lineage | Count |
---|---|
lineage4.1 | 2 |
La1.7.1 | 1 |
lineage2.2.1 | 3 |
lineage4.4.1.2 | 2 |
49 | |
lineage4 | 83 |
lineage4.9 | 18 |
lineage4.3.4 | 2 |
lineage2.1 | 2 |
lineage4.3.4.2.1 | 3 |
lineage4.8 | 1 |
lineage4;lineage2 | 1 |
lineage4.1.1.2 | 1 |
lineage4.6.2.2 | 1 |
lineage4.9;lineage2.1 | 1 |
lineage2.2.1.1 | 1 |
lineage4.1.2 | 2 |
lineage4.3.2.1 | 1 |
lineage2.2 | 2 |
lineage4;lineage3.1 | 1 |
spoligotype | Count |
---|---|
None | 177 |
ID | Drug resistance | Lineage | Country iso2 | SRR12708416 | Sensitive | lineage4.1 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | ERR11068923 | HR-TB | lineage4.4.1.2 | None | ERR181744 | HR-TB | None | SRR3675455 | Sensitive | lineage4 | None | ERR176778 | HR-TB | None | SRR8692893 | Other | lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | ERR176779 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR4814639 | HR-TB | lineage4 | None | ERR702405 | Sensitive | lineage2.1 | None | SRR3675246 | Sensitive | lineage4 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | SRR3675279 | Other | None | ERR212138 | HR-TB | lineage4 | None | ERR176651 | HR-TB | None | ERR181887 | HR-TB | None | ERR212034 | HR-TB | None | ERR212123 | Other | None | ERR212125 | HR-TB | lineage4 | None | SRR3675387 | Sensitive | None | SRR5341422 | HR-TB | lineage2.1 | None | SRR5341373 | HR-TB | lineage4 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4819051 | Other | lineage4 | None | SRR5341453 | Sensitive | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR5341396 | Other | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341425 | Other | lineage4 | None | ERR1035138 | MDR-TB | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341313 | HR-TB | None | SRR5341315 | Sensitive | None | SRR6046210 | Other | lineage4 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341467 | Other | lineage4 | None | SRR5341469 | Other | lineage4 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | ERR4821655 | Sensitive | lineage4 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6044780 | Other | lineage4.9 | None | SRR6045892 | Sensitive | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045010 | Other | lineage4 | None | ERR502510 | Sensitive | lineage4 | None | SRR6511621 | HR-TB | None | SRR6046611 | HR-TB | lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR4831638 | Sensitive | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR502943 | HR-TB | None | SRR9970980 | Other | lineage4.1.2 | None | SRR8217918 | HR-TB | None | ERR323066 | Sensitive | lineage4 | None | ERR323045 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR323108 | HR-TB | lineage4 | None | ERR1063858 | HR-TB | None | ERR067699 | HR-TB | lineage4 | None | ERR1035122 | Sensitive | None | ERR1063857 | HR-TB | None | ERR323085 | Sensitive | lineage4 | None | ERR323107 | Other | lineage4 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1034634 | HR-TB | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063862 | HR-TB | None | ERR1063859 | HR-TB | None | ERR108471 | HR-TB | lineage4 | None | ERR1063883 | Sensitive | lineage4 | None | ERR1063896 | Sensitive | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR11465511 | Sensitive | lineage4.3.4.2.1 | None | ERR133825 | Sensitive | lineage4 | None | ERR3283014 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283031 | HR-TB | None | ERR3283028 | Other | None | ERR3283040 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369158 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR3797015 | HR-TB | None | ERR373946 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797048 | HR-TB | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797063 | HR-TB | None | ERR3797086 | Other | lineage4.9 | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR3797087 | Sensitive | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4024991 | Other | None | ERR400336 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4769521 | HR-TB | None | ERR4796254 | Sensitive | lineage4 | None | ERR473332 | Other | lineage4 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4797474 | Other | None | ERR4797264 | Sensitive | None | ERR4797184 | Sensitive | lineage4 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4798099 | Other | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR4812155 | Sensitive | None | ERR6358979 | Other | None | ERR6866022 | Other | None | ERR6866410 | Sensitive | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR6866639 | Other | None | ERR736875 | HR-TB | lineage4 | None | ERR736834 | Sensitive | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR736856 | HR-TB | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | SRR10808805 | Sensitive | None | SRR1158918 | Sensitive | lineage4 | None | SRR1183965 | Sensitive | lineage4.9 | None | ERR9119669 | HR-TB | None | SRR10808399 | Sensitive | lineage4 | None | SRR10809074 | Sensitive | lineage4 | None | SRR1173568 | Other | lineage4.9 | None | SRR1180996 | HR-TB | lineage4 | None |
---|