TB-Profiler result

Run: SRR1792478
Summary

Run ID: SRR1792478

Sample name:

Date: 03-04-2023 19:05:52

Number of reads: 1439644

Percentage reads mapped: 53.19

Strain: La1.7.1

Drug-resistance: HR-TB

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Drug resistance: This table reports drug-resistance associated mutations found in known resistance genes
Drug Resistance Supporting mutations
Lineage Table: The lineage is inferred by analysing lineage specific SNPs
Lineage Family Main Spoligotype RDs Frequency
La1 M.bovis None None 0.94
La1.7 M.bovis None None 0.98
La1.7.1 M.bovis None None 1.0
Drug resistance-Associated Mutations: This table reports mutations found in candidate resistance genes which have been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs
katG 2155693 p.Ser140Asn missense_variant 0.24 isoniazid
pncA 2289073 p.His57Asp missense_variant 1.0 pyrazinamide
Non-Associated Mutations: This table reports mutations found in candidate resistance genes which have not been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction
gyrB 5752 c.513G>A synonymous_variant 1.0
gyrB 6214 c.975G>A synonymous_variant 0.17
gyrB 6217 c.978G>A synonymous_variant 0.17
gyrB 6242 p.Arg335Asn missense_variant 0.17
gyrB 6250 c.1011A>C synonymous_variant 0.17
gyrB 6259 p.Asp340Glu missense_variant 0.18
gyrB 6266 p.Pro343Ala missense_variant 0.17
gyrB 6280 c.1041T>C synonymous_variant 0.17
gyrA 6406 c.-896C>T upstream_gene_variant 0.97
gyrB 6446 p.Ala403Ser missense_variant 0.96
gyrA 6649 c.-653T>G upstream_gene_variant 0.16
gyrA 6655 c.-647T>C upstream_gene_variant 0.18
gyrA 6700 c.-602T>C upstream_gene_variant 0.27
gyrA 6703 c.-599G>C upstream_gene_variant 0.27
gyrA 6709 c.-593A>G upstream_gene_variant 0.27
gyrA 6712 c.-590G>C upstream_gene_variant 0.3
gyrA 6730 c.-572A>G upstream_gene_variant 0.32
gyrA 6742 c.-560A>G upstream_gene_variant 0.33
gyrA 6745 c.-557T>G upstream_gene_variant 0.32
gyrA 6751 c.-551G>C upstream_gene_variant 0.33
gyrA 6760 c.-542G>C upstream_gene_variant 0.31
gyrA 6766 c.-536G>C upstream_gene_variant 0.29
gyrA 6775 c.-527G>C upstream_gene_variant 0.28
gyrA 6793 c.-509T>C upstream_gene_variant 0.27
gyrB 6794 p.Ile519Leu missense_variant 0.27
gyrB 6798 p.Gly520Ala missense_variant 0.27
gyrA 6802 c.-500G>A upstream_gene_variant 0.27
gyrA 6811 c.-491C>T upstream_gene_variant 0.32
gyrA 6820 c.-482C>A upstream_gene_variant 0.34
gyrA 6841 c.-461T>C upstream_gene_variant 0.31
gyrA 6844 c.-458T>C upstream_gene_variant 0.31
gyrA 6853 c.-449A>G upstream_gene_variant 0.26
gyrA 6856 c.-446T>C upstream_gene_variant 0.25
gyrA 6859 c.-443T>C upstream_gene_variant 0.25
gyrA 6862 c.-440C>G upstream_gene_variant 0.25
gyrA 6869 c.-433T>C upstream_gene_variant 0.24
gyrA 6872 c.-430T>C upstream_gene_variant 0.24
gyrA 6878 c.-424T>C upstream_gene_variant 0.24
gyrA 6881 c.-421T>C upstream_gene_variant 0.24
gyrB 6896 p.Arg553Lys missense_variant 0.23
gyrA 6904 c.-398C>G upstream_gene_variant 0.23
gyrB 6905 p.Ile556Val missense_variant 0.23
gyrA 7362 p.Glu21Gln missense_variant 1.0
gyrA 7451 c.150C>G synonymous_variant 0.18
gyrA 7457 c.156T>C synonymous_variant 0.16
gyrA 7585 p.Ser95Thr missense_variant 1.0
gyrA 7607 c.306C>G synonymous_variant 0.16
gyrA 7625 c.324G>A synonymous_variant 0.22
gyrA 7628 c.327G>T synonymous_variant 0.24
gyrA 7637 c.336C>G synonymous_variant 0.22
gyrA 7658 c.357A>G synonymous_variant 0.21
gyrA 7664 c.363T>C synonymous_variant 0.22
gyrA 7670 c.369A>G synonymous_variant 0.28
gyrA 7683 c.382_384delAGGinsCGC synonymous_variant 0.31
gyrA 7697 c.396C>G synonymous_variant 0.32
gyrA 7700 c.399G>T synonymous_variant 0.32
gyrA 7703 c.402G>C synonymous_variant 0.32
gyrA 7706 c.405C>G synonymous_variant 0.32
gyrA 7710 c.409T>C synonymous_variant 0.33
gyrA 7728 c.427_429delAGGinsCGT synonymous_variant 0.38
gyrA 7763 c.462T>G synonymous_variant 0.39
gyrA 7778 c.477G>C synonymous_variant 0.37
gyrA 7787 c.486G>A synonymous_variant 0.35
gyrA 7793 c.492G>C synonymous_variant 0.29
gyrA 7796 c.495G>A synonymous_variant 0.27
gyrA 7799 c.498A>G synonymous_variant 0.28
gyrA 7814 c.513C>G synonymous_variant 0.31
gyrA 7821 c.520C>T synonymous_variant 0.31
gyrA 7832 c.531G>C synonymous_variant 0.31
gyrA 7835 c.534A>C synonymous_variant 0.31
gyrA 7847 c.546G>C synonymous_variant 0.29
gyrA 7859 c.558A>G synonymous_variant 0.28
gyrA 7865 c.564T>C synonymous_variant 0.26
gyrA 7868 p.Ile189Met missense_variant 0.26
gyrA 7871 c.570G>C synonymous_variant 0.25
gyrA 7880 c.579C>T synonymous_variant 0.25
gyrA 7886 c.585T>G synonymous_variant 0.25
gyrA 8126 c.825G>C synonymous_variant 0.16
gyrA 8129 c.828T>C synonymous_variant 0.15
gyrA 8156 c.855T>C synonymous_variant 0.2
gyrA 8174 c.873C>G synonymous_variant 0.23
gyrA 8177 c.876A>C synonymous_variant 0.23
gyrA 8189 c.888G>C synonymous_variant 0.25
gyrA 8192 c.891C>G synonymous_variant 0.25
gyrA 8198 c.897T>C synonymous_variant 0.23
gyrA 8201 c.900C>G synonymous_variant 0.23
gyrA 8207 c.906T>C synonymous_variant 0.25
gyrA 8219 c.918T>C synonymous_variant 0.25
gyrA 8225 c.924T>C synonymous_variant 0.25
gyrA 8234 c.933T>G synonymous_variant 0.27
gyrA 8235 c.934_936delTTAinsCTG synonymous_variant 0.27
gyrA 8253 p.Ile318Leu missense_variant 0.3
gyrA 8264 c.963T>C synonymous_variant 0.32
gyrA 8283 p.Ile328Leu missense_variant 0.37
gyrA 8288 c.987T>C synonymous_variant 0.38
gyrA 8294 c.993T>C synonymous_variant 0.44
gyrA 8318 c.1017C>G synonymous_variant 0.46
gyrA 8321 c.1020C>T synonymous_variant 0.46
gyrA 8324 c.1023T>C synonymous_variant 0.47
gyrA 8330 c.1029C>G synonymous_variant 0.49
gyrA 8339 c.1038A>C synonymous_variant 0.5
gyrA 8340 p.Ala347Ser missense_variant 0.5
gyrA 8354 c.1053G>T synonymous_variant 0.52
gyrA 8357 c.1056G>C synonymous_variant 0.53
gyrA 8375 c.1074G>C synonymous_variant 0.52
gyrA 8390 c.1089C>G synonymous_variant 0.44
gyrA 8391 p.Tyr364His missense_variant 0.43
gyrA 8399 c.1098T>C synonymous_variant 0.45
gyrA 8400 p.Asp367Asn missense_variant 0.45
gyrA 8405 c.1104C>T synonymous_variant 0.43
gyrA 8408 c.1107A>G synonymous_variant 0.43
gyrA 8411 c.1110C>G synonymous_variant 0.44
gyrA 8420 c.1119T>C synonymous_variant 0.46
gyrA 8423 c.1122G>C synonymous_variant 0.47
gyrA 8453 c.1152A>C synonymous_variant 0.5
gyrA 8471 c.1170T>C synonymous_variant 0.41
gyrA 8480 c.1179C>T synonymous_variant 0.39
gyrA 8486 c.1185T>C synonymous_variant 0.4
gyrA 8489 c.1188A>G synonymous_variant 0.4
gyrA 8504 c.1203G>C synonymous_variant 0.35
gyrA 8516 c.1215T>C synonymous_variant 0.36
gyrA 8519 c.1218A>G synonymous_variant 0.35
gyrA 8526 c.1225C>A synonymous_variant 0.35
gyrA 8540 c.1239C>G synonymous_variant 0.34
gyrA 8546 c.1245T>C synonymous_variant 0.34
gyrA 8552 c.1251C>T synonymous_variant 0.33
gyrA 8556 p.Ala419Gln missense_variant 0.33
gyrA 8561 c.1260A>C synonymous_variant 0.34
gyrA 8562 c.1261C>T synonymous_variant 0.34
gyrA 8568 p.Glu423Gln missense_variant 0.34
gyrA 8573 c.1272G>A synonymous_variant 0.34
gyrA 8619 c.1318T>C synonymous_variant 0.21
gyrA 8624 c.1323G>C synonymous_variant 0.2
gyrA 8630 c.1329G>C synonymous_variant 0.18
gyrA 8633 c.1332C>G synonymous_variant 0.18
gyrA 8636 c.1335A>G synonymous_variant 0.18
gyrA 8645 c.1344C>G synonymous_variant 0.22
gyrA 8655 p.Ile452Val missense_variant 0.2
gyrA 8870 c.1569G>C synonymous_variant 0.21
gyrA 8873 c.1572A>T synonymous_variant 0.21
gyrA 8897 c.1596T>C synonymous_variant 0.33
gyrA 8900 c.1599G>C synonymous_variant 0.34
gyrA 8903 c.1602T>C synonymous_variant 0.33
gyrA 8906 c.1605C>A synonymous_variant 0.32
gyrA 8915 c.1614A>G synonymous_variant 0.21
gyrA 8924 c.1623C>T synonymous_variant 0.22
gyrA 8939 c.1638T>C synonymous_variant 0.24
gyrA 8946 c.1645_1647delTTGinsCTC synonymous_variant 0.24
gyrA 8967 p.Ala556Asn missense_variant 0.27
gyrA 8981 c.1680G>C synonymous_variant 0.27
gyrA 8987 c.1686C>G synonymous_variant 0.29
gyrA 8996 c.1695T>C synonymous_variant 0.29
gyrA 8998 p.Leu566Trp missense_variant 0.31
gyrA 9020 c.1719G>A synonymous_variant 0.28
gyrA 9023 c.1722A>C synonymous_variant 0.28
gyrA 9029 c.1728T>G synonymous_variant 0.26
gyrA 9032 c.1731T>C synonymous_variant 0.27
gyrA 9051 c.1750T>C synonymous_variant 0.27
gyrA 9062 c.1761C>G synonymous_variant 0.23
gyrA 9065 c.1764C>G synonymous_variant 0.23
gyrA 9071 c.1770G>C synonymous_variant 0.23
gyrA 9080 c.1779G>T synonymous_variant 0.21
gyrA 9089 c.1788G>C synonymous_variant 0.2
gyrA 9092 c.1791C>G synonymous_variant 0.19
gyrA 9099 c.1798_1800delTTAinsCTC synonymous_variant 0.18
gyrA 9104 c.1803C>G synonymous_variant 0.18
gyrA 9113 c.1812C>G synonymous_variant 0.19
gyrA 9119 c.1818A>G synonymous_variant 0.17
gyrA 9122 c.1821C>G synonymous_variant 0.16
gyrA 9143 c.1842T>C synonymous_variant 1.0
gyrA 9188 p.Asn629Lys missense_variant 0.17
gyrA 9197 c.1896G>C synonymous_variant 0.18
gyrA 9200 c.1899A>G synonymous_variant 0.18
gyrA 9206 c.1905C>G synonymous_variant 0.17
gyrA 9208 p.Lys636Arg missense_variant 0.17
gyrA 9217 p.Asp639Ala missense_variant 0.8
gyrA 9230 c.1929T>C synonymous_variant 0.22
gyrA 9242 c.1941A>C synonymous_variant 0.24
gyrA 9248 c.1947G>C synonymous_variant 0.25
gyrA 9260 c.1959G>C synonymous_variant 0.3
gyrA 9267 p.Asn656Gly missense_variant 0.3
gyrA 9275 c.1974G>A synonymous_variant 0.29
gyrA 9284 c.1983T>C synonymous_variant 0.29
gyrA 9296 c.1995T>C synonymous_variant 0.31
gyrA 9304 p.Gly668Asp missense_variant 1.0
gyrA 9323 c.2022C>G synonymous_variant 0.29
gyrA 9329 c.2028C>G synonymous_variant 0.27
gyrA 9332 p.Asn677Lys missense_variant 0.27
gyrA 9341 c.2040C>G synonymous_variant 0.27
gyrA 9345 c.2044_2046delAGGinsCGC synonymous_variant 0.29
gyrA 9351 p.Ser684Ala missense_variant 0.28
gyrA 9356 c.2055G>A synonymous_variant 0.29
gyrA 9369 c.2068C>T synonymous_variant 0.32
gyrA 9377 c.2076A>G synonymous_variant 0.32
gyrA 9383 c.2082T>C synonymous_variant 0.32
gyrA 9386 c.2085T>G synonymous_variant 0.34
gyrA 9395 c.2094G>C synonymous_variant 0.33
gyrA 9419 c.2118T>C synonymous_variant 0.27
gyrA 9421 p.Ile707Thr missense_variant 0.27
gyrA 9429 p.Arg710Ala missense_variant 0.27
gyrA 9449 c.2148C>G synonymous_variant 0.26
gyrA 9453 c.2153_2155delGTG disruptive_inframe_deletion 0.23
gyrA 9464 c.2163C>A synonymous_variant 0.23
gyrA 9466 p.Tyr722Phe missense_variant 0.23
gyrA 9476 c.2175G>C synonymous_variant 0.23
gyrA 9483 p.Ser728Ala missense_variant 0.22
gyrA 9488 c.2187G>T synonymous_variant 0.22
gyrA 9503 c.2202T>C synonymous_variant 0.23
gyrA 9515 p.Glu738Asp missense_variant 0.24
gyrA 9518 c.2217A>G synonymous_variant 0.24
gyrA 9527 c.2226A>G synonymous_variant 0.25
gyrA 9539 c.2238C>T synonymous_variant 0.22
gyrA 9542 c.2241T>C synonymous_variant 0.18
gyrA 9548 c.2247T>G synonymous_variant 0.21
fgd1 491742 c.960T>C synonymous_variant 1.0
ccsA 620238 c.348G>C synonymous_variant 0.2
ccsA 620247 p.Leu119Phe missense_variant 0.2
ccsA 620250 c.360C>G synonymous_variant 0.19
ccsA 620253 c.363G>T synonymous_variant 0.19
ccsA 620256 c.366C>G synonymous_variant 0.19
ccsA 620257 p.Ile123Val missense_variant 0.2
ccsA 620269 p.Val127Ile missense_variant 0.2
ccsA 620275 c.385C>T synonymous_variant 0.18
ccsA 620283 c.393T>C synonymous_variant 0.18
ccsA 620284 p.Ala132Pro missense_variant 0.18
ccsA 620288 p.Arg133Gln missense_variant 0.18
ccsA 620296 p.Pro136Ala missense_variant 0.19
ccsA 620307 c.417C>G synonymous_variant 0.19
ccsA 620311 p.Leu141Val missense_variant 0.18
ccsA 620319 c.429C>G synonymous_variant 0.16
ccsA 620326 c.436C>T synonymous_variant 0.16
ccsA 620343 c.453G>T synonymous_variant 0.15
ccsA 620349 c.459A>C synonymous_variant 0.16
ccsA 620352 c.462C>G synonymous_variant 0.16
ccsA 620362 p.Ala158Thr missense_variant 0.16
ccsA 620367 c.477T>C synonymous_variant 0.17
ccsA 620373 c.483C>G synonymous_variant 0.16
ccsA 620376 c.486G>C synonymous_variant 0.16
ccsA 620631 c.741T>C synonymous_variant 0.17
rpoB 760139 c.333A>C synonymous_variant 0.18
rpoB 760142 c.336C>G synonymous_variant 0.19
rpoB 760181 c.375T>C synonymous_variant 0.32
rpoB 760184 c.378A>G synonymous_variant 0.31
rpoB 760196 c.390C>G synonymous_variant 0.26
rpoB 760223 c.417T>C synonymous_variant 0.28
rpoB 760235 c.429T>C synonymous_variant 0.29
rpoB 760253 c.447T>C synonymous_variant 0.34
rpoB 760271 c.465C>G synonymous_variant 0.33
rpoB 760298 c.492G>C synonymous_variant 0.33
rpoB 760310 c.504G>C synonymous_variant 0.27
rpoB 760313 c.507G>C synonymous_variant 0.27
rpoB 760317 c.511_512delAGinsTC synonymous_variant 0.29
rpoB 760328 c.522G>C synonymous_variant 0.3
rpoB 760331 c.525G>T synonymous_variant 0.3
rpoB 760337 c.531C>G synonymous_variant 0.31
rpoB 760340 c.534G>C synonymous_variant 0.32
rpoB 760359 p.Ile185Arg missense_variant 0.34
rpoB 760368 p.Ser188Thr missense_variant 0.38
rpoB 760406 c.600G>C synonymous_variant 0.41
rpoB 760407 p.Ser201Gly missense_variant 0.41
rpoB 760418 c.612G>A synonymous_variant 0.42
rpoB 760430 c.624T>C synonymous_variant 0.45
rpoB 760457 c.651C>T synonymous_variant 0.46
rpoB 760475 c.669A>G synonymous_variant 0.44
rpoB 760478 c.672C>T synonymous_variant 0.44
rpoB 760481 c.675G>T synonymous_variant 0.43
rpoB 760484 c.678A>G synonymous_variant 0.42
rpoB 760493 c.687C>G synonymous_variant 0.42
rpoB 760521 p.Ser239Ala missense_variant 0.38
rpoB 760532 c.726T>C synonymous_variant 0.36
rpoB 760533 p.Val243Thr missense_variant 0.34
rpoB 760541 c.735G>C synonymous_variant 0.35
rpoB 760547 c.741G>C synonymous_variant 0.35
rpoB 760563 p.Arg253Met missense_variant 0.34
rpoB 760591 p.Val262Ala missense_variant 0.33
rpoB 760611 c.805_807delTTGinsCTC synonymous_variant 0.34
rpoB 760634 c.828T>G synonymous_variant 0.33
rpoB 760646 c.840C>G synonymous_variant 0.29
rpoB 760649 c.843G>C synonymous_variant 0.29
rpoB 760655 c.849A>G synonymous_variant 0.27
rpoB 760661 c.855A>C synonymous_variant 0.23
rpoB 760674 c.868T>C synonymous_variant 0.22
rpoB 760679 c.873A>G synonymous_variant 0.2
rpoB 760683 c.877T>C synonymous_variant 0.16
rpoB 760965 p.Met387Leu missense_variant 0.18
rpoB 760970 c.1164G>C synonymous_variant 0.18
rpoB 760973 c.1167G>T synonymous_variant 0.21
rpoB 760982 c.1176G>C synonymous_variant 0.23
rpoB 760985 c.1179G>C synonymous_variant 0.24
rpoB 760988 c.1182C>G synonymous_variant 0.24
rpoB 760991 c.1185G>C synonymous_variant 0.24
rpoB 760997 c.1191G>C synonymous_variant 0.25
rpoB 761003 c.1197C>G synonymous_variant 0.24
rpoB 761015 c.1209G>C synonymous_variant 0.25
rpoB 761027 c.1221A>G synonymous_variant 0.26
rpoB 761036 c.1230G>C synonymous_variant 0.29
rpoB 761037 c.1231T>C synonymous_variant 0.31
rpoB 761051 c.1245G>A synonymous_variant 0.34
rpoB 761054 c.1248G>C synonymous_variant 0.34
rpoB 761057 c.1251G>C synonymous_variant 0.34
rpoB 761060 c.1254C>G synonymous_variant 0.34
rpoB 761063 c.1257C>G synonymous_variant 0.35
rpoB 761097 c.1291_1293delAGCinsTCG synonymous_variant 0.39
rpoB 761102 c.1296A>G synonymous_variant 0.38
rpoB 761132 c.1326G>T synonymous_variant 0.38
rpoB 761133 c.1327T>C synonymous_variant 0.39
rpoB 761147 c.1341C>T synonymous_variant 0.4
rpoB 761150 c.1344A>T synonymous_variant 0.4
rpoB 761165 c.1359G>C synonymous_variant 0.4
rpoB 761180 c.1374A>C synonymous_variant 0.4
rpoB 761189 c.1383T>C synonymous_variant 0.38
rpoB 761195 c.1389G>C synonymous_variant 0.4
rpoB 761198 c.1392G>C synonymous_variant 0.39
rpoB 761217 p.Pro471Ser missense_variant 0.31
rpoB 761220 c.1414_1416delTCGinsAGC synonymous_variant 0.3
rpoB 761249 c.1443A>G synonymous_variant 0.34
rpoB 761255 c.1449T>C synonymous_variant 0.35
rpoB 761261 c.1455G>T synonymous_variant 0.34
rpoB 761264 c.1458C>G synonymous_variant 0.33
rpoB 761273 c.1467T>C synonymous_variant 0.32
rpoB 761285 c.1479G>A synonymous_variant 0.27
rpoB 761289 p.Ser495Ala missense_variant 0.25
rpoB 761292 p.Val496Thr missense_variant 0.25
rpoB 761318 c.1512G>C synonymous_variant 0.24
rpoB 761336 c.1530C>T synonymous_variant 0.26
rpoB 761346 p.Val514Asn missense_variant 0.19
rpoB 761349 p.Asp515Lys missense_variant 0.18
rpoB 761354 c.1548C>T synonymous_variant 0.19
rpoB 761357 c.1551G>C synonymous_variant 0.2
rpoB 761360 c.1554T>C synonymous_variant 0.21
rpoB 761373 p.Val523His missense_variant 0.22
rpoB 761399 c.1593C>T synonymous_variant 0.18
rpoB 761561 c.1755C>G synonymous_variant 0.18
rpoB 761564 c.1758G>C synonymous_variant 0.18
rpoB 761570 c.1764T>C synonymous_variant 0.18
rpoB 761573 c.1767C>G synonymous_variant 0.18
rpoB 761579 c.1773G>C synonymous_variant 0.18
rpoB 761606 c.1800C>G synonymous_variant 0.18
rpoB 761612 c.1806G>T synonymous_variant 0.18
rpoB 761615 c.1809A>C synonymous_variant 0.19
rpoB 761633 c.1827G>C synonymous_variant 0.19
rpoB 761636 c.1830G>T synonymous_variant 0.2
rpoB 761645 c.1839C>G synonymous_variant 0.19
rpoB 761648 c.1842T>C synonymous_variant 0.2
rpoB 761666 c.1860G>C synonymous_variant 0.18
rpoB 761669 c.1863C>T synonymous_variant 0.18
rpoB 761675 c.1869G>C synonymous_variant 0.18
rpoB 761682 c.1876C>T synonymous_variant 0.18
rpoB 761687 c.1881C>T synonymous_variant 0.19
rpoB 761690 c.1884G>C synonymous_variant 0.19
rpoB 761702 c.1896C>G synonymous_variant 0.16
rpoB 761891 c.2085G>C synonymous_variant 0.17
rpoB 761933 c.2127G>C synonymous_variant 0.19
rpoB 761948 c.2142G>C synonymous_variant 0.2
rpoB 761954 c.2148C>G synonymous_variant 0.21
rpoB 761984 c.2178G>A synonymous_variant 0.31
rpoB 761999 c.2193G>C synonymous_variant 0.3
rpoB 762014 c.2208C>G synonymous_variant 0.35
rpoB 762038 c.2232C>T synonymous_variant 0.36
rpoB 762053 c.2247T>C synonymous_variant 0.4
rpoB 762062 c.2256T>C synonymous_variant 0.41
rpoB 762065 c.2259T>C synonymous_variant 0.42
rpoB 762083 c.2277T>C synonymous_variant 0.43
rpoB 762086 c.2280G>C synonymous_variant 0.41
rpoB 762101 c.2295C>G synonymous_variant 0.44
rpoB 762114 p.Ile770Val missense_variant 0.43
rpoB 762122 c.2316C>T synonymous_variant 0.44
rpoB 762137 c.2331C>T synonymous_variant 0.44
rpoB 762140 c.2334G>C synonymous_variant 0.45
rpoB 762143 c.2337T>C synonymous_variant 0.45
rpoB 762149 c.2343G>C synonymous_variant 0.45
rpoB 762158 c.2352G>C synonymous_variant 0.46
rpoB 762167 c.2361T>C synonymous_variant 0.45
rpoB 762176 c.2370T>C synonymous_variant 0.44
rpoB 762185 c.2379G>C synonymous_variant 0.44
rpoB 762218 c.2412T>C synonymous_variant 0.44
rpoB 762233 c.2427G>C synonymous_variant 0.43
rpoB 762251 c.2445G>C synonymous_variant 0.4
rpoB 762254 c.2448T>C synonymous_variant 0.38
rpoB 762257 c.2451C>G synonymous_variant 0.37
rpoB 762275 c.2469C>G synonymous_variant 0.36
rpoB 762284 c.2478G>C synonymous_variant 0.36
rpoB 762293 c.2487T>G synonymous_variant 0.34
rpoB 762317 c.2511A>G synonymous_variant 0.37
rpoB 762329 c.2523G>C synonymous_variant 0.37
rpoB 762335 c.2529C>T synonymous_variant 0.36
rpoB 762338 c.2532T>C synonymous_variant 0.35
rpoB 762347 c.2541T>C synonymous_variant 0.33
rpoB 762350 c.2544C>G synonymous_variant 0.32
rpoB 762353 c.2547C>T synonymous_variant 0.35
rpoB 762362 p.Glu852Asp missense_variant 0.36
rpoB 762369 c.2563T>C synonymous_variant 0.34
rpoC 762395 c.-975G>C upstream_gene_variant 0.3
rpoC 762398 c.-972T>C upstream_gene_variant 0.29
rpoC 762401 c.-969G>C upstream_gene_variant 0.29
rpoC 762404 c.-966T>C upstream_gene_variant 0.29
rpoC 762416 c.-954A>G upstream_gene_variant 0.29
rpoC 762434 c.-936T>C upstream_gene_variant 0.27
rpoC 762443 c.-927G>C upstream_gene_variant 0.29
rpoC 762449 c.-921C>A upstream_gene_variant 0.32
rpoC 762452 c.-918G>C upstream_gene_variant 0.32
rpoC 762470 c.-900G>C upstream_gene_variant 0.31
rpoC 762491 c.-879T>C upstream_gene_variant 0.29
rpoB 762510 p.Ala902Pro missense_variant 0.26
rpoC 762521 c.-849C>G upstream_gene_variant 0.24
rpoC 762527 c.-843G>C upstream_gene_variant 0.21
rpoC 762533 c.-837T>C upstream_gene_variant 0.19
rpoC 762536 c.-834T>C upstream_gene_variant 0.2
rpoC 762537 c.-833_-831delTTGinsCTC upstream_gene_variant 0.2
rpoC 762551 c.-819C>T upstream_gene_variant 0.16
rpoC 762818 c.-552C>G upstream_gene_variant 0.21
rpoC 762827 c.-543G>C upstream_gene_variant 0.24
rpoC 762833 c.-537C>T upstream_gene_variant 0.27
rpoC 762839 c.-531G>A upstream_gene_variant 0.26
rpoC 762857 c.-513C>G upstream_gene_variant 0.38
rpoC 762863 c.-507T>C upstream_gene_variant 0.4
rpoB 762879 p.Met1025Leu missense_variant 0.45
rpoC 762908 c.-462G>A upstream_gene_variant 0.46
rpoC 762920 c.-450C>T upstream_gene_variant 0.45
rpoC 762929 c.-441G>T upstream_gene_variant 0.46
rpoC 762995 c.-375G>T upstream_gene_variant 0.52
rpoC 763028 c.-342T>C upstream_gene_variant 0.49
rpoC 763031 c.-339T>G upstream_gene_variant 1.0
rpoC 763034 c.-336C>G upstream_gene_variant 0.47
rpoC 763040 c.-330C>G upstream_gene_variant 0.46
rpoC 763070 c.-300T>C upstream_gene_variant 0.44
rpoC 763085 c.-285C>G upstream_gene_variant 0.4
rpoC 763103 c.-267G>C upstream_gene_variant 0.31
rpoC 763115 c.-255T>C upstream_gene_variant 0.31
rpoC 763127 c.-243G>C upstream_gene_variant 0.29
rpoC 763158 c.-212C>T upstream_gene_variant 0.27
rpoC 763166 c.-204A>G upstream_gene_variant 0.25
rpoC 763169 c.-201A>G upstream_gene_variant 0.23
rpoC 763179 c.-191C>T upstream_gene_variant 0.24
rpoC 763456 c.87A>G synonymous_variant 0.21
rpoC 763468 c.99G>C synonymous_variant 0.23
rpoC 763486 c.117T>G synonymous_variant 0.3
rpoC 763528 c.159G>A synonymous_variant 0.38
rpoC 763531 c.162G>T synonymous_variant 0.39
rpoC 763546 c.177A>G synonymous_variant 0.41
rpoC 763570 c.201G>C synonymous_variant 0.44
rpoC 763573 c.204G>C synonymous_variant 0.44
rpoC 763594 c.225C>T synonymous_variant 0.47
rpoC 763615 c.246G>C synonymous_variant 0.51
rpoC 763618 c.249C>T synonymous_variant 0.49
rpoC 763657 c.288G>A synonymous_variant 0.49
rpoC 763658 c.289_291delCTTinsTTG synonymous_variant 0.49
rpoC 763669 c.300C>G synonymous_variant 0.51
rpoC 763675 c.306C>A synonymous_variant 0.51
rpoC 763696 c.327T>C synonymous_variant 0.49
rpoC 763699 c.330G>T synonymous_variant 0.52
rpoC 763702 c.333C>G synonymous_variant 0.52
rpoC 763709 c.340C>T synonymous_variant 0.52
rpoC 763714 c.345G>C synonymous_variant 0.5
rpoC 763717 c.348T>C synonymous_variant 0.5
rpoC 763723 c.354G>C synonymous_variant 0.5
rpoC 763732 c.363C>G synonymous_variant 0.52
rpoC 763744 c.375G>C synonymous_variant 0.5
rpoC 763765 c.396T>G synonymous_variant 0.46
rpoC 763774 c.405G>C synonymous_variant 0.45
rpoC 763781 p.Ser138Ala missense_variant 0.5
rpoC 763792 p.Glu141Asp missense_variant 0.5
rpoC 763801 c.432C>G synonymous_variant 0.51
rpoC 763807 c.438T>C synonymous_variant 0.51
rpoC 763813 c.444C>G synonymous_variant 0.47
rpoC 763816 c.447C>G synonymous_variant 0.46
rpoC 763831 c.462A>G synonymous_variant 0.44
rpoC 763836 p.Ala156Val missense_variant 0.41
rpoC 763840 c.471G>C synonymous_variant 0.41
rpoC 763858 c.489A>G synonymous_variant 0.43
rpoC 763861 c.492C>T synonymous_variant 0.43
rpoC 763870 c.501C>T synonymous_variant 0.43
rpoC 763872 p.Gly168Ala missense_variant 0.43
rpoC 763876 p.Glu169Asp missense_variant 0.41
rpoC 763879 c.510A>C synonymous_variant 0.41
rpoC 763885 c.516C>G synonymous_variant 0.41
rpoC 763888 c.519G>C synonymous_variant 0.4
rpoC 763894 c.525A>G synonymous_variant 0.4
rpoC 763900 c.531G>C synonymous_variant 0.4
rpoC 763912 c.543G>C synonymous_variant 0.31
rpoC 763913 p.Ala182Lys missense_variant 0.31
rpoC 763921 c.552G>C synonymous_variant 0.31
rpoC 763926 p.Ala186Glu missense_variant 0.31
rpoC 763940 p.Ala191Ser missense_variant 0.31
rpoC 763945 c.576T>C synonymous_variant 0.34
rpoC 763947 p.Ala193Val missense_variant 0.35
rpoC 763960 c.591T>C synonymous_variant 0.38
rpoC 763966 c.597C>T synonymous_variant 0.34
rpoC 763987 c.618C>T synonymous_variant 0.38
rpoC 763991 p.Ile208Leu missense_variant 0.36
rpoC 763996 c.627T>C synonymous_variant 0.37
rpoC 764002 c.633C>G synonymous_variant 0.34
rpoC 764005 c.636G>C synonymous_variant 0.34
rpoC 764011 c.642T>C synonymous_variant 0.3
rpoC 764024 c.655_657delTTGinsCTC synonymous_variant 0.28
rpoC 764032 p.Asp221Glu missense_variant 0.3
rpoC 764040 p.Ser224Thr missense_variant 0.27
rpoC 764044 c.675T>C synonymous_variant 0.28
rpoC 764059 c.690G>T synonymous_variant 0.24
rpoC 764083 c.714A>G synonymous_variant 0.21
rpoC 764084 p.Asn239Val missense_variant 0.21
rpoC 764098 c.729A>G synonymous_variant 0.29
rpoC 764126 p.Thr253Gln missense_variant 0.29
rpoC 764131 c.762T>C synonymous_variant 0.3
rpoC 764153 p.Gln262Lys missense_variant 0.32
rpoC 764161 c.792G>C synonymous_variant 0.33
rpoC 764188 c.819A>G synonymous_variant 0.33
rpoC 764203 c.834G>C synonymous_variant 0.31
rpoC 764206 c.837T>C synonymous_variant 0.31
rpoC 764209 c.840C>T synonymous_variant 0.31
rpoC 764215 c.846A>T synonymous_variant 0.32
rpoC 764227 c.858G>A synonymous_variant 0.34
rpoC 764239 c.870T>G synonymous_variant 0.34
rpoC 764245 c.876C>T synonymous_variant 0.35
rpoC 764254 c.885G>C synonymous_variant 0.35
rpoC 764263 c.894G>C synonymous_variant 0.4
rpoC 764266 c.897T>C synonymous_variant 0.41
rpoC 764269 c.900G>T synonymous_variant 0.41
rpoC 764278 c.909A>G synonymous_variant 0.38
rpoC 764317 c.948C>G synonymous_variant 0.33
rpoC 764320 c.951C>G synonymous_variant 0.32
rpoC 764344 c.975C>G synonymous_variant 0.3
rpoC 764365 c.996C>T synonymous_variant 0.31
rpoC 764371 c.1002G>T synonymous_variant 0.31
rpoC 764377 c.1008C>G synonymous_variant 0.3
rpoC 764381 c.1012_1013delTCinsAG synonymous_variant 0.25
rpoC 764387 c.1018T>C synonymous_variant 0.28
rpoC 764392 c.1023C>T synonymous_variant 0.3
rpoC 764405 c.1036_1038delAGGinsCGC synonymous_variant 0.25
rpoC 764428 c.1059G>C synonymous_variant 0.31
rpoC 764431 c.1062G>C synonymous_variant 0.31
rpoC 764434 c.1065A>G synonymous_variant 0.31
rpoC 764446 c.1077T>C synonymous_variant 0.33
rpoC 764449 c.1080G>C synonymous_variant 0.33
rpoC 764452 c.1083T>C synonymous_variant 0.34
rpoC 764458 c.1089G>C synonymous_variant 0.36
rpoC 764461 c.1092A>G synonymous_variant 0.36
rpoC 764497 c.1128A>G synonymous_variant 0.37
rpoC 764500 c.1131C>G synonymous_variant 0.38
rpoC 764521 c.1152T>C synonymous_variant 0.36
rpoC 764527 c.1158C>T synonymous_variant 0.36
rpoC 764536 c.1167G>T synonymous_variant 0.35
rpoC 764539 c.1170C>G synonymous_variant 0.37
rpoC 764548 c.1179G>A synonymous_variant 0.4
rpoC 764560 c.1191T>C synonymous_variant 0.4
rpoC 764566 c.1197C>G synonymous_variant 0.4
rpoC 764575 c.1206T>G synonymous_variant 0.38
rpoC 764576 c.1207_1208delTCinsAG synonymous_variant 0.39
rpoC 764611 c.1242G>C synonymous_variant 0.47
rpoC 764632 c.1263T>C synonymous_variant 0.46
rpoC 764650 c.1281G>T synonymous_variant 0.42
rpoC 764677 c.1308C>G synonymous_variant 0.38
rpoC 764698 c.1329G>T synonymous_variant 0.37
rpoC 764701 c.1332C>G synonymous_variant 0.36
rpoC 764713 c.1344G>A synonymous_variant 0.35
rpoC 764716 c.1347G>C synonymous_variant 0.36
rpoC 764746 c.1377G>T synonymous_variant 0.3
rpoC 764749 c.1380G>C synonymous_variant 0.3
rpoC 764752 c.1383G>C synonymous_variant 0.3
rpoC 764758 c.1389C>G synonymous_variant 0.32
rpoC 764764 c.1395T>C synonymous_variant 0.33
rpoC 764797 c.1428G>C synonymous_variant 0.35
rpoC 764803 c.1434C>G synonymous_variant 0.34
rpoC 764812 c.1443C>G synonymous_variant 0.31
rpoC 764815 c.1446A>G synonymous_variant 0.3
rpoC 764824 c.1455T>C synonymous_variant 0.29
rpoC 764844 p.Ala492Gly missense_variant 0.25
rpoC 764858 c.1489T>C synonymous_variant 0.21
rpoC 764896 c.1527C>T synonymous_variant 0.17
rpoC 764911 c.1542A>G synonymous_variant 0.17
rpoC 764912 p.Met515Gln missense_variant 0.17
rpoC 764923 c.1554A>G synonymous_variant 0.22
rpoC 764935 c.1566T>C synonymous_variant 0.23
rpoC 764948 c.1579T>C synonymous_variant 0.24
rpoC 764953 c.1584G>C synonymous_variant 0.23
rpoC 764956 c.1587T>C synonymous_variant 0.23
rpoC 764968 c.1599T>C synonymous_variant 0.23
rpoC 764983 c.1614T>C synonymous_variant 0.24
rpoC 764995 c.1626C>A synonymous_variant 0.24
rpoC 765007 c.1638T>G synonymous_variant 0.28
rpoC 765008 c.1639T>C synonymous_variant 0.28
rpoC 765019 c.1650A>G synonymous_variant 0.29
rpoC 765034 c.1665T>A synonymous_variant 0.28
rpoC 765040 c.1671T>C synonymous_variant 0.29
rpoC 765041 c.1672T>C synonymous_variant 0.28
rpoC 765047 c.1678T>C synonymous_variant 0.29
rpoC 765052 c.1683C>T synonymous_variant 0.3
rpoC 765073 c.1704G>C synonymous_variant 0.3
rpoC 765076 c.1707A>G synonymous_variant 0.3
rpoC 765079 c.1710T>G synonymous_variant 0.29
rpoC 765082 c.1713G>C synonymous_variant 0.29
rpoC 765085 c.1716T>C synonymous_variant 0.29
rpoC 765089 c.1720T>C synonymous_variant 0.29
rpoC 765103 c.1734G>T synonymous_variant 0.26
rpoC 765122 c.1753C>T synonymous_variant 0.21
rpoC 765126 p.Tyr586Phe missense_variant 0.2
rpoC 765404 c.2035C>T synonymous_variant 0.16
rpoC 765419 p.Val684Ile missense_variant 0.19
rpoC 765425 p.Lys686Gln missense_variant 0.2
rpoC 765439 c.2070G>A synonymous_variant 0.21
rpoC 765451 c.2082C>G synonymous_variant 0.23
rpoC 765452 p.Ala695Ser missense_variant 0.23
rpoC 765466 c.2097C>T synonymous_variant 0.26
rpoC 765469 c.2100G>C synonymous_variant 0.27
rpoC 765478 c.2109T>C synonymous_variant 0.27
rpoC 765481 c.2112C>T synonymous_variant 0.28
rpoC 765496 c.2127C>T synonymous_variant 0.27
rpoC 765499 c.2130C>G synonymous_variant 0.27
rpoC 765548 c.2179_2181delAGCinsTCG synonymous_variant 0.26
rpoC 765553 c.2184C>T synonymous_variant 0.27
rpoC 765556 c.2187G>C synonymous_variant 0.26
rpoC 765559 c.2190G>C synonymous_variant 0.27
rpoC 765577 c.2208G>C synonymous_variant 0.29
rpoC 765578 p.Leu737Ile missense_variant 0.29
rpoC 765590 p.Arg741Asn missense_variant 0.28
rpoC 765596 p.Lys743Gln missense_variant 0.27
rpoC 765612 p.His748Arg missense_variant 0.17
rpoC 765644 p.Gln759Lys missense_variant 0.16
rpoC 765648 p.Phe760Tyr missense_variant 0.18
rpoC 765655 c.2286T>C synonymous_variant 0.21
rpoC 765658 c.2289C>T synonymous_variant 0.21
rpoC 765684 p.Glu772Gly missense_variant 0.23
rpoC 765687 p.Ala773Glu missense_variant 0.23
rpoC 765694 c.2325G>C synonymous_variant 0.23
rpoC 765695 p.Glu776Lys missense_variant 0.23
rpoC 765700 c.2331T>C synonymous_variant 0.23
rpoC 765704 p.Lys779Gln missense_variant 0.23
rpoC 765707 p.Glu780Gln missense_variant 0.23
rpoC 765712 c.2343C>G synonymous_variant 0.24
rpoC 765718 p.Asp783Glu missense_variant 0.24
rpoC 765727 c.2358T>C synonymous_variant 0.24
rpoC 765728 p.Gln787Glu missense_variant 0.24
rpoC 765733 c.2364G>T synonymous_variant 0.25
rpoC 765734 c.2365T>C synonymous_variant 0.25
rpoC 765751 c.2382C>G synonymous_variant 0.28
rpoC 765752 p.Asp795Gln missense_variant 0.28
rpoC 765772 c.2403C>G synonymous_variant 0.31
rpoC 765784 c.2415C>G synonymous_variant 0.32
rpoC 765790 c.2421C>G synonymous_variant 0.3
rpoC 765793 c.2424C>G synonymous_variant 0.3
rpoC 765796 c.2427C>T synonymous_variant 0.3
rpoC 765811 c.2442T>G synonymous_variant 0.3
rpoC 765814 c.2445A>C synonymous_variant 0.28
rpoC 765823 c.2454C>A synonymous_variant 0.3
rpoC 765826 c.2457T>C synonymous_variant 0.27
rpoC 765835 c.2466C>A synonymous_variant 0.3
rpoC 765875 p.Val836Ile missense_variant 0.34
rpoC 765886 c.2517C>G synonymous_variant 0.32
rpoC 765892 c.2523T>C synonymous_variant 0.29
rpoC 765904 c.2535C>G synonymous_variant 0.28
rpoC 765937 c.2568T>C synonymous_variant 0.23
rpoC 765946 c.2577C>T synonymous_variant 0.23
rpoC 765947 c.2578T>C synonymous_variant 0.23
rpoC 765961 c.2592G>T synonymous_variant 0.19
rpoC 765962 c.2593_2595delTTGinsCTT synonymous_variant 0.19
rpoC 765967 c.2598C>T synonymous_variant 0.19
rpoC 765973 c.2604C>T synonymous_variant 0.2
rpoC 765979 c.2610C>G synonymous_variant 0.2
rpoC 765982 c.2613C>T synonymous_variant 0.2
rpoC 765994 c.2625A>T synonymous_variant 0.2
rpoC 766003 c.2634G>C synonymous_variant 0.17
rpoC 766009 c.2640G>C synonymous_variant 0.17
rpoC 766010 c.2641_2642delTCinsAG synonymous_variant 0.17
rpoC 766021 c.2652G>C synonymous_variant 0.17
rpoC 766027 c.2658G>T synonymous_variant 0.17
rpoC 766035 p.His889Pro missense_variant 0.16
rpoC 766042 c.2673C>T synonymous_variant 0.15
rpoC 766043 p.Gln892Glu missense_variant 0.15
rpoC 766363 c.2994G>T synonymous_variant 0.17
rpoC 766369 c.3000C>G synonymous_variant 0.15
rpoC 766381 c.3012C>T synonymous_variant 0.18
rpoC 766384 c.3015A>G synonymous_variant 0.18
rpoC 766393 c.3024C>G synonymous_variant 0.22
rpoC 766423 c.3054T>C synonymous_variant 0.3
rpoC 766426 c.3057C>T synonymous_variant 0.3
rpoC 766429 c.3060C>G synonymous_variant 0.31
rpoC 766447 c.3078T>C synonymous_variant 0.32
rpoC 766459 c.3090G>C synonymous_variant 0.24
rpoC 766483 c.3114G>C synonymous_variant 0.22
rpoC 766486 c.3117A>G synonymous_variant 0.2
rpoC 766492 c.3123T>C synonymous_variant 0.2
rpoC 766493 p.Gly1042Asn missense_variant 0.2
rpoC 766510 c.3141C>G synonymous_variant 0.19
rpoC 766690 c.3321G>C synonymous_variant 0.19
rpoC 766714 c.3345G>C synonymous_variant 0.21
rpoC 766717 c.3348C>G synonymous_variant 0.23
rpoC 766726 c.3357T>C synonymous_variant 0.22
rpoC 766738 c.3369G>T synonymous_variant 0.19
rpoC 766741 c.3372G>C synonymous_variant 0.23
rpoC 766765 c.3396A>C synonymous_variant 0.26
rpoC 766771 c.3402G>C synonymous_variant 0.28
rpoC 766774 c.3405T>C synonymous_variant 0.29
rpoC 766775 p.Arg1136Lys missense_variant 0.29
rpoC 766801 c.3432C>T synonymous_variant 0.41
rpoC 766804 c.3435A>G synonymous_variant 0.41
rpoC 766807 c.3438T>C synonymous_variant 0.41
rpoC 766843 c.3474T>C synonymous_variant 0.46
rpoC 766846 c.3477C>G synonymous_variant 0.47
rpoC 766858 c.3489C>G synonymous_variant 0.47
rpoC 766861 c.3492G>C synonymous_variant 0.47
rpoC 766864 c.3495G>C synonymous_variant 0.48
rpoC 766867 c.3498C>G synonymous_variant 0.48
rpoC 766876 c.3507C>T synonymous_variant 0.48
rpoC 766883 p.Ser1172Ala missense_variant 0.48
rpoC 766894 c.3525T>C synonymous_variant 0.47
rpoC 766895 c.3526T>C synonymous_variant 0.47
rpoC 766900 c.3531T>C synonymous_variant 0.48
rpoC 766903 c.3534C>T synonymous_variant 0.48
rpoC 766911 p.Ile1181Thr missense_variant 0.48
rpoC 766915 p.Asp1182Glu missense_variant 0.48
rpoC 766920 p.Ala1184Gly missense_variant 0.49
rpoC 766931 p.Ala1188Thr missense_variant 0.46
rpoC 766942 c.3573C>T synonymous_variant 0.42
rpoC 766945 c.3576A>G synonymous_variant 0.43
rpoC 766951 c.3582G>C synonymous_variant 0.44
rpoC 766963 c.3594T>C synonymous_variant 0.46
rpoC 766978 c.3609C>T synonymous_variant 0.47
rpoC 766981 c.3612T>C synonymous_variant 0.48
rpoC 766996 c.3627C>T synonymous_variant 0.45
rpoC 767023 c.3654C>T synonymous_variant 0.36
rpoC 767098 c.3729T>C synonymous_variant 0.32
rpoC 767104 c.3735C>G synonymous_variant 0.31
rpoC 767105 p.Asn1246Gln missense_variant 0.31
rpoC 767110 c.3741T>C synonymous_variant 0.3
rpoC 767119 c.3750A>G synonymous_variant 0.31
rpoC 767158 c.3789T>C synonymous_variant 0.29
rpoC 767167 c.3798C>G synonymous_variant 0.27
rpoC 767180 p.Ala1271Gln missense_variant 0.21
rpoC 767191 c.3822C>G synonymous_variant 0.22
rpoC 767197 c.3828G>A synonymous_variant 0.23
rpoC 767203 c.3834C>G synonymous_variant 0.2
rpoC 767206 c.3837C>G synonymous_variant 0.2
rpoC 767209 c.3840T>C synonymous_variant 0.19
rpoC 767212 c.3843G>C synonymous_variant 0.19
rpoC 767221 c.3852C>G synonymous_variant 0.18
rpoC 767227 c.3858G>C synonymous_variant 0.18
rpoC 767230 c.3861G>T synonymous_variant 0.18
rpoC 767233 c.3864T>C synonymous_variant 0.18
mmpL5 775639 p.Ile948Val missense_variant 1.0
mmpL5 775865 c.2616T>C synonymous_variant 0.18
mmpL5 775881 p.Asn867Arg missense_variant 0.2
mmpL5 775883 p.Ile866Leu missense_variant 0.21
mmpL5 775909 p.Leu858Phe missense_variant 0.18
mmpL5 775910 c.2571G>C synonymous_variant 0.2
mmpL5 775913 p.Ala856Ser missense_variant 0.2
mmpL5 775916 c.2565T>G synonymous_variant 0.18
mmpL5 775922 c.2559G>T synonymous_variant 0.18
mmpL5 775925 c.2556G>C synonymous_variant 0.18
mmpL5 775937 c.2544G>C synonymous_variant 0.19
mmpL5 775946 c.2535C>G synonymous_variant 0.19
mmpL5 775951 c.2530C>T synonymous_variant 0.19
mmpL5 776100 p.Thr794Ile missense_variant 1.0
rpsL 781395 c.-165T>C upstream_gene_variant 1.0
rpsL 781586 c.27C>T synonymous_variant 0.17
rpsL 781595 c.36T>C synonymous_variant 0.19
rpsL 781598 c.39G>C synonymous_variant 0.18
rpsL 781608 p.Ser17Ala missense_variant 0.18
rpsL 781616 c.57C>G synonymous_variant 0.23
rpsL 781628 c.69T>C synonymous_variant 0.29
rpsL 781631 c.72G>C synonymous_variant 0.32
rpsL 781649 c.90T>G synonymous_variant 0.35
rpsL 781652 c.93T>C synonymous_variant 0.36
rpsL 781658 c.99A>G synonymous_variant 0.42
rpsL 781670 c.111G>C synonymous_variant 0.48
rpsL 781709 c.150G>C synonymous_variant 0.54
rpsL 781715 c.156T>G synonymous_variant 0.54
rpsL 781724 c.165G>C synonymous_variant 0.53
rpsL 781728 c.169T>C synonymous_variant 0.53
rpsL 781736 c.177T>C synonymous_variant 0.54
rpsL 781742 c.183C>T synonymous_variant 0.53
rpsL 781754 c.195G>T synonymous_variant 0.53
rpsL 781760 c.201T>C synonymous_variant 0.52
rpsL 781763 c.204C>G synonymous_variant 0.51
rpsL 781766 c.207C>T synonymous_variant 0.53
rpsL 781769 c.210G>A synonymous_variant 0.5
rpsL 781802 c.243G>C synonymous_variant 0.47
rpsL 781805 c.246G>C synonymous_variant 0.48
rpsL 781808 c.249C>T synonymous_variant 0.49
rpsL 781817 c.258G>T synonymous_variant 0.47
rpsL 781832 c.273T>C synonymous_variant 0.48
rpsL 781835 c.276T>C synonymous_variant 0.46
rpsL 781859 c.300T>G synonymous_variant 0.48
rpsL 781865 c.306G>C synonymous_variant 0.42
rpsL 781868 c.309T>C synonymous_variant 0.41
rpsL 781871 c.312G>C synonymous_variant 0.41
rpsL 781877 c.318T>C synonymous_variant 0.43
rpsL 781880 c.321C>G synonymous_variant 0.42
rpsL 781892 c.333A>G synonymous_variant 0.44
rpsL 781898 c.339A>G synonymous_variant 0.43
rpsL 781907 c.348T>C synonymous_variant 0.42
rpsL 781916 c.357T>G synonymous_variant 0.41
rpsL 781929 p.Gly124Ser missense_variant 0.37
rplC 800643 c.-166_-164delCGCinsAGG upstream_gene_variant 0.19
rplC 800648 c.-161A>C upstream_gene_variant 0.2
rplC 800693 c.-116A>C upstream_gene_variant 0.23
rplC 800703 c.-106T>C upstream_gene_variant 0.24
rplC 800715 c.-94A>C upstream_gene_variant 0.22
rplC 800720 c.-89T>C upstream_gene_variant 0.22
rplC 800723 c.-86C>G upstream_gene_variant 0.18
rplC 800744 c.-65G>A upstream_gene_variant 0.18
rplC 800759 c.-50C>T upstream_gene_variant 0.18
rplC 800762 c.-47T>G upstream_gene_variant 0.16
fbiC 1302899 c.-32A>G upstream_gene_variant 1.0
fbiC 1303531 p.Met201Leu missense_variant 0.17
fbiC 1303539 c.609G>C synonymous_variant 0.18
fbiC 1303545 c.615A>G synonymous_variant 0.18
fbiC 1303551 c.621G>C synonymous_variant 0.19
fbiC 1303578 c.648G>A synonymous_variant 0.19
fbiC 1303581 c.651G>C synonymous_variant 0.19
fbiC 1303590 c.660A>C synonymous_variant 0.19
fbiC 1303602 c.672A>G synonymous_variant 0.19
fbiC 1303608 c.678G>A synonymous_variant 0.19
fbiC 1303614 c.684C>G synonymous_variant 0.17
fbiC 1303617 c.687C>G synonymous_variant 0.17
fbiC 1304008 c.1078T>C synonymous_variant 0.23
fbiC 1304016 c.1086C>G synonymous_variant 0.23
fbiC 1304022 c.1092T>C synonymous_variant 0.21
fbiC 1304040 c.1110C>T synonymous_variant 0.2
fbiC 1304820 c.1890G>C synonymous_variant 0.18
fbiC 1304829 c.1899T>C synonymous_variant 0.18
fbiC 1304832 c.1902C>G synonymous_variant 0.18
fbiC 1304868 c.1938G>C synonymous_variant 0.18
fbiC 1304869 c.1939C>T synonymous_variant 0.18
fbiC 1304872 c.1942_1944delAGCinsTCG synonymous_variant 0.19
fbiC 1304877 c.1947T>C synonymous_variant 0.19
fbiC 1304880 c.1950C>G synonymous_variant 0.18
fbiC 1304887 c.1957C>T synonymous_variant 0.19
fbiC 1304893 p.Gly655Ser missense_variant 0.18
fbiC 1304901 c.1971C>G synonymous_variant 0.17
fbiC 1304904 c.1974G>A synonymous_variant 0.18
fbiC 1304910 c.1980G>C synonymous_variant 0.18
fbiC 1304913 c.1983G>C synonymous_variant 0.18
fbiC 1304916 c.1986T>C synonymous_variant 0.18
fbiC 1304928 c.1998T>A synonymous_variant 0.25
fbiC 1304931 c.2001C>T synonymous_variant 0.25
fbiC 1304934 c.2004C>G synonymous_variant 0.25
fbiC 1304946 c.2016G>C synonymous_variant 0.24
fbiC 1304955 c.2025G>A synonymous_variant 0.24
fbiC 1304958 c.2028T>C synonymous_variant 0.23
fbiC 1304967 c.2037G>T synonymous_variant 0.25
fbiC 1304970 c.2040G>C synonymous_variant 0.25
fbiC 1304988 c.2058G>C synonymous_variant 0.22
fbiC 1304994 c.2064A>G synonymous_variant 0.17
fbiC 1304995 p.Leu689Met missense_variant 0.16
rrs 1471659 n.-187C>T upstream_gene_variant 1.0
rrs 1471918 n.73A>T non_coding_transcript_exon_variant 0.21
rrs 1471923 n.78T>C non_coding_transcript_exon_variant 0.22
rrs 1471925 n.80T>C non_coding_transcript_exon_variant 0.22
rrs 1471926 n.81C>T non_coding_transcript_exon_variant 0.21
rrs 1471932 n.87A>G non_coding_transcript_exon_variant 0.21
rrs 1471934 n.89A>G non_coding_transcript_exon_variant 0.23
rrs 1471938 n.93T>A non_coding_transcript_exon_variant 0.24
rrs 1471986 n.141C>T non_coding_transcript_exon_variant 0.39
rrs 1472019 n.174G>A non_coding_transcript_exon_variant 0.41
rrs 1472043 n.198T>G non_coding_transcript_exon_variant 0.42
rrs 1472048 n.203T>G non_coding_transcript_exon_variant 0.44
rrs 1472053 n.211_212delGC non_coding_transcript_exon_variant 0.43
rrs 1472061 n.216A>T non_coding_transcript_exon_variant 0.42
rrs 1472075 n.230A>G non_coding_transcript_exon_variant 0.48
rrs 1472108 n.263C>T non_coding_transcript_exon_variant 0.57
rrs 1472286 n.441C>G non_coding_transcript_exon_variant 0.65
rrs 1472297 n.453_465delGTCCGGGTTCTCT non_coding_transcript_exon_variant 0.61
rrs 1472315 n.470T>G non_coding_transcript_exon_variant 0.58
rrs 1472325 n.480G>A non_coding_transcript_exon_variant 0.61
rrs 1472328 n.483G>C non_coding_transcript_exon_variant 0.61
rrs 1472438 n.593T>C non_coding_transcript_exon_variant 0.51
rrs 1472446 n.601T>A non_coding_transcript_exon_variant 0.49
rrs 1472452 n.607G>A non_coding_transcript_exon_variant 0.49
rrs 1472453 n.608G>A non_coding_transcript_exon_variant 0.48
rrs 1472456 n.611T>C non_coding_transcript_exon_variant 0.48
rrs 1472459 n.614C>T non_coding_transcript_exon_variant 0.49
rrs 1472464 n.619A>G non_coding_transcript_exon_variant 0.49
rrs 1472489 n.644A>G non_coding_transcript_exon_variant 0.56
rrs 1472846 n.1001C>A non_coding_transcript_exon_variant 0.58
rrs 1472847 n.1002G>C non_coding_transcript_exon_variant 0.58
rrs 1472849 n.1004C>G non_coding_transcript_exon_variant 0.56
rrs 1472850 n.1005T>C non_coding_transcript_exon_variant 0.56
rrs 1472857 n.1012A>G non_coding_transcript_exon_variant 0.57
rrs 1472858 n.1013G>T non_coding_transcript_exon_variant 0.58
rrs 1472860 n.1015C>G non_coding_transcript_exon_variant 0.58
rrs 1472861 n.1016G>T non_coding_transcript_exon_variant 0.58
rrs 1472973 n.1128A>T non_coding_transcript_exon_variant 0.66
rrs 1473104 n.1259C>T non_coding_transcript_exon_variant 0.61
rrs 1473110 n.1265T>G non_coding_transcript_exon_variant 0.56
rrs 1473111 n.1266A>G non_coding_transcript_exon_variant 0.56
rrs 1473276 n.1431A>G non_coding_transcript_exon_variant 0.42
rrs 1473301 n.1456T>C non_coding_transcript_exon_variant 0.38
rrl 1473668 n.11C>T non_coding_transcript_exon_variant 0.21
rrl 1473696 n.39T>C non_coding_transcript_exon_variant 0.28
rrl 1473697 n.40C>T non_coding_transcript_exon_variant 0.26
rrl 1473770 n.113T>G non_coding_transcript_exon_variant 0.5
rrl 1473788 n.131A>G non_coding_transcript_exon_variant 0.49
rrl 1473791 n.134A>G non_coding_transcript_exon_variant 0.49
rrl 1473806 n.149C>T non_coding_transcript_exon_variant 0.39
rrl 1473807 n.150T>C non_coding_transcript_exon_variant 0.39
rrl 1473811 n.154C>T non_coding_transcript_exon_variant 0.38
rrl 1473814 n.157A>T non_coding_transcript_exon_variant 0.38
rrl 1473815 n.158T>G non_coding_transcript_exon_variant 0.37
rrl 1473816 n.159C>G non_coding_transcript_exon_variant 0.37
rrl 1473828 n.171G>C non_coding_transcript_exon_variant 0.33
rrl 1473829 n.172G>C non_coding_transcript_exon_variant 0.33
rrl 1473830 n.173T>A non_coding_transcript_exon_variant 0.33
rrl 1473832 n.175C>T non_coding_transcript_exon_variant 0.33
rrl 1473839 n.182G>T non_coding_transcript_exon_variant 0.34
rrl 1473876 n.219G>A non_coding_transcript_exon_variant 0.27
rrl 1473898 n.241C>T non_coding_transcript_exon_variant 0.21
rrl 1473899 n.242A>G non_coding_transcript_exon_variant 0.23
rrl 1474140 n.483C>T non_coding_transcript_exon_variant 0.2
rrl 1474151 n.494C>T non_coding_transcript_exon_variant 0.27
rrl 1474174 n.517A>G non_coding_transcript_exon_variant 0.44
rrl 1474181 n.524C>T non_coding_transcript_exon_variant 0.44
rrl 1474185 n.528G>A non_coding_transcript_exon_variant 0.43
rrl 1474186 n.529A>G non_coding_transcript_exon_variant 0.44
rrl 1474275 n.618T>G non_coding_transcript_exon_variant 0.46
rrl 1474287 n.630_631insTC non_coding_transcript_exon_variant 0.44
rrl 1474308 n.651G>T non_coding_transcript_exon_variant 0.28
rrl 1474310 n.653T>A non_coding_transcript_exon_variant 0.37
rrl 1474362 n.705A>G non_coding_transcript_exon_variant 0.57
rrl 1474373 n.717dupT non_coding_transcript_exon_variant 0.48
rrl 1474376 n.719T>A non_coding_transcript_exon_variant 0.48
rrl 1474412 n.756_768delACCCACACGCGCA non_coding_transcript_exon_variant 0.35
rrl 1474428 n.771C>T non_coding_transcript_exon_variant 0.32
rrl 1474429 n.772G>C non_coding_transcript_exon_variant 0.31
rrl 1474431 n.774G>C non_coding_transcript_exon_variant 0.31
rrl 1474434 n.778_779insAGGGG non_coding_transcript_exon_variant 0.3
rrl 1474437 n.781_782delAA non_coding_transcript_exon_variant 0.33
rrl 1474446 n.789C>T non_coding_transcript_exon_variant 0.44
rrl 1474496 n.839C>A non_coding_transcript_exon_variant 0.58
rrl 1474497 n.840G>C non_coding_transcript_exon_variant 0.58
rrl 1474506 n.849C>G non_coding_transcript_exon_variant 0.55
rrl 1474507 n.850G>T non_coding_transcript_exon_variant 0.55
rrl 1474632 n.975G>T non_coding_transcript_exon_variant 0.68
rrl 1474709 n.1053_1056delTGGT non_coding_transcript_exon_variant 0.67
rrl 1474717 n.1060_1061insGTCTAAG non_coding_transcript_exon_variant 0.66
rrl 1474753 n.1096A>G non_coding_transcript_exon_variant 0.68
rrl 1474760 n.1103A>G non_coding_transcript_exon_variant 0.66
rrl 1474794 n.1137C>T non_coding_transcript_exon_variant 0.63
rrl 1474812 n.1155G>A non_coding_transcript_exon_variant 0.62
rrl 1474990 n.1333C>T non_coding_transcript_exon_variant 0.41
rrl 1474991 n.1334T>G non_coding_transcript_exon_variant 0.41
rrl 1474995 n.1338T>C non_coding_transcript_exon_variant 0.4
rrl 1474997 n.1340A>G non_coding_transcript_exon_variant 0.41
rrl 1474999 n.1342C>T non_coding_transcript_exon_variant 0.41
rrl 1475008 n.1351C>A non_coding_transcript_exon_variant 0.41
rrl 1475010 n.1353G>A non_coding_transcript_exon_variant 0.41
rrl 1475031 n.1374G>T non_coding_transcript_exon_variant 0.55
rrl 1475061 n.1404C>T non_coding_transcript_exon_variant 0.54
rrl 1475202 n.1545G>T non_coding_transcript_exon_variant 0.24
rrl 1475206 n.1549C>T non_coding_transcript_exon_variant 0.25
rrl 1475209 n.1552G>C non_coding_transcript_exon_variant 0.25
rrl 1475213 n.1556C>T non_coding_transcript_exon_variant 0.23
rrl 1475221 n.1564C>A non_coding_transcript_exon_variant 0.23
rrl 1475289 n.1632G>A non_coding_transcript_exon_variant 0.24
rrl 1475291 n.1634A>C non_coding_transcript_exon_variant 0.24
rrl 1475296 n.1639G>T non_coding_transcript_exon_variant 0.25
rrl 1475315 n.1658A>T non_coding_transcript_exon_variant 0.36
rrl 1475355 n.1698C>T non_coding_transcript_exon_variant 0.27
rrl 1475366 n.1709G>A non_coding_transcript_exon_variant 0.24
rrl 1475369 n.1712G>C non_coding_transcript_exon_variant 0.24
rrl 1475375 n.1718G>A non_coding_transcript_exon_variant 0.24
rrl 1475377 n.1721delA non_coding_transcript_exon_variant 0.27
rrl 1475380 n.1724delG non_coding_transcript_exon_variant 0.25
rrl 1475383 n.1726_1727insCC non_coding_transcript_exon_variant 0.26
rrl 1475387 n.1730C>T non_coding_transcript_exon_variant 0.26
rrl 1475395 n.1738T>G non_coding_transcript_exon_variant 0.26
rrl 1475396 n.1739C>G non_coding_transcript_exon_variant 0.26
rrl 1475397 n.1740G>T non_coding_transcript_exon_variant 0.26
rrl 1475398 n.1741C>G non_coding_transcript_exon_variant 0.26
rrl 1475403 n.1746T>A non_coding_transcript_exon_variant 0.26
rrl 1475404 n.1747A>T non_coding_transcript_exon_variant 0.25
rrl 1475407 n.1750C>T non_coding_transcript_exon_variant 0.24
rrl 1475409 n.1752T>C non_coding_transcript_exon_variant 0.25
rrl 1475419 n.1762C>T non_coding_transcript_exon_variant 0.25
rrl 1475429 n.1772G>A non_coding_transcript_exon_variant 0.24
rrl 1475430 n.1773T>G non_coding_transcript_exon_variant 0.26
rrl 1475452 n.1795C>A non_coding_transcript_exon_variant 0.31
rrl 1475479 n.1822C>T non_coding_transcript_exon_variant 0.28
rrl 1475480 n.1823A>C non_coding_transcript_exon_variant 0.28
rrl 1475526 n.1869C>A non_coding_transcript_exon_variant 0.32
rrl 1475532 n.1875A>G non_coding_transcript_exon_variant 0.3
rrl 1475544 n.1887A>T non_coding_transcript_exon_variant 0.22
rrl 1475545 n.1888T>G non_coding_transcript_exon_variant 0.23
rrl 1475602 n.1945G>C non_coding_transcript_exon_variant 0.22
rrl 1475603 n.1946G>A non_coding_transcript_exon_variant 0.21
rrl 1475604 n.1947A>C non_coding_transcript_exon_variant 0.21
rrl 1475606 n.1949T>C non_coding_transcript_exon_variant 0.21
rrl 1475608 n.1951T>C non_coding_transcript_exon_variant 0.22
rrl 1475612 n.1955G>C non_coding_transcript_exon_variant 0.23
rrl 1475615 n.1958C>G non_coding_transcript_exon_variant 0.23
rrl 1475616 n.1959A>G non_coding_transcript_exon_variant 0.23
rrl 1475619 n.1962C>T non_coding_transcript_exon_variant 0.23
rrl 1475621 n.1964T>C non_coding_transcript_exon_variant 0.23
rrl 1475629 n.1972G>C non_coding_transcript_exon_variant 0.23
rrl 1475635 n.1978G>C non_coding_transcript_exon_variant 0.23
rrl 1475637 n.1980T>G non_coding_transcript_exon_variant 0.24
rrl 1475638 n.1981C>T non_coding_transcript_exon_variant 0.24
rrl 1475639 n.1982C>G non_coding_transcript_exon_variant 0.24
rrl 1475643 n.1986C>G non_coding_transcript_exon_variant 0.23
rrl 1475647 n.1990G>C non_coding_transcript_exon_variant 0.23
rrl 1475659 n.2002G>A non_coding_transcript_exon_variant 0.29
rrl 1475884 n.2227A>G non_coding_transcript_exon_variant 0.54
rrl 1475988 n.2331A>G non_coding_transcript_exon_variant 0.5
rrl 1475991 n.2334T>C non_coding_transcript_exon_variant 0.49
rrl 1475995 n.2338G>A non_coding_transcript_exon_variant 0.5
rrl 1476030 n.2373A>G non_coding_transcript_exon_variant 0.53
rrl 1476032 n.2375C>G non_coding_transcript_exon_variant 0.53
rrl 1476033 n.2376T>C non_coding_transcript_exon_variant 0.53
rrl 1476034 n.2377C>A non_coding_transcript_exon_variant 0.53
rrl 1476044 n.2387T>C non_coding_transcript_exon_variant 0.5
rrl 1476045 n.2388G>T non_coding_transcript_exon_variant 0.49
rrl 1476047 n.2390G>T non_coding_transcript_exon_variant 0.5
rrl 1476049 n.2392C>T non_coding_transcript_exon_variant 0.51
rrl 1476077 n.2420T>C non_coding_transcript_exon_variant 0.55
rrl 1476088 n.2431A>C non_coding_transcript_exon_variant 0.56
rrl 1476103 n.2446C>G non_coding_transcript_exon_variant 0.52
rrl 1476105 n.2448G>C non_coding_transcript_exon_variant 0.51
rrl 1476106 n.2449A>T non_coding_transcript_exon_variant 0.51
rrl 1476110 n.2453G>C non_coding_transcript_exon_variant 0.5
rrl 1476115 n.2458T>C non_coding_transcript_exon_variant 0.47
rrl 1476119 n.2462G>A non_coding_transcript_exon_variant 0.51
rrl 1476131 n.2474C>T non_coding_transcript_exon_variant 0.53
rrl 1476160 n.2503T>A non_coding_transcript_exon_variant 0.67
rrl 1476214 n.2557G>T non_coding_transcript_exon_variant 0.63
rrl 1476215 n.2558C>T non_coding_transcript_exon_variant 0.63
rrl 1476224 n.2567A>G non_coding_transcript_exon_variant 0.65
rrl 1476251 n.2594T>G non_coding_transcript_exon_variant 0.7
rrl 1476252 n.2595T>G non_coding_transcript_exon_variant 0.7
rrl 1476256 n.2599A>T non_coding_transcript_exon_variant 0.7
rrl 1476281 n.2624T>C non_coding_transcript_exon_variant 0.73
rrl 1476529 n.2872A>G non_coding_transcript_exon_variant 0.59
rrl 1476583 n.2926G>C non_coding_transcript_exon_variant 0.61
rrl 1476584 n.2927C>T non_coding_transcript_exon_variant 0.61
rrl 1476597 n.2940G>A non_coding_transcript_exon_variant 0.58
rrl 1476616 n.2959A>C non_coding_transcript_exon_variant 0.56
rrl 1476628 n.2971T>A non_coding_transcript_exon_variant 0.56
rrl 1476664 n.3007T>C non_coding_transcript_exon_variant 0.46
rrl 1476665 n.3008T>C non_coding_transcript_exon_variant 0.46
rrl 1476674 n.3017T>C non_coding_transcript_exon_variant 0.45
rrl 1476679 n.3022T>C non_coding_transcript_exon_variant 0.42
rrl 1476690 n.3033C>T non_coding_transcript_exon_variant 0.32
rrl 1476691 n.3034T>C non_coding_transcript_exon_variant 0.32
rrl 1476692 n.3035T>A non_coding_transcript_exon_variant 0.32
rrl 1476693 n.3036G>A non_coding_transcript_exon_variant 0.32
rrl 1476716 n.3059A>C non_coding_transcript_exon_variant 0.26
rrl 1476723 n.3066T>A non_coding_transcript_exon_variant 0.27
rrl 1476731 n.3074G>A non_coding_transcript_exon_variant 0.2
rrl 1476732 n.3075T>C non_coding_transcript_exon_variant 0.21
inhA 1674489 c.288G>T synonymous_variant 0.17
inhA 1674491 p.Phe97Tyr missense_variant 0.19
inhA 1674507 c.306G>C synonymous_variant 0.23
inhA 1674513 c.312C>G synonymous_variant 0.26
inhA 1674537 c.336C>G synonymous_variant 0.24
inhA 1674543 c.342G>C synonymous_variant 0.23
inhA 1674546 c.345T>C synonymous_variant 0.22
inhA 1674549 c.348G>C synonymous_variant 0.22
inhA 1674550 p.Ser117Ala missense_variant 0.22
inhA 1674576 c.375T>C synonymous_variant 0.22
inhA 1674579 c.378G>C synonymous_variant 0.22
inhA 1674582 c.381T>C synonymous_variant 0.22
inhA 1674585 c.384T>G synonymous_variant 0.22
inhA 1674589 p.Met130Leu missense_variant 0.25
inhA 1674600 c.399G>C synonymous_variant 0.26
inhA 1674601 p.Leu134Thr missense_variant 0.26
inhA 1674619 p.Pro140Lys missense_variant 0.21
inhA 1674624 c.423A>C synonymous_variant 0.21
inhA 1674627 c.426T>G synonymous_variant 0.21
inhA 1674656 p.Ser152Thr missense_variant 0.2
inhA 1674658 c.457C>A synonymous_variant 0.17
inhA 1674669 c.468G>C synonymous_variant 0.16
rpsA 1833589 c.48A>C synonymous_variant 0.18
rpsA 1833595 c.54T>G synonymous_variant 0.18
rpsA 1833616 c.75A>C synonymous_variant 0.22
rpsA 1833619 c.78A>C synonymous_variant 0.22
rpsA 1833628 c.87G>C synonymous_variant 0.22
rpsA 1833634 c.93G>A synonymous_variant 0.22
rpsA 1833661 c.120A>G synonymous_variant 0.26
rpsA 1833664 c.123C>A synonymous_variant 0.26
rpsA 1833676 c.135A>G synonymous_variant 0.28
rpsA 1833679 c.138G>T synonymous_variant 0.29
rpsA 1833685 c.144G>T synonymous_variant 0.31
rpsA 1833694 c.153G>C synonymous_variant 0.36
rpsA 1833697 c.156C>G synonymous_variant 0.37
rpsA 1833709 c.168C>T synonymous_variant 0.36
rpsA 1833712 c.171C>T synonymous_variant 0.36
rpsA 1833715 c.174G>A synonymous_variant 0.38
rpsA 1833727 c.186G>C synonymous_variant 0.4
rpsA 1833733 c.192C>T synonymous_variant 0.4
rpsA 1833734 p.Ala65Ser missense_variant 0.4
rpsA 1833739 c.198C>A synonymous_variant 0.39
rpsA 1833742 c.201A>G synonymous_variant 0.39
rpsA 1833745 c.204G>C synonymous_variant 0.4
rpsA 1833778 c.237C>T synonymous_variant 0.41
rpsA 1833781 c.240T>G synonymous_variant 0.41
rpsA 1833790 c.249T>C synonymous_variant 0.41
rpsA 1833793 c.252C>T synonymous_variant 0.4
rpsA 1833811 c.270G>C synonymous_variant 0.44
rpsA 1833832 c.291G>A synonymous_variant 0.44
rpsA 1833838 c.297G>C synonymous_variant 0.45
rpsA 1833841 c.300C>G synonymous_variant 0.45
rpsA 1833847 c.306C>G synonymous_variant 0.46
rpsA 1833859 c.318C>T synonymous_variant 0.47
rpsA 1833862 c.321G>T synonymous_variant 0.47
rpsA 1833874 c.333T>C synonymous_variant 0.49
rpsA 1833886 c.345C>G synonymous_variant 0.49
rpsA 1833894 p.Ala118Glu missense_variant 0.48
rpsA 1833901 c.360G>A synonymous_variant 0.5
rpsA 1833928 c.387G>C synonymous_variant 0.48
rpsA 1833949 c.408T>C synonymous_variant 0.48
rpsA 1833970 c.429G>C synonymous_variant 0.47
rpsA 1833979 c.438T>G synonymous_variant 0.46
rpsA 1833991 c.450C>A synonymous_variant 0.43
rpsA 1834000 c.459G>C synonymous_variant 0.43
rpsA 1834009 c.468C>T synonymous_variant 0.43
rpsA 1834012 c.471G>T synonymous_variant 0.41
rpsA 1834015 c.474G>C synonymous_variant 0.42
rpsA 1834021 c.480C>T synonymous_variant 0.42
rpsA 1834030 c.489C>G synonymous_variant 0.43
rpsA 1834090 c.549G>C synonymous_variant 0.31
rpsA 1834096 c.555G>C synonymous_variant 0.29
rpsA 1834097 c.556_557delTCinsAG synonymous_variant 0.28
rpsA 1834105 c.564C>T synonymous_variant 0.29
rpsA 1834150 c.609G>C synonymous_variant 0.26
rpsA 1834153 c.612T>C synonymous_variant 0.25
rpsA 1834154 p.Asn205Gln missense_variant 0.25
rpsA 1834162 c.621A>G synonymous_variant 0.24
rpsA 1834165 c.624A>G synonymous_variant 0.24
rpsA 1834169 p.Thr210Ala missense_variant 0.25
rpsA 1834172 p.Ile211Val missense_variant 0.25
rpsA 1834177 c.636A>C synonymous_variant 0.25
rpsA 1834189 c.648G>T synonymous_variant 0.29
rpsA 1834192 c.651C>G synonymous_variant 0.29
rpsA 1834195 c.654G>C synonymous_variant 0.31
rpsA 1834234 c.693G>C synonymous_variant 0.34
rpsA 1834240 c.699T>C synonymous_variant 0.35
rpsA 1834249 c.708T>C synonymous_variant 0.33
rpsA 1834258 c.717G>A synonymous_variant 0.32
rpsA 1834261 c.720A>G synonymous_variant 0.33
rpsA 1834288 c.747C>G synonymous_variant 0.34
rpsA 1834294 c.753G>C synonymous_variant 0.34
rpsA 1834297 c.756C>A synonymous_variant 0.35
rpsA 1834303 c.762T>C synonymous_variant 0.36
rpsA 1834306 c.765T>C synonymous_variant 0.36
rpsA 1834315 c.774C>G synonymous_variant 0.37
rpsA 1834318 c.777C>T synonymous_variant 0.37
rpsA 1834336 c.795C>G synonymous_variant 0.4
rpsA 1834348 c.807T>C synonymous_variant 0.41
rpsA 1834366 c.825A>G synonymous_variant 0.45
rpsA 1834375 c.834G>A synonymous_variant 0.46
rpsA 1834378 c.837T>C synonymous_variant 0.47
rpsA 1834396 c.855G>C synonymous_variant 0.51
rpsA 1834411 c.870T>C synonymous_variant 0.49
rpsA 1834414 c.873C>T synonymous_variant 0.48
rpsA 1834423 c.882G>T synonymous_variant 0.46
rpsA 1834451 c.910T>C synonymous_variant 0.49
rpsA 1834456 c.915T>G synonymous_variant 0.49
rpsA 1834468 c.927A>G synonymous_variant 0.5
rpsA 1834483 c.942G>A synonymous_variant 0.5
rpsA 1834489 c.948T>C synonymous_variant 0.5
rpsA 1834501 c.960G>C synonymous_variant 0.52
rpsA 1834522 c.981C>T synonymous_variant 0.52
rpsA 1834528 c.987T>C synonymous_variant 0.52
rpsA 1834546 c.1005T>C synonymous_variant 0.46
rpsA 1834555 c.1014T>C synonymous_variant 0.47
rpsA 1834573 c.1032G>C synonymous_variant 0.51
rpsA 1834579 c.1038C>G synonymous_variant 0.48
rpsA 1834600 c.1059G>C synonymous_variant 0.53
rpsA 1834606 c.1065C>T synonymous_variant 0.51
rpsA 1834609 c.1068T>C synonymous_variant 0.51
rpsA 1834612 c.1071G>C synonymous_variant 0.51
rpsA 1834624 c.1083G>C synonymous_variant 0.47
rpsA 1834633 c.1092A>G synonymous_variant 0.46
rpsA 1834639 c.1098T>C synonymous_variant 0.45
rpsA 1834666 c.1125G>C synonymous_variant 0.46
rpsA 1834667 p.Ala376Ser missense_variant 0.44
rpsA 1834690 c.1149T>C synonymous_variant 0.49
rpsA 1834732 c.1191T>C synonymous_variant 0.35
rpsA 1834738 c.1197A>G synonymous_variant 0.35
rpsA 1834753 c.1212T>C synonymous_variant 0.32
rpsA 1834759 c.1218A>C synonymous_variant 0.31
rpsA 1834765 c.1224A>G synonymous_variant 0.29
rpsA 1834776 p.Ala412Asp missense_variant 0.28
rpsA 1834780 c.1239A>G synonymous_variant 0.26
rpsA 1834786 c.1245A>G synonymous_variant 0.26
rpsA 1834789 c.1248T>C synonymous_variant 0.25
rpsA 1834792 c.1251G>C synonymous_variant 0.26
rpsA 1834798 c.1257C>G synonymous_variant 0.26
rpsA 1834811 c.1270C>A synonymous_variant 0.22
rpsA 1834859 p.Ala440Thr missense_variant 0.98
tlyA 1917972 c.33A>G synonymous_variant 1.0
ndh 2103173 c.-132delG upstream_gene_variant 1.0
katG 2154724 p.Arg463Leu missense_variant 1.0
katG 2155503 c.609C>T synonymous_variant 1.0
katG 2155676 c.436C>A synonymous_variant 0.23
katG 2155691 c.421T>C synonymous_variant 0.24
katG 2155695 c.417C>G synonymous_variant 0.26
katG 2155716 c.396T>C synonymous_variant 0.26
katG 2155722 c.390G>T synonymous_variant 0.23
katG 2155728 c.384G>C synonymous_variant 0.22
katG 2155735 p.Met126Ala missense_variant 0.22
katG 2155740 p.Gly124Gln missense_variant 0.23
katG 2155748 p.Ala122Thr missense_variant 0.21
katG 2155752 c.360C>T synonymous_variant 0.21
katG 2155765 p.His116Phe missense_variant 0.19
katG 2155782 c.330C>A synonymous_variant 0.21
katG 2155785 c.327T>C synonymous_variant 0.21
katG 2155796 p.Ala106Thr missense_variant 0.16
katG 2156025 c.87C>A synonymous_variant 1.0
PPE35 2167926 p.Leu896Ser missense_variant 1.0
PPE35 2168011 p.Ser868Arg missense_variant 1.0
PPE35 2168319 p.Thr765Ile missense_variant 1.0
PPE35 2168814 c.1798dupA frameshift_variant 1.0
Rv1979c 2222308 p.Asp286Gly missense_variant 1.0
Rv1979c 2223293 c.-129A>G upstream_gene_variant 1.0
kasA 2517941 c.-174C>G upstream_gene_variant 0.2
kasA 2518132 c.18C>T synonymous_variant 1.0
kasA 2518162 c.48G>A synonymous_variant 0.15
kasA 2518174 c.60A>G synonymous_variant 0.28
kasA 2518183 c.69G>T synonymous_variant 0.29
kasA 2518187 p.Ile25Leu missense_variant 0.28
kasA 2518190 p.Ser26Ala missense_variant 0.27
kasA 2518219 c.105T>C synonymous_variant 0.23
kasA 2518220 c.106C>T synonymous_variant 0.23
kasA 2518228 c.114C>A synonymous_variant 0.18
kasA 2518606 c.492G>C synonymous_variant 0.17
ald 3086728 c.-92C>T upstream_gene_variant 1.0
ald 3086788 c.-32T>C upstream_gene_variant 1.0
ald 3087084 c.266delA frameshift_variant 1.0
Rv3083 3448783 p.Val94Ile missense_variant 1.0
fprA 3473996 c.-11_-10insA upstream_gene_variant 1.0
fprA 3474427 p.Val141Ile missense_variant 1.0
fprA 3474929 p.Gly308Asp missense_variant 0.97
fprA 3475159 p.Asn385Asp missense_variant 1.0
fbiB 3642478 p.Asp315Ala missense_variant 1.0
fbiB 3642749 c.1215T>G synonymous_variant 0.18
fbiB 3642752 c.1218C>T synonymous_variant 0.18
fbiB 3642758 c.1224C>G synonymous_variant 0.18
fbiB 3642761 c.1227C>G synonymous_variant 0.18
fbiB 3642767 c.1233G>A synonymous_variant 0.17
alr 3840214 p.Arg403Cys missense_variant 1.0
rpoA 3877587 c.921A>G synonymous_variant 0.15
rpoA 3877638 c.870T>C synonymous_variant 0.29
rpoA 3877656 c.852T>G synonymous_variant 0.29
rpoA 3877662 c.846C>T synonymous_variant 0.29
rpoA 3877668 c.840A>G synonymous_variant 0.28
rpoA 3877671 c.837C>G synonymous_variant 0.28
rpoA 3877677 c.831G>C synonymous_variant 0.3
rpoA 3877683 c.825G>C synonymous_variant 0.31
rpoA 3877686 c.822A>G synonymous_variant 0.31
rpoA 3877695 c.813C>G synonymous_variant 0.36
rpoA 3877701 c.807G>T synonymous_variant 0.4
rpoA 3877704 c.804G>T synonymous_variant 0.39
rpoA 3877728 c.780C>G synonymous_variant 0.38
rpoA 3877740 c.768G>C synonymous_variant 0.38
rpoA 3877743 c.765T>C synonymous_variant 0.38
rpoA 3877746 c.762G>T synonymous_variant 0.38
rpoA 3877749 c.759C>T synonymous_variant 0.38
rpoA 3877764 c.744C>A synonymous_variant 0.44
rpoA 3877770 c.738A>G synonymous_variant 0.43
rpoA 3877776 c.732T>C synonymous_variant 0.44
rpoA 3877782 c.726T>C synonymous_variant 0.45
rpoA 3877803 c.705G>C synonymous_variant 0.48
rpoA 3877818 c.690A>G synonymous_variant 0.47
rpoA 3877848 c.660C>T synonymous_variant 0.48
rpoA 3877875 c.633T>G synonymous_variant 0.42
rpoA 3877878 c.630G>T synonymous_variant 0.39
rpoA 3877881 c.627G>A synonymous_variant 0.38
rpoA 3877893 c.615C>T synonymous_variant 0.39
rpoA 3877898 p.Pro204Ala missense_variant 0.38
rpoA 3877899 p.Ser203Thr missense_variant 0.38
rpoA 3877905 c.603A>C synonymous_variant 0.38
rpoA 3877908 p.Asn200Ser missense_variant 0.38
rpoA 3877923 c.585C>T synonymous_variant 0.42
rpoA 3877962 c.546G>C synonymous_variant 0.46
rpoA 3877971 p.Asp179Glu missense_variant 0.48
rpoA 3877986 c.522G>C synonymous_variant 0.46
rpoA 3877989 c.519A>G synonymous_variant 0.49
rpoA 3878001 c.507A>G synonymous_variant 0.51
rpoA 3878019 c.489A>G synonymous_variant 0.45
rpoA 3878022 c.486T>C synonymous_variant 0.45
rpoA 3878028 c.480G>C synonymous_variant 0.44
rpoA 3878031 c.477T>C synonymous_variant 0.45
rpoA 3878046 c.462T>G synonymous_variant 0.42
rpoA 3878050 p.Arg153Lys missense_variant 0.41
rpoA 3878055 c.453A>G synonymous_variant 0.42
rpoA 3878061 c.447G>C synonymous_variant 0.38
rpoA 3878064 c.444G>C synonymous_variant 0.38
rpoA 3878070 c.438T>C synonymous_variant 0.39
rpoA 3878103 c.405A>G synonymous_variant 0.39
rpoA 3878118 c.390T>C synonymous_variant 0.41
rpoA 3878127 c.381G>C synonymous_variant 0.39
rpoA 3878142 p.Gly122Glu missense_variant 0.41
rpoA 3878157 c.351C>G synonymous_variant 0.46
rpoA 3878160 c.348C>G synonymous_variant 0.46
rpoA 3878163 c.345C>T synonymous_variant 0.46
rpoA 3878169 c.339G>T synonymous_variant 0.49
rpoA 3878187 c.321C>G synonymous_variant 0.49
rpoA 3878193 c.315T>C synonymous_variant 0.47
rpoA 3878197 p.Glu104Ala missense_variant 0.46
rpoA 3878202 c.306G>T synonymous_variant 0.42
rpoA 3878205 c.303T>G synonymous_variant 0.43
rpoA 3878214 c.294C>T synonymous_variant 0.47
rpoA 3878217 c.291A>G synonymous_variant 0.47
rpoA 3878256 c.252G>C synonymous_variant 0.47
rpoA 3878264 p.Ser82Gly missense_variant 0.47
rpoA 3878271 c.237T>C synonymous_variant 0.46
rpoA 3878283 p.Glu75Asp missense_variant 0.44
rpoA 3878292 c.216T>C synonymous_variant 0.42
rpoA 3878298 c.210A>G synonymous_variant 0.39
rpoA 3878301 c.207C>G synonymous_variant 0.42
rpoA 3878304 c.204G>T synonymous_variant 0.43
rpoA 3878307 c.201C>T synonymous_variant 0.43
rpoA 3878322 c.186A>G synonymous_variant 0.4
rpoA 3878331 c.177A>G synonymous_variant 0.38
rpoA 3878337 c.171T>C synonymous_variant 0.37
rpoA 3878346 c.162T>C synonymous_variant 0.36
rpoA 3878349 c.159C>T synonymous_variant 0.36
rpoA 3878358 c.150C>G synonymous_variant 0.34
rpoA 3878361 c.147G>A synonymous_variant 0.35
rpoA 3878364 c.144A>C synonymous_variant 0.36
rpoA 3878385 c.123C>G synonymous_variant 0.34
rpoA 3878391 c.117T>G synonymous_variant 0.35
rpoA 3878394 c.114G>T synonymous_variant 0.33
rpoA 3878406 c.102G>C synonymous_variant 0.33
rpoA 3878415 c.93C>G synonymous_variant 0.32
rpoA 3878424 c.84G>C synonymous_variant 0.32
rpoA 3878432 c.76C>T synonymous_variant 0.31
rpoA 3878436 c.72A>G synonymous_variant 0.3
rpoA 3878442 c.66G>C synonymous_variant 0.3
rpoA 3878451 c.57C>T synonymous_variant 0.24
rpoA 3878454 c.54A>C synonymous_variant 0.22
rpoA 3878460 p.Asp16Glu missense_variant 0.23
rpoA 3878465 p.Thr15Ala missense_variant 0.24
rpoA 3878469 c.39C>T synonymous_variant 0.21
rpoA 3878472 p.Asp12Glu missense_variant 0.21
rpoA 3878475 c.33G>A synonymous_variant 0.2
rpoA 3878630 c.-124delC upstream_gene_variant 1.0
ddn 3986646 c.-198_-196delCTCinsTTG upstream_gene_variant 0.19
ddn 3986651 c.-193G>A upstream_gene_variant 0.2
ddn 3986661 c.-183C>A upstream_gene_variant 0.15
clpC1 4038314 c.2391T>C synonymous_variant 0.18
clpC1 4038320 c.2385G>C synonymous_variant 0.19
clpC1 4038347 c.2358G>C synonymous_variant 0.18
clpC1 4038350 c.2355C>G synonymous_variant 0.16
clpC1 4038356 c.2349T>C synonymous_variant 0.17
clpC1 4038359 c.2346A>G synonymous_variant 0.17
clpC1 4038368 c.2337T>C synonymous_variant 0.18
clpC1 4038386 c.2317_2319delTTGinsCTA synonymous_variant 0.18
clpC1 4038392 c.2313C>T synonymous_variant 0.19
clpC1 4038395 c.2310C>A synonymous_variant 0.18
clpC1 4038398 c.2307G>T synonymous_variant 0.18
clpC1 4038403 c.2302T>C synonymous_variant 0.78
clpC1 4038407 c.2298G>C synonymous_variant 0.24
clpC1 4038410 c.2295C>T synonymous_variant 0.25
clpC1 4038419 c.2286T>C synonymous_variant 0.27
clpC1 4038434 c.2271G>A synonymous_variant 0.3
clpC1 4038444 p.Ala754Lys missense_variant 0.28
clpC1 4038446 c.2259T>C synonymous_variant 0.28
clpC1 4038456 p.Val750Glu missense_variant 0.28
clpC1 4038460 p.Leu749Met missense_variant 0.29
clpC1 4038474 p.Ser744Ala missense_variant 0.27
clpC1 4038499 p.Ser736Gly missense_variant 0.32
clpC1 4038530 p.Glu725Asp missense_variant 0.33
clpC1 4038536 c.2169C>T synonymous_variant 0.34
clpC1 4038587 c.2118C>G synonymous_variant 0.36
clpC1 4038593 c.2112C>T synonymous_variant 0.36
clpC1 4038602 c.2103G>C synonymous_variant 0.38
clpC1 4038623 c.2082A>G synonymous_variant 0.34
clpC1 4038640 p.Asp689Asn missense_variant 0.33
clpC1 4038647 c.2058T>G synonymous_variant 0.33
clpC1 4038658 p.Lys683Gln missense_variant 0.28
clpC1 4038661 p.Ser682Thr missense_variant 0.28
clpC1 4038662 c.2043T>C synonymous_variant 0.28
clpC1 4038665 c.2040C>G synonymous_variant 0.28
clpC1 4038668 c.2037G>C synonymous_variant 0.28
clpC1 4038671 c.2034T>C synonymous_variant 0.27
clpC1 4038677 p.Pro676Ala missense_variant 0.28
clpC1 4038683 c.2022T>C synonymous_variant 0.28
clpC1 4038704 c.2001T>C synonymous_variant 0.32
clpC1 4038713 c.1992T>C synonymous_variant 0.33
clpC1 4038740 c.1965G>C synonymous_variant 0.32
clpC1 4038755 c.1950G>C synonymous_variant 0.32
clpC1 4038767 c.1938G>C synonymous_variant 0.31
clpC1 4038773 c.1932T>C synonymous_variant 0.31
clpC1 4038782 c.1923G>C synonymous_variant 0.31
clpC1 4038790 c.1915C>T synonymous_variant 0.31
clpC1 4038812 c.1893T>C synonymous_variant 0.32
clpC1 4038815 c.1890G>C synonymous_variant 0.31
clpC1 4038839 c.1866G>C synonymous_variant 0.32
clpC1 4038842 c.1863G>C synonymous_variant 0.33
clpC1 4038845 c.1858_1860delTCGinsAGC synonymous_variant 0.33
clpC1 4038878 c.1827A>G synonymous_variant 0.45
clpC1 4038905 c.1800A>C synonymous_variant 0.41
clpC1 4038908 c.1797C>G synonymous_variant 0.41
clpC1 4038911 c.1794G>T synonymous_variant 0.4
clpC1 4038914 c.1791G>C synonymous_variant 0.41
clpC1 4038917 c.1788C>T synonymous_variant 0.43
clpC1 4038923 c.1782A>G synonymous_variant 0.43
clpC1 4038932 c.1773G>C synonymous_variant 0.44
clpC1 4038941 c.1764G>C synonymous_variant 0.45
clpC1 4038953 c.1752A>G synonymous_variant 0.42
clpC1 4038956 c.1749T>C synonymous_variant 0.41
clpC1 4038965 c.1740T>C synonymous_variant 0.38
clpC1 4038971 c.1734T>C synonymous_variant 0.35
clpC1 4038974 c.1731T>C synonymous_variant 0.35
clpC1 4038989 c.1716T>C synonymous_variant 0.41
clpC1 4038997 c.1708T>C synonymous_variant 0.43
clpC1 4039022 c.1683A>G synonymous_variant 0.44
clpC1 4039034 c.1671C>G synonymous_variant 0.46
clpC1 4039037 c.1668T>C synonymous_variant 0.45
clpC1 4039064 c.1641C>T synonymous_variant 0.47
clpC1 4039067 c.1638G>C synonymous_variant 0.46
clpC1 4039073 c.1632C>T synonymous_variant 0.46
clpC1 4039085 c.1620A>G synonymous_variant 0.46
clpC1 4039091 c.1614G>C synonymous_variant 0.43
clpC1 4039094 c.1611C>A synonymous_variant 0.4
clpC1 4039097 c.1608G>C synonymous_variant 0.4
clpC1 4039103 c.1602T>C synonymous_variant 0.41
clpC1 4039121 c.1584T>G synonymous_variant 0.37
clpC1 4039124 c.1581C>G synonymous_variant 0.37
clpC1 4039133 c.1572C>G synonymous_variant 0.4
clpC1 4039142 c.1563A>G synonymous_variant 0.42
clpC1 4039145 c.1560G>C synonymous_variant 0.41
clpC1 4039163 p.Leu514Ile missense_variant 0.38
clpC1 4039169 p.Glu512Asp missense_variant 0.37
clpC1 4039172 c.1533A>G synonymous_variant 0.35
clpC1 4039178 c.1527G>C synonymous_variant 0.36
clpC1 4039183 c.1522T>C synonymous_variant 0.35
clpC1 4039190 c.1515C>T synonymous_variant 0.35
clpC1 4039193 c.1512C>G synonymous_variant 0.36
clpC1 4039199 p.Ala502Glu missense_variant 0.39
clpC1 4039208 c.1497C>G synonymous_variant 0.43
clpC1 4039223 c.1482C>T synonymous_variant 0.42
clpC1 4039226 c.1479T>C synonymous_variant 0.42
clpC1 4039274 c.1431G>C synonymous_variant 0.45
clpC1 4039286 c.1419T>C synonymous_variant 0.43
clpC1 4039292 c.1413C>T synonymous_variant 0.43
clpC1 4039295 c.1410A>T synonymous_variant 0.43
clpC1 4039298 c.1407T>C synonymous_variant 0.43
clpC1 4039313 c.1392C>T synonymous_variant 0.43
clpC1 4039319 p.Ala462Thr missense_variant 0.42
clpC1 4039322 c.1383T>C synonymous_variant 0.42
clpC1 4039338 p.Thr456Gln missense_variant 0.4
clpC1 4039346 c.1359G>C synonymous_variant 0.41
clpC1 4039382 c.1323C>G synonymous_variant 0.42
clpC1 4039391 c.1314T>G synonymous_variant 0.44
clpC1 4039394 c.1311G>C synonymous_variant 0.44
clpC1 4039397 c.1308A>G synonymous_variant 0.45
clpC1 4039408 c.1297C>A synonymous_variant 0.44
clpC1 4039409 c.1296T>C synonymous_variant 0.44
clpC1 4039412 c.1293T>G synonymous_variant 0.44
clpC1 4039415 p.Glu430Asp missense_variant 0.43
clpC1 4039430 c.1275T>C synonymous_variant 0.47
clpC1 4039442 c.1263A>G synonymous_variant 0.47
clpC1 4039451 c.1254G>A synonymous_variant 0.48
clpC1 4039454 c.1251A>T synonymous_variant 0.48
clpC1 4039463 c.1242C>G synonymous_variant 0.49
clpC1 4039466 c.1239T>C synonymous_variant 0.49
clpC1 4039469 c.1236T>C synonymous_variant 0.51
clpC1 4039472 c.1233G>T synonymous_variant 0.5
clpC1 4039480 c.1225C>A synonymous_variant 0.47
clpC1 4039481 c.1224T>C synonymous_variant 0.49
clpC1 4039484 c.1221T>C synonymous_variant 0.48
clpC1 4039541 c.1164C>G synonymous_variant 0.43
clpC1 4039553 c.1152C>G synonymous_variant 0.45
clpC1 4039559 c.1146C>G synonymous_variant 0.45
clpC1 4039562 c.1143C>G synonymous_variant 0.46
clpC1 4039574 p.Ala377Gly missense_variant 0.46
clpC1 4039577 c.1128T>C synonymous_variant 0.47
clpC1 4039589 c.1116G>C synonymous_variant 0.47
clpC1 4039592 c.1113G>C synonymous_variant 0.47
clpC1 4039616 c.1089G>C synonymous_variant 0.45
clpC1 4039622 c.1083C>G synonymous_variant 0.48
clpC1 4039649 c.1056G>C synonymous_variant 0.51
clpC1 4039652 c.1053G>C synonymous_variant 0.51
clpC1 4039661 c.1044T>C synonymous_variant 0.51
clpC1 4039682 c.1023C>G synonymous_variant 0.49
clpC1 4039694 c.1011G>T synonymous_variant 0.48
clpC1 4039724 c.981A>G synonymous_variant 0.5
clpC1 4039748 c.957G>C synonymous_variant 0.52
clpC1 4039751 c.954A>G synonymous_variant 0.51
clpC1 4039756 c.949C>T synonymous_variant 0.5
clpC1 4039760 c.945T>C synonymous_variant 0.5
clpC1 4039766 c.939T>C synonymous_variant 0.51
clpC1 4039769 c.936C>G synonymous_variant 0.51
clpC1 4039790 c.915C>T synonymous_variant 0.54
clpC1 4039802 c.903G>C synonymous_variant 0.56
clpC1 4039817 c.888A>T synonymous_variant 0.58
clpC1 4039820 c.885T>G synonymous_variant 0.6
clpC1 4039829 c.874_876delTTGinsCTC synonymous_variant 0.59
clpC1 4039832 c.873C>G synonymous_variant 0.57
clpC1 4039850 c.855T>C synonymous_variant 0.64
clpC1 4039865 c.840T>C synonymous_variant 0.61
clpC1 4039898 c.807C>G synonymous_variant 0.55
clpC1 4039904 c.801A>G synonymous_variant 0.54
clpC1 4039913 c.792C>T synonymous_variant 0.54
clpC1 4039931 c.774T>C synonymous_variant 0.44
clpC1 4039937 c.768G>C synonymous_variant 0.38
clpC1 4039946 c.759A>T synonymous_variant 0.36
clpC1 4039949 c.756G>C synonymous_variant 0.37
clpC1 4039952 c.753T>C synonymous_variant 0.37
clpC1 4039964 c.741C>T synonymous_variant 0.34
clpC1 4039979 c.726C>G synonymous_variant 0.31
clpC1 4039991 c.714G>C synonymous_variant 0.3
clpC1 4040000 c.705C>T synonymous_variant 0.31
clpC1 4040018 c.687G>C synonymous_variant 0.29
clpC1 4040021 c.684A>G synonymous_variant 0.3
clpC1 4040024 c.681A>G synonymous_variant 0.31
clpC1 4040027 c.678C>G synonymous_variant 0.3
clpC1 4040033 c.672G>C synonymous_variant 0.3
clpC1 4040051 c.654C>G synonymous_variant 0.26
clpC1 4040063 c.642G>C synonymous_variant 0.26
clpC1 4040069 c.636G>C synonymous_variant 0.25
clpC1 4040090 c.613_615delTCTinsAGC synonymous_variant 0.24
clpC1 4040093 c.612C>G synonymous_variant 0.24
clpC1 4040105 c.600C>G synonymous_variant 0.26
clpC1 4040138 c.567G>C synonymous_variant 0.24
clpC1 4040141 c.564C>T synonymous_variant 0.23
clpC1 4040144 c.561G>C synonymous_variant 0.23
clpC1 4040147 c.558A>G synonymous_variant 0.23
clpC1 4040162 c.543G>C synonymous_variant 0.19
clpC1 4040165 c.540G>C synonymous_variant 0.19
clpC1 4040168 c.537G>C synonymous_variant 0.19
clpC1 4040171 c.534C>G synonymous_variant 0.19
clpC1 4040180 c.525C>T synonymous_variant 0.19
clpC1 4040195 c.510G>C synonymous_variant 0.2
clpC1 4040207 c.498T>C synonymous_variant 0.16
clpC1 4040214 p.Ser164Asn missense_variant 0.18
clpC1 4040219 p.Ser162Ala missense_variant 0.18
clpC1 4040225 c.480A>C synonymous_variant 0.2
clpC1 4040228 c.477G>C synonymous_variant 0.26
clpC1 4040243 c.462C>A synonymous_variant 0.42
clpC1 4040252 c.453C>G synonymous_variant 0.4
clpC1 4040257 p.Ala150Thr missense_variant 0.4
clpC1 4040270 c.435C>T synonymous_variant 0.39
clpC1 4040273 c.432T>C synonymous_variant 0.39
clpC1 4040277 c.427_428delTCinsAG synonymous_variant 0.39
clpC1 4040279 c.426C>G synonymous_variant 0.4
clpC1 4040291 c.414G>C synonymous_variant 0.4
clpC1 4040326 c.379C>T synonymous_variant 0.31
clpC1 4040327 c.378G>A synonymous_variant 0.31
clpC1 4040333 c.372G>C synonymous_variant 0.29
clpC1 4040336 c.369G>C synonymous_variant 0.3
clpC1 4040348 c.357G>C synonymous_variant 0.28
clpC1 4040354 c.351A>G synonymous_variant 0.24
clpC1 4040357 c.348T>G synonymous_variant 0.24
clpC1 4040363 c.342A>C synonymous_variant 0.24
clpC1 4040369 c.336C>G synonymous_variant 0.21
clpC1 4040375 c.330G>C synonymous_variant 0.19
clpC1 4040380 c.325T>C synonymous_variant 0.2
clpC1 4040381 c.324T>C synonymous_variant 0.2
clpC1 4040387 c.318A>G synonymous_variant 0.2
clpC1 4040393 c.312G>C synonymous_variant 0.21
clpC1 4040411 c.294T>G synonymous_variant 0.22
clpC1 4040429 c.274_276delTTGinsCTT synonymous_variant 0.23
clpC1 4040437 c.268C>T synonymous_variant 0.26
clpC1 4040450 c.255A>G synonymous_variant 0.28
clpC1 4040459 c.246C>G synonymous_variant 0.27
clpC1 4040462 c.243C>G synonymous_variant 0.27
clpC1 4040465 c.240T>C synonymous_variant 0.27
clpC1 4040471 c.234T>C synonymous_variant 0.31
clpC1 4040477 c.228G>C synonymous_variant 0.33
clpC1 4040480 c.225T>G synonymous_variant 0.34
clpC1 4040495 c.210C>T synonymous_variant 0.36
clpC1 4040498 c.207G>A synonymous_variant 0.36
clpC1 4040522 c.183T>C synonymous_variant 0.39
clpC1 4040531 c.174T>G synonymous_variant 0.38
clpC1 4040539 c.166C>T synonymous_variant 0.3
clpC1 4040540 c.165G>T synonymous_variant 0.29
clpC1 4040546 c.159G>C synonymous_variant 0.3
clpC1 4040549 c.154_156delTTGinsCTT synonymous_variant 0.3
clpC1 4040552 c.153G>C synonymous_variant 0.3
clpC1 4040561 c.144A>G synonymous_variant 0.33
clpC1 4040573 c.132T>A synonymous_variant 0.35
clpC1 4040582 c.123G>C synonymous_variant 0.3
clpC1 4040588 c.117T>C synonymous_variant 0.29
clpC1 4040594 c.111G>C synonymous_variant 0.28
clpC1 4040600 c.103_105delTTAinsCTT synonymous_variant 0.27
clpC1 4040603 c.102T>G synonymous_variant 0.27
clpC1 4040606 c.99T>C synonymous_variant 0.27
clpC1 4040644 c.61A>C synonymous_variant 0.19
clpC1 4040648 c.57G>A synonymous_variant 0.18
embC 4240671 p.Thr270Ile missense_variant 1.0
embA 4242643 c.-590C>T upstream_gene_variant 1.0
embA 4242970 c.-263C>T upstream_gene_variant 1.0
embA 4244220 c.988C>T synonymous_variant 1.0
embB 4246551 p.Asn13Ser missense_variant 1.0
embB 4246864 c.351C>T synonymous_variant 1.0
embB 4247646 p.Glu378Ala missense_variant 1.0
embB 4248085 c.1572T>G synonymous_variant 0.15
embB 4248168 p.Thr552Ile missense_variant 0.15
embB 4248170 p.Ala553Ser missense_variant 0.15
embB 4248173 p.Val554Met missense_variant 0.16
embB 4248182 p.Met557Leu missense_variant 0.16
embB 4248220 c.1707A>G synonymous_variant 0.15
embB 4248223 c.1710G>T synonymous_variant 0.15
embB 4248242 p.Val577Ile missense_variant 0.16
embB 4248266 c.1753C>T synonymous_variant 0.18
embB 4249469 p.Leu986Met missense_variant 0.19
embB 4249480 c.2967G>A synonymous_variant 0.18
embB 4249483 c.2970C>G synonymous_variant 0.18
embB 4249486 c.2973T>G synonymous_variant 0.18
embB 4249487 c.2974T>C synonymous_variant 0.18
embB 4249492 c.2979C>G synonymous_variant 0.18
embB 4249525 c.3012T>C synonymous_variant 0.18
embB 4249529 p.Ile1006Val missense_variant 0.17
embB 4249538 p.Ile1009Val missense_variant 0.16
embB 4249581 p.Leu1023Gln missense_variant 0.15
aftB 4267858 p.Ile327Val missense_variant 1.0
aftB 4269351 c.-515C>T upstream_gene_variant 1.0
ubiA 4269387 p.Glu149Asp missense_variant 1.0
aftB 4269606 c.-770T>C upstream_gene_variant 1.0
whiB6 4338595 c.-75delG upstream_gene_variant 1.0
gid 4407588 c.615A>G synonymous_variant 0.98