant 0.48
rpoB 761921 c.2115C>T synonymous_variant 0.52
rpoB 761948 c.2142G>C synonymous_variant 0.73
rpoB 761954 c.2148C>G synonymous_variant 0.74
rpoB 761972 c.2166C>T synonymous_variant 0.79
rpoB 761999 c.2193G>C synonymous_variant 0.82
rpoB 762014 c.2208C>G synonymous_variant 0.86
rpoB 762038 c.2232C>T synonymous_variant 0.85
rpoB 762053 c.2247T>C synonymous_variant 0.84
rpoB 762062 c.2256T>C synonymous_variant 0.81
rpoB 762065 c.2259T>C synonymous_variant 0.81
rpoB 762083 c.2277T>C synonymous_variant 0.8
rpoB 762086 c.2280G>C synonymous_variant 0.78
rpoB 762098 c.2292C>T synonymous_variant 0.79
rpoB 762101 c.2295C>G synonymous_variant 0.79
rpoB 762114 p.Ile770Val missense_variant 0.76
rpoB 762122 c.2316C>T synonymous_variant 0.79
rpoB 762131 c.2325C>G synonymous_variant 0.79
rpoB 762140 c.2334G>C synonymous_variant 0.79
rpoB 762143 c.2337T>C synonymous_variant 0.82
rpoB 762149 c.2343G>C synonymous_variant 0.86
rpoB 762158 c.2352G>C synonymous_variant 0.87
rpoB 762167 c.2361T>C synonymous_variant 0.85
rpoB 762176 c.2370T>C synonymous_variant 0.85
rpoB 762185 c.2379G>C synonymous_variant 0.86
rpoB 762218 c.2412T>C synonymous_variant 0.86
rpoB 762233 c.2427G>C synonymous_variant 0.8
rpoB 762251 c.2445G>C synonymous_variant 0.73
rpoB 762254 c.2448T>C synonymous_variant 0.72
rpoB 762257 c.2451C>G synonymous_variant 0.71
rpoB 762275 c.2469C>G synonymous_variant 0.7
rpoB 762284 c.2478G>C synonymous_variant 0.67
rpoB 762293 c.2487T>G synonymous_variant 0.6
rpoB 762299 c.2493G>C synonymous_variant 0.57
rpoB 762314 c.2508C>T synonymous_variant 0.5
rpoB 762317 c.2511A>G synonymous_variant 0.48
rpoB 762329 c.2523G>C synonymous_variant 0.35
rpoB 762359 c.2553C>T synonymous_variant 0.53
rpoB 762362 p.Glu852Asp missense_variant 0.55
rpoB 762369 c.2563T>C synonymous_variant 0.64
rpoC 762374 c.-996G>C upstream_gene_variant 0.64
rpoC 762380 c.-990T>C upstream_gene_variant 0.67
rpoC 762390 c.-980C>T upstream_gene_variant 0.59
rpoC 762395 c.-975G>C upstream_gene_variant 0.59
rpoC 762398 c.-972T>C upstream_gene_variant 0.59
rpoC 762401 c.-969G>C upstream_gene_variant 0.59
rpoC 762404 c.-966T>C upstream_gene_variant 0.62
rpoC 762407 c.-963G>C upstream_gene_variant 0.57
rpoC 762410 c.-960T>G upstream_gene_variant 0.57
rpoC 762416 c.-954A>G upstream_gene_variant 0.62
rpoC 762449 c.-921C>A upstream_gene_variant 0.73
rpoC 762452 c.-918G>C upstream_gene_variant 0.75
rpoC 762470 c.-900G>C upstream_gene_variant 0.78
rpoC 762482 c.-888C>T upstream_gene_variant 0.73
rpoC 762488 c.-882G>C upstream_gene_variant 0.76
rpoC 762491 c.-879T>C upstream_gene_variant 0.77
rpoC 762503 c.-867G>C upstream_gene_variant 0.79
rpoC 762509 c.-861T>G upstream_gene_variant 0.77
rpoB 762510 p.Ala902Pro missense_variant 0.78
rpoC 762533 c.-837T>C upstream_gene_variant 0.7
rpoC 762536 c.-834T>C upstream_gene_variant 0.71
rpoC 762537 c.-833T>C upstream_gene_variant 0.71
rpoC 762551 c.-819C>T upstream_gene_variant 0.68
rpoC 762560 c.-810A>T upstream_gene_variant 0.64
rpoC 762563 c.-807G>T upstream_gene_variant 0.61
rpoC 762575 c.-795C>T upstream_gene_variant 0.54
rpoC 762581 c.-789T>C upstream_gene_variant 0.45
rpoC 762582 c.-788T>C upstream_gene_variant 0.45
rpoC 762737 c.-633C>G upstream_gene_variant 0.27
rpoC 762749 c.-621C>T upstream_gene_variant 0.45
rpoC 762753 c.-617_-615delTTGinsCTC upstream_gene_variant 0.48
rpoB 762760 p.Cys985Ser missense_variant 0.58
rpoC 762782 c.-588T>C upstream_gene_variant 0.58
rpoB 762785 p.Asp993Glu missense_variant 0.59
rpoB 762786 p.Val994Thr missense_variant 0.59
rpoC 762791 c.-579G>C upstream_gene_variant 0.61
rpoB 762799 p.Ala998Glu missense_variant 0.61
rpoC 762812 c.-558C>G upstream_gene_variant 0.74
rpoC 762818 c.-552C>G upstream_gene_variant 0.76
rpoC 762827 c.-543G>T upstream_gene_variant 0.75
rpoC 762833 c.-537C>T upstream_gene_variant 0.77
rpoC 762836 c.-534C>T upstream_gene_variant 0.72
rpoC 762851 c.-519C>T upstream_gene_variant 0.74
rpoC 762857 c.-513C>G upstream_gene_variant 0.74
rpoC 762863 c.-507T>G upstream_gene_variant 0.74
rpoB 762879 p.Met1025Leu missense_variant 0.78
rpoC 762917 c.-453C>T upstream_gene_variant 0.83
rpoC 762929 c.-441G>T upstream_gene_variant 0.78
rpoC 762947 c.-423C>T upstream_gene_variant 0.78
rpoC 762962 c.-408C>T upstream_gene_variant 0.78
rpoC 762995 c.-375G>C upstream_gene_variant 0.8
rpoC 763004 c.-366G>A upstream_gene_variant 0.8
rpoC 763007 c.-363C>T upstream_gene_variant 0.82
rpoC 763028 c.-342T>C upstream_gene_variant 0.89
rpoC 763031 c.-339T>G upstream_gene_variant 0.9
rpoC 763034 c.-336C>G upstream_gene_variant 0.9
rpoC 763040 c.-330C>G upstream_gene_variant 0.91
rpoC 763070 c.-300T>C upstream_gene_variant 0.9
rpoC 763115 c.-255T>C upstream_gene_variant 0.85
rpoC 763127 c.-243G>C upstream_gene_variant 0.82
rpoC 763136 c.-234C>T upstream_gene_variant 0.76
rpoC 763139 c.-231C>T upstream_gene_variant 0.74
rpoC 763142 c.-228C>G upstream_gene_variant 0.72
rpoC 763158 c.-212C>T upstream_gene_variant 0.72
rpoC 763166 c.-204A>G upstream_gene_variant 0.74
rpoC 763172 c.-198G>C upstream_gene_variant 0.73
rpoC 763202 c.-168A>G upstream_gene_variant 0.54
rpoC 763205 c.-165G>T upstream_gene_variant 0.52
rpoC 763206 c.-164_-162delAGTinsTCG upstream_gene_variant 0.52
rpoC 763214 c.-156T>C upstream_gene_variant 0.5
rpoC 763217 c.-153G>C upstream_gene_variant 0.5
rpoC 763226 c.-144A>G upstream_gene_variant 0.5
rpoB 763227 p.Leu1141Met missense_variant 0.5
rpoB 763235 p.Glu1143Asp missense_variant 0.49
rpoB 763241 p.Glu1145Asp missense_variant 0.49
rpoC 763256 c.-114G>A upstream_gene_variant 0.41
rpoC 763259 c.-111G>C upstream_gene_variant 0.39
rpoC 763375 c.6C>A synonymous_variant 0.61
rpoC 763411 c.42T>C synonymous_variant 0.7
rpoC 763414 c.45T>C synonymous_variant 0.7
rpoC 763420 c.51G>C synonymous_variant 0.72
rpoC 763423 p.Glu18Asp missense_variant 0.72
rpoC 763429 c.60C>T synonymous_variant 0.74
rpoC 763430 c.61_63delAGGinsCGT synonymous_variant 0.72
rpoC 763435 c.66A>G synonymous_variant 0.73
rpoC 763444 c.75T>C synonymous_variant 0.76
rpoC 763456 c.87A>G synonymous_variant 0.79
rpoC 763468 c.99G>C synonymous_variant 0.82
rpoC 763486 c.117T>G synonymous_variant 0.81
rpoC 763528 c.159G>A synonymous_variant 0.86
rpoC 763546 c.177A>G synonymous_variant 0.86
rpoC 763570 c.201G>C synonymous_variant 0.83
rpoC 763573 c.204G>C synonymous_variant 0.84
rpoC 763594 c.225C>T synonymous_variant 0.84
rpoC 763633 c.264T>C synonymous_variant 0.76
rpoC 763639 c.270G>A synonymous_variant 0.76
rpoC 763660 c.291T>G synonymous_variant 0.82
rpoC 763675 c.306C>G synonymous_variant 0.78
rpoC 763708 c.339G>T synonymous_variant 0.8
rpoC 763714 c.345G>C synonymous_variant 0.8
rpoC 763720 c.351G>C synonymous_variant 0.8
rpoC 763723 c.354G>C synonymous_variant 0.78
rpoC 763732 c.363C>G synonymous_variant 0.79
rpoC 763741 c.372C>T synonymous_variant 0.77
rpoC 763744 c.375G>C synonymous_variant 0.78
rpoC 763765 c.396T>C synonymous_variant 0.76
rpoC 763774 c.405G>C synonymous_variant 0.73
rpoC 763781 p.Ser138Ala missense_variant 0.72
rpoC 763792 p.Glu141Asp missense_variant 0.69
rpoC 763801 c.432C>T synonymous_variant 0.65
rpoC 763807 c.438T>C synonymous_variant 0.65
rpoC 763813 c.444C>G synonymous_variant 0.61
rpoC 763816 c.447C>G synonymous_variant 0.62
rpoC 763831 c.462A>G synonymous_variant 0.57
rpoC 763837 c.468G>C synonymous_variant 0.54
rpoC 763900 c.531G>C synonymous_variant 0.41
rpoC 763925 p.Ala186Lys missense_variant 0.53
rpoC 763930 c.561G>A synonymous_variant 0.54
rpoC 763940 p.Ala191Ser missense_variant 0.51
rpoC 763945 c.576T>C synonymous_variant 0.5
rpoC 763947 p.Ala193Val missense_variant 0.51
rpoC 763951 c.582G>C synonymous_variant 0.54
rpoC 763960 c.591T>G synonymous_variant 0.62
rpoC 763972 c.603C>T synonymous_variant 0.67
rpoC 763996 c.627T>C synonymous_variant 0.68
rpoC 764002 c.633C>G synonymous_variant 0.66
rpoC 764005 c.636G>C synonymous_variant 0.66
rpoC 764011 c.642T>C synonymous_variant 0.66
rpoC 764024 c.655_657delTTGinsCTC synonymous_variant 0.6
rpoC 764032 p.Asp221Glu missense_variant 0.61
rpoC 764040 p.Ser224Asn missense_variant 0.68
rpoC 764044 c.675T>C synonymous_variant 0.7
rpoC 764071 c.702G>C synonymous_variant 0.68
rpoC 764083 c.714A>G synonymous_variant 0.67
rpoC 764084 p.Asn239Val missense_variant 0.6
rpoC 764095 c.726C>G synonymous_variant 0.69
rpoC 764101 c.732C>G synonymous_variant 0.69
rpoC 764102 p.Val245Gln missense_variant 0.69
rpoC 764126 p.Thr253Ala missense_variant 0.66
rpoC 764134 c.765C>G synonymous_variant 0.65
rpoC 764140 c.771C>T synonymous_variant 0.5
rpoC 764143 c.774G>C synonymous_variant 0.42
rpoC 764147 p.Ser260Ala missense_variant 0.36
rpoC 764153 p.Gln262Lys missense_variant 0.4
rpoC 764161 c.792G>C synonymous_variant 0.6
rpoC 764179 c.810C>T synonymous_variant 0.74
rpoC 764182 p.Asp271Glu missense_variant 0.75
rpoC 764188 c.819A>G synonymous_variant 0.76
rpoC 764195 p.Ser276Glu missense_variant 0.78
rpoC 764203 c.834G>T synonymous_variant 0.77
rpoC 764206 p.Asp279Glu missense_variant 0.77
rpoC 764239 c.870T>C synonymous_variant 0.84
rpoC 764245 c.876C>G synonymous_variant 0.83
rpoC 764248 c.879C>G synonymous_variant 0.82
rpoC 764257 c.888G>C synonymous_variant 0.84
rpoC 764266 c.897T>C synonymous_variant 0.83
rpoC 764269 c.900G>C synonymous_variant 0.82
rpoC 764278 c.909A>G synonymous_variant 0.79
rpoC 764285 p.Gly306Ser missense_variant 0.82
rpoC 764317 c.948C>G synonymous_variant 0.82
rpoC 764320 c.951C>T synonymous_variant 0.81
rpoC 764329 c.960C>T synonymous_variant 0.79
rpoC 764365 c.996C>T synonymous_variant 0.68
rpoC 764383 c.1014C>G synonymous_variant 0.61
rpoC 764386 c.1017C>T synonymous_variant 0.55
rpoC 764387 c.1018_1020delTTGinsCTC synonymous_variant 0.58
rpoC 764392 c.1023C>T synonymous_variant 0.56
rpoC 764395 c.1026C>T synonymous_variant 0.59
rpoC 764405 c.1036_1038delAGGinsCGC synonymous_variant 0.68
rpoC 764410 c.1041G>C synonymous_variant 0.69
rpoC 764431 c.1062G>C synonymous_variant 0.7
rpoC 764434 c.1065A>G synonymous_variant 0.72
rpoC 764446 c.1077T>C synonymous_variant 0.68
rpoC 764449 c.1080G>C synonymous_variant 0.69
rpoC 764452 c.1083T>C synonymous_variant 0.71
rpoC 764458 c.1089G>C synonymous_variant 0.72
rpoC 764461 c.1092A>G synonymous_variant 0.77
rpoC 764485 c.1116G>C synonymous_variant 0.82
rpoC 764491 c.1122G>T synonymous_variant 0.84
rpoC 764497 c.1128A>G synonymous_variant 0.82
rpoC 764500 c.1131C>G synonymous_variant 0.83
rpoC 764521 c.1152T>C synonymous_variant 0.89
rpoC 764536 c.1167G>T synonymous_variant 0.91
rpoC 764539 c.1170C>G synonymous_variant 0.91
rpoC 764548 c.1179G>A synonymous_variant 0.93
rpoC 764575 c.1206T>G synonymous_variant 0.9
rpoC 764578 c.1209C>G synonymous_variant 0.9
rpoC 764585 c.1216_1218delCTCinsTTG synonymous_variant 0.9
rpoC 764611 c.1242G>C synonymous_variant 0.87
rpoC 764632 c.1263T>C synonymous_variant 0.89
rpoC 764644 c.1275G>C synonymous_variant 0.9
rpoC 764650 c.1281G>T synonymous_variant 0.88
rpoC 764701 c.1332C>G synonymous_variant 0.9
rpoC 764713 c.1344G>C synonymous_variant 0.9
rpoC 764716 c.1347G>C synonymous_variant 0.9
rpoC 764746 c.1377G>T synonymous_variant 0.88
rpoC 764755 c.1386C>T synonymous_variant 0.89
rpoC 764791 c.1422C>A synonymous_variant 0.85
rpoC 764797 c.1428G>C synonymous_variant 0.85
rpoC 764803 c.1434C>T synonymous_variant 0.84
rpoC 764809 c.1440C>T synonymous_variant 0.83
rpoC 764812 c.1443C>G synonymous_variant 0.81
rpoC 764815 c.1446A>G synonymous_variant 0.79
rpoC 764824 c.1455T>C synonymous_variant 0.78
rpoC 764827 c.1458G>C synonymous_variant 0.78
rpoC 764858 c.1489T>C synonymous_variant 0.79
rpoC 764869 c.1500C>T synonymous_variant 0.78
rpoC 764875 c.1506C>G synonymous_variant 0.7
rpoC 764878 c.1509C>G synonymous_variant 0.68
rpoC 764887 c.1518G>C synonymous_variant 0.6
rpoC 764888 c.1519_1521delTTGinsCTC synonymous_variant 0.6
rpoC 764893 c.1524T>C synonymous_variant 0.63
rpoC 764911 c.1542A>G synonymous_variant 0.66
rpoC 764912 p.Met515Gln missense_variant 0.66
rpoC 764923 c.1554A>G synonymous_variant 0.66
rpoC 764948 c.1579T>C synonymous_variant 0.6
rpoC 764956 c.1587T>C synonymous_variant 0.58
rpoC 764968 c.1599T>C synonymous_variant 0.59
rpoC 764995 c.1626C>G synonymous_variant 0.38
rpoC 764998 c.1629G>T synonymous_variant 0.58
rpoC 765004 c.1635G>T synonymous_variant 0.42
rpoC 765007 c.1638T>G synonymous_variant 0.42
rpoC 765008 c.1639T>C synonymous_variant 0.42
rpoC 765011 c.1642_1644delAGCinsTCG synonymous_variant 0.43
rpoC 765016 c.1647C>G synonymous_variant 0.43
rpoC 765019 c.1650A>G synonymous_variant 0.48
rpoC 765040 c.1671T>C synonymous_variant 0.64
rpoC 765041 c.1672T>C synonymous_variant 0.64
rpoC 765047 c.1678T>C synonymous_variant 0.64
rpoC 765052 c.1683C>G synonymous_variant 0.61
rpoC 765055 c.1686C>G synonymous_variant 0.61
rpoC 765076 c.1707A>G synonymous_variant 0.49
rpoC 765079 c.1710T>G synonymous_variant 0.44
rpoC 765082 c.1713G>T synonymous_variant 0.44
rpoC 765085 c.1716T>G synonymous_variant 0.42
rpoC 765103 c.1734G>T synonymous_variant 0.52
rpoC 765121 c.1752G>C synonymous_variant 0.45
rpoC 765397 c.2028G>T synonymous_variant 0.2
rpoC 765405 p.Leu679His missense_variant 0.24
rpoC 765409 c.2040T>A synonymous_variant 0.32
rpoC 765425 p.Lys686Glu missense_variant 0.59
rpoC 765445 c.2076G>C synonymous_variant 0.6
rpoC 765451 c.2082C>G synonymous_variant 0.63
rpoC 765452 p.Ala695Arg missense_variant 0.62
rpoC 765458 p.Ile697Val missense_variant 0.68
rpoC 765466 c.2097C>T synonymous_variant 0.68
rpoC 765469 c.2100G>C synonymous_variant 0.68
rpoC 765478 c.2109T>C synonymous_variant 0.76
rpoC 765480 p.Tyr704Phe missense_variant 0.76
rpoC 765499 c.2130C>G synonymous_variant 0.82
rpoC 765508 c.2139C>G synonymous_variant 0.84
rpoC 765548 c.2179_2181delAGCinsTCG synonymous_variant 0.88
rpoC 765553 c.2184C>T synonymous_variant 0.88
rpoC 765556 c.2187G>C synonymous_variant 0.88
rpoC 765559 c.2190G>C synonymous_variant 0.88
rpoC 765596 p.Lys743Gln missense_variant 0.74
rpoC 765607 c.2238C>G synonymous_variant 0.73
rpoC 765612 p.His748Arg missense_variant 0.6
rpoC 765640 c.2271A>G synonymous_variant 0.22
rpoC 765644 p.Gln759Lys missense_variant 0.2
rpoC 765648 p.Phe760Tyr missense_variant 0.22
rpoC 765655 c.2286T>C synonymous_variant 0.3
rpoC 765658 c.2289C>T synonymous_variant 0.3
rpoC 765662 c.2293T>C synonymous_variant 0.3
rpoC 765685 p.Glu772Asp missense_variant 0.44
rpoC 765688 c.2319G>C synonymous_variant 0.41
rpoC 765694 c.2325G>C synonymous_variant 0.41
rpoC 765695 p.Glu776Lys missense_variant 0.39
rpoC 765700 c.2331T>C synonymous_variant 0.39
rpoC 765704 p.Lys779Gln missense_variant 0.39
rpoC 765709 p.Glu780Asp missense_variant 0.39
rpoC 765718 p.Asp783Glu missense_variant 0.35
rpoC 765727 c.2358T>C synonymous_variant 0.33
rpoC 765728 p.Gln787Glu missense_variant 0.33
rpoC 765733 c.2364G>C synonymous_variant 0.31
rpoC 765734 c.2365T>C synonymous_variant 0.29
rpoC 765741 p.Glu791Ala missense_variant 0.33
rpoC 765751 c.2382C>G synonymous_variant 0.25
rpoC 765752 p.Asp795Lys missense_variant 0.25
rpoC 765772 c.2403C>G synonymous_variant 0.62
rpoC 765784 c.2415C>G synonymous_variant 0.58
rpoC 765787 c.2418C>T synonymous_variant 0.58
rpoC 765793 c.2424C>G synonymous_variant 0.59
rpoC 765796 c.2427C>T synonymous_variant 0.63
rpoC 765805 c.2436C>G synonymous_variant 0.62
rpoC 765811 c.2442T>C synonymous_variant 0.62
rpoC 765812 c.2443_2445delCGAinsAGG synonymous_variant 0.62
rpoC 765817 c.2448G>C synonymous_variant 0.66
rpoC 765826 c.2457T>C synonymous_variant 0.73
rpoC 765875 p.Val836Ile missense_variant 0.71
rpoC 765883 c.2514C>T synonymous_variant 0.74
rpoC 765886 c.2517C>G synonymous_variant 0.75
rpoC 765892 c.2523T>C synonymous_variant 0.76
rpoC 765904 c.2535C>G synonymous_variant 0.8
rpoC 765937 c.2568T>C synonymous_variant 0.69
rpoC 765946 c.2577C>T synonymous_variant 0.65
rpoC 765947 c.2578T>C synonymous_variant 0.66
rpoC 765961 c.2592G>T synonymous_variant 0.65
rpoC 765962 c.2593_2595delTTGinsCTT synonymous_variant 0.65
rpoC 765967 c.2598C>G synonymous_variant 0.65
rpoC 765970 c.2601C>A synonymous_variant 0.66
rpoC 765979 c.2610C>G synonymous_variant 0.62
rpoC 765994 c.2625A>T synonymous_variant 0.5
rpoC 766003 c.2634G>C synonymous_variant 0.41
rpoC 766010 p.Ser881Thr missense_variant 0.22
rpoC 766333 c.2964G>C synonymous_variant 0.23
rpoC 766345 c.2976T>C synonymous_variant 0.4
rpoC 766348 c.2979A>G synonymous_variant 0.46
rpoC 766357 c.2988C>T synonymous_variant 0.58
rpoC 766363 c.2994G>C synonymous_variant 0.63
rpoC 766366 c.2997C>G synonymous_variant 0.64
rpoC 766369 c.3000C>G synonymous_variant 0.65
rpoC 766384 c.3015A>G synonymous_variant 0.74
rpoC 766390 c.3021C>T synonymous_variant 0.75
rpoC 766393 c.3024C>G synonymous_variant 0.75
rpoC 766411 c.3042C>G synonymous_variant 0.78
rpoC 766423 c.3054T>C synonymous_variant 0.85
rpoC 766456 c.3087C>T synonymous_variant 0.85
rpoC 766459 c.3090G>C synonymous_variant 0.83
rpoC 766483 c.3114G>T synonymous_variant 0.77
rpoC 766484 p.Val1039Ile missense_variant 0.81
rpoC 766492 c.3123T>G synonymous_variant 0.81
rpoC 766493 p.Gly1042Asn missense_variant 0.81
rpoC 766528 c.3159T>G synonymous_variant 0.81
rpoC 766531 c.3162G>C synonymous_variant 0.81
rpoC 766537 c.3168G>A synonymous_variant 0.83
rpoC 766540 p.Asp1057Glu missense_variant 0.84
rpoC 766549 c.3180G>C synonymous_variant 0.8
rpoC 766573 c.3204T>C synonymous_variant 0.65
rpoC 766579 c.3210C>T synonymous_variant 0.62
rpoC 766585 c.3216T>C synonymous_variant 0.59
rpoC 766588 c.3219G>A synonymous_variant 0.61
rpoC 766597 c.3228C>G synonymous_variant 0.58
rpoC 766607 p.Ile1080Leu missense_variant 0.27
rpoC 766645 p.Glu1092Asp missense_variant 0.26
rpoC 766651 c.3282T>C synonymous_variant 0.29
rpoC 766652 p.Ser1095Thr missense_variant 0.29
rpoC 766657 c.3288A>G synonymous_variant 0.29
rpoC 766660 c.3291G>C synonymous_variant 0.29
rpoC 766661 p.Val1098Leu missense_variant 0.32
rpoC 766667 p.Ser1100Ala missense_variant 0.5
rpoC 766672 c.3303T>C synonymous_variant 0.59
rpoC 766681 c.3312C>T synonymous_variant 0.63
rpoC 766711 c.3342C>T synonymous_variant 0.65
rpoC 766712 p.Ser1115Ala missense_variant 0.63
rpoC 766720 c.3351C>T synonymous_variant 0.73
rpoC 766726 c.3357T>C synonymous_variant 0.76
rpoC 766738 c.3369G>T synonymous_variant 0.79
rpoC 766741 c.3372G>C synonymous_variant 0.81
rpoC 766747 c.3378C>T synonymous_variant 0.83
rpoC 766765 c.3396A>C synonymous_variant 0.84
rpoC 766771 c.3402G>C synonymous_variant 0.81
rpoC 766774 c.3405T>C synonymous_variant 0.8
rpoC 766775 p.Arg1136Lys missense_variant 0.8
rpoC 766801 c.3432C>T synonymous_variant 0.81
rpoC 766804 c.3435A>G synonymous_variant 0.81
rpoC 766807 c.3438T>C synonymous_variant 0.8
rpoC 766837 c.3468G>C synonymous_variant 0.76
rpoC 766843 c.3474T>C synonymous_variant 0.72
rpoC 766846 c.3477C>G synonymous_variant 0.7
rpoC 766858 c.3489C>T synonymous_variant 0.67
rpoC 766861 c.3492G>C synonymous_variant 0.67
rpoC 766864 c.3495G>C synonymous_variant 0.67
rpoC 766867 c.3498C>G synonymous_variant 0.69
rpoC 766888 c.3519G>A synonymous_variant 0.56
rpoC 766894 c.3525T>C synonymous_variant 0.54
rpoC 766895 c.3526T>C synonymous_variant 0.54
rpoC 766900 c.3531T>C synonymous_variant 0.54
rpoC 766911 p.Ile1181Thr missense_variant 0.43
rpoC 766915 p.Asp1182Glu missense_variant 0.33
rpoC 766918 c.3549C>T synonymous_variant 0.21
rpoC 766920 p.Ala1184Gly missense_variant 0.2
rpoC 766931 p.Ala1188Thr missense_variant 0.53
rpoC 766942 c.3573C>T synonymous_variant 0.7
rpoC 766945 c.3576A>G synonymous_variant 0.71
rpoC 766951 c.3582G>C synonymous_variant 0.73
rpoC 766963 c.3594T>C synonymous_variant 0.75
rpoC 766978 c.3609C>T synonymous_variant 0.8
rpoC 766996 c.3627C>T synonymous_variant 0.84
rpoC 767056 c.3687C>A synonymous_variant 0.83
rpoC 767059 c.3690T>C synonymous_variant 0.83
rpoC 767098 c.3729T>C synonymous_variant 0.88
rpoC 767104 c.3735C>G synonymous_variant 0.86
rpoC 767105 p.Asn1246Gln missense_variant 0.86
rpoC 767119 c.3750A>G synonymous_variant 0.86
rpoC 767180 p.Ala1271Gln missense_variant 0.84
rpoC 767191 c.3822C>G synonymous_variant 0.8
rpoC 767200 c.3831G>A synonymous_variant 0.81
rpoC 767221 c.3852C>G synonymous_variant 0.79
rpoC 767230 c.3861G>C synonymous_variant 0.75
rpoC 767233 c.3864T>C synonymous_variant 0.75
rpoC 767263 c.3894T>C synonymous_variant 0.5
rpoC 767264 p.Ala1299Gln missense_variant 0.46
rpoC 767275 c.3906T>G synonymous_variant 0.45
rpoC 767278 c.3909T>C synonymous_variant 0.47
rpoC 767281 c.3912C>G synonymous_variant 0.47
rpoC 767284 c.3915C>G synonymous_variant 0.44
rpoC 767306 p.Ser1313Cys missense_variant 0.17
mmpL5 775639 p.Ile948Val missense_variant 1.0
mmpL5 775856 c.2625T>C synonymous_variant 0.24
mmpL5 775865 c.2616T>C synonymous_variant 0.42
mmpL5 775875 p.Gly869Ala missense_variant 0.25
mmpL5 775885 p.Ile866Leu missense_variant 0.31
mmpL5 775886 c.2595A>G synonymous_variant 0.42
mmpL5 775889 c.2592C>G synonymous_variant 0.41
mmpL5 775893 p.His863Pro missense_variant 0.56
mmpL5 775895 p.Ile862Leu missense_variant 0.25
mmpL5 775907 c.2572_2574delCTCinsTTG synonymous_variant 0.28
mmpL5 775913 p.Ala856Ser missense_variant 0.24
mmpL5 775916 c.2565T>C synonymous_variant 0.39
mmpL5 775921 c.2560C>T synonymous_variant 0.23
mmpL5 775922 c.2559G>C synonymous_variant 0.31
mmpL5 775939 p.Ala848Ser missense_variant 0.24
mmpL5 775946 c.2535C>G synonymous_variant 0.51
mmpL5 775951 c.2530C>T synonymous_variant 0.28
mmpL5 775961 c.2520C>G synonymous_variant 0.25
mmpL5 776030 c.2451G>C synonymous_variant 0.18
mmpL5 776039 c.2442C>G synonymous_variant 0.25
mmpL5 776075 c.2406C>G synonymous_variant 0.29
mmpL5 776084 c.2397C>G synonymous_variant 0.27
mmpL5 776100 p.Thr794Ile missense_variant 0.33
mmpL5 776115 p.Ile789Thr missense_variant 0.2
mmpL5 776650 p.Asp611Asn missense_variant 0.18
mmpL5 776678 c.1803G>A synonymous_variant 0.39
mmpL5 776681 p.Leu600Phe missense_variant 0.38
mmpL5 776686 p.Ser599Ala missense_variant 0.38
mmpL5 776695 p.Val596Ile missense_variant 0.38
mmpL5 776704 p.Asp593Asn missense_variant 0.48
mmpL5 776706 p.Tyr592Phe missense_variant 0.5
mmpL5 776715 p.Lys589Pro missense_variant 0.45
mmpL5 776733 p.Ser583Asn missense_variant 0.4
mmpL5 776744 c.1737C>G synonymous_variant 0.42
mmpL5 776753 c.1728T>C synonymous_variant 0.27
mmpL5 777104 c.1377G>C synonymous_variant 0.21
mmpL5 777110 c.1371T>C synonymous_variant 0.25
mmpL5 777115 p.Met456Leu missense_variant 0.33
mmpL5 777122 c.1359C>T synonymous_variant 0.38
mmpL5 777133 p.Val450Ile missense_variant 0.61
mmpL5 777142 p.Val447Leu missense_variant 0.72
mmpL5 777164 c.1317C>A synonymous_variant 0.7
mmpL5 777170 c.1311T>C synonymous_variant 0.7
mmpL5 777173 c.1308C>G synonymous_variant 0.65
mmpL5 777176 p.Glu435Asp missense_variant 0.67
mmpL5 777179 c.1302G>C synonymous_variant 0.65
mmpL5 777188 c.1293T>C synonymous_variant 0.63
mmpL5 777191 c.1290C>G synonymous_variant 0.63
mmpL5 777194 p.Glu429Gln missense_variant 0.64
mmpL5 777206 c.1275A>G synonymous_variant 0.67
mmpL5 777227 c.1254C>G synonymous_variant 0.64
mmpL5 777245 c.1236G>C synonymous_variant 0.36
mmpL5 777251 c.1230C>T synonymous_variant 0.22
mmpL5 777254 c.1227G>C synonymous_variant 0.22
mmpL5 777260 p.Thr407Ala missense_variant 0.24
mmpL5 777269 c.1212T>C synonymous_variant 0.29
mmpL5 777272 c.1209C>G synonymous_variant 0.25
mmpL5 777275 c.1206C>G synonymous_variant 0.29
mmpL5 777280 p.Ala401Ser missense_variant 0.31
mmpS5 779609 c.-704C>T upstream_gene_variant 0.9
rpsL 781395 c.-165T>C upstream_gene_variant 1.0
rpsL 781628 c.69T>C synonymous_variant 0.5
rpsL 781631 c.72G>C synonymous_variant 0.51
rpsL 781649 c.90T>C synonymous_variant 0.47
rpsL 781652 c.93T>C synonymous_variant 0.47
rpsL 781655 c.96T>A synonymous_variant 0.48
rpsL 781658 c.99A>G synonymous_variant 0.5
rpsL 781676 c.117C>G synonymous_variant 0.54
rpsL 781682 c.123T>C synonymous_variant 0.57
rpsL 781703 c.144G>A synonymous_variant 0.61
rpsL 781715 c.156T>C synonymous_variant 0.52
rpsL 781718 c.159C>G synonymous_variant 0.47
rpsL 781724 c.165G>C synonymous_variant 0.4
rpsL 781728 c.169T>C synonymous_variant 0.41
rpsL 781733 c.174G>C synonymous_variant 0.39
rpsL 781736 c.177T>C synonymous_variant 0.39
rpsL 781737 p.Gln60Ala missense_variant 0.39
rpsL 781751 c.192G>C synonymous_variant 0.59
rpsL 781754 c.195G>C synonymous_variant 0.62
rpsL 781760 c.201T>C synonymous_variant 0.63
rpsL 781763 c.204C>G synonymous_variant 0.65
rpsL 781817 c.258G>T synonymous_variant 0.83
rpsL 781832 c.273T>G synonymous_variant 0.86
rpsL 781859 c.300T>C synonymous_variant 0.86
rpsL 781862 c.303G>C synonymous_variant 0.86
rpsL 781868 c.309T>C synonymous_variant 0.86
rpsL 781871 c.312G>C synonymous_variant 0.86
rpsL 781877 c.318T>C synonymous_variant 0.84
rpsL 781880 c.321C>G synonymous_variant 0.84
rpsL 781892 c.333A>G synonymous_variant 0.86
rpsL 781898 c.339A>G synonymous_variant 0.85
rpsL 781901 c.342C>T synonymous_variant 0.84
rpsL 781916 c.357T>G synonymous_variant 0.84
rpsL 781929 p.Gly124Ser missense_variant 0.84
rplC 800612 c.-197A>G upstream_gene_variant 0.64
rplC 800618 c.-191T>C upstream_gene_variant 0.65
rplC 800633 c.-176T>C upstream_gene_variant 0.74
rplC 800645 c.-164C>G upstream_gene_variant 0.77
rplC 800648 c.-161A>C upstream_gene_variant 0.79
rplC 800654 c.-155T>C upstream_gene_variant 0.81
rplC 800693 c.-116A>T upstream_gene_variant 0.87
rplC 800703 c.-106T>C upstream_gene_variant 0.87
rplC 800715 c.-94A>C upstream_gene_variant 0.85
rplC 800720 c.-89T>C upstream_gene_variant 0.86
rplC 800723 c.-86C>G upstream_gene_variant 0.85
rplC 800744 c.-65G>T upstream_gene_variant 0.76
rplC 800747 c.-62C>G upstream_gene_variant 0.75
rplC 800759 c.-50C>T upstream_gene_variant 0.71
rplC 800762 c.-47T>G upstream_gene_variant 0.68
rplC 800829 c.21C>G synonymous_variant 0.67
rplC 800832 c.24T>C synonymous_variant 0.68
rplC 800844 c.36T>C synonymous_variant 0.78
rplC 800856 c.48A>G synonymous_variant 0.83
rplC 800865 c.57A>G synonymous_variant 0.82
rplC 800867 p.Ser20Asn missense_variant 0.8
rplC 800872 c.64_66delAGAinsCGG synonymous_variant 0.78
rplC 800877 c.69A>C synonymous_variant 0.79
rplC 800880 c.72A>G synonymous_variant 0.82
rplC 800889 c.81C>G synonymous_variant 0.84
rplC 800892 c.84G>C synonymous_variant 0.85
rplC 800916 c.108A>G synonymous_variant 0.86
rplC 800919 c.111C>G synonymous_variant 0.85
rplC 800934 c.126C>G synonymous_variant 0.8
rplC 800937 c.129A>G synonymous_variant 0.77
rplC 800946 c.138T>G synonymous_variant 0.71
rplC 800949 c.141T>C synonymous_variant 0.69
rplC 800955 c.147C>T synonymous_variant 0.69
rplC 800970 c.162T>C synonymous_variant 0.66
rplC 800985 c.177A>C synonymous_variant 0.56
rplC 800994 c.186C>G synonymous_variant 0.32
rplC 801117 c.309G>C synonymous_variant 0.4
rplC 801132 c.324T>C synonymous_variant 0.6
rplC 801137 p.Ser110Thr missense_variant 0.58
rplC 801141 c.333C>T synonymous_variant 0.56
rplC 801147 c.339T>C synonymous_variant 0.56
rplC 801153 c.345G>C synonymous_variant 0.54
rplC 801156 c.348T>C synonymous_variant 0.5
rplC 801160 c.352_353delTCinsAG synonymous_variant 0.5
rplC 801171 c.363A>G synonymous_variant 0.66
rplC 801174 c.366T>C synonymous_variant 0.66
rplC 801186 c.378C>G synonymous_variant 0.67
rplC 801195 c.387G>C synonymous_variant 0.69
rplC 801222 c.414T>C synonymous_variant 0.59
rplC 801228 c.420T>C synonymous_variant 0.56
rplC 801231 c.423C>G synonymous_variant 0.55
rplC 801237 c.429G>T synonymous_variant 0.55
rplC 801249 c.441T>C synonymous_variant 0.5
rplC 801252 c.444G>C synonymous_variant 0.49
rplC 801264 c.456C>T synonymous_variant 0.25
rplC 801270 c.462T>C synonymous_variant 0.24
fbiC 1303302 c.372A>G synonymous_variant 0.2
fbiC 1303383 c.453G>C synonymous_variant 0.24
fbiC 1303418 p.Gly163Asp missense_variant 0.2
fbiC 1303480 p.Gln184Glu missense_variant 0.22
fbiC 1303492 c.562T>C synonymous_variant 0.5
fbiC 1303509 c.579G>C synonymous_variant 0.69
fbiC 1303512 c.582T>C synonymous_variant 0.68
fbiC 1303530 c.600G>A synonymous_variant 0.73
fbiC 1303531 p.Met201Leu missense_variant 0.73
fbiC 1303536 c.606G>T synonymous_variant 0.76
fbiC 1303539 c.609G>A synonymous_variant 0.78
fbiC 1303545 c.615A>G synonymous_variant 0.83
fbiC 1303551 c.621G>C synonymous_variant 0.82
fbiC 1303584 c.654C>G synonymous_variant 0.77
fbiC 1303590 c.660A>C synonymous_variant 0.75
fbiC 1303602 c.672A>G synonymous_variant 0.56
fbiC 1303605 c.675C>G synonymous_variant 0.48
fbiC 1303607 p.Lys226Arg missense_variant 0.46
fbiC 1303611 c.681G>C synonymous_variant 0.46
fbiC 1303614 c.684C>G synonymous_variant 0.46
fbiC 1303632 c.702T>G synonymous_variant 0.45
fbiC 1303638 c.708A>G synonymous_variant 0.33
fbiC 1304022 c.1092T>C synonymous_variant 0.29
fbiC 1304050 c.1120T>C synonymous_variant 0.23
fbiC 1304064 c.1134G>C synonymous_variant 0.25
fbiC 1304067 c.1137G>C synonymous_variant 0.25
fbiC 1304070 c.1140C>G synonymous_variant 0.29
fbiC 1304079 p.Glu383Asp missense_variant 0.37
fbiC 1304085 c.1155C>T synonymous_variant 0.37
fbiC 1304092 p.Met388Leu missense_variant 0.42
fbiC 1304106 c.1176G>C synonymous_variant 0.39
fbiC 1304115 c.1185A>G synonymous_variant 0.26
fbiC 1304118 c.1188C>G synonymous_variant 0.26
fbiC 1304119 p.Lys397Gln missense_variant 0.25
fbiC 1304127 c.1197A>G synonymous_variant 0.32
fbiC 1304136 c.1206C>T synonymous_variant 0.32
fbiC 1304163 c.1233G>C synonymous_variant 0.27
fbiC 1304169 c.1239T>C synonymous_variant 0.25
fbiC 1304473 c.1543C>T synonymous_variant 0.19
fbiC 1304497 p.Pro523Thr missense_variant 0.41
fbiC 1304503 c.1573C>T synonymous_variant 0.44
fbiC 1304508 p.Glu526Asp missense_variant 0.5
fbiC 1304520 c.1590A>G synonymous_variant 0.51
fbiC 1304523 c.1593G>T synonymous_variant 0.51
fbiC 1304533 c.1603T>C synonymous_variant 0.59
fbiC 1304545 p.Val539Thr missense_variant 0.63
fbiC 1304568 c.1638T>C synonymous_variant 0.75
fbiC 1304571 c.1641G>C synonymous_variant 0.75
fbiC 1304580 c.1650T>C synonymous_variant 0.78
fbiC 1304613 c.1683T>C synonymous_variant 0.79
fbiC 1304619 c.1689G>C synonymous_variant 0.8
fbiC 1304634 c.1704C>G synonymous_variant 0.81
fbiC 1304640 c.1710A>C synonymous_variant 0.81
fbiC 1304646 c.1716T>C synonymous_variant 0.8
fbiC 1304658 c.1728C>G synonymous_variant 0.75
fbiC 1304661 c.1731C>T synonymous_variant 0.71
fbiC 1304667 c.1737G>T synonymous_variant 0.71
fbiC 1304675 p.Gly582Asp missense_variant 0.63
fbiC 1304694 c.1764A>G synonymous_variant 0.68
fbiC 1304703 c.1773C>G synonymous_variant 0.66
fbiC 1304715 c.1785G>C synonymous_variant 0.59
fbiC 1304718 c.1788C>G synonymous_variant 0.62
fbiC 1304724 c.1794A>G synonymous_variant 0.62
fbiC 1304727 c.1797A>G synonymous_variant 0.57
fbiC 1304742 c.1812T>C synonymous_variant 0.45
fbiC 1304748 c.1818T>C synonymous_variant 0.44
fbiC 1304754 c.1824G>A synonymous_variant 0.47
fbiC 1304755 c.1825C>T synonymous_variant 0.5
fbiC 1304760 c.1830G>C synonymous_variant 0.53
fbiC 1304778 c.1848T>C synonymous_variant 0.27
fbiC 1304784 c.1854T>G synonymous_variant 0.21
fbiC 1304787 c.1857T>G synonymous_variant 0.21
fbiC 1304797 p.Ala623Thr missense_variant 0.19
fbiC 1304832 c.1902C>T synonymous_variant 0.21
fbiC 1304853 c.1923C>T synonymous_variant 0.2
fbiC 1304922 c.1992C>T synonymous_variant 0.18
fbiC 1304928 c.1998T>C synonymous_variant 0.25
fbiC 1304931 c.2001C>G synonymous_variant 0.29
fbiC 1304937 c.2007G>C synonymous_variant 0.44
fbiC 1304940 c.2010A>G synonymous_variant 0.52
fbiC 1304946 c.2016G>C synonymous_variant 0.57
fbiC 1304958 c.2028T>C synonymous_variant 0.6
fbiC 1304961 c.2031C>G synonymous_variant 0.62
fbiC 1304967 c.2037G>C synonymous_variant 0.67
fbiC 1304994 c.2064A>G synonymous_variant 0.66
fbiC 1304995 p.Leu689Met missense_variant 0.66
fbiC 1305006 c.2076A>G synonymous_variant 0.65
fbiC 1305007 p.Ile693Val missense_variant 0.65
fbiC 1305030 c.2100G>C synonymous_variant 0.64
fbiC 1305033 c.2103T>G synonymous_variant 0.62
fbiC 1305042 c.2112A>G synonymous_variant 0.52
fbiC 1305043 c.2113_2115delTCAinsAGT synonymous_variant 0.48
fbiC 1305396 c.2466C>G synonymous_variant 0.29
fbiC 1305399 c.2469A>G synonymous_variant 0.27
fbiC 1305400 p.His824Phe missense_variant 0.27
fbiC 1305405 c.2475A>G synonymous_variant 0.27
fbiC 1305408 c.2478G>C synonymous_variant 0.24
fbiC 1305409 p.Ala827Tyr missense_variant 0.22
fbiC 1305417 c.2487C>G synonymous_variant 0.24
fbiC 1305422 p.Ala831Glu missense_variant 0.27
fbiC 1305426 c.2496G>A synonymous_variant 0.29
fbiC 1305429 c.2499G>C synonymous_variant 0.27
fbiC 1305444 c.2514A>G synonymous_variant 0.31
atpE 1461042 c.-2delA upstream_gene_variant 0.4
atpE 1461050 c.6C>T synonymous_variant 0.55
atpE 1461071 c.27C>G synonymous_variant 0.68
atpE 1461101 c.57T>C synonymous_variant 0.77
atpE 1461107 c.63C>A synonymous_variant 0.74
atpE 1461131 c.87T>C synonymous_variant 0.74
atpE 1461132 p.Val30Ile missense_variant 0.76
atpE 1461137 c.93C>G synonymous_variant 0.72
atpE 1461149 c.105T>G synonymous_variant 0.62
atpE 1461153 p.Ser37Ala missense_variant 0.59
atpE 1461158 c.114T>C synonymous_variant 0.56
atpE 1461159 p.Val39Ile missense_variant 0.56
atpE 1461164 c.120C>T synonymous_variant 0.6
atpE 1461170 c.126A>G synonymous_variant 0.64
atpE 1461182 c.138A>G synonymous_variant 0.6
atpE 1461185 c.141G>C synonymous_variant 0.59
atpE 1461188 c.144G>A synonymous_variant 0.6
atpE 1461191 c.147G>C synonymous_variant 0.57
atpE 1461197 c.153A>T synonymous_variant 0.59
atpE 1461212 c.168C>G synonymous_variant 0.46
atpE 1461215 c.171C>G synonymous_variant 0.47
atpE 1461219 c.175T>C synonymous_variant 0.49
atpE 1461224 c.180T>C synonymous_variant 0.49
atpE 1461233 c.189A>G synonymous_variant 0.47
atpE 1461254 c.210T>C synonymous_variant 0.61
rrs 1471659 n.-187C>T upstream_gene_variant 1.0
rrs 1471923 n.78T>C non_coding_transcript_exon_variant 0.89
rrs 1471925 n.80T>C non_coding_transcript_exon_variant 0.89
rrs 1471926 n.81C>T non_coding_transcript_exon_variant 0.9
rrs 1471932 n.87A>G non_coding_transcript_exon_variant 0.9
rrs 1471934 n.89A>G non_coding_transcript_exon_variant 0.9
rrs 1471986 n.141C>T non_coding_transcript_exon_variant 0.81
rrs 1472061 n.216A>T non_coding_transcript_exon_variant 0.76
rrs 1472108 n.263C>T non_coding_transcript_exon_variant 0.83
rrs 1472172 n.327T>C non_coding_transcript_exon_variant 0.21
rrs 1472203 n.358G>A non_coding_transcript_exon_variant 0.18
rrs 1472286 n.441C>G non_coding_transcript_exon_variant 0.54
rrs 1472287 n.442C>T non_coding_transcript_exon_variant 0.54
rrs 1472289 n.444T>C non_coding_transcript_exon_variant 0.52
rrs 1472297 n.453_465delGTCCGGGTTCTCT non_coding_transcript_exon_variant 0.53
rrs 1472315 n.470T>G non_coding_transcript_exon_variant 0.53
rrs 1472327 n.482G>A non_coding_transcript_exon_variant 0.63
rrs 1472328 n.483G>C non_coding_transcript_exon_variant 0.62
rrs 1472438 n.593T>C non_coding_transcript_exon_variant 0.93
rrs 1472446 n.601T>A non_coding_transcript_exon_variant 0.92
rrs 1472452 n.607G>A non_coding_transcript_exon_variant 0.92
rrs 1472464 n.619A>G non_coding_transcript_exon_variant 0.94
rrs 1472489 n.644A>G non_coding_transcript_exon_variant 0.93
rrs 1472844 n.1000dupG non_coding_transcript_exon_variant 0.82
rrs 1472848 n.1003T>G non_coding_transcript_exon_variant 0.82
rrs 1472849 n.1005delT non_coding_transcript_exon_variant 0.82
rrs 1472856 n.1012delA non_coding_transcript_exon_variant 0.83
rrs 1472859 n.1014G>T non_coding_transcript_exon_variant 0.83
rrs 1472861 n.1018dupT non_coding_transcript_exon_variant 0.85
rrs 1472969 n.1124A>G non_coding_transcript_exon_variant 0.83
rrs 1472973 n.1128A>T non_coding_transcript_exon_variant 0.83
rrs 1472978 n.1133T>C non_coding_transcript_exon_variant 0.83
rrs 1473104 n.1259C>T non_coding_transcript_exon_variant 0.85
rrs 1473110 n.1265T>G non_coding_transcript_exon_variant 0.83
rrs 1473111 n.1266A>G non_coding_transcript_exon_variant 0.82
rrs 1473276 n.1431A>G non_coding_transcript_exon_variant 0.91
rrs 1473301 n.1456T>C non_coding_transcript_exon_variant 0.91
rrl 1473658 n.1T>G non_coding_transcript_exon_variant 0.28
rrl 1473668 n.11C>T non_coding_transcript_exon_variant 0.44
rrl 1473696 n.39T>C non_coding_transcript_exon_variant 0.71
rrl 1473697 n.40C>T non_coding_transcript_exon_variant 0.72
rrl 1473743 n.86C>T non_coding_transcript_exon_variant 0.76
rrl 1473770 n.113T>G non_coding_transcript_exon_variant 0.77
rrl 1473788 n.131A>G non_coding_transcript_exon_variant 0.69
rrl 1473806 n.149C>T non_coding_transcript_exon_variant 0.59
rrl 1473807 n.150T>C non_coding_transcript_exon_variant 0.59
rrl 1473811 n.154C>A non_coding_transcript_exon_variant 0.61
rrl 1473813 n.156C>G non_coding_transcript_exon_variant 0.61
rrl 1473814 n.157A>C non_coding_transcript_exon_variant 0.61
rrl 1473815 n.158T>G non_coding_transcript_exon_variant 0.61
rrl 1473829 n.172G>C non_coding_transcript_exon_variant 0.69
rrl 1473830 n.173T>G non_coding_transcript_exon_variant 0.69
rrl 1473831 n.174G>T non_coding_transcript_exon_variant 0.69
rrl 1473833 n.176G>T non_coding_transcript_exon_variant 0.69
rrl 1473836 n.179A>G non_coding_transcript_exon_variant 0.71
rrl 1473876 n.219G>A non_coding_transcript_exon_variant 0.35
rrl 1473898 n.241C>T non_coding_transcript_exon_variant 0.21
rrl 1474112 n.455T>C non_coding_transcript_exon_variant 0.26
rrl 1474140 n.483C>T non_coding_transcript_exon_variant 0.67
rrl 1474151 n.494C>T non_coding_transcript_exon_variant 0.7
rrl 1474174 n.517A>G non_coding_transcript_exon_variant 0.78
rrl 1474181 n.524C>T non_coding_transcript_exon_variant 0.81
rrl 1474185 n.528G>A non_coding_transcript_exon_variant 0.81
rrl 1474186 n.529A>G non_coding_transcript_exon_variant 0.82
rrl 1474202 n.545T>C non_coding_transcript_exon_variant 0.81
rrl 1474282 n.625G>A non_coding_transcript_exon_variant 0.57
rrl 1474289 n.632C>A non_coding_transcript_exon_variant 0.44
rrl 1474293 n.637_647delCCTCTCCGGAG non_coding_transcript_exon_variant 0.53
rrl 1474306 n.649A>T non_coding_transcript_exon_variant 0.47
rrl 1474308 n.651G>T non_coding_transcript_exon_variant 0.47
rrl 1474310 n.653T>G non_coding_transcript_exon_variant 0.55
rrl 1474362 n.705A>G non_coding_transcript_exon_variant 0.45
rrl 1474446 n.789C>T non_coding_transcript_exon_variant 0.59
rrl 1474626 n.969T>C non_coding_transcript_exon_variant 0.44
rrl 1474629 n.972G>A non_coding_transcript_exon_variant 0.83
rrl 1474636 n.979A>T non_coding_transcript_exon_variant 0.83
rrl 1474637 n.980C>T non_coding_transcript_exon_variant 0.83
rrl 1474638 n.981C>G non_coding_transcript_exon_variant 0.83
rrl 1474639 n.982G>C non_coding_transcript_exon_variant 0.83
rrl 1474640 n.983C>T non_coding_transcript_exon_variant 0.83
rrl 1474720 n.1063C>T non_coding_transcript_exon_variant 0.89
rrl 1474722 n.1065T>C non_coding_transcript_exon_variant 0.89
rrl 1474753 n.1096A>G non_coding_transcript_exon_variant 0.9
rrl 1474760 n.1103A>G non_coding_transcript_exon_variant 0.89
rrl 1474794 n.1137C>T non_coding_transcript_exon_variant 0.77
rrl 1474812 n.1155G>A non_coding_transcript_exon_variant 0.78
rrl 1474830 n.1173A>G non_coding_transcript_exon_variant 0.78
rrl 1475017 n.1360G>A non_coding_transcript_exon_variant 0.29
rrl 1475031 n.1374G>T non_coding_transcript_exon_variant 0.55
rrl 1475061 n.1404C>T non_coding_transcript_exon_variant 0.84
rrl 1475088 n.1431A>G non_coding_transcript_exon_variant 0.88
rrl 1475199 n.1542G>A non_coding_transcript_exon_variant 0.46
rrl 1475202 n.1545G>A non_coding_transcript_exon_variant 0.36
rrl 1475206 n.1549C>T non_coding_transcript_exon_variant 0.26
rrl 1475209 n.1552G>C non_coding_transcript_exon_variant 0.26
rrl 1475315 n.1658A>T non_coding_transcript_exon_variant 0.37
rrl 1475355 n.1698C>T non_coding_transcript_exon_variant 0.79
rrl 1475366 n.1709G>A non_coding_transcript_exon_variant 0.81
rrl 1475369 n.1712G>T non_coding_transcript_exon_variant 0.82
rrl 1475379 n.1722G>A non_coding_transcript_exon_variant 0.85
rrl 1475398 n.1741C>T non_coding_transcript_exon_variant 0.86
rrl 1475402 n.1745C>T non_coding_transcript_exon_variant 0.86
rrl 1475403 n.1746T>G non_coding_transcript_exon_variant 0.86
rrl 1475405 n.1748A>T non_coding_transcript_exon_variant 0.87
rrl 1475419 n.1762C>T non_coding_transcript_exon_variant 0.87
rrl 1475429 n.1772G>A non_coding_transcript_exon_variant 0.85
rrl 1475430 n.1773T>G non_coding_transcript_exon_variant 0.85
rrl 1475452 n.1795C>A non_coding_transcript_exon_variant 0.86
rrl 1475458 n.1801C>T non_coding_transcript_exon_variant 0.87
rrl 1475460 n.1803A>G non_coding_transcript_exon_variant 0.86
rrl 1475480 n.1823A>G non_coding_transcript_exon_variant 0.85
rrl 1475483 n.1826C>T non_coding_transcript_exon_variant 0.85
rrl 1475505 n.1848G>A non_coding_transcript_exon_variant 0.84
rrl 1475526 n.1869C>A non_coding_transcript_exon_variant 0.82
rrl 1475532 n.1875A>G non_coding_transcript_exon_variant 0.79
rrl 1475544 n.1887A>T non_coding_transcript_exon_variant 0.74
rrl 1475545 n.1888T>G non_coding_transcript_exon_variant 0.72
rrl 1475643 n.1986C>G non_coding_transcript_exon_variant 0.22
rrl 1475647 n.1990G>C non_coding_transcript_exon_variant 0.33
rrl 1475659 n.2002G>A non_coding_transcript_exon_variant 0.53
rrl 1475884 n.2227A>G non_coding_transcript_exon_variant 0.87
rrl 1475916 n.2259C>T non_coding_transcript_exon_variant 0.88
rrl 1475988 n.2331A>G non_coding_transcript_exon_variant 0.83
rrl 1475991 n.2334T>C non_coding_transcript_exon_variant 0.83
rrl 1475995 n.2338G>A non_coding_transcript_exon_variant 0.83
rrl 1476030 n.2373A>G non_coding_transcript_exon_variant 0.76
rrl 1476032 n.2375C>A non_coding_transcript_exon_variant 0.74
rrl 1476033 n.2376T>G non_coding_transcript_exon_variant 0.74
rrl 1476034 n.2377C>T non_coding_transcript_exon_variant 0.74
rrl 1476035 n.2378G>C non_coding_transcript_exon_variant 0.74
rrl 1476044 n.2387T>G non_coding_transcript_exon_variant 0.71
rrl 1476045 n.2388G>A non_coding_transcript_exon_variant 0.71
rrl 1476046 n.2389G>T non_coding_transcript_exon_variant 0.71
rrl 1476047 n.2390G>T non_coding_transcript_exon_variant 0.71
rrl 1476049 n.2392C>T non_coding_transcript_exon_variant 0.71
rrl 1476088 n.2431A>C non_coding_transcript_exon_variant 0.82
rrl 1476103 n.2446C>G non_coding_transcript_exon_variant 0.82
rrl 1476105 n.2448G>C non_coding_transcript_exon_variant 0.83
rrl 1476106 n.2449A>T non_coding_transcript_exon_variant 0.83
rrl 1476110 n.2453G>C non_coding_transcript_exon_variant 0.83
rrl 1476115 n.2458T>C non_coding_transcript_exon_variant 0.84
rrl 1476165 n.2508T>A non_coding_transcript_exon_variant 0.85
rrl 1476214 n.2557G>T non_coding_transcript_exon_variant 0.87
rrl 1476215 n.2558C>T non_coding_transcript_exon_variant 0.87
rrl 1476224 n.2567A>G non_coding_transcript_exon_variant 0.86
rrl 1476252 n.2595T>G non_coding_transcript_exon_variant 0.85
rrl 1476256 n.2599A>C non_coding_transcript_exon_variant 0.85
rrl 1476281 n.2624T>C non_coding_transcript_exon_variant 0.85
rrl 1476358 n.2701T>C non_coding_transcript_exon_variant 0.21
rrl 1476372 n.2715T>C non_coding_transcript_exon_variant 0.24
rrl 1476382 n.2725A>G non_coding_transcript_exon_variant 0.26
rrl 1476383 n.2726T>A non_coding_transcript_exon_variant 0.25
rrl 1476408 n.2751G>A non_coding_transcript_exon_variant 0.32
rrl 1476425 n.2768G>A non_coding_transcript_exon_variant 0.34
rrl 1476428 n.2771C>T non_coding_transcript_exon_variant 0.34
rrl 1476466 n.2809C>T non_coding_transcript_exon_variant 0.23
rrl 1476529 n.2872A>G non_coding_transcript_exon_variant 0.83
rrl 1476583 n.2926G>A non_coding_transcript_exon_variant 0.78
rrl 1476597 n.2940G>A non_coding_transcript_exon_variant 0.79
rrl 1476628 n.2971T>A non_coding_transcript_exon_variant 0.86
rrl 1476664 n.3007T>C non_coding_transcript_exon_variant 0.78
rrl 1476665 n.3008T>C non_coding_transcript_exon_variant 0.78
rrl 1476674 n.3017T>C non_coding_transcript_exon_variant 0.77
rrl 1476679 n.3022T>C non_coding_transcript_exon_variant 0.72
rrl 1476689 n.3033_3034delCT non_coding_transcript_exon_variant 0.63
rrl 1476693 n.3036G>A non_coding_transcript_exon_variant 0.64
rrl 1476716 n.3059A>C non_coding_transcript_exon_variant 0.76
rrl 1476723 n.3066T>A non_coding_transcript_exon_variant 0.74
rrl 1476726 n.3069A>G non_coding_transcript_exon_variant 0.67
rrl 1476731 n.3074G>A non_coding_transcript_exon_variant 0.6
rrl 1476732 n.3075T>C non_coding_transcript_exon_variant 0.6
rrl 1476740 n.3083G>A non_coding_transcript_exon_variant 0.5
rrl 1476741 n.3084G>C non_coding_transcript_exon_variant 0.5
rrl 1476743 n.3086A>C non_coding_transcript_exon_variant 0.5
rrl 1476746 n.3089T>C non_coding_transcript_exon_variant 0.52
rrl 1476750 n.3093T>C non_coding_transcript_exon_variant 0.55
rrl 1476758 n.3101G>T non_coding_transcript_exon_variant 0.52
rrl 1476759 n.3102T>C non_coding_transcript_exon_variant 0.52
rrl 1476770 n.3113T>C non_coding_transcript_exon_variant 0.52
rrl 1476771 n.3114G>A non_coding_transcript_exon_variant 0.52
inhA 1673646 c.-556T>C upstream_gene_variant 0.42
inhA 1673652 c.-550C>A upstream_gene_variant 0.44
fabG1 1673657 p.Thr73Lys missense_variant 0.44
inhA 1673660 c.-542C>A upstream_gene_variant 0.45
inhA 1673664 c.-538A>C upstream_gene_variant 0.5
inhA 1673667 c.-535A>G upstream_gene_variant 0.5
inhA 1673673 c.-529C>T upstream_gene_variant 0.54
inhA 1673697 c.-505G>C upstream_gene_variant 0.7
fabG1 1673710 p.Leu91Ile missense_variant 0.7
fabG1 1673716 p.Ala93Lys missense_variant 0.7
inhA 1673724 c.-478A>G upstream_gene_variant 0.75
inhA 1673748 c.-454A>G upstream_gene_variant 0.73
fabG1 1673749 p.Lys104Arg missense_variant 0.73
inhA 1673757 c.-445G>A upstream_gene_variant 0.74
fabG1 1673758 p.Lys107Glu missense_variant 0.74
inhA 1673778 c.-424C>G upstream_gene_variant 0.79
inhA 1673793 c.-409G>A upstream_gene_variant 0.65
inhA 1673796 c.-406G>C upstream_gene_variant 0.62
inhA 1673799 c.-403T>C upstream_gene_variant 0.6
inhA 1673802 c.-400A>G upstream_gene_variant 0.61
inhA 1673808 c.-394A>C upstream_gene_variant 0.68
fabG1 1673816 p.Ser126Thr missense_variant 0.7
fabG1 1673829 p.Asn130Lys missense_variant 0.25
fabG1 1673830 p.Lys131Arg missense_variant 0.23
inhA 1673841 c.-361A>G upstream_gene_variant 0.27
fabG1 1673844 p.Met135Ile missense_variant 0.27
inhA 1673847 c.-355A>C upstream_gene_variant 0.31
inhA 1673853 c.-349A>C upstream_gene_variant 0.3
inhA 1673856 c.-346T>C upstream_gene_variant 0.36
inhA 1673862 c.-340C>G upstream_gene_variant 0.5
fabG1 1673870 p.Ser144Met missense_variant 0.59
inhA 1673901 c.-301A>C upstream_gene_variant 0.62
fabG1 1673905 p.Ser156Ala missense_variant 0.6
inhA 1673916 c.-286A>C upstream_gene_variant 0.58
fabG1 1673917 p.Val160Leu missense_variant 0.58
inhA 1673922 c.-280T>C upstream_gene_variant 0.6
fabG1 1673941 p.Ala168Ser missense_variant 0.54
inhA 1673946 c.-256C>G upstream_gene_variant 0.49
fabG1 1673960 p.Ala174Val missense_variant 0.32
inhA 1674331 p.Leu44Met missense_variant 0.3
inhA 1674334 p.Arg45Lys missense_variant 0.3
inhA 1674342 c.141T>C synonymous_variant 0.32
inhA 1674352 p.Thr51Ala missense_variant 0.35
inhA 1674366 c.166_168delGCA conservative_inframe_deletion 0.33
inhA 1674384 c.183C>G synonymous_variant 0.3
inhA 1674399 c.198A>G synonymous_variant 0.32
inhA 1674404 p.Glu68Gly missense_variant 0.19
inhA 1674463 p.Leu88Ile missense_variant 0.52
inhA 1674471 c.270G>C synonymous_variant 0.65
inhA 1674474 c.273G>C synonymous_variant 0.67
inhA 1674480 c.279T>C synonymous_variant 0.71
inhA 1674486 c.285T>C synonymous_variant 0.74
inhA 1674489 c.288G>C synonymous_variant 0.77
inhA 1674502 p.Thr101Ser missense_variant 0.81
inhA 1674534 c.333G>C synonymous_variant 0.82
inhA 1674542 p.Ala114Glu missense_variant 0.81
inhA 1674552 c.351C>G synonymous_variant 0.79
inhA 1674555 c.354G>A synonymous_variant 0.77
inhA 1674561 c.360C>T synonymous_variant 0.76
inhA 1674573 c.372G>A synonymous_variant 0.75
inhA 1674582 c.381T>C synonymous_variant 0.77
inhA 1674589 p.Met130Leu missense_variant 0.7
inhA 1674600 c.399G>C synonymous_variant 0.67
inhA 1674601 p.Leu134Thr missense_variant 0.67
inhA 1674620 p.Pro140Arg missense_variant 0.62
inhA 1674624 c.423A>C synonymous_variant 0.62
inhA 1674627 c.426T>C synonymous_variant 0.62
inhA 1674628 c.427_428delTCinsAG synonymous_variant 0.62
inhA 1674656 p.Ser152Thr missense_variant 0.71
inhA 1674660 c.459G>C synonymous_variant 0.65
inhA 1674687 c.486G>C synonymous_variant 0.55
inhA 1674690 c.489C>G synonymous_variant 0.53
inhA 1674703 c.502T>C synonymous_variant 0.52
inhA 1674714 c.513C>G synonymous_variant 0.46
inhA 1674718 c.517_519delAGGinsCGC synonymous_variant 0.46
inhA 1674726 c.525G>C synonymous_variant 0.38
inhA 1674729 c.528G>T synonymous_variant 0.38
inhA 1674873 c.672G>A synonymous_variant 0.55
inhA 1674879 c.678T>C synonymous_variant 0.56
inhA 1674883 p.Ile228Val missense_variant 0.56
inhA 1674892 p.Asn231Asp missense_variant 0.52
inhA 1674904 p.Ala235Pro missense_variant 0.57
inhA 1674909 c.708G>C synonymous_variant 0.61
inhA 1674924 c.723G>C synonymous_variant 0.61
inhA 1674933 c.732G>C synonymous_variant 0.54
inhA 1674937 c.736C>T synonymous_variant 0.53
inhA 1674942 c.741T>G synonymous_variant 0.53
inhA 1674954 c.753G>C synonymous_variant 0.5
inhA 1674957 c.756G>C synonymous_variant 0.5
inhA 1674963 c.762G>C synonymous_variant 0.56
inhA 1674966 c.765T>C synonymous_variant 0.56
inhA 1674967 p.Asp256Thr missense_variant 0.56
inhA 1674970 p.Ile257Val missense_variant 0.56
rpsA 1833547 c.6G>A synonymous_variant 0.7
rpsA 1833554 p.Thr5Ser missense_variant 0.76
rpsA 1833589 c.48A>C synonymous_variant 0.84
rpsA 1833595 c.54T>G synonymous_variant 0.84
rpsA 1833616 c.75A>C synonymous_variant 0.82
rpsA 1833619 c.78A>C synonymous_variant 0.83
rpsA 1833625 c.84A>G synonymous_variant 0.85
rpsA 1833628 c.87G>C synonymous_variant 0.88
rpsA 1833661 c.120A>G synonymous_variant 0.81
rpsA 1833664 c.123C>A synonymous_variant 0.8
rpsA 1833676 c.135A>G synonymous_variant 0.81
rpsA 1833679 c.138G>T synonymous_variant 0.82
rpsA 1833685 c.144G>T synonymous_variant 0.81
rpsA 1833694 c.153G>C synonymous_variant 0.83
rpsA 1833697 c.156C>G synonymous_variant 0.84
rpsA 1833703 c.162C>T synonymous_variant 0.85
rpsA 1833709 c.168C>T synonymous_variant 0.86
rpsA 1833727 c.186G>C synonymous_variant 0.87
rpsA 1833733 c.192C>T synonymous_variant 0.88
rpsA 1833734 p.Ala65Ser missense_variant 0.89
rpsA 1833739 c.198C>T synonymous_variant 0.89
rpsA 1833742 c.201A>G synonymous_variant 0.91
rpsA 1833745 c.204G>C synonymous_variant 0.91
rpsA 1833748 c.207C>T synonymous_variant 0.89
rpsA 1833778 c.237C>T synonymous_variant 0.94
rpsA 1833781 c.240T>G synonymous_variant 0.92
rpsA 1833790 c.249T>A synonymous_variant 0.92
rpsA 1833805 c.264C>T synonymous_variant 0.91
rpsA 1833811 c.270G>C synonymous_variant 0.9
rpsA 1833829 c.288A>G synonymous_variant 0.91
rpsA 1833832 c.291G>A synonymous_variant 0.92
rpsA 1833838 c.297G>C synonymous_variant 0.92
rpsA 1833841 c.300C>G synonymous_variant 0.93
rpsA 1833847 c.306C>G synonymous_variant 0.94
rpsA 1833856 c.315A>G synonymous_variant 0.96
rpsA 1833862 c.321G>T synonymous_variant 0.94
rpsA 1833874 c.333T>G synonymous_variant 0.94
rpsA 1833892 c.351G>A synonymous_variant 0.96
rpsA 1833894 p.Ala118Glu missense_variant 0.96
rpsA 1833904 c.363G>A synonymous_variant 0.93
rpsA 1833928 c.387G>C synonymous_variant 0.89
rpsA 1833949 c.408T>C synonymous_variant 0.83
rpsA 1833970 c.429G>C synonymous_variant 0.79
rpsA 1833979 c.438T>C synonymous_variant 0.76
rpsA 1833982 c.441C>T synonymous_variant 0.73
rpsA 1833985 c.444G>T synonymous_variant 0.76
rpsA 1833991 c.450C>G synonymous_variant 0.79
rpsA 1834000 c.459G>C synonymous_variant 0.8
rpsA 1834009 c.468C>T synonymous_variant 0.79
rpsA 1834012 c.471G>T synonymous_variant 0.79
rpsA 1834015 c.474G>C synonymous_variant 0.78
rpsA 1834021 c.480C>T synonymous_variant 0.81
rpsA 1834030 c.489C>G synonymous_variant 0.82
rpsA 1834069 c.528G>C synonymous_variant 0.87
rpsA 1834096 c.555G>C synonymous_variant 0.83
rpsA 1834102 c.561T>C synonymous_variant 0.8
rpsA 1834150 c.609G>C synonymous_variant 0.25
rpsA 1834195 c.654G>C synonymous_variant 0.18
rpsA 1834225 c.684C>G synonymous_variant 0.63
rpsA 1834234 c.693G>C synonymous_variant 0.68
rpsA 1834249 c.708T>C synonymous_variant 0.74
rpsA 1834261 c.720A>G synonymous_variant 0.78
rpsA 1834264 c.723G>C synonymous_variant 0.77
rpsA 1834279 c.738C>T synonymous_variant 0.82
rpsA 1834282 c.741C>T synonymous_variant 0.82
rpsA 1834294 c.753G>C synonymous_variant 0.83
rpsA 1834303 c.762T>G synonymous_variant 0.84
rpsA 1834306 c.765T>C synonymous_variant 0.84
rpsA 1834348 c.807T>C synonymous_variant 0.84
rpsA 1834366 c.825A>G synonymous_variant 0.83
rpsA 1834396 c.855G>C synonymous_variant 0.82
rpsA 1834411 c.870T>C synonymous_variant 0.81
rpsA 1834423 c.882G>T synonymous_variant 0.8
rpsA 1834426 c.885G>A synonymous_variant 0.8
rpsA 1834451 c.910T>C synonymous_variant 0.83
rpsA 1834456 c.915T>G synonymous_variant 0.84
rpsA 1834465 c.924T>C synonymous_variant 0.84
rpsA 1834468 c.927A>G synonymous_variant 0.83
rpsA 1834477 c.936C>T synonymous_variant 0.89
rpsA 1834489 c.948T>C synonymous_variant 0.86
rpsA 1834498 c.957C>T synonymous_variant 0.87
rpsA 1834520 p.Ala327Ser missense_variant 0.89
rpsA 1834528 c.987T>C synonymous_variant 0.87
rpsA 1834540 c.999G>C synonymous_variant 0.83
rpsA 1834543 c.1002C>A synonymous_variant 0.8
rpsA 1834546 c.1005T>C synonymous_variant 0.8
rpsA 1834555 c.1014T>G synonymous_variant 0.76
rpsA 1834556 p.Ala339Gln missense_variant 0.75
rpsA 1834598 c.1057C>T synonymous_variant 0.78
rpsA 1834606 c.1065C>T synonymous_variant 0.74
rpsA 1834609 c.1068T>C synonymous_variant 0.74
rpsA 1834612 c.1071G>C synonymous_variant 0.73
rpsA 1834619 c.1078T>C synonymous_variant 0.71
rpsA 1834622 c.1081_1083delTCGinsAGC synonymous_variant 0.73
rpsA 1834633 c.1092A>G synonymous_variant 0.8
rpsA 1834639 c.1098T>C synonymous_variant 0.83
rpsA 1834666 c.1125G>C synonymous_variant 0.84
rpsA 1834667 p.Ala376Ser missense_variant 0.84
rpsA 1834690 c.1149T>C synonymous_variant 0.87
rpsA 1834733 p.Ala398Pro missense_variant 0.85
rpsA 1834738 c.1197A>G synonymous_variant 0.84
rpsA 1834753 c.1212T>C synonymous_variant 0.82
rpsA 1834759 c.1218A>T synonymous_variant 0.74
rpsA 1834761 p.Phe407Tyr missense_variant 0.74
rpsA 1834765 c.1224A>G synonymous_variant 0.7
rpsA 1834774 c.1233C>T synonymous_variant 0.57
rpsA 1834776 p.Ala412Glu missense_variant 0.5
rpsA 1834780 c.1239A>G synonymous_variant 0.5
rpsA 1834786 c.1245A>G synonymous_variant 0.5
rpsA 1834787 p.Ala416Ser missense_variant 0.5
rpsA 1834792 c.1251G>C synonymous_variant 0.5
rpsA 1834798 c.1257C>G synonymous_variant 0.62
tlyA 1917972 c.33A>G synonymous_variant 1.0
ndh 2101859 p.Ile395Ala missense_variant 0.24
ndh 2101873 c.1170T>C synonymous_variant 0.32
ndh 2101876 c.1167C>G synonymous_variant 0.3
ndh 2101881 p.Ser388Gly missense_variant 0.3
ndh 2101888 p.Val385Leu missense_variant 0.32
ndh 2101891 c.1152C>G synonymous_variant 0.32
ndh 2101894 c.1149T>C synonymous_variant 0.35
ndh 2101906 c.1137G>C synonymous_variant 0.41
ndh 2101915 c.1128T>C synonymous_variant 0.44
ndh 2101920 c.1123A>C synonymous_variant 0.44
ndh 2101924 c.1119T>G synonymous_variant 0.4
ndh 2101939 c.1104A>C synonymous_variant 0.31
ndh 2101960 c.1083A>G synonymous_variant 0.4
ndh 2102233 c.810G>A synonymous_variant 0.3
ndh 2102239 c.804C>G synonymous_variant 0.53
ndh 2102247 p.Val266Ile missense_variant 0.62
ndh 2102248 c.795C>G synonymous_variant 0.62
ndh 2102269 c.774C>G synonymous_variant 0.62
ndh 2102275 c.768C>G synonymous_variant 0.62
ndh 2102281 c.762C>G synonymous_variant 0.56
ndh 2102302 c.741G>C synonymous_variant 0.56
ndh 2102305 c.738T>G synonymous_variant 0.56
ndh 2102308 c.735G>C synonymous_variant 0.56
ndh 2102317 p.Glu242Asp missense_variant 0.47
ndh 2102320 c.723G>C synonymous_variant 0.47
ndh 2102328 p.Leu239Met missense_variant 0.44
ndh 2102337 c.706T>C synonymous_variant 0.18
ndh 2102893 c.150G>C synonymous_variant 0.5
ndh 2102899 c.144T>C synonymous_variant 0.57
ndh 2102908 p.Arg45Lys missense_variant 0.44
ndh 2102911 c.132G>C synonymous_variant 0.5
ndh 2102925 p.Ile40Val missense_variant 0.4
ndh 2102929 c.114T>C synonymous_variant 0.36
ndh 2102953 c.90A>C synonymous_variant 0.33
ndh 2102956 c.87G>T synonymous_variant 0.33
ndh 2102960 p.Asn28Thr missense_variant 0.38
ndh 2102962 c.79_81delCTAinsTTG synonymous_variant 0.38
katG 2155632 c.480A>G synonymous_variant 0.27
katG 2155637 p.Leu159Ile missense_variant 0.35
katG 2155641 p.Lys157Asn missense_variant 0.38
katG 2155655 p.Lys153Gln missense_variant 0.38
katG 2155661 p.Val151Ile missense_variant 0.38
katG 2155680 c.432G>A synonymous_variant 0.39
katG 2155691 c.421T>C synonymous_variant 0.42
katG 2155695 c.417C>G synonymous_variant 0.45
katG 2155716 c.396T>G synonymous_variant 0.51
katG 2155728 c.384G>C synonymous_variant 0.48
katG 2155752 c.360C>T synonymous_variant 0.32
katG 2155758 c.354C>T synonymous_variant 0.35
katG 2155765 p.His116Phe missense_variant 0.35
katG 2155782 c.330C>A synonymous_variant 0.35
katG 2155785 c.327T>C synonymous_variant 0.23
Rv1979c 2223293 c.-129A>G upstream_gene_variant 1.0
pncA 2289909 c.-668G>A upstream_gene_variant 1.0
kasA 2517917 c.-198G>T upstream_gene_variant 0.8
kasA 2517941 c.-174C>G upstream_gene_variant 0.81
kasA 2517974 c.-141T>C upstream_gene_variant 0.74
kasA 2517989 c.-126T>C upstream_gene_variant 0.7
kasA 2517993 c.-122G>A upstream_gene_variant 0.68
kasA 2518019 c.-96A>G upstream_gene_variant 0.42
kasA 2518025 c.-90G>C upstream_gene_variant 0.31
kasA 2518028 c.-87G>A upstream_gene_variant 0.25
kasA 2518132 c.18C>T synonymous_variant 0.58
kasA 2518138 c.24T>C synonymous_variant 0.63
kasA 2518150 c.36C>G synonymous_variant 0.65
kasA 2518152 p.Ser13Asn missense_variant 0.67
kasA 2518156 c.42T>C synonymous_variant 0.67
kasA 2518159 c.45G>C synonymous_variant 0.67
kasA 2518174 c.60A>G synonymous_variant 0.74
kasA 2518180 c.66G>C synonymous_variant 0.77
kasA 2518187 p.Ile25Val missense_variant 0.79
kasA 2518190 p.Ser26Ala missense_variant 0.79
kasA 2518193 p.Pro27Ala missense_variant 0.79
kasA 2518219 c.105T>C synonymous_variant 0.83
kasA 2518223 c.109T>C synonymous_variant 0.79
kasA 2518234 c.120G>A synonymous_variant 0.73
kasA 2518245 p.His44Arg missense_variant 0.67
kasA 2518248 p.Ala45Val missense_variant 0.64
kasA 2518255 c.141A>G synonymous_variant 0.64
kasA 2518258 c.144C>T synonymous_variant 0.61
kasA 2518496 p.Leu128Ala missense_variant 0.26
kasA 2518504 c.390T>C synonymous_variant 0.27
kasA 2518506 p.Ala131Glu missense_variant 0.26
kasA 2518513 c.399C>G synonymous_variant 0.31
kasA 2518519 c.405G>C synonymous_variant 0.36
kasA 2518528 c.414C>G synonymous_variant 0.52
kasA 2518534 c.420G>C synonymous_variant 0.59
kasA 2518540 c.426T>G synonymous_variant 0.62
kasA 2518555 c.441C>G synonymous_variant 0.71
kasA 2518564 c.450C>G synonymous_variant 0.77
kasA 2518567 c.453G>C synonymous_variant 0.77
kasA 2518588 c.474T>G synonymous_variant 0.76
kasA 2518591 c.477G>C synonymous_variant 0.75
kasA 2518595 c.481_483delCGCinsAGG synonymous_variant 0.73
kasA 2518606 c.492G>C synonymous_variant 0.72
kasA 2518609 p.Met165Ile missense_variant 0.72
kasA 2518618 c.504G>C synonymous_variant 0.73
kasA 2518624 c.510C>G synonymous_variant 0.71
kasA 2518636 c.522C>T synonymous_variant 0.61
kasA 2518642 c.528A>G synonymous_variant 0.56
kasA 2518645 c.531G>C synonymous_variant 0.5
kasA 2518656 p.Ala181Gly missense_variant 0.22
kasA 2518663 c.549T>C synonymous_variant 0.2
kasA 2518811 p.Asp233Asn missense_variant 0.23
kasA 2518816 c.702C>T synonymous_variant 0.48
kasA 2518817 p.Asp235Asn missense_variant 0.26
kasA 2518822 c.708C>G synonymous_variant 0.35
kasA 2518825 c.711T>C synonymous_variant 0.52
kasA 2518828 c.714G>C synonymous_variant 0.23
kasA 2518839 p.Ala242Gly missense_variant 0.31
kasA 2518843 c.729T>C synonymous_variant 0.28
kasA 2518849 c.735G>C synonymous_variant 0.25
kasA 2518853 p.Leu247Ile missense_variant 0.4
kasA 2518864 c.750G>C synonymous_variant 0.62
kasA 2518867 c.753G>A synonymous_variant 0.27
kasA 2518873 c.759C>T synonymous_variant 0.28
kasA 2518879 c.765A>G synonymous_variant 0.56
kasA 2518885 c.771T>C synonymous_variant 0.45
kasA 2519137 c.1023T>G synonymous_variant 0.57
kasA 2519143 c.1029G>C synonymous_variant 0.64
kasA 2519152 c.1038G>C synonymous_variant 0.67
kasA 2519158 c.1044C>A synonymous_variant 0.73
kasA 2519173 c.1059C>G synonymous_variant 0.69
kasA 2519182 c.1068G>C synonymous_variant 0.72
kasA 2519185 c.1071C>G synonymous_variant 0.71
kasA 2519188 c.1074G>C synonymous_variant 0.72
kasA 2519194 c.1080G>C synonymous_variant 0.71
kasA 2519195 p.Thr361Ser missense_variant 0.71
kasA 2519203 c.1089C>T synonymous_variant 0.67
kasA 2519224 c.1110C>A synonymous_variant 0.61
kasA 2519239 c.1125A>G synonymous_variant 0.45
kasA 2519248 c.1134C>T synonymous_variant 0.3
ahpC 2726576 p.Asp128Glu missense_variant 0.38
ahpC 2726579 c.387T>C synonymous_variant 0.41
ahpC 2726582 c.390G>C synonymous_variant 0.52
ahpC 2726593 p.Val134Ala missense_variant 0.7
ahpC 2726600 c.408T>C synonymous_variant 0.73
ahpC 2726612 c.420C>G synonymous_variant 0.75
ahpC 2726633 c.441C>G synonymous_variant 0.78
ahpC 2726638 p.Ala149Val missense_variant 0.79
ahpC 2726648 c.456T>C synonymous_variant 0.79
ahpC 2726657 c.465A>C synonymous_variant 0.79
ahpC 2726669 c.477T>C synonymous_variant 0.74
ahpC 2726675 c.483A>G synonymous_variant 0.7
ahpC 2726681 c.489A>G synonymous_variant 0.66
ahpC 2726693 c.501C>G synonymous_variant 0.48
ahpC 2726696 c.504C>G synonymous_variant 0.4
folC 2746632 p.Gly323Ser missense_variant 0.36
folC 2746642 c.957T>C synonymous_variant 0.63
folC 2746651 c.948T>C synonymous_variant 0.69
folC 2746663 c.936T>C synonymous_variant 0.69
folC 2746666 c.933C>G synonymous_variant 0.69
folC 2746677 p.Ser308Ala missense_variant 0.65
folC 2746678 c.921T>G synonymous_variant 0.65
folC 2746684 c.915C>G synonymous_variant 0.67
folC 2746687 c.912C>G synonymous_variant 0.67
folC 2746690 p.Val303Ala missense_variant 0.69
folC 2746693 c.906G>C synonymous_variant 0.7
folC 2746714 c.885T>C synonymous_variant 0.74
folC 2746728 c.871T>C synonymous_variant 0.66
folC 2746730 p.Tyr290Phe missense_variant 0.68
folC 2746744 p.Val285Leu missense_variant 0.48
folC 2746756 c.843C>G synonymous_variant 0.31
folC 2746765 p.Gln278Glu missense_variant 0.31
folC 2746771 p.Val276Leu missense_variant 0.33
folC 2746777 c.822T>G synonymous_variant 0.31
Rv2752c 3064974 c.1218T>C synonymous_variant 0.38
Rv2752c 3064980 c.1212C>G synonymous_variant 0.52
Rv2752c 3064998 c.1194A>C synonymous_variant 0.53
Rv2752c 3065007 c.1185G>C synonymous_variant 0.55
Rv2752c 3065028 c.1164G>T synonymous_variant 0.57
Rv2752c 3065031 c.1161G>C synonymous_variant 0.57
Rv2752c 3065048 c.1144C>T synonymous_variant 0.45
Rv2752c 3065064 c.1128G>C synonymous_variant 0.48
Rv2752c 3065070 c.1122C>G synonymous_variant 0.45
Rv2752c 3065079 c.1113T>C synonymous_variant 0.25
Rv2752c 3065937 c.255C>T synonymous_variant 0.22
Rv2752c 3066243 c.-52C>A upstream_gene_variant 0.2
Rv2752c 3066269 c.-78A>C upstream_gene_variant 0.42
Rv2752c 3066270 c.-79G>A upstream_gene_variant 0.42
Rv2752c 3066274 c.-83A>T upstream_gene_variant 0.42
Rv2752c 3066276 c.-85G>C upstream_gene_variant 0.42
Rv2752c 3066279 c.-88A>G upstream_gene_variant 0.39
Rv2752c 3066287 c.-96G>C upstream_gene_variant 0.35
Rv2752c 3066288 c.-97G>A upstream_gene_variant 0.37
Rv2752c 3066302 c.-111C>A upstream_gene_variant 0.41
Rv2752c 3066303 c.-112C>G upstream_gene_variant 0.41
Rv2752c 3066309 c.-118T>C upstream_gene_variant 0.41
Rv2752c 3066313 c.-122T>C upstream_gene_variant 0.41
Rv2752c 3066315 c.-124C>A upstream_gene_variant 0.41
Rv2752c 3066320 c.-129A>T upstream_gene_variant 0.42
Rv2752c 3066335 c.-144T>C upstream_gene_variant 0.37
Rv2752c 3066336 c.-145C>G upstream_gene_variant 0.37
thyX 3067619 c.327A>G synonymous_variant 0.2
thyX 3067622 c.324C>T synonymous_variant 0.2
thyX 3067646 c.300C>G synonymous_variant 0.22
thyX 3067673 c.273C>T synonymous_variant 0.36
thyX 3067682 c.264G>C synonymous_variant 0.36
thyX 3067685 c.261A>C synonymous_variant 0.38
thyX 3067688 c.258G>C synonymous_variant 0.36
thyX 3067709 c.237G>C synonymous_variant 0.27
thyX 3067712 c.234G>C synonymous_variant 0.27
thyX 3067715 c.229_231delAGCinsTCG synonymous_variant 0.25
thyX 3067718 c.228C>G synonymous_variant 0.25
thyX 3067721 c.225T>C synonymous_variant 0.27
thyX 3067727 c.219A>C synonymous_variant 0.27
thyX 3067742 c.204A>G synonymous_variant 0.23
thyX 3067748 c.198C>T synonymous_variant 0.21
thyA 3073827 c.645A>G synonymous_variant 0.33
thyA 3073839 c.633T>C synonymous_variant 0.5
thyA 3073863 c.609T>C synonymous_variant 0.79
thyA 3073868 p.Thr202Ala missense_variant 0.2
thyA 3073872 c.600C>T synonymous_variant 0.8
thyA 3073888 p.Ser195Glu missense_variant 0.73
thyA 3073890 c.580_582delTTGinsCTC synonymous_variant 0.73
thyA 3073893 c.579C>A synonymous_variant 0.73
thyA 3073902 c.570C>G synonymous_variant 0.72
thyA 3073905 c.567C>G synonymous_variant 0.72
thyA 3073920 c.552C>G synonymous_variant 0.75
thyA 3073929 c.543T>C synonymous_variant 0.74
thyA 3073953 c.519T>G synonymous_variant 0.68
thyA 3073956 c.516G>C synonymous_variant 0.63
thyA 3073959 c.513T>C synonymous_variant 0.6
thyA 3073977 c.495A>G synonymous_variant 0.57
thyA 3073980 c.492C>T synonymous_variant 0.61
thyA 3073983 c.489C>G synonymous_variant 0.61
thyA 3073989 c.483T>C synonymous_variant 0.57
thyA 3073992 c.478_480delAGCinsTCG synonymous_variant 0.57
thyA 3073999 p.Arg158Lys missense_variant 0.55
thyA 3074004 c.468T>C synonymous_variant 0.57
thyA 3074031 c.441T>C synonymous_variant 0.5
thyA 3074034 c.438T>C synonymous_variant 0.49
thyA 3074046 c.426G>C synonymous_variant 0.32
thyA 3074053 p.Arg140Gln missense_variant 0.32
thyA 3074056 p.Glu139Pro missense_variant 0.35
thyA 3074061 c.411A>G synonymous_variant 0.3
thyA 3074082 c.390G>T synonymous_variant 0.29
thyA 3074089 p.Ile128Asn missense_variant 0.28
thyA 3074094 c.378G>C synonymous_variant 0.27
thyA 3074097 c.375C>G synonymous_variant 0.24
thyA 3074100 c.372T>C synonymous_variant 0.2
thyA 3074331 c.141C>G synonymous_variant 0.27
thyA 3074334 c.138T>C synonymous_variant 0.29
thyA 3074339 p.Leu45Ile missense_variant 0.33
thyA 3074346 c.126C>T synonymous_variant 0.33
thyA 3074357 p.Ser39Ala missense_variant 0.33
thyA 3074360 c.112T>C synonymous_variant 0.33
thyA 3074361 c.111T>C synonymous_variant 0.31
thyA 3074364 c.108T>C synonymous_variant 0.29
thyA 3074376 p.Gln32His missense_variant 0.39
thyA 3074387 p.Leu29Val missense_variant 0.39
thyA 3074397 c.75A>C synonymous_variant 0.33
thyA 3074418 c.54A>G synonymous_variant 0.33
ald 3086788 c.-32T>C upstream_gene_variant 1.0
ald 3087173 c.354G>A synonymous_variant 0.25
ald 3087197 c.378A>C synonymous_variant 0.33
ald 3087200 c.381A>T synonymous_variant 0.33
ald 3087209 c.390T>G synonymous_variant 0.24
ald 3087210 p.Ala131Ser missense_variant 0.25
ald 3087237 p.Leu140Phe missense_variant 0.2
ald 3087251 c.432T>C synonymous_variant 0.29
ald 3087257 c.438T>G synonymous_variant 0.42
ald 3087272 c.453A>C synonymous_variant 0.42
ald 3087274 p.Thr152Ser missense_variant 0.39
ald 3087278 p.Gln153His missense_variant 0.39
ald 3087281 c.462G>C synonymous_variant 0.4
ald 3087284 c.465C>G synonymous_variant 0.4
ald 3087290 c.471T>C synonymous_variant 0.44
ald 3087311 c.492C>G synonymous_variant 0.48
ald 3087314 c.495C>G synonymous_variant 0.46
ald 3087317 c.498C>G synonymous_variant 0.48
ald 3087319 p.Glu167Ala missense_variant 0.48
ald 3087323 c.504G>C synonymous_variant 0.48
ald 3087335 c.516G>C synonymous_variant 0.5
ald 3087346 p.Ala176Gly missense_variant 0.46
ald 3087356 c.537C>G synonymous_variant 0.26
ald 3087368 c.549A>C synonymous_variant 0.29
fprA 3473843 c.-164C>G upstream_gene_variant 0.54
fprA 3473848 c.-159_-157delCAAinsAAG upstream_gene_variant 0.5
fprA 3473859 c.-148T>G upstream_gene_variant 0.53
fprA 3473875 c.-132G>A upstream_gene_variant 0.3
fprA 3473878 c.-129G>A upstream_gene_variant 0.25
fprA 3473996 c.-11_-10insA upstream_gene_variant 1.0
Rv3236c 3612009 p.Ala370Thr missense_variant 1.0
alr 3840719 c.702A>G synonymous_variant 1.0
rpoA 3877542 c.966C>T synonymous_variant 0.58
rpoA 3877545 c.963G>C synonymous_variant 0.58
rpoA 3877554 c.954G>C synonymous_variant 0.58
rpoA 3877557 c.951C>G synonymous_variant 0.58
rpoA 3877565 c.942delC frameshift_variant 0.57
rpoA 3877568 p.Ser314Arg missense_variant 0.57
rpoA 3877569 c.939G>T synonymous_variant 0.57
rpoA 3877572 c.935dupC frameshift_variant 0.6
rpoA 3877587 c.921A>G synonymous_variant 0.71
rpoA 3877590 c.918G>A synonymous_variant 0.74
rpoA 3877638 c.870T>C synonymous_variant 0.88
rpoA 3877656 c.852T>G synonymous_variant 0.82
rpoA 3877662 c.846C>T synonymous_variant 0.83
rpoA 3877668 c.840A>G synonymous_variant 0.82
rpoA 3877671 c.837C>G synonymous_variant 0.81
rpoA 3877677 c.831G>T synonymous_variant 0.81
rpoA 3877680 c.828G>C synonymous_variant 0.8
rpoA 3877704 c.804G>T synonymous_variant 0.8
rpoA 3877728 c.780C>G synonymous_variant 0.79
rpoA 3877737 c.771G>A synonymous_variant 0.76
rpoA 3877740 c.768G>C synonymous_variant 0.75
rpoA 3877743 c.765T>C synonymous_variant 0.78
rpoA 3877749 c.759C>T synonymous_variant 0.83
rpoA 3877764 c.744C>G synonymous_variant 0.8
rpoA 3877776 c.732T>C synonymous_variant 0.82
rpoA 3877782 c.726T>C synonymous_variant 0.83
rpoA 3877803 c.705G>C synonymous_variant 0.87
rpoA 3877818 c.690A>G synonymous_variant 0.84
rpoA 3877848 c.660C>T synonymous_variant 0.82
rpoA 3877857 c.651G>A synonymous_variant 0.82
rpoA 3877875 c.633T>G synonymous_variant 0.82
rpoA 3877881 c.627G>A synonymous_variant 0.83
rpoA 3877884 c.624G>C synonymous_variant 0.82
rpoA 3877893 c.615C>T synonymous_variant 0.83
rpoA 3877900 p.Ser203Thr missense_variant 0.83
rpoA 3877905 c.603A>G synonymous_variant 0.81
rpoA 3877908 c.600T>C synonymous_variant 0.81
rpoA 3877920 c.588G>C synonymous_variant 0.85
rpoA 3877926 c.582G>C synonymous_variant 0.84
rpoA 3877962 c.546G>C synonymous_variant 0.69
rpoA 3877971 p.Asp179Glu missense_variant 0.67
rpoA 3877986 c.522G>C synonymous_variant 0.61
rpoA 3877989 c.519A>G synonymous_variant 0.57
rpoA 3878001 c.507A>G synonymous_variant 0.54
rpoA 3878010 c.498C>G synonymous_variant 0.36
rpoA 3878019 c.489A>G synonymous_variant 0.2
rpoA 3878094 c.414C>G synonymous_variant 0.2
rpoA 3878100 c.408C>G synonymous_variant 0.2
rpoA 3878118 c.390T>C synonymous_variant 0.39
rpoA 3878124 c.384G>C synonymous_variant 0.35
rpoA 3878127 c.381G>C synonymous_variant 0.35
rpoA 3878142 p.Gly122Glu missense_variant 0.38
rpoA 3878157 c.351C>G synonymous_variant 0.57
rpoA 3878160 c.348C>G synonymous_variant 0.58
rpoA 3878175 c.333G>T synonymous_variant 0.75
rpoA 3878184 c.324C>T synonymous_variant 0.74
rpoA 3878187 c.321C>G synonymous_variant 0.76
rpoA 3878193 c.315T>C synonymous_variant 0.76
rpoA 3878205 c.303T>C synonymous_variant 0.74
rpoA 3878217 c.291A>G synonymous_variant 0.77
rpoA 3878244 c.264G>A synonymous_variant 0.8
rpoA 3878250 c.258C>G synonymous_variant 0.74
rpoA 3878253 c.255G>C synonymous_variant 0.73
rpoA 3878256 c.252G>C synonymous_variant 0.74
rpoA 3878264 p.Ser82Gly missense_variant 0.71
rpoA 3878271 c.237T>C synonymous_variant 0.7
rpoA 3878283 p.Glu75Asp missense_variant 0.66
rpoA 3878292 c.216T>C synonymous_variant 0.59
rpoA 3878298 c.210A>G synonymous_variant 0.57
rpoA 3878304 c.204G>T synonymous_variant 0.56
rpoA 3878322 c.186A>G synonymous_variant 0.45
rpoA 3878331 c.177A>G synonymous_variant 0.38
rpoA 3878334 c.174T>G synonymous_variant 0.38
rpoA 3878337 c.171T>C synonymous_variant 0.38
rpoA 3878346 c.162T>C synonymous_variant 0.41
rpoA 3878358 c.150C>G synonymous_variant 0.42
rpoA 3878364 c.144A>C synonymous_variant 0.33
rpoA 3878367 c.141C>G synonymous_variant 0.32
rpoA 3878370 c.138T>C synonymous_variant 0.3
rpoA 3878373 c.135G>C synonymous_variant 0.3
rpoA 3878385 c.123C>G synonymous_variant 0.3
rpoA 3878391 c.117T>G synonymous_variant 0.26
rpoA 3878394 c.114G>T synonymous_variant 0.28
rpoA 3878406 c.102G>T synonymous_variant 0.29
rpoA 3878415 c.93C>T synonymous_variant 0.27
rpoA 3878421 c.87A>T synonymous_variant 0.25
rpoA 3878424 c.84G>C synonymous_variant 0.25
rpoA 3878433 c.75G>C synonymous_variant 0.31
ddn 3986648 c.-196C>G upstream_gene_variant 0.73
ddn 3986661 c.-183C>A upstream_gene_variant 0.65
ddn 3986667 c.-177_-176delCTinsAC upstream_gene_variant 0.6
ddn 3986681 c.-163C>G upstream_gene_variant 0.6
ddn 3986687 c.-157C>T upstream_gene_variant 0.58
ddn 3986690 c.-154C>G upstream_gene_variant 0.56
ddn 3986696 c.-148G>T upstream_gene_variant 0.55
ddn 3986699 c.-145C>G upstream_gene_variant 0.56
ddn 3986714 c.-130C>G upstream_gene_variant 0.32
clpC1 4038248 c.2457C>G synonymous_variant 0.25
clpC1 4038271 p.Pro812Ala missense_variant 0.34
clpC1 4038272 p.Gly811Ser missense_variant 0.33
clpC1 4038278 c.2427T>C synonymous_variant 0.33
clpC1 4038287 c.2418C>T synonymous_variant 0.58
clpC1 4038293 c.2412G>C synonymous_variant 0.42
clpC1 4038302 c.2403C>G synonymous_variant 0.44
clpC1 4038308 p.Val799Leu missense_variant 0.45
clpC1 4038314 c.2391T>G synonymous_variant 0.42
clpC1 4038317 c.2388G>C synonymous_variant 0.42
clpC1 4038320 c.2385G>T synonymous_variant 0.42
clpC1 4038325 p.Val794Ile missense_variant 0.45
clpC1 4038335 c.2370C>G synonymous_variant 0.44
clpC1 4038350 c.2355C>G synonymous_variant 0.62
clpC1 4038356 c.2349T>C synonymous_variant 0.66
clpC1 4038359 c.2346A>G synonymous_variant 0.66
clpC1 4038368 c.2337T>C synonymous_variant 0.68
clpC1 4038374 c.2331C>T synonymous_variant 0.66
clpC1 4038388 c.2317T>C synonymous_variant 0.59
clpC1 4038392 c.2313C>G synonymous_variant 0.59
clpC1 4038395 c.2310C>G synonymous_variant 0.59
clpC1 4038398 c.2307G>C synonymous_variant 0.59
clpC1 4038401 c.2302_2304delTTGinsCTC synonymous_variant 0.59
clpC1 4038407 c.2298G>C synonymous_variant 0.57
clpC1 4038416 c.2289C>G synonymous_variant 0.62
clpC1 4038419 c.2286T>C synonymous_variant 0.65
clpC1 4038499 p.Ser736Gly missense_variant 0.53
clpC1 4038508 c.2197C>T synonymous_variant 0.62
clpC1 4038509 c.2196C>T synonymous_variant 0.67
clpC1 4038530 p.Glu725Asp missense_variant 0.77
clpC1 4038587 c.2116_2118delCGCinsAGG synonymous_variant 0.79
clpC1 4038596 c.2109A>G synonymous_variant 0.8
clpC1 4038623 c.2082A>G synonymous_variant 0.73
clpC1 4038640 p.Asp689Asn missense_variant 0.69
clpC1 4038650 c.2055C>T synonymous_variant 0.62
clpC1 4038653 c.2052C>T synonymous_variant 0.62
clpC1 4038657 p.Lys683Pro missense_variant 0.59
clpC1 4038659 c.2046C>G synonymous_variant 0.61
clpC1 4038662 c.2043T>C synonymous_variant 0.64
clpC1 4038671 c.2034T>G synonymous_variant 0.71
clpC1 4038679 p.Pro676Ala missense_variant 0.69
clpC1 4038683 c.2022T>C synonymous_variant 0.72
clpC1 4038695 c.2010C>G synonymous_variant 0.78
clpC1 4038704 c.2001T>C synonymous_variant 0.74
clpC1 4038707 c.1998C>G synonymous_variant 0.76
clpC1 4038713 c.1992T>C synonymous_variant 0.77
clpC1 4038740 c.1965G>C synonymous_variant 0.82
clpC1 4038749 c.1956C>A synonymous_variant 0.84
clpC1 4038755 c.1950G>T synonymous_variant 0.85
clpC1 4038764 c.1941C>G synonymous_variant 0.84
clpC1 4038767 c.1938G>C synonymous_variant 0.84
clpC1 4038773 c.1932T>C synonymous_variant 0.85
clpC1 4038782 c.1923G>T synonymous_variant 0.89
clpC1 4038790 c.1915C>T synonymous_variant 0.89
clpC1 4038812 c.1893T>C synonymous_variant 0.88
clpC1 4038842 c.1863G>C synonymous_variant 0.84
clpC1 4038878 c.1827A>G synonymous_variant 0.79
clpC1 4038905 c.1800A>C synonymous_variant 0.74
clpC1 4038908 c.1797C>G synonymous_variant 0.7
clpC1 4038911 c.1794G>T synonymous_variant 0.69
clpC1 4038914 c.1791G>C synonymous_variant 0.68
clpC1 4038917 c.1788C>T synonymous_variant 0.68
clpC1 4038923 c.1782A>G synonymous_variant 0.72
clpC1 4038932 c.1773G>C synonymous_variant 0.72
clpC1 4038941 c.1764G>C synonymous_variant 0.73
clpC1 4038953 c.1752A>G synonymous_variant 0.74
clpC1 4038956 c.1749T>C synonymous_variant 0.74
clpC1 4038965 c.1740T>C synonymous_variant 0.74
clpC1 4038971 c.1734T>C synonymous_variant 0.76
clpC1 4038974 c.1731T>C synonymous_variant 0.75
clpC1 4038989 c.1716T>C synonymous_variant 0.73
clpC1 4038997 c.1708T>C synonymous_variant 0.73
clpC1 4039022 c.1683A>G synonymous_variant 0.79
clpC1 4039025 c.1680C>G synonymous_variant 0.8
clpC1 4039064 c.1641C>T synonymous_variant 0.79
clpC1 4039067 c.1638G>C synonymous_variant 0.78
clpC1 4039073 c.1632C>T synonymous_variant 0.78
clpC1 4039079 c.1626C>G synonymous_variant 0.76
clpC1 4039082 c.1623C>T synonymous_variant 0.74
clpC1 4039085 c.1620A>G synonymous_variant 0.74
clpC1 4039091 c.1614G>C synonymous_variant 0.77
clpC1 4039097 c.1608G>C synonymous_variant 0.8
clpC1 4039112 c.1593C>G synonymous_variant 0.77
clpC1 4039118 c.1587C>G synonymous_variant 0.76
clpC1 4039121 c.1584T>C synonymous_variant 0.74
clpC1 4039142 c.1563A>G synonymous_variant 0.75
clpC1 4039145 c.1560G>C synonymous_variant 0.77
clpC1 4039169 c.1536A>G synonymous_variant 0.75
clpC1 4039172 c.1533A>G synonymous_variant 0.75
clpC1 4039178 c.1527G>C synonymous_variant 0.74
clpC1 4039183 c.1522T>C synonymous_variant 0.76
clpC1 4039190 c.1515C>T synonymous_variant 0.7
clpC1 4039193 c.1512C>G synonymous_variant 0.68
clpC1 4039199 p.Ala502Glu missense_variant 0.64
clpC1 4039208 c.1497C>G synonymous_variant 0.64
clpC1 4039220 c.1485G>C synonymous_variant 0.6
clpC1 4039226 c.1479T>C synonymous_variant 0.62
clpC1 4039241 c.1464G>C synonymous_variant 0.57
clpC1 4039259 c.1446G>A synonymous_variant 0.44
clpC1 4039268 c.1437C>T synonymous_variant 0.43
clpC1 4039274 c.1431G>C synonymous_variant 0.43
clpC1 4039277 c.1428C>G synonymous_variant 0.44
clpC1 4039280 c.1425G>C synonymous_variant 0.44
clpC1 4039286 c.1419T>C synonymous_variant 0.5
clpC1 4039292 c.1413C>T synonymous_variant 0.5
clpC1 4039298 c.1407T>C synonymous_variant 0.56
clpC1 4039310 c.1395A>G synonymous_variant 0.59
clpC1 4039316 c.1389G>A synonymous_variant 0.52
clpC1 4039319 c.1386T>C synonymous_variant 0.52
clpC1 4039322 c.1383T>C synonymous_variant 0.52
clpC1 4039334 c.1371G>C synonymous_variant 0.41
clpC1 4039338 p.Thr456Gln missense_variant 0.43
clpC1 4039347 p.Arg453Lys missense_variant 0.39
clpC1 4039349 c.1356C>T synonymous_variant 0.41
clpC1 4039361 c.1344C>A synonymous_variant 0.46
clpC1 4039364 c.1341C>G synonymous_variant 0.5
clpC1 4039382 c.1323C>G synonymous_variant 0.52
clpC1 4039391 c.1314T>G synonymous_variant 0.58
clpC1 4039394 c.1311G>C synonymous_variant 0.58
clpC1 4039397 c.1308A>G synonymous_variant 0.59
clpC1 4039409 c.1296T>C synonymous_variant 0.63
clpC1 4039412 c.1293T>C synonymous_variant 0.64
clpC1 4039415 p.Glu430Asp missense_variant 0.65
clpC1 4039430 c.1275T>C synonymous_variant 0.7
clpC1 4039442 c.1263A>G synonymous_variant 0.75
clpC1 4039466 c.1239T>G synonymous_variant 0.83
clpC1 4039469 c.1236T>C synonymous_variant 0.83
clpC1 4039481 c.1224T>C synonymous_variant 0.85
clpC1 4039484 c.1221T>C synonymous_variant 0.83
clpC1 4039487 c.1218G>C synonymous_variant 0.81
clpC1 4039517 c.1188C>G synonymous_variant 0.81
clpC1 4039556 c.1149G>C synonymous_variant 0.83
clpC1 4039559 c.1146C>G synonymous_variant 0.83
clpC1 4039562 c.1143C>G synonymous_variant 0.84
clpC1 4039565 c.1140G>C synonymous_variant 0.84
clpC1 4039576 p.Ala377Ser missense_variant 0.83
clpC1 4039589 c.1116G>C synonymous_variant 0.87
clpC1 4039592 c.1113G>C synonymous_variant 0.86
clpC1 4039616 c.1089G>C synonymous_variant 0.85
clpC1 4039619 c.1086G>T synonymous_variant 0.85
clpC1 4039622 c.1083C>G synonymous_variant 0.85
clpC1 4039628 c.1077C>G synonymous_variant 0.86
clpC1 4039649 c.1056G>C synonymous_variant 0.83
clpC1 4039652 c.1053G>C synonymous_variant 0.83
clpC1 4039655 c.1050G>C synonymous_variant 0.83
clpC1 4039661 c.1044T>C synonymous_variant 0.84
clpC1 4039664 c.1041G>C synonymous_variant 0.84
clpC1 4039670 c.1035G>C synonymous_variant 0.86
clpC1 4039682 c.1023C>G synonymous_variant 0.83
clpC1 4039691 c.1014G>C synonymous_variant 0.77
clpC1 4039694 c.1011G>C synonymous_variant 0.78
clpC1 4039724 c.981A>G synonymous_variant 0.81
clpC1 4039733 c.972G>A synonymous_variant 0.78
clpC1 4039739 c.966C>G synonymous_variant 0.78
clpC1 4039748 c.957G>C synonymous_variant 0.73
clpC1 4039751 c.954A>G synonymous_variant 0.69
clpC1 4039756 c.949C>T synonymous_variant 0.67
clpC1 4039757 c.948A>G synonymous_variant 0.67
clpC1 4039760 c.945T>C synonymous_variant 0.66
clpC1 4039769 c.936C>G synonymous_variant 0.7
clpC1 4039778 c.927A>G synonymous_variant 0.69
clpC1 4039783 c.922C>T synonymous_variant 0.7
clpC1 4039790 c.915C>G synonymous_variant 0.71
clpC1 4039817 c.888A>T synonymous_variant 0.65
clpC1 4039820 c.885T>G synonymous_variant 0.63
clpC1 4039823 c.882T>G synonymous_variant 0.63
clpC1 4039826 c.879C>G synonymous_variant 0.64
clpC1 4039829 c.874_876delTTGinsCTC synonymous_variant 0.65
clpC1 4039832 c.873C>G synonymous_variant 0.65
clpC1 4039850 c.855T>C synonymous_variant 0.77
clpC1 4039865 c.840T>C synonymous_variant 0.75
clpC1 4039874 c.831C>T synonymous_variant 0.77
clpC1 4039898 c.807C>G synonymous_variant 0.81
clpC1 4039901 c.804C>G synonymous_variant 0.8
clpC1 4039904 c.801A>G synonymous_variant 0.82
clpC1 4039907 c.798G>A synonymous_variant 0.83
clpC1 4039922 c.783C>T synonymous_variant 0.85
clpC1 4039925 c.780C>G synonymous_variant 0.86
clpC1 4039931 c.774T>C synonymous_variant 0.84
clpC1 4039946 c.759A>G synonymous_variant 0.82
clpC1 4039952 c.753T>C synonymous_variant 0.81
clpC1 4039955 c.750G>C synonymous_variant 0.82
clpC1 4039958 c.747G>C synonymous_variant 0.83
clpC1 4039988 c.717C>G synonymous_variant 0.79
clpC1 4039991 c.714G>C synonymous_variant 0.79
clpC1 4040018 c.687G>C synonymous_variant 0.74
clpC1 4040021 c.684A>C synonymous_variant 0.74
clpC1 4040024 c.681A>G synonymous_variant 0.72
clpC1 4040033 c.672G>C synonymous_variant 0.74
clpC1 4040048 c.657C>T synonymous_variant 0.75
clpC1 4040090 c.613_615delTCTinsAGC synonymous_variant 0.76
clpC1 4040093 c.612C>G synonymous_variant 0.75
clpC1 4040105 c.600C>G synonymous_variant 0.79
clpC1 4040123 c.582G>A synonymous_variant 0.8
clpC1 4040144 c.561G>C synonymous_variant 0.68
clpC1 4040147 c.558A>G synonymous_variant 0.68
clpC1 4040153 c.552A>G synonymous_variant 0.73
clpC1 4040162 c.543G>C synonymous_variant 0.69
clpC1 4040168 c.537G>C synonymous_variant 0.72
clpC1 4040171 c.534C>G synonymous_variant 0.75
clpC1 4040200 c.505T>C synonymous_variant 0.62
clpC1 4040201 c.504C>G synonymous_variant 0.61
clpC1 4040204 c.501G>C synonymous_variant 0.62
clpC1 4040207 c.498T>G synonymous_variant 0.62
clpC1 4040214 p.Ser164Asn missense_variant 0.62
clpC1 4040221 p.Ser162Ala missense_variant 0.68
clpC1 4040225 c.480A>T synonymous_variant 0.69
clpC1 4040228 c.477G>T synonymous_variant 0.73
clpC1 4040249 c.456A>G synonymous_variant 0.77
clpC1 4040252 c.453C>G synonymous_variant 0.75
clpC1 4040257 p.Ala150Thr missense_variant 0.74
clpC1 4040267 c.438A>G synonymous_variant 0.73
clpC1 4040270 c.435C>T synonymous_variant 0.71
clpC1 4040273 c.432T>C synonymous_variant 0.71
clpC1 4040276 c.429C>G synonymous_variant 0.69
clpC1 4040279 c.426C>G synonymous_variant 0.7
clpC1 4040291 c.414G>C synonymous_variant 0.73
clpC1 4040306 c.399G>C synonymous_variant 0.79
clpC1 4040312 c.393G>C synonymous_variant 0.82
clpC1 4040348 c.357G>C synonymous_variant 0.77
clpC1 4040354 c.351A>G synonymous_variant 0.76
clpC1 4040357 c.348T>C synonymous_variant 0.76
clpC1 4040363 c.342A>T synonymous_variant 0.74
clpC1 4040375 c.330G>C synonymous_variant 0.72
clpC1 4040380 c.325T>C synonymous_variant 0.73
clpC1 4040381 c.324T>C synonymous_variant 0.72
clpC1 4040387 c.318A>G synonymous_variant 0.71
clpC1 4040393 c.312G>C synonymous_variant 0.69
clpC1 4040408 c.297C>T synonymous_variant 0.46
clpC1 4040411 c.294T>C synonymous_variant 0.38
clpC1 4040414 c.291G>A synonymous_variant 0.38
clpC1 4040435 c.270G>C synonymous_variant 0.18
clpC1 4040441 c.264C>G synonymous_variant 0.26
clpC1 4040444 c.261C>G synonymous_variant 0.3
clpC1 4040450 c.255A>G synonymous_variant 0.48
clpC1 4040459 c.246C>G synonymous_variant 0.58
clpC1 4040465 c.240T>C synonymous_variant 0.63
clpC1 4040471 c.234T>C synonymous_variant 0.63
clpC1 4040477 c.228G>C synonymous_variant 0.59
clpC1 4040480 c.225T>G synonymous_variant 0.63
clpC1 4040522 c.183T>C synonymous_variant 0.74
clpC1 4040528 c.177G>A synonymous_variant 0.71
clpC1 4040531 c.174T>C synonymous_variant 0.71
clpC1 4040537 c.168G>C synonymous_variant 0.73
clpC1 4040546 c.159G>C synonymous_variant 0.71
clpC1 4040551 c.154T>C synonymous_variant 0.68
clpC1 4040561 c.144A>G synonymous_variant 0.61
clpC1 4040570 c.135C>G synonymous_variant 0.52
clpC1 4040573 c.132T>A synonymous_variant 0.52
clpC1 4040582 c.123G>T synonymous_variant 0.26
clpC1 4040585 c.120A>G synonymous_variant 0.25
clpC1 4040588 c.117T>C synonymous_variant 0.25
clpC1 4040591 c.114C>T synonymous_variant 0.25
clpC1 4040594 c.111G>C synonymous_variant 0.26
clpC1 4040597 c.108C>A synonymous_variant 0.28
clpC1 4040600 c.105A>G synonymous_variant 0.29
clpC1 4040603 c.102T>G synonymous_variant 0.35
clpC1 4040606 c.99T>C synonymous_variant 0.38
clpC1 4040644 c.61A>C synonymous_variant 0.52
clpC1 4040654 c.51G>A synonymous_variant 0.52
clpC1 4040690 c.15T>C synonymous_variant 0.52
clpC1 4040695 c.10C>A synonymous_variant 0.5
clpC1 4040696 c.9A>G synonymous_variant 0.48
clpC1 4040699 c.6C>T synonymous_variant 0.48
clpC1 4040711 c.-7G>A upstream_gene_variant 0.39
panD 4044165 c.117G>C synonymous_variant 0.2
panD 4044168 c.114G>A synonymous_variant 0.33
panD 4044180 p.Asp34Glu missense_variant 0.58
panD 4044188 c.94T>C synonymous_variant 0.66
panD 4044195 c.87T>C synonymous_variant 0.7
panD 4044210 c.72C>G synonymous_variant 0.67
panD 4044213 c.69C>A synonymous_variant 0.67
panD 4044225 c.57C>T synonymous_variant 0.65
panD 4044231 p.Cys17Lys missense_variant 0.65
panD 4044237 c.45G>C synonymous_variant 0.65
panD 4044270 c.12G>A synonymous_variant 0.62
panD 4044287 c.-6A>G upstream_gene_variant 0.43
embC 4240717 c.855T>C synonymous_variant 0.4
embC 4240726 c.864G>C synonymous_variant 0.54
embC 4240736 p.Ser292Ala missense_variant 0.58
embC 4240759 c.897C>G synonymous_variant 0.72
embC 4240765 c.903C>G synonymous_variant 0.72
embC 4240780 c.918T>C synonymous_variant 0.71
embC 4240783 c.921G>C synonymous_variant 0.73
embC 4240789 c.927T>C synonymous_variant 0.74
embC 4240795 c.933C>G synonymous_variant 0.74
embC 4240819 c.957A>C synonymous_variant 0.65
embC 4240822 c.960C>G synonymous_variant 0.62
embC 4240825 c.963G>A synonymous_variant 0.61
embC 4240826 p.Ala322Ser missense_variant 0.6
embC 4240831 c.969T>G synonymous_variant 0.6
embC 4240858 c.996G>A synonymous_variant 0.47
embC 4240859 c.997C>T synonymous_variant 0.44
embC 4240867 c.1005T>A synonymous_variant 0.4
embC 4240870 c.1008T>C synonymous_variant 0.43
embC 4240880 p.Ala340His missense_variant 0.28
embC 4240885 c.1023T>C synonymous_variant 0.29
embC 4240886 p.Ile342Val missense_variant 0.29
embC 4240900 c.1038A>G synonymous_variant 0.2
embC 4241038 c.1176G>C synonymous_variant 0.32
embC 4241039 p.Asp393Asn missense_variant 0.32
embC 4241047 c.1185C>G synonymous_variant 0.33
embC 4241050 c.1188T>G synonymous_variant 0.32
embC 4241059 c.1197G>A synonymous_variant 0.35
embC 4241068 c.1206C>T synonymous_variant 0.3
embC 4241071 c.1209C>G synonymous_variant 0.33
embC 4241083 c.1221G>C synonymous_variant 0.38
embC 4241086 c.1224G>C synonymous_variant 0.38
embC 4241089 c.1227C>G synonymous_variant 0.38
embC 4241101 c.1239G>C synonymous_variant 0.25
embC 4241109 p.Ala416Gly missense_variant 0.25
embA 4242643 c.-590C>T upstream_gene_variant 1.0
embA 4244651 c.1419C>T synonymous_variant 0.25
embA 4244666 c.1434G>C synonymous_variant 0.33
embA 4244669 c.1437G>C synonymous_variant 0.33
embA 4244675 c.1443A>G synonymous_variant 0.31
embA 4244681 c.1449A>C synonymous_variant 0.3
embA 4244684 c.1452C>T synonymous_variant 0.28
embA 4244694 p.Lys488Val missense_variant 0.31
embA 4244714 c.1482C>G synonymous_variant 0.35
embA 4244726 p.Asp498Glu missense_variant 0.26
embA 4244747 c.1515T>C synonymous_variant 0.2
embA 4244878 p.Ala549Val missense_variant 0.21
embA 4244885 c.1653A>G synonymous_variant 0.42
embA 4244895 p.Thr555Ser missense_variant 0.35
embA 4244904 p.Val558Ile missense_variant 0.38
embA 4244912 c.1680G>T synonymous_variant 0.37
embA 4244921 c.1689C>G synonymous_variant 0.37
embA 4244933 c.1701A>C synonymous_variant 0.41
embA 4244945 c.1713C>G synonymous_variant 0.47
embA 4244957 c.1725C>T synonymous_variant 0.47
embA 4244960 c.1728A>G synonymous_variant 0.37
embA 4245042 p.Thr604Ala missense_variant 0.2
embA 4245047 c.1815G>C synonymous_variant 0.21
embA 4245053 c.1821G>C synonymous_variant 0.21
embA 4245060 c.1828T>C synonymous_variant 0.22
embA 4245063 c.1831C>T synonymous_variant 0.22
embA 4245083 c.1851A>C synonymous_variant 0.23
embA 4245086 c.1854C>A synonymous_variant 0.23
embA 4245092 c.1860C>A synonymous_variant 0.22
embA 4245098 c.1866C>T synonymous_variant 0.21
embB 4247476 c.963C>G synonymous_variant 0.21
embB 4247996 p.Ala495Phe missense_variant 0.52
embB 4248008 p.Leu499Ile missense_variant 0.59
embB 4248011 p.Ser500Ala missense_variant 0.62
embB 4248035 p.Val508Ile missense_variant 0.71
embB 4248041 p.Ala510Thr missense_variant 0.7
embB 4248044 p.Lys511Ala missense_variant 0.69
embB 4248052 c.1539G>C synonymous_variant 0.7
embB 4248057 p.Ser515Asn missense_variant 0.71
embB 4248063 p.Ala517Glu missense_variant 0.74
embB 4248070 c.1557T>C synonymous_variant 0.69
embB 4248085 c.1572T>C synonymous_variant 0.67
embB 4248097 c.1584C>G synonymous_variant 0.59
embB 4248106 c.1593C>G synonymous_variant 0.5
embB 4248109 c.1596C>G synonymous_variant 0.45
embB 4248118 c.1605T>A synonymous_variant 0.32
embB 4248122 c.1609C>T synonymous_variant 0.32
embB 4248130 c.1617G>C synonymous_variant 0.29
embB 4248133 c.1620C>A synonymous_variant 0.27
embB 4248241 c.1728C>G synonymous_variant 0.53
embB 4248242 p.Val577Ile missense_variant 0.53
embB 4248248 p.Phe579Leu missense_variant 0.58
embB 4248256 c.1743C>G synonymous_variant 0.59
embB 4248257 p.Met582Val missense_variant 0.57
embB 4248277 c.1764G>C synonymous_variant 0.67
embB 4248280 c.1767C>G synonymous_variant 0.67
embB 4248283 c.1770C>G synonymous_variant 0.69
embB 4248295 c.1782C>T synonymous_variant 0.64
embB 4248319 c.1806A>G synonymous_variant 0.64
embB 4248322 c.1809G>C synonymous_variant 0.6
embB 4248325 c.1812G>C synonymous_variant 0.65
embB 4248334 c.1821C>G synonymous_variant 0.65
embB 4248341 p.Thr610Ala missense_variant 0.59
embB 4248346 c.1833G>C synonymous_variant 0.43
embB 4248350 c.1837T>C synonymous_variant 0.42
embB 4248358 c.1845C>G synonymous_variant 0.22
embB 4248363 p.Ser617* stop_gained 0.18
embB 4248388 c.1875G>A synonymous_variant 0.2
embB 4249469 p.Leu986Met missense_variant 0.45
embB 4249480 c.2967G>C synonymous_variant 0.5
embB 4249483 c.2970C>G synonymous_variant 0.5
embB 4249486 c.2973T>C synonymous_variant 0.5
embB 4249487 c.2974T>C synonymous_variant 0.5
embB 4249492 c.2979C>G synonymous_variant 0.49
embB 4249501 c.2988C>T synonymous_variant 0.46
embB 4249525 c.3012T>C synonymous_variant 0.47
embB 4249529 p.Ile1006Val missense_variant 0.49
embB 4249532 p.Ala1007Thr missense_variant 0.5
embB 4249537 c.3024A>G synonymous_variant 0.5
embB 4249540 c.3027C>T synonymous_variant 0.5
embB 4249558 c.3045A>T synonymous_variant 0.33
aftB 4268444 c.393C>G synonymous_variant 0.45
aftB 4268447 c.390G>C synonymous_variant 0.43
aftB 4268450 c.387A>G synonymous_variant 0.45
aftB 4268453 p.Val128Leu missense_variant 0.45
aftB 4268462 c.375T>C synonymous_variant 0.5
aftB 4268465 c.372A>G synonymous_variant 0.52
aftB 4268477 c.360C>A synonymous_variant 0.5
aftB 4268483 c.354T>G synonymous_variant 0.46
aftB 4268489 p.Ile116Leu missense_variant 0.44
aftB 4268495 c.342G>C synonymous_variant 0.46
aftB 4268498 c.339T>A synonymous_variant 0.46
aftB 4268513 c.324C>G synonymous_variant 0.48
ethA 4326271 c.1203T>C synonymous_variant 0.27
ethA 4326280 c.1194G>T synonymous_variant 0.64
ethA 4326304 c.1170C>G synonymous_variant 0.59
ethA 4326307 c.1167C>A synonymous_variant 0.59
ethA 4326310 c.1164T>C synonymous_variant 0.59
ethA 4326322 p.Val384Ile missense_variant 0.64
ethA 4326329 p.Tyr382Phe missense_variant 0.68
ethA 4326331 c.1143C>G synonymous_variant 0.68
ethA 4326343 p.Ile377Met missense_variant 0.68
ethA 4326347 p.Gly376His missense_variant 0.68
ethA 4326351 p.Ser375Thr missense_variant 0.66
ethA 4326352 c.1122T>G synonymous_variant 0.68
ethA 4326376 c.1098G>C synonymous_variant 0.24
whiB6 4338595 c.-75delG upstream_gene_variant 1.0
gid 4408156 p.Leu16Arg missense_variant 1.0