EBG00000313339 - n.781_782delAA
Drug resistance types
40 Sensitive
18 RR-TB
30 HR-TB
5 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
48 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 16 |
| lineage4.9 | 42 |
| lineage2.2 | 1 |
| lineage4.9;lineage2.2 | 1 |
| lineage2.2.1 | 12 |
| lineage4.4.1.1.1 | 1 |
| lineage2 | 1 |
| La1.7.1 | 1 |
| lineage2.2.2 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage4.8 | 2 |
| 35 | |
| lineage9;lineage3.1 | 1 |
| lineage4.1.3 | 1 |
| lineage3 | 3 |
| lineage4.1.2.1 | 5 |
| lineage1.2.1.1 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.3.3 | 2 |
| lineage1 | 2 |
| lineage4.1.2 | 1 |
| lineage4.7 | 1 |
| lineage4.1 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.1.1.3.1 | 2 |
| lineage6 | 1 |
| lineage4.8.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.3.1.1 | 2 |
| lineage4.4.1.1;lineage1.2.2.1 | 1 |
| La1.2 | 1 |
| lineage1.1.2 | 1 |
| lineage2.2.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 146 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR10809074 | Sensitive | lineage4 | None | SRR10808399 | Sensitive | lineage4 | None | SRR1180250 | Other | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1172717 | Other | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR13861434 | RR-TB | lineage4.9 | None | SRR13861549 | RR-TB | lineage4.9 | None | SRR18002954 | Other | lineage2.2.1 | None | SRR18002908 | Other | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR19303820 | RR-TB | lineage4.8 | None | ERR158583 | HR-TB | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | SRR8692887 | Other | None | SRR3675488 | HR-TB | None | SRR3675222 | Other | None | ERR4815780 | MDR-TB | lineage4.1.3 | None | ERR4814681 | Other | lineage2.2.1 | None | ERR4815467 | Other | lineage3 | None | ERR4815572 | Other | lineage4.1.2.1 | None | SRR3675555 | HR-TB | None | SRR3675502 | Other | None | ERR2027257 | Other | lineage4.1.2.1 | None | SRR3675509 | Other | lineage4.9 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR3675550 | Other | None | ERR4817060 | RR-TB | None | ERR4816334 | Other | lineage4.6.2.2 | None | ERR212123 | Other | None | ERR212138 | HR-TB | lineage4 | None | ERR212121 | HR-TB | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4818988 | Other | lineage1 | None | ERR4816466 | HR-TB | None | ERR4816531 | Other | lineage4.1.2 | None | ERR4817189 | Other | lineage4.7 | None | ERR2513401 | HR-TB | lineage3 | None | ERR2446566 | Other | lineage4.1 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4818126 | RR-TB | lineage1 | None | ERR1035162 | Other | None | ERR4818507 | RR-TB | lineage4.1.2.1 | None | ERR2513223 | Other | lineage4.1.2.1 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | SRR5007168 | RR-TB | lineage4.9 | None | ERR4818574 | Other | lineage6 | None | ERR4819198 | Other | lineage2.2.1 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR4817555 | RR-TB | lineage3 | None | SRR5341418 | Other | None | ERR4820369 | Other | lineage2.2.1 | None | ERR4819555 | Other | lineage4.8 | None | ERR4819980 | Other | lineage4.1.2.1 | None | SRR5341456 | Other | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR2514645 | Other | lineage4.3.4.1 | None | SRR6045519 | HR-TB | None | ERR4820107 | RR-TB | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | SRR6045537 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045805 | Other | lineage4.3.1.1 | None | SRR6046210 | Other | lineage4 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045071 | Other | lineage4.3.1.1 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6046250 | Other | lineage4.9 | None | ERR2851354 | RR-TB | lineage4.9 | None | SRR6046299 | HR-TB | None | SRR6046281 | Other | lineage4.9 | None | SRR6046492 | Other | None | ERR067681 | HR-TB | None | ERR11465711 | Other | lineage4.4.1.1;lineage1.2.2.1 | None | SRR6046733 | Pre-XDR-TB | lineage2.2.1 | None | ERR1034652 | Other | None | ERR3797046 | HR-TB | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283014 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3445504 | HR-TB | None | ERR133986 | HR-TB | None | ERR3283028 | Other | None | ERR3283055 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR387051 | HR-TB | None | ERR3797064 | Sensitive | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797087 | Sensitive | lineage4 | None | ERR403298 | HR-TB | lineage4 | None | ERR4769457 | Other | lineage4.9 | None | ERR473332 | Other | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4798099 | Other | None | ERR4798406 | HR-TB | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4811493 | HR-TB | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR6358991 | HR-TB | None | ERR6866639 | Other | None | ERR6866410 | Sensitive | None |
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