Run ID: SRR3675492
Sample name:
Date: 2024-04-15T20:05:47.416539
Number of reads: 247646
Percentage reads mapped: 21.53
Median coverage: 5.0
Strain: La1.7;lineage4.9
Spoligotype:
Drug-resistance: Other
Lineage | Family | RDs | Frequency |
---|---|---|---|
La1.7 | M.bovis | None | 0.07 |
lineage4 | Euro-American | None | 0.9 |
lineage4.9 | Euro-American (H37Rv-like) | None | 0.96 |
Drug | Resistance | Supporting mutations | WHO confidence | Comment |
---|---|---|---|---|
rifampicin | ||||
isoniazid | ||||
ethambutol | ||||
pyrazinamide | ||||
streptomycin | rrs | n.190G>A | Mutation from literature | |
n.462C>T | Uncertain significance | Mutation from literature | ||
fluoroquinolones | ||||
moxifloxacin | ||||
ofloxacin | ||||
levofloxacin | ||||
ciprofloxacin | ||||
aminoglycosides | ||||
amikacin | ||||
capreomycin | ||||
kanamycin | ||||
cycloserine | ||||
ethionamide | ||||
clofazimine | ||||
para-aminosalicylic_acid | ||||
delamanid | fbiC | c.916_918delTTCinsGG | Assoc w R - Interim | Confers DLM-PMD cross-resistance |
bedaquiline | ||||
linezolid |
Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs | Confidence | Comment |
---|---|---|---|---|---|---|---|
fbiC | 1303846 | c.916_918delTTCinsGG | frameshift_variant&missense_variant | 1.0 | delamanid | Assoc w R - Interim | Confers DLM-PMD cross-resistance |
pretomanid | Assoc w R - Interim | Confers DLM-PMD cross-resistance | |||||
rrs | 1472035 | n.190G>A | non_coding_transcript_exon_variant | 1.0 | streptomycin | Mutation from literature | |
rrs | 1472307 | n.462C>T | non_coding_transcript_exon_variant | 1.0 | streptomycin | Uncertain significance | Mutation from literature |
Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs | Confidence |
---|---|---|---|---|---|---|
dnaA | 609 | c.609C>A | synonymous_variant | 1.0 | isoniazid | |
dnaA | 615 | c.615C>T | synonymous_variant | 1.0 | isoniazid | |
dnaA | 633 | c.633T>C | synonymous_variant | 1.0 | isoniazid | |
dnaA | 636 | c.636C>G | synonymous_variant | 1.0 | isoniazid | |
dnaA | 645 | c.645A>G | synonymous_variant | 1.0 | isoniazid | Not assoc w R - Interim |
dnaA | 654 | c.654A>G | synonymous_variant | 1.0 | isoniazid | |
dnaA | 660 | c.660G>C | synonymous_variant | 1.0 | isoniazid | Not assoc w R - Interim |
dnaA | 663 | c.663A>C | synonymous_variant | 1.0 | isoniazid | |
dnaA | 669 | c.669C>T | synonymous_variant | 1.0 | isoniazid | |
dnaA | 672 | c.672T>C | synonymous_variant | 1.0 | isoniazid | Not assoc w R - Interim |
dnaA | 675 | c.675C>G | synonymous_variant | 1.0 | isoniazid | Not assoc w R - Interim |
dnaA | 678 | c.678A>G | synonymous_variant | 1.0 | isoniazid | Not assoc w R - Interim |
dnaA | 682 | c.682_684delTTGinsCC | frameshift_variant&missense_variant | 1.0 | isoniazid | Uncertain significance |
dnaA | 690 | c.690G>C | synonymous_variant | 1.0 | isoniazid | |
dnaA | 693 | c.693A>C | synonymous_variant | 1.0 | isoniazid | |
dnaA | 699 | c.699G>T | synonymous_variant | 1.0 | isoniazid | |
dnaA | 705 | c.705A>G | synonymous_variant | 1.0 | isoniazid | |
dnaA | 708 | c.708T>C | synonymous_variant | 1.0 | isoniazid | |
dnaA | 741 | c.741T>C | synonymous_variant | 1.0 | isoniazid | Not assoc w R - Interim |
dnaA | 750 | c.750C>G | synonymous_variant | 1.0 | isoniazid | |
dnaA | 756 | c.756T>C | synonymous_variant | 1.0 | isoniazid | |
gyrB | 6205 | c.966C>T | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6214 | c.975G>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6223 | c.984G>C | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrB | 6238 | c.999G>A | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrB | 6242 | p.Arg335Lys | missense_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6250 | c.1011A>G | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrB | 6253 | c.1014G>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6259 | p.Asp340Glu | missense_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6271 | c.1032C>T | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6286 | c.1047T>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6295 | c.1056A>G | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6298 | c.1059C>G | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6299 | c.1060C>T | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6307 | c.1068T>G | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrB | 6326 | p.Ser363Ala | missense_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6673 | c.-629A>T | upstream_gene_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6680 | c.1441C>T | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrB | 6685 | c.1446C>T | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 6700 | c.-602T>C | upstream_gene_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6703 | c.-599G>C | upstream_gene_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6709 | c.-593A>G | upstream_gene_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6712 | c.-590G>C | upstream_gene_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6730 | c.-572A>G | upstream_gene_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6745 | c.1506T>C | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 6751 | c.-551G>C | upstream_gene_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 6760 | c.-542G>C | upstream_gene_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6793 | c.1554T>C | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrB | 6797 | p.Gly520Thr | missense_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6802 | c.1563G>A | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7168 | c.-134C>G | upstream_gene_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7178 | c.-124T>C | upstream_gene_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 7198 | c.1959C>T | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | ||||||
gyrB | 7210 | p.Asp657Glu | missense_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7511 | c.210C>T | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7526 | c.225G>C | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7532 | c.231T>G | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7547 | c.246C>T | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7565 | c.264C>T | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7585 | p.Ser95Thr | missense_variant | 1.0 | levofloxacin | Not assoc w R |
moxifloxacin | Not assoc w R | |||||
gyrA | 7763 | c.462T>G | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7784 | c.483A>G | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7793 | c.492G>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7796 | c.495G>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7799 | c.498A>G | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7832 | c.531G>T | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7835 | c.534A>G | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7847 | c.546G>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7853 | c.552C>T | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7859 | c.558A>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7886 | c.585T>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7892 | c.591G>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7898 | p.Asp199Glu | missense_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8054 | c.753T>C | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8057 | c.756A>G | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8069 | c.768T>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8084 | c.783G>A | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8090 | c.789C>A | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8096 | c.795T>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8099 | c.798T>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8106 | c.805C>T | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8121 | c.820T>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8126 | c.825G>C | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8156 | c.855T>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8177 | c.876A>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8184 | p.Lys295Arg | missense_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8198 | c.897T>C | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8207 | c.906T>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8210 | c.909G>A | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8219 | c.918T>C | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8225 | c.924T>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8228 | c.927G>A | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8240 | c.939C>G | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8247 | c.946_948delATCinsGG | frameshift_variant&missense_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8264 | c.963T>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8267 | c.966G>C | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8283 | c.982_984delATCinsCG | frameshift_variant&missense_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8288 | c.987T>C | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8294 | c.993T>C | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8324 | c.1023T>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8327 | c.1026C>G | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8330 | c.1029C>G | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8339 | c.1038A>G | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8340 | c.1039_1041delGCGinsTC | frameshift_variant&missense_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8345 | c.1044C>T | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | ||||||
gyrA | 8366 | c.1065G>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8372 | c.1071G>A | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8382 | p.Leu361Met | missense_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8387 | c.1086C>T | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8393 | c.1092T>C | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8486 | c.1185T>C | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8489 | c.1188A>G | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8501 | c.1200G>A | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8571 | c.1270C>T | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8627 | c.1326C>T | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8636 | c.1335A>T | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8642 | c.1341A>G | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8645 | c.1344C>T | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8648 | c.1347G>A | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8655 | p.Ile452Val | missense_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8672 | c.1371A>G | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8678 | c.1377G>A | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8684 | c.1383G>A | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8693 | c.1392T>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8699 | c.1398A>G | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8705 | c.1404C>T | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8708 | c.1407G>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8711 | c.1410A>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8714 | c.1413A>G | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8720 | c.1419G>A | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8723 | c.1422G>T | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8729 | c.1428T>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8732 | c.1431G>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8752 | p.Ala484Gly | missense_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8756 | c.1455A>G | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8765 | p.Asp488Glu | missense_variant | 1.0 | levofloxacin | Uncertain significance |
moxifloxacin | Uncertain significance | |||||
gyrA | 8767 | p.Arg489Lys | missense_variant | 1.0 | levofloxacin | Uncertain significance |
moxifloxacin | Uncertain significance | |||||
gyrA | 8774 | c.1473C>T | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8783 | c.1482G>T | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8786 | c.1485T>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8792 | c.1491G>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8810 | c.1509A>G | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8813 | c.1512C>T | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | ||||||
gyrA | 8840 | c.1539C>T | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8852 | c.1551T>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8858 | c.1557T>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8870 | c.1569G>C | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8873 | c.1572A>G | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8876 | c.1575C>T | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8903 | c.1602T>C | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8915 | c.1614A>G | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8918 | c.1617C>G | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9291 | c.1990C>T | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9304 | p.Gly668Glu | missense_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9308 | p.Asp669Glu | missense_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9315 | c.2014C>T | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9335 | c.2034G>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9345 | c.2044A>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9374 | c.2073G>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9377 | c.2076A>G | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9383 | c.2082T>C | synonymous_variant | 1.0 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9386 | c.2085T>C | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
Rv0565c | 656448 | c.1023T>C | synonymous_variant | 1.0 | ethionamide | |
Rv0565c | 656487 | c.984T>C | synonymous_variant | 1.0 | ethionamide | Not assoc w R - Interim |
Rv0565c | 656511 | c.960T>C | synonymous_variant | 1.0 | ethionamide | Not assoc w R - Interim |
Rv0565c | 656523 | c.948G>A | synonymous_variant | 1.0 | ethionamide | |
Rv0565c | 656535 | c.936C>A | synonymous_variant | 1.0 | ethionamide | |
Rv0565c | 656540 | p.Ser311Gly | missense_variant | 1.0 | ethionamide | |
Rv0565c | 656543 | p.Thr310Ala | missense_variant | 1.0 | ethionamide | |
Rv0565c | 656546 | p.Ile309Val | missense_variant | 1.0 | ethionamide | Uncertain significance |
Rv0565c | 656550 | c.919_921delAACinsGA | frameshift_variant&missense_variant | 1.0 | ethionamide | Uncertain significance |
Rv0565c | 656556 | c.915G>C | synonymous_variant | 1.0 | ethionamide | Not assoc w R - Interim |
Rv0565c | 657701 | c.-231C>G | upstream_gene_variant | 1.0 | ethionamide | |
Rv0565c | 657734 | c.-264T>C | upstream_gene_variant | 1.0 | ethionamide | |
nusG | 734111 | c.-143A>G | upstream_gene_variant | 1.0 | rifampicin | |
nusG | 734114 | c.-140A>G | upstream_gene_variant | 1.0 | rifampicin | |
nusG | 734120 | c.-134T>C | upstream_gene_variant | 1.0 | rifampicin | Uncertain significance |
nusG | 734129 | c.-125G>C | upstream_gene_variant | 1.0 | rifampicin | |
nusG | 734143 | c.-111_-110delCGinsTC | upstream_gene_variant | 1.0 | rifampicin | |
nusG | 734147 | c.-107T>C | upstream_gene_variant | 1.0 | rifampicin | |
nusG | 734150 | c.-104G>C | upstream_gene_variant | 1.0 | rifampicin | |
nusG | 734171 | c.-83C>A | upstream_gene_variant | 1.0 | rifampicin | |
nusG | 734173 | c.-81_-80delCCinsGG | upstream_gene_variant | 1.0 | rifampicin | |
nusG | 734177 | c.-77T>C | upstream_gene_variant | 1.0 | rifampicin | |
nusG | 734180 | c.-74T>C | upstream_gene_variant | 1.0 | rifampicin | |
nusG | 734194 | c.-60C>G | upstream_gene_variant | 1.0 | rifampicin | |
nusG | 734201 | c.-53G>C | upstream_gene_variant | 1.0 | rifampicin | |
nusG | 734205 | c.-49A>C | upstream_gene_variant | 1.0 | rifampicin | |
nusG | 734224 | c.-30G>A | upstream_gene_variant | 1.0 | rifampicin | Uncertain significance |
nusG | 734227 | c.-27C>T | upstream_gene_variant | 1.0 | rifampicin | |
nusG | 734233 | c.-21T>C | upstream_gene_variant | 1.0 | rifampicin | |
nusG | 734236 | c.-18C>T | upstream_gene_variant | 1.0 | rifampicin | |
nusG | 734391 | c.138C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
nusG | 734403 | c.150C>T | synonymous_variant | 1.0 | rifampicin | |
nusG | 734407 | p.Val52Ile | missense_variant | 1.0 | rifampicin | |
nusG | 734418 | c.165C>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
nusG | 734421 | c.168A>G | synonymous_variant | 1.0 | rifampicin | |
nusG | 734424 | c.171G>A | synonymous_variant | 1.0 | rifampicin | |
nusG | 734439 | c.186C>G | synonymous_variant | 1.0 | rifampicin | |
nusG | 734451 | c.198G>C | synonymous_variant | 1.0 | rifampicin | |
nusG | 734454 | c.201A>G | synonymous_variant | 1.0 | rifampicin | |
nusG | 734460 | c.207G>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
nusG | 734505 | c.252G>T | synonymous_variant | 1.0 | rifampicin | |
nusG | 734532 | c.279A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
nusG | 734541 | c.288A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
nusG | 734553 | c.300C>G | synonymous_variant | 1.0 | rifampicin | |
nusG | 734556 | c.303C>T | synonymous_variant | 1.0 | rifampicin | |
nusG | 734559 | c.306T>C | synonymous_variant | 1.0 | rifampicin | |
nusG | 734571 | c.318C>G | synonymous_variant | 1.0 | rifampicin | |
nusG | 734580 | c.327T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
nusG | 734589 | c.336G>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 760181 | c.375T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760184 | c.378A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760235 | c.429T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760298 | c.492G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760310 | c.504G>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 760313 | c.507G>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 760328 | c.522G>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 760331 | c.525G>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 760340 | c.534G>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 760358 | c.552C>G | synonymous_variant | 1.0 | rifampicin | |
rpoB | 760361 | c.555T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760376 | p.Asp190Glu | missense_variant | 1.0 | rifampicin | Uncertain significance |
rpoB | 760406 | c.600G>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 760424 | c.618C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760430 | c.624T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760451 | c.645C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760457 | c.651C>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760463 | c.657C>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760475 | c.669A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760481 | c.675G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760484 | c.678A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760487 | c.681G>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 760508 | c.702G>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 760511 | c.705G>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 760514 | c.708C>G | synonymous_variant | 1.0 | rifampicin | |
rpoB | 760522 | p.Ser239Asn | missense_variant | 1.0 | rifampicin | Uncertain significance |
rpoB | 760532 | c.726T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760533 | p.Val243His | missense_variant | 1.0 | rifampicin | |
rpoB | 760547 | c.741G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760571 | c.765G>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 760591 | p.Val262Ala | missense_variant | 1.0 | rifampicin | |
rpoB | 760611 | c.805T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760643 | c.837G>A | synonymous_variant | 1.0 | rifampicin | |
rpoB | 760646 | c.840C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760655 | c.849A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760661 | c.855A>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760670 | c.864G>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 760674 | c.868T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760679 | c.873A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760683 | c.877T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760718 | c.912C>T | synonymous_variant | 1.0 | rifampicin | |
rpoB | 760724 | c.918T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760730 | c.924T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760796 | c.990A>G | synonymous_variant | 1.0 | rifampicin | |
rpoB | 760805 | c.999G>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 760817 | c.1011A>G | synonymous_variant | 1.0 | rifampicin | |
rpoB | 760820 | c.1014T>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 760830 | c.1024_1026delTTGinsCC | frameshift_variant&missense_variant | 1.0 | rifampicin | |
rpoB | 760845 | p.Thr347His | missense_variant | 1.0 | rifampicin | |
rpoB | 760886 | c.1080A>G | synonymous_variant | 1.0 | rifampicin | |
rpoB | 760919 | c.1113C>G | synonymous_variant | 1.0 | rifampicin | |
rpoB | 760925 | c.1119T>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 760928 | c.1122G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760931 | c.1125C>G | synonymous_variant | 1.0 | rifampicin | |
rpoB | 760946 | c.1140A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760970 | c.1164G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760982 | c.1176G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760985 | c.1179G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760988 | c.1182C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 760991 | c.1185G>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761006 | c.1200C>T | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761015 | c.1209G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 761021 | c.1215G>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761027 | c.1221A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 761036 | c.1230G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 761037 | c.1231T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 761057 | c.1251G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 761096 | c.1290G>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761097 | c.1291_1293delAGCinsTCG | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761102 | c.1296A>G | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761132 | c.1326G>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 761133 | c.1327T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 761141 | c.1335C>T | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761147 | c.1341C>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 761150 | c.1344A>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 761168 | c.1362C>G | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761171 | c.1365C>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 761180 | c.1374A>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 761192 | c.1386C>G | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761195 | c.1389G>T | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761201 | c.1395G>A | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761204 | c.1398C>A | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761207 | c.1401C>T | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761234 | c.1428G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 761249 | c.1443A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 761252 | c.1446C>G | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761261 | c.1455G>C | synonymous_variant | 0.9 | rifampicin | Not assoc w R - Interim |
rpoB | 761273 | c.1467T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 761282 | c.1476C>T | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761318 | c.1512G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 761414 | c.1608A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 761465 | c.1659G>T | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761510 | c.1704T>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761537 | c.1731C>G | synonymous_variant | 0.96 | rifampicin | Not assoc w R - Interim |
rpoB | 761573 | c.1767C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 761579 | c.1773G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 761606 | c.1800C>G | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761612 | c.1806G>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 761615 | c.1809A>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 761636 | c.1830G>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 761645 | c.1839C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 761648 | c.1842T>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761657 | c.1851C>A | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761675 | c.1869G>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761682 | c.1876C>T | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761687 | c.1881C>T | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761717 | c.1911C>G | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761726 | c.1920A>G | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761727 | p.Ser641Ala | missense_variant | 1.0 | rifampicin | |
rpoB | 761732 | c.1926C>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 761741 | c.1935G>A | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761753 | c.1947C>G | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761765 | c.1959T>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761768 | c.1962G>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761778 | p.Asn658Ala | missense_variant | 1.0 | rifampicin | |
rpoB | 761792 | c.1986T>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761813 | c.2007T>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761819 | c.2013G>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761834 | c.2028T>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761848 | p.Cys681Ser | missense_variant | 1.0 | rifampicin | |
rpoB | 761852 | c.2046C>G | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761864 | c.2058G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 761867 | c.2061C>T | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761873 | c.2067A>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761876 | c.2070C>G | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761879 | c.2073G>A | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761885 | c.2079T>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761894 | c.2088C>T | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761903 | c.2097T>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761909 | c.2103T>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761912 | c.2106T>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761915 | p.Asp703Glu | missense_variant | 1.0 | rifampicin | |
rpoB | 761916 | p.Asp704Asn | missense_variant | 1.0 | rifampicin | |
rpoB | 761921 | c.2115C>T | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761930 | c.2124G>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 761955 | c.2149_2151delATCinsGG | frameshift_variant&missense_variant | 1.0 | rifampicin | |
rpoB | 761972 | c.2166C>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 761990 | c.2184G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 762011 | c.2205G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 762029 | c.2223C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 762032 | c.2226C>T | synonymous_variant | 1.0 | rifampicin | |
rpoB | 762038 | c.2232C>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 762053 | c.2247T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 762056 | c.2250G>A | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 762062 | c.2256T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 762065 | c.2259T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 762083 | c.2277T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 762086 | c.2280G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 762101 | c.2295C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 762114 | p.Ile770Val | missense_variant | 1.0 | rifampicin | Uncertain significance |
rpoB | 762143 | c.2337T>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 762149 | c.2343G>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 762167 | c.2361T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 762170 | c.2364C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 762179 | c.2373C>T | synonymous_variant | 1.0 | rifampicin | |
rpoB | 762185 | c.2379G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 762212 | c.2406G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 762233 | c.2427G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 762254 | c.2448T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 762260 | c.2454C>T | synonymous_variant | 1.0 | rifampicin | |
rpoB | 762266 | c.2460T>C | synonymous_variant | 1.0 | rifampicin | |
rpoB | 762795 | p.Asp997Asn | missense_variant | 1.0 | rifampicin | Uncertain significance |
rpoB | 762799 | p.Ala998Gly | missense_variant | 1.0 | rifampicin | Uncertain significance |
rpoB | 762813 | p.Met1003Val | missense_variant | 1.0 | rifampicin | |
rpoB | 762818 | c.3012C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 762857 | c.3051C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 762929 | c.3123G>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 762956 | c.-414G>C | upstream_gene_variant | 1.0 | rifampicin | |
rpoB | 762959 | c.3153G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 762962 | c.3156C>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 762971 | c.3165G>A | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 762983 | c.-387C>G | upstream_gene_variant | 1.0 | rifampicin | |
rpoB | 762995 | c.3189G>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 763031 | c.3225T>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 763040 | c.3234C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 763053 | c.3247T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 763070 | c.3264T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 763082 | c.3276C>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 763085 | c.3279C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 763094 | c.3288G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 763115 | c.3309T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoB | 763127 | c.3321G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 763139 | c.-231C>T | upstream_gene_variant | 1.0 | rifampicin | |
rpoC | 763142 | c.-228C>G | upstream_gene_variant | 1.0 | rifampicin | |
rpoB | 763166 | c.3360A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 763169 | c.-201A>G | upstream_gene_variant | 1.0 | rifampicin | |
rpoC | 763190 | c.-180C>T | upstream_gene_variant | 1.0 | rifampicin | |
rpoC | 763193 | c.-177C>T | upstream_gene_variant | 1.0 | rifampicin | |
rpoC | 763202 | c.-168A>G | upstream_gene_variant | 1.0 | rifampicin | |
rpoC | 763206 | c.-164_-162delAGTinsTCG | upstream_gene_variant | 1.0 | rifampicin | |
rpoC | 763220 | c.-150G>C | upstream_gene_variant | 1.0 | rifampicin | |
rpoC | 763226 | c.-144A>G | upstream_gene_variant | 1.0 | rifampicin | |
rpoC | 763235 | c.-135A>G | upstream_gene_variant | 1.0 | rifampicin | |
rpoB | 763238 | c.3432T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 763444 | c.75T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 763456 | c.87A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 763468 | c.99G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 763483 | c.114G>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 763486 | c.117T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 763504 | c.135C>T | synonymous_variant | 1.0 | rifampicin | |
rpoC | 763528 | c.159G>A | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 763546 | c.177A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 763570 | c.201G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 763594 | c.225C>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 763603 | c.234C>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 763615 | c.246G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 763618 | c.249C>T | synonymous_variant | 1.0 | rifampicin | |
rpoC | 763624 | c.255C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 763648 | c.279C>G | synonymous_variant | 1.0 | rifampicin | |
rpoC | 763660 | c.291T>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 763666 | c.297G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 763669 | c.300C>G | synonymous_variant | 0.95 | rifampicin | Not assoc w R - Interim |
rpoC | 763696 | c.327T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 763699 | c.330G>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 763702 | c.333C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 763709 | c.340C>T | synonymous_variant | 1.0 | rifampicin | |
rpoC | 763714 | c.345G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 763717 | c.348T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 763729 | c.360G>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 763732 | c.363C>G | synonymous_variant | 1.0 | rifampicin | |
rpoC | 763735 | c.366G>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 763765 | c.396T>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 763768 | c.399C>G | synonymous_variant | 1.0 | rifampicin | |
rpoC | 763781 | p.Ser138Ala | missense_variant | 1.0 | rifampicin | |
rpoC | 763792 | p.Glu141Asp | missense_variant | 1.0 | rifampicin | |
rpoC | 763807 | c.438T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 763816 | c.447C>G | synonymous_variant | 1.0 | rifampicin | |
rpoC | 763822 | c.453C>G | synonymous_variant | 1.0 | rifampicin | |
rpoC | 763858 | c.489A>G | synonymous_variant | 1.0 | rifampicin | |
rpoC | 763900 | c.531G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 763960 | c.591T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 763987 | c.618C>T | synonymous_variant | 1.0 | rifampicin | |
rpoC | 763991 | c.622_624delATCinsCG | frameshift_variant&missense_variant | 1.0 | rifampicin | |
rpoC | 763996 | c.627T>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 764024 | c.655_657delTTGinsCC | frameshift_variant&missense_variant | 1.0 | rifampicin | |
rpoC | 764044 | c.675T>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 764059 | c.690G>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 764077 | c.708C>G | synonymous_variant | 1.0 | rifampicin | |
rpoC | 764083 | c.714A>G | synonymous_variant | 1.0 | rifampicin | |
rpoC | 764254 | c.885G>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764266 | c.897T>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 764269 | c.900G>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 764272 | c.903G>T | synonymous_variant | 1.0 | rifampicin | |
rpoC | 764278 | c.909A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764302 | c.933C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764308 | c.939G>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 764311 | c.942C>G | synonymous_variant | 1.0 | rifampicin | |
rpoC | 764383 | c.1014C>G | synonymous_variant | 1.0 | rifampicin | |
rpoC | 764387 | c.1018_1020delTTGinsCC | frameshift_variant&missense_variant | 1.0 | rifampicin | |
rpoC | 764405 | c.1036A>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764428 | c.1059G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764431 | c.1062G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764434 | c.1065A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764446 | c.1077T>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 764449 | c.1080G>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 764452 | c.1083T>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 764458 | c.1089G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764461 | c.1092A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764497 | c.1128A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764503 | c.1134G>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 764521 | c.1152T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764527 | c.1158C>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764530 | c.1161C>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764536 | c.1167G>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 764548 | c.1179G>A | synonymous_variant | 1.0 | rifampicin | |
rpoC | 764566 | c.1197C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764575 | c.1206T>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764581 | c.1212T>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 764611 | c.1242G>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 764650 | c.1281G>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764716 | c.1347G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764752 | c.1383G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764764 | c.1395T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764803 | c.1434C>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764809 | c.1440C>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R |
rpoC | 764812 | c.1443C>G | synonymous_variant | 1.0 | rifampicin | |
rpoC | 764815 | c.1446A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764824 | c.1455T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764833 | c.1464A>G | synonymous_variant | 1.0 | rifampicin | |
rpoC | 764836 | c.1467G>A | synonymous_variant | 1.0 | rifampicin | |
rpoC | 764842 | c.1473C>T | synonymous_variant | 1.0 | rifampicin | |
rpoC | 764858 | c.1489T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764869 | c.1500C>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 764875 | c.1506C>G | synonymous_variant | 1.0 | rifampicin | |
rpoC | 764893 | c.1524T>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 764896 | c.1527C>T | synonymous_variant | 1.0 | rifampicin | |
rpoC | 764911 | c.1542A>G | synonymous_variant | 1.0 | rifampicin | |
rpoC | 764968 | c.1599T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 765349 | c.1980T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 765352 | c.1983G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 765356 | p.Met663Val | missense_variant | 1.0 | rifampicin | |
rpoC | 765370 | c.2001G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 765383 | p.Met672Leu | missense_variant | 1.0 | rifampicin | Uncertain significance |
rpoC | 765394 | c.2025G>A | synonymous_variant | 1.0 | rifampicin | |
rpoC | 765409 | c.2040T>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 765412 | c.2043T>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 765421 | c.2052C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 765451 | c.2082C>G | synonymous_variant | 1.0 | rifampicin | |
rpoC | 765454 | c.2085C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 765478 | c.2109T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 765499 | c.2130C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 765508 | c.2139C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 765541 | c.2172C>G | synonymous_variant | 1.0 | rifampicin | |
rpoC | 765547 | c.2178C>A | synonymous_variant | 1.0 | rifampicin | |
rpoC | 765556 | c.2187G>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 765607 | c.2238C>G | synonymous_variant | 1.0 | rifampicin | |
rpoC | 765611 | p.His748Ala | missense_variant | 1.0 | rifampicin | |
rpoC | 765619 | c.2250G>A | synonymous_variant | 1.0 | rifampicin | |
rpoC | 765625 | c.2256C>T | synonymous_variant | 1.0 | rifampicin | |
rpoC | 765631 | p.Asp754Glu | missense_variant | 1.0 | rifampicin | |
rpoC | 765676 | c.2307G>A | synonymous_variant | 1.0 | rifampicin | |
rpoC | 765688 | c.2319G>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 765694 | c.2325G>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 765700 | c.2331T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 765724 | c.2355C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 765734 | c.2365T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 765751 | c.2382C>G | synonymous_variant | 1.0 | rifampicin | |
rpoC | 765752 | p.Asp795Ser | missense_variant | 1.0 | rifampicin | |
rpoC | 765772 | c.2403C>G | synonymous_variant | 1.0 | rifampicin | |
rpoC | 765778 | c.2409C>G | synonymous_variant | 1.0 | rifampicin | |
rpoC | 765781 | p.Asp804Glu | missense_variant | 1.0 | rifampicin | |
rpoC | 765784 | c.2415C>G | synonymous_variant | 1.0 | rifampicin | |
rpoC | 765796 | c.2427C>T | synonymous_variant | 1.0 | rifampicin | |
rpoC | 765811 | c.2442T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 765826 | c.2457T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 765835 | c.2466C>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 765850 | c.2481G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 765865 | c.2496C>T | synonymous_variant | 1.0 | rifampicin | |
rpoC | 765871 | c.2502T>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 765875 | p.Val836Ile | missense_variant | 1.0 | rifampicin | Uncertain significance |
rpoC | 765883 | c.2514C>G | synonymous_variant | 1.0 | rifampicin | |
rpoC | 765886 | c.2517C>G | synonymous_variant | 1.0 | rifampicin | |
rpoC | 765892 | c.2523T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 765946 | c.2577C>T | synonymous_variant | 1.0 | rifampicin | |
rpoC | 765961 | c.2592G>A | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 765962 | c.2593T>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 765967 | c.2598C>G | synonymous_variant | 1.0 | rifampicin | |
rpoC | 765994 | c.2625A>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 766003 | c.2634G>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766009 | c.2640G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 766010 | c.2641_2642delTCinsAG | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766447 | c.3078T>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766480 | c.3111C>G | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766484 | c.3115_3117delGTAinsAC | frameshift_variant&missense_variant | 1.0 | rifampicin | |
rpoC | 766495 | c.3126C>G | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766522 | c.3153C>T | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766525 | c.3156G>T | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766528 | c.3159T>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766534 | c.3165C>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 766549 | c.3180G>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766564 | c.3195C>T | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766565 | p.Ile1066Val | missense_variant | 1.0 | rifampicin | Uncertain significance |
rpoC | 766573 | c.3204T>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766585 | c.3216T>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766607 | c.3238_3240delATCinsCG | frameshift_variant&missense_variant | 1.0 | rifampicin | |
rpoC | 766618 | c.3249G>T | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766624 | c.3255G>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766645 | c.3276A>G | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766657 | c.3288A>G | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766667 | p.Ser1100Ala | missense_variant | 1.0 | rifampicin | Uncertain significance |
rpoC | 766672 | c.3303T>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766726 | c.3357T>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766738 | c.3369G>T | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766750 | c.3381C>G | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766753 | c.3384C>T | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766765 | c.3396A>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 766774 | c.3405T>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766798 | c.3429C>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 766804 | c.3435A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 766843 | c.3474T>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 766861 | c.3492G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 766864 | c.3495G>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766894 | c.3525T>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766895 | c.3526T>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766900 | c.3531T>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766903 | c.3534C>T | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766918 | c.3549C>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 766933 | c.3564A>G | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766945 | c.3576A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 766960 | c.3591C>T | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766963 | c.3594T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 766972 | c.3603G>C | synonymous_variant | 1.0 | rifampicin | |
rpoC | 766996 | c.3627C>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 767033 | c.3664_3666delTCGinsAGT | synonymous_variant | 1.0 | rifampicin | |
rpoC | 767059 | c.3690T>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 767062 | c.3693C>A | synonymous_variant | 1.0 | rifampicin | |
rpoC | 767119 | c.3750A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 767134 | c.3765C>A | synonymous_variant | 1.0 | rifampicin | |
rpoC | 767152 | c.3783T>G | synonymous_variant | 1.0 | rifampicin | |
rpoC | 767155 | c.3786C>G | synonymous_variant | 1.0 | rifampicin | |
rpoC | 767167 | c.3798C>T | synonymous_variant | 1.0 | rifampicin | |
rpoC | 767180 | p.Ala1271Gln | missense_variant | 1.0 | rifampicin | |
rpoC | 767191 | c.3822C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 767206 | c.3837C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 767209 | c.3840T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoC | 767212 | c.3843G>C | synonymous_variant | 1.0 | rifampicin | |
rpsL | 781628 | c.69T>C | synonymous_variant | 1.0 | streptomycin | Not assoc w R - Interim |
rpsL | 781649 | c.90T>C | synonymous_variant | 1.0 | streptomycin | |
rpsL | 781655 | c.96T>C | synonymous_variant | 1.0 | streptomycin | |
rpsL | 781658 | c.99A>G | synonymous_variant | 1.0 | streptomycin | |
rpsL | 781703 | c.144G>T | synonymous_variant | 1.0 | streptomycin | |
rpsL | 781721 | c.162C>T | synonymous_variant | 1.0 | streptomycin | |
rpsL | 781728 | c.169T>C | synonymous_variant | 1.0 | streptomycin | |
rpsL | 781742 | c.183C>T | synonymous_variant | 1.0 | streptomycin | |
rpsL | 781751 | c.192G>C | synonymous_variant | 1.0 | streptomycin | |
rpsL | 781754 | c.195G>C | synonymous_variant | 1.0 | streptomycin | |
rpsL | 781760 | c.201T>C | synonymous_variant | 1.0 | streptomycin | |
rpsL | 781766 | c.207C>T | synonymous_variant | 1.0 | streptomycin | Not assoc w R - Interim |
rpsL | 781778 | c.219C>T | synonymous_variant | 1.0 | streptomycin | |
rpsL | 781808 | c.249C>T | synonymous_variant | 1.0 | streptomycin | |
rpsL | 781832 | c.273T>C | synonymous_variant | 1.0 | streptomycin | |
rpsL | 781865 | c.306G>C | synonymous_variant | 1.0 | streptomycin | |
rpsL | 781868 | c.309T>C | synonymous_variant | 1.0 | streptomycin | |
rpsL | 781871 | c.312G>C | synonymous_variant | 1.0 | streptomycin | |
rpsL | 781892 | c.333A>G | synonymous_variant | 1.0 | streptomycin | |
rpsL | 781898 | c.339A>T | synonymous_variant | 1.0 | streptomycin | |
rpsL | 781904 | c.345C>T | synonymous_variant | 1.0 | streptomycin | Not assoc w R - Interim |
rpsL | 781907 | c.348T>C | synonymous_variant | 1.0 | streptomycin | |
rpsL | 781916 | c.357T>G | synonymous_variant | 1.0 | streptomycin | |
rpsL | 781929 | p.Gly124Ser | missense_variant | 1.0 | streptomycin | Uncertain significance |
rplC | 800633 | c.-176T>C | upstream_gene_variant | 1.0 | linezolid | |
rplC | 800648 | c.-161A>T | upstream_gene_variant | 1.0 | linezolid | |
rplC | 800690 | c.-119C>G | upstream_gene_variant | 1.0 | linezolid | |
rplC | 800703 | c.-106_-104delTTGinsCC | upstream_gene_variant | 1.0 | linezolid | |
rplC | 800715 | c.-94A>C | upstream_gene_variant | 1.0 | linezolid | |
rplC | 800720 | c.-89T>C | upstream_gene_variant | 1.0 | linezolid | |
rplC | 800723 | c.-86C>G | upstream_gene_variant | 1.0 | linezolid | |
rplC | 800747 | c.-62C>G | upstream_gene_variant | 1.0 | linezolid | |
rplC | 800759 | c.-50C>T | upstream_gene_variant | 1.0 | linezolid | |
rplC | 800771 | c.-38C>T | upstream_gene_variant | 1.0 | linezolid | |
rplC | 800796 | c.-13A>C | upstream_gene_variant | 1.0 | linezolid | |
rplC | 800801 | c.-8A>G | upstream_gene_variant | 1.0 | linezolid | |
rplC | 800802 | c.-6_-5delAG | upstream_gene_variant | 1.0 | linezolid | |
rplC | 800814 | c.6A>G | synonymous_variant | 1.0 | linezolid | |
rplC | 800815 | c.7C>A | synonymous_variant | 1.0 | linezolid | |
rplC | 800820 | c.12G>A | synonymous_variant | 1.0 | linezolid | |
rplC | 800829 | c.21C>G | synonymous_variant | 1.0 | linezolid | |
rplC | 800844 | c.36T>C | synonymous_variant | 1.0 | linezolid | |
rplC | 800865 | c.57A>G | synonymous_variant | 1.0 | linezolid | |
rplC | 800867 | p.Ser20Asn | missense_variant | 1.0 | linezolid | |
rplC | 800877 | c.69A>C | synonymous_variant | 1.0 | linezolid | |
rplC | 800880 | c.72A>G | synonymous_variant | 1.0 | linezolid | |
fbiC | 1303713 | c.783C>G | synonymous_variant | 1.0 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303722 | c.792C>T | synonymous_variant | 1.0 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303740 | c.810C>G | synonymous_variant | 1.0 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303746 | c.816T>C | synonymous_variant | 1.0 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303752 | c.822A>G | synonymous_variant | 1.0 | clofazimine | Not assoc w R - Interim |
pretomanid | ||||||
delamanid | Not assoc w R - Interim | |||||
fbiC | 1303755 | c.825T>C | synonymous_variant | 1.0 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303785 | c.855G>C | synonymous_variant | 1.0 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303791 | c.861C>T | synonymous_variant | 1.0 | clofazimine | Not assoc w R - Interim |
pretomanid | ||||||
delamanid | Not assoc w R - Interim | |||||
fbiC | 1303794 | c.864A>G | synonymous_variant | 1.0 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303818 | c.888C>G | synonymous_variant | 1.0 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
fbiC | 1303844 | p.Ala305Asp | missense_variant | 1.0 | clofazimine | |
pretomanid | ||||||
delamanid | ||||||
sigE | 1364691 | c.279T>C | synonymous_variant | 1.0 | pyrazinamide | |
sigE | 1364709 | c.297T>A | synonymous_variant | 1.0 | pyrazinamide | |
sigE | 1364712 | c.300T>C | synonymous_variant | 1.0 | pyrazinamide | |
sigE | 1364715 | c.303G>T | synonymous_variant | 1.0 | pyrazinamide | |
sigE | 1364721 | c.309C>G | synonymous_variant | 1.0 | pyrazinamide | |
sigE | 1364736 | c.324T>C | synonymous_variant | 1.0 | pyrazinamide | Not assoc w R - Interim |
sigE | 1364742 | c.330A>G | synonymous_variant | 1.0 | pyrazinamide | |
sigE | 1364751 | c.339C>G | synonymous_variant | 1.0 | pyrazinamide | |
sigE | 1364760 | c.348C>G | synonymous_variant | 1.0 | pyrazinamide | |
sigE | 1364763 | c.351T>C | synonymous_variant | 1.0 | pyrazinamide | |
sigE | 1364796 | c.384G>A | synonymous_variant | 1.0 | pyrazinamide | |
sigE | 1364805 | c.393C>T | synonymous_variant | 1.0 | pyrazinamide | |
sigE | 1364811 | c.399A>G | synonymous_variant | 1.0 | pyrazinamide | |
sigE | 1364820 | c.408A>G | synonymous_variant | 1.0 | pyrazinamide | |
atpE | 1461149 | c.105T>G | synonymous_variant | 1.0 | bedaquiline | |
atpE | 1461164 | c.120C>T | synonymous_variant | 1.0 | bedaquiline | |
atpE | 1461167 | c.123G>C | synonymous_variant | 1.0 | bedaquiline | |
atpE | 1461170 | c.126A>G | synonymous_variant | 1.0 | bedaquiline | |
atpE | 1461179 | c.135G>A | synonymous_variant | 1.0 | bedaquiline | |
atpE | 1461182 | c.138A>G | synonymous_variant | 1.0 | bedaquiline | |
atpE | 1461185 | c.141G>C | synonymous_variant | 1.0 | bedaquiline | |
atpE | 1461188 | c.144G>T | synonymous_variant | 1.0 | bedaquiline | |
atpE | 1461191 | c.147G>C | synonymous_variant | 1.0 | bedaquiline | |
atpE | 1461197 | c.153A>C | synonymous_variant | 1.0 | bedaquiline | |
atpE | 1461212 | c.168C>G | synonymous_variant | 1.0 | bedaquiline | |
atpE | 1461219 | c.175T>C | synonymous_variant | 1.0 | bedaquiline | |
rrs | 1471918 | n.73A>T | non_coding_transcript_exon_variant | 1.0 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1471922 | n.78delT | non_coding_transcript_exon_variant | 1.0 | streptomycin | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
rrs | 1471925 | n.80T>C | non_coding_transcript_exon_variant | 1.0 | streptomycin | |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1471931 | n.87delA | non_coding_transcript_exon_variant | 1.0 | streptomycin | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
rrs | 1471934 | n.89A>G | non_coding_transcript_exon_variant | 1.0 | streptomycin | Uncertain significance |
kanamycin | ||||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1471938 | n.93T>A | non_coding_transcript_exon_variant | 1.0 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1471970 | n.125G>A | non_coding_transcript_exon_variant | 1.0 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1471984 | n.139T>A | non_coding_transcript_exon_variant | 1.0 | streptomycin | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
rrs | 1472019 | n.174G>A | non_coding_transcript_exon_variant | 1.0 | streptomycin | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
rrs | 1472030 | n.185G>A | non_coding_transcript_exon_variant | 1.0 | streptomycin | |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472034 | n.189T>C | non_coding_transcript_exon_variant | 1.0 | streptomycin | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
rrs | 1472042 | n.197T>C | non_coding_transcript_exon_variant | 1.0 | streptomycin | |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472053 | n.211_212delGC | non_coding_transcript_exon_variant | 1.0 | streptomycin | |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472061 | n.216A>T | non_coding_transcript_exon_variant | 1.0 | streptomycin | |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472075 | n.230A>G | non_coding_transcript_exon_variant | 1.0 | streptomycin | |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472108 | n.263C>T | non_coding_transcript_exon_variant | 0.98 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472225 | n.380C>A | non_coding_transcript_exon_variant | 0.98 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Not assoc w R | |||||
amikacin | Uncertain significance | |||||
rrs | 1472314 | n.469A>G | non_coding_transcript_exon_variant | 1.0 | streptomycin | |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472315 | n.470T>C | non_coding_transcript_exon_variant | 1.0 | streptomycin | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
rrs | 1472489 | n.644A>T | non_coding_transcript_exon_variant | 1.0 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472755 | n.910G>A | non_coding_transcript_exon_variant | 0.99 | streptomycin | |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472847 | n.1002G>C | non_coding_transcript_exon_variant | 1.0 | streptomycin | |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472848 | n.1003T>G | non_coding_transcript_exon_variant | 1.0 | streptomycin | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
rrs | 1472849 | n.1004C>G | non_coding_transcript_exon_variant | 1.0 | streptomycin | |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472850 | n.1005T>C | non_coding_transcript_exon_variant | 1.0 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472857 | n.1012A>G | non_coding_transcript_exon_variant | 1.0 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472858 | n.1013G>T | non_coding_transcript_exon_variant | 1.0 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472859 | n.1014G>C | non_coding_transcript_exon_variant | 1.0 | streptomycin | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
rrs | 1472860 | n.1015C>G | non_coding_transcript_exon_variant | 1.0 | streptomycin | |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472969 | n.1124A>G | non_coding_transcript_exon_variant | 1.0 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472970 | n.1125C>G | non_coding_transcript_exon_variant | 1.0 | streptomycin | |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472977 | n.1132G>C | non_coding_transcript_exon_variant | 1.0 | streptomycin | |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472978 | n.1133T>C | non_coding_transcript_exon_variant | 1.0 | streptomycin | Uncertain significance |
kanamycin | Uncertain significance | |||||
capreomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1473123 | n.1278delAinsTT | non_coding_transcript_exon_variant | 1.0 | streptomycin | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
rrs | 1473290 | n.1445delCinsTT | non_coding_transcript_exon_variant | 1.0 | streptomycin | |
kanamycin | ||||||
capreomycin | ||||||
amikacin | ||||||
rrl | 1473592 | n.-66_-65insAA | upstream_gene_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1473597 | n.-61G>T | upstream_gene_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1473600 | n.-58A>G | upstream_gene_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1473603 | n.-55C>T | upstream_gene_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1473606 | n.-52C>T | upstream_gene_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1473609 | n.-49_-48delGCinsT | upstream_gene_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1473612 | n.-46A>C | upstream_gene_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1473617 | n.-41T>C | upstream_gene_variant | 1.0 | capreomycin | |
linezolid | Uncertain significance | |||||
rrl | 1473618 | n.-40G>A | upstream_gene_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1473619 | n.-39G>A | upstream_gene_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1473626 | n.-32_-31insTT | upstream_gene_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1473635 | n.-23_-22insTTTT | upstream_gene_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1473653 | n.-5T>A | upstream_gene_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1473758 | n.101G>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1473797 | n.140G>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1473806 | n.149C>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1473813 | n.156C>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1473814 | n.157A>G | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1473815 | n.158T>C | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1473831 | n.174G>A | non_coding_transcript_exon_variant | 0.98 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1473839 | n.182G>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1473876 | n.219G>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1473899 | n.242A>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1473923 | n.266C>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | Uncertain significance | |||||
rrl | 1473937 | n.280C>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1473943 | n.286G>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1473945 | n.288T>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1473946 | n.289A>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1473980 | n.324_327delGGAT | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1473987 | n.330_331insATCT | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1473995 | n.338G>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1474001 | n.344C>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Not assoc w R |
linezolid | Not assoc w R | |||||
rrl | 1474007 | n.350A>G | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1474016 | n.359C>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1474018 | n.361G>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1474029 | n.372G>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1474051 | n.394T>C | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1474061 | n.404T>C | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1474090 | n.433C>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1474093 | n.436G>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1474103 | n.446A>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1474104 | n.448delT | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1474111 | n.454_455insC | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1474127 | n.470G>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1474139 | n.482C>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1474140 | n.483C>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474151 | n.494C>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474181 | n.524C>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1474266 | n.609T>C | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474291 | n.634_649delTTTCCTCTCCGGAGGAinsC | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1474308 | n.651G>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474310 | n.653T>G | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1474362 | n.705A>G | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474412 | n.756_768delACCCACACGCGCA | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1474428 | n.771C>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1474429 | n.772G>C | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1474431 | n.774G>C | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1474434 | n.777_778insAAGGG | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1474437 | n.781_782delAA | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1474447 | n.790G>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1474639 | n.982G>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474716 | n.1059A>C | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1474794 | n.1137C>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474812 | n.1155G>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474831 | n.1174A>G | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1474957 | n.1300C>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1474959 | n.1303_1305delCTT | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1474965 | n.1308_1311delGGTGinsAAGTA | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1475006 | n.1349A>G | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1475007 | n.1350C>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1475013 | n.1356G>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1475018 | n.1361G>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1475019 | n.1362T>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1475028 | n.1371G>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1475061 | n.1404C>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475062 | n.1405A>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475202 | n.1545G>C | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475337 | n.1680C>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475355 | n.1698C>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475369 | n.1712G>C | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1475402 | n.1745C>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1475403 | n.1746T>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1475404 | n.1747A>C | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1475429 | n.1772G>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475443 | n.1786G>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475479 | n.1822C>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475480 | n.1823A>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475505 | n.1848G>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475526 | n.1869C>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475573 | n.1916G>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475599 | n.1942A>G | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | Uncertain significance | |||||
rrl | 1475604 | n.1947A>C | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475606 | n.1949T>C | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475619 | n.1962C>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1475622 | n.1965G>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1475635 | n.1978G>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1475637 | n.1980T>G | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475659 | n.2002G>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475760 | n.2103C>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1475763 | n.2106C>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475975 | n.2318C>T | non_coding_transcript_exon_variant | 0.99 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475977 | n.2320A>G | non_coding_transcript_exon_variant | 0.99 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475988 | n.2331A>T | non_coding_transcript_exon_variant | 0.98 | capreomycin | |
linezolid | ||||||
rrl | 1476040 | n.2383C>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1476046 | n.2389G>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1476049 | n.2392C>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476086 | n.2429G>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476089 | n.2432T>C | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1476095 | n.2438C>G | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1476103 | n.2446C>G | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476105 | n.2448G>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476106 | n.2449A>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476110 | n.2453G>C | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476115 | n.2458T>C | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476117 | n.2460G>C | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1476131 | n.2474C>T | non_coding_transcript_exon_variant | 0.98 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476214 | n.2557G>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476215 | n.2558C>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476297 | n.2640C>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476299 | n.2642C>T | non_coding_transcript_exon_variant | 0.98 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476580 | n.2923G>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1476597 | n.2940G>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476608 | n.2951C>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476619 | n.2962C>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Not assoc w R |
linezolid | Uncertain significance | |||||
rrl | 1476628 | n.2971T>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476689 | n.3032A>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1476692 | n.3035T>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1476695 | n.3038T>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1476710 | n.3053C>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1476720 | n.3063G>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1476723 | n.3066T>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1476725 | n.3068C>T | non_coding_transcript_exon_variant | 1.0 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476726 | n.3069A>G | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1476732 | n.3075T>C | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
rrl | 1476755 | n.3098G>A | non_coding_transcript_exon_variant | 1.0 | capreomycin | |
linezolid | ||||||
inhA | 1673685 | c.-517C>T | upstream_gene_variant | 1.0 | ethionamide | |
isoniazid | ||||||
inhA | 1674542 | p.Ala114Glu | missense_variant | 1.0 | ethionamide | |
isoniazid | ||||||
inhA | 1674546 | c.345T>C | synonymous_variant | 1.0 | ethionamide | |
isoniazid | ||||||
inhA | 1674555 | c.354G>A | synonymous_variant | 1.0 | ethionamide | Not assoc w R - Interim |
isoniazid | Not assoc w R - Interim | |||||
inhA | 1674573 | c.372G>C | synonymous_variant | 1.0 | ethionamide | |
isoniazid | ||||||
inhA | 1674576 | c.375T>C | synonymous_variant | 1.0 | ethionamide | |
isoniazid | ||||||
inhA | 1674582 | c.381T>C | synonymous_variant | 1.0 | ethionamide | |
isoniazid | ||||||
inhA | 1674585 | c.384T>C | synonymous_variant | 1.0 | ethionamide | |
isoniazid | ||||||
inhA | 1674588 | c.387G>C | synonymous_variant | 1.0 | ethionamide | |
isoniazid | ||||||
inhA | 1674589 | p.Met130Leu | missense_variant | 1.0 | ethionamide | |
isoniazid | ||||||
inhA | 1674594 | c.393C>A | synonymous_variant | 1.0 | ethionamide | |
isoniazid | ||||||
inhA | 1674597 | c.396G>A | synonymous_variant | 1.0 | ethionamide | |
isoniazid | ||||||
inhA | 1674600 | c.399G>A | synonymous_variant | 1.0 | ethionamide | |
isoniazid | ||||||
inhA | 1674601 | c.400C>T | synonymous_variant | 1.0 | ethionamide | |
isoniazid | ||||||
inhA | 1674618 | c.417C>T | synonymous_variant | 1.0 | ethionamide | |
isoniazid | ||||||
inhA | 1674624 | c.423A>C | synonymous_variant | 1.0 | ethionamide | |
isoniazid | ||||||
inhA | 1674627 | c.426T>C | synonymous_variant | 1.0 | ethionamide | |
isoniazid | ||||||
inhA | 1674628 | p.Ser143Gly | missense_variant | 1.0 | ethionamide | |
isoniazid | ||||||
inhA | 1674654 | c.453G>C | synonymous_variant | 1.0 | ethionamide | |
isoniazid | ||||||
inhA | 1674656 | p.Ser152Thr | missense_variant | 1.0 | ethionamide | |
isoniazid | ||||||
inhA | 1674660 | c.459G>C | synonymous_variant | 1.0 | ethionamide | |
isoniazid | ||||||
inhA | 1674904 | c.703_705delGCGinsCC | frameshift_variant&missense_variant | 1.0 | ethionamide | |
isoniazid | ||||||
inhA | 1674909 | c.708G>T | synonymous_variant | 1.0 | ethionamide | |
isoniazid | ||||||
inhA | 1674942 | c.741T>C | synonymous_variant | 1.0 | ethionamide | |
isoniazid | ||||||
inhA | 1674945 | p.Asp248Glu | missense_variant | 1.0 | ethionamide | |
isoniazid | ||||||
inhA | 1674954 | c.753G>C | synonymous_variant | 1.0 | ethionamide | |
isoniazid | ||||||
inhA | 1674960 | c.759C>G | synonymous_variant | 1.0 | ethionamide | |
isoniazid | ||||||
inhA | 1674963 | c.762G>C | synonymous_variant | 1.0 | ethionamide | |
isoniazid | ||||||
inhA | 1674984 | c.783C>T | synonymous_variant | 1.0 | ethionamide | Not assoc w R - Interim |
isoniazid | Not assoc w R - Interim | |||||
inhA | 1674987 | c.786C>T | synonymous_variant | 1.0 | ethionamide | |
isoniazid | ||||||
inhA | 1674993 | c.792G>T | synonymous_variant | 1.0 | ethionamide | |
isoniazid | ||||||
inhA | 1674999 | c.798C>T | synonymous_variant | 1.0 | ethionamide | |
isoniazid | ||||||
inhA | 1675005 | c.804G>A | synonymous_variant | 1.0 | ethionamide | |
isoniazid | ||||||
rpsA | 1833661 | c.120A>G | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1833664 | c.123C>A | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1833724 | c.183C>G | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1833727 | c.186G>C | synonymous_variant | 0.91 | pyrazinamide | |
rpsA | 1833802 | c.261A>G | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1833811 | c.270G>T | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1833820 | c.279G>A | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1833856 | c.315A>G | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1833859 | c.318C>T | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1833874 | c.333T>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1833893 | p.Ala118Lys | missense_variant | 1.0 | pyrazinamide | |
rpsA | 1833928 | c.387G>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1833931 | c.390C>G | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1833940 | c.399C>G | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1833970 | c.429G>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1833971 | c.430C>T | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1833979 | c.438T>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834123 | c.582C>G | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834150 | c.609G>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834153 | c.612T>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834154 | c.613_615delAACinsCG | frameshift_variant&missense_variant | 1.0 | pyrazinamide | Uncertain significance |
rpsA | 1834157 | c.616T>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834162 | c.621A>G | synonymous_variant | 1.0 | pyrazinamide | Not assoc w R - Interim |
rpsA | 1834165 | c.624A>G | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834177 | c.636A>C | synonymous_variant | 1.0 | pyrazinamide | Not assoc w R - Interim |
rpsA | 1834189 | c.648G>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834195 | c.654G>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834222 | c.681T>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834297 | c.756C>G | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834303 | c.762T>G | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834306 | c.765T>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834348 | c.807T>C | synonymous_variant | 1.0 | pyrazinamide | Not assoc w R - Interim |
rpsA | 1834366 | c.825A>G | synonymous_variant | 1.0 | pyrazinamide | Not assoc w R - Interim |
rpsA | 1834369 | c.828C>G | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834396 | c.855G>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834411 | c.870T>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834451 | c.910T>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834456 | c.915T>G | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834459 | c.918G>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834468 | c.927A>G | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834477 | c.936C>A | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834489 | c.948T>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834499 | c.958C>T | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834507 | c.966C>T | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834528 | c.987T>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834534 | c.993C>G | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834546 | c.1005T>C | synonymous_variant | 1.0 | pyrazinamide | |
rpsA | 1834555 | c.1014T>C | synonymous_variant | 1.0 | pyrazinamide | |
kasA | 2517941 | c.-174C>G | upstream_gene_variant | 1.0 | isoniazid | |
kasA | 2517950 | c.-165C>G | upstream_gene_variant | 1.0 | isoniazid | |
kasA | 2518219 | c.105T>C | synonymous_variant | 1.0 | isoniazid | |
kasA | 2518220 | c.106C>T | synonymous_variant | 1.0 | isoniazid | |
kasA | 2518234 | c.120G>A | synonymous_variant | 1.0 | isoniazid | |
kasA | 2518247 | c.133_135delGCAinsAT | frameshift_variant&missense_variant | 1.0 | isoniazid | |
kasA | 2518261 | p.Glu49Asp | missense_variant | 1.0 | isoniazid | |
kasA | 2518268 | p.Thr52Ser | missense_variant | 1.0 | isoniazid | |
kasA | 2518273 | c.159G>A | synonymous_variant | 1.0 | isoniazid | |
kasA | 2518279 | c.165T>C | synonymous_variant | 1.0 | isoniazid | |
kasA | 2518282 | c.168A>G | synonymous_variant | 1.0 | isoniazid | |
kasA | 2518283 | p.Ala57Pro | missense_variant | 1.0 | isoniazid | |
kasA | 2518287 | p.Val58Ala | missense_variant | 1.0 | isoniazid | |
kasA | 2518312 | p.Asp66Glu | missense_variant | 1.0 | isoniazid | |
kasA | 2518561 | c.447T>C | synonymous_variant | 1.0 | isoniazid | |
kasA | 2518585 | c.471G>A | synonymous_variant | 1.0 | isoniazid | |
kasA | 2518588 | c.474T>C | synonymous_variant | 1.0 | isoniazid | |
kasA | 2518591 | c.477G>T | synonymous_variant | 1.0 | isoniazid | |
kasA | 2518636 | c.522C>T | synonymous_variant | 1.0 | isoniazid | |
kasA | 2518645 | c.531G>C | synonymous_variant | 1.0 | isoniazid | |
kasA | 2518657 | c.543G>A | synonymous_variant | 1.0 | isoniazid | |
kasA | 2518666 | c.552G>A | synonymous_variant | 1.0 | isoniazid | |
kasA | 2518672 | c.558G>C | synonymous_variant | 1.0 | isoniazid | |
kasA | 2518678 | c.564C>T | synonymous_variant | 1.0 | isoniazid | |
kasA | 2518723 | c.609G>A | synonymous_variant | 1.0 | isoniazid | |
kasA | 2518747 | c.633C>G | synonymous_variant | 1.0 | isoniazid | |
kasA | 2518765 | c.651G>A | synonymous_variant | 1.0 | isoniazid | |
kasA | 2518768 | c.654C>G | synonymous_variant | 1.0 | isoniazid | |
kasA | 2518783 | c.669T>C | synonymous_variant | 1.0 | isoniazid | |
kasA | 2518792 | c.678C>G | synonymous_variant | 1.0 | isoniazid | |
kasA | 2518795 | c.681C>G | synonymous_variant | 1.0 | isoniazid | |
Rv2477c | 2783015 | p.Ser343Thr | missense_variant | 1.0 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783020 | c.1023G>C | synonymous_variant | 1.0 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783040 | p.Ala335Pro | missense_variant | 1.0 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783041 | c.1002C>G | synonymous_variant | 1.0 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783044 | c.999G>C | synonymous_variant | 1.0 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783047 | p.Asp332Glu | missense_variant | 1.0 | ethambutol | Uncertain significance |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | Uncertain significance | |||||
amikacin | ||||||
Rv2477c | 2783051 | p.Tyr331Phe | missense_variant | 1.0 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783059 | c.984T>C | synonymous_variant | 1.0 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783350 | c.693T>C | synonymous_variant | 1.0 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783353 | c.690T>C | synonymous_variant | 1.0 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783359 | c.684G>A | synonymous_variant | 1.0 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783365 | c.678C>T | synonymous_variant | 1.0 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783374 | c.669G>C | synonymous_variant | 1.0 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783377 | c.666C>G | synonymous_variant | 1.0 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
Rv2477c | 2783395 | c.648T>C | synonymous_variant | 1.0 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
kanamycin | ||||||
rifampicin | ||||||
amikacin | ||||||
thyX | 3067321 | c.625C>A | synonymous_variant | 1.0 | para-aminosalicylic_acid | |
thyX | 3067325 | c.621A>G | synonymous_variant | 1.0 | para-aminosalicylic_acid | |
thyX | 3067328 | c.618G>C | synonymous_variant | 1.0 | para-aminosalicylic_acid | |
thyX | 3067349 | c.597G>A | synonymous_variant | 1.0 | para-aminosalicylic_acid | |
thyX | 3067355 | c.591A>G | synonymous_variant | 1.0 | para-aminosalicylic_acid | |
thyX | 3067373 | c.573C>G | synonymous_variant | 1.0 | para-aminosalicylic_acid | |
thyX | 3067385 | c.561C>T | synonymous_variant | 1.0 | para-aminosalicylic_acid | |
thyX | 3067391 | c.555G>C | synonymous_variant | 1.0 | para-aminosalicylic_acid | |
thyX | 3067394 | c.552G>C | synonymous_variant | 1.0 | para-aminosalicylic_acid | |
thyX | 3067415 | c.531C>T | synonymous_variant | 1.0 | para-aminosalicylic_acid | |
thyX | 3067423 | c.523C>T | synonymous_variant | 1.0 | para-aminosalicylic_acid | |
thyX | 3067427 | c.519G>A | synonymous_variant | 1.0 | para-aminosalicylic_acid | |
thyX | 3067439 | c.507A>G | synonymous_variant | 1.0 | para-aminosalicylic_acid | |
thyX | 3067451 | c.495G>A | synonymous_variant | 1.0 | para-aminosalicylic_acid | |
thyX | 3067463 | p.Ile161Pro | missense_variant | 1.0 | para-aminosalicylic_acid | |
thyX | 3067468 | p.Ala160Ser | missense_variant | 1.0 | para-aminosalicylic_acid | |
thyX | 3067500 | p.Lys149Arg | missense_variant | 1.0 | para-aminosalicylic_acid | |
thyX | 3067515 | p.Ser144Thr | missense_variant | 1.0 | para-aminosalicylic_acid | |
thyX | 3067544 | p.Glu134Ala | missense_variant | 0.82 | para-aminosalicylic_acid | |
thyX | 3067557 | p.His130Ala | missense_variant | 1.0 | para-aminosalicylic_acid | |
thyX | 3067565 | p.Asp127Glu | missense_variant | 1.0 | para-aminosalicylic_acid | |
thyX | 3067570 | p.Ala126Pro | missense_variant | 1.0 | para-aminosalicylic_acid | |
thyX | 3067577 | c.369G>A | synonymous_variant | 1.0 | para-aminosalicylic_acid | |
thyX | 3067580 | p.Met122Ile | missense_variant | 1.0 | para-aminosalicylic_acid | |
thyX | 3067594 | p.Val118Leu | missense_variant | 1.0 | para-aminosalicylic_acid | |
thyX | 3067595 | c.351C>G | synonymous_variant | 1.0 | para-aminosalicylic_acid | |
thyX | 3067598 | c.348C>G | synonymous_variant | 1.0 | para-aminosalicylic_acid | |
thyX | 3067602 | p.Arg115Gln | missense_variant | 1.0 | para-aminosalicylic_acid | |
thyX | 3067610 | p.Lys112Asn | missense_variant | 1.0 | para-aminosalicylic_acid | |
thyX | 3067616 | c.330C>G | synonymous_variant | 1.0 | para-aminosalicylic_acid | |
thyX | 3067619 | c.327A>G | synonymous_variant | 1.0 | para-aminosalicylic_acid | |
thyX | 3067622 | c.324C>T | synonymous_variant | 1.0 | para-aminosalicylic_acid | |
thyX | 3067625 | c.321C>G | synonymous_variant | 1.0 | para-aminosalicylic_acid | |
thyX | 3067634 | c.312C>T | synonymous_variant | 1.0 | para-aminosalicylic_acid | |
thyX | 3067646 | c.300C>T | synonymous_variant | 1.0 | para-aminosalicylic_acid | |
thyX | 3067652 | c.294T>C | synonymous_variant | 1.0 | para-aminosalicylic_acid | |
thyX | 3067661 | c.285C>G | synonymous_variant | 1.0 | para-aminosalicylic_acid | |
thyX | 3067742 | c.204A>G | synonymous_variant | 1.0 | para-aminosalicylic_acid | |
thyX | 3067814 | c.132T>C | synonymous_variant | 1.0 | para-aminosalicylic_acid | |
lpqB | 3624646 | c.265T>C | synonymous_variant | 1.0 | bedaquiline | |
rifampicin | ||||||
lpqB | 3624649 | c.262T>C | synonymous_variant | 1.0 | bedaquiline | |
rifampicin | ||||||
lpqB | 3624656 | c.255C>T | synonymous_variant | 1.0 | bedaquiline | |
rifampicin | ||||||
lpqB | 3624680 | c.231T>C | synonymous_variant | 1.0 | bedaquiline | |
rifampicin | ||||||
lpqB | 3624686 | c.223_225delGAAinsCG | frameshift_variant&missense_variant | 1.0 | bedaquiline | |
rifampicin | Uncertain significance | |||||
lpqB | 3624698 | c.213G>A | synonymous_variant | 1.0 | bedaquiline | |
rifampicin | ||||||
lpqB | 3624701 | c.210T>G | synonymous_variant | 1.0 | bedaquiline | |
rifampicin | ||||||
lpqB | 3624704 | c.207G>C | synonymous_variant | 1.0 | bedaquiline | |
rifampicin | ||||||
lpqB | 3624713 | c.198C>T | synonymous_variant | 1.0 | bedaquiline | |
rifampicin | ||||||
lpqB | 3625525 | c.-615G>C | upstream_gene_variant | 1.0 | bedaquiline | |
rifampicin | ||||||
lpqB | 3625528 | c.-618G>C | upstream_gene_variant | 1.0 | bedaquiline | |
rifampicin | ||||||
lpqB | 3625537 | c.-627T>C | upstream_gene_variant | 1.0 | bedaquiline | |
rifampicin | ||||||
lpqB | 3625543 | c.-633G>C | upstream_gene_variant | 1.0 | bedaquiline | |
rifampicin | ||||||
mtrB | 3625569 | c.1045T>C | synonymous_variant | 1.0 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
lpqB | 3625579 | c.-669A>C | upstream_gene_variant | 1.0 | bedaquiline | |
rifampicin | ||||||
lpqB | 3625588 | c.-678G>A | upstream_gene_variant | 1.0 | bedaquiline | |
rifampicin | ||||||
mtrB | 3625592 | p.Ser341Asn | missense_variant | 1.0 | bedaquiline | |
rifampicin | ||||||
lpqB | 3625594 | c.-684T>C | upstream_gene_variant | 1.0 | bedaquiline | |
rifampicin | ||||||
lpqB | 3625602 | c.-692T>C | upstream_gene_variant | 1.0 | bedaquiline | |
rifampicin | ||||||
lpqB | 3625612 | c.-702G>C | upstream_gene_variant | 1.0 | bedaquiline | |
rifampicin | ||||||
mtrB | 3625623 | p.Thr331Ala | missense_variant | 1.0 | bedaquiline | |
rifampicin | ||||||
lpqB | 3625627 | c.-717C>T | upstream_gene_variant | 1.0 | bedaquiline | |
rifampicin | ||||||
lpqB | 3625630 | c.-720C>G | upstream_gene_variant | 1.0 | bedaquiline | |
rifampicin | ||||||
mtrB | 3625638 | p.Ala326Ser | missense_variant | 1.0 | bedaquiline | |
rifampicin | ||||||
lpqB | 3625648 | c.-738T>C | upstream_gene_variant | 1.0 | bedaquiline | |
rifampicin | ||||||
mtrB | 3625912 | c.702G>C | synonymous_variant | 1.0 | bedaquiline | |
rifampicin | ||||||
mtrB | 3626029 | c.585A>G | synonymous_variant | 1.0 | bedaquiline | |
rifampicin | ||||||
mtrB | 3626035 | c.579G>C | synonymous_variant | 0.9 | bedaquiline | |
rifampicin | ||||||
mtrA | 3626741 | c.609C>G | synonymous_variant | 1.0 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
mtrB | 3626744 | c.-131G>C | upstream_gene_variant | 1.0 | bedaquiline | |
rifampicin | ||||||
mtrB | 3626750 | c.-137T>C | upstream_gene_variant | 1.0 | bedaquiline | |
rifampicin | ||||||
mtrA | 3626759 | c.591T>C | synonymous_variant | 1.0 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
mtrA | 3626774 | c.574_576delAGGinsCC | frameshift_variant&missense_variant | 1.0 | bedaquiline | |
rifampicin | ||||||
mtrB | 3626780 | c.-167T>C | upstream_gene_variant | 1.0 | bedaquiline | |
rifampicin | ||||||
mtrB | 3626783 | c.-170C>G | upstream_gene_variant | 1.0 | bedaquiline | |
rifampicin | ||||||
mtrA | 3626786 | c.564A>G | synonymous_variant | 1.0 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
mtrB | 3626798 | c.-185T>A | upstream_gene_variant | 1.0 | bedaquiline | |
rifampicin | ||||||
mtrB | 3626804 | c.-191A>C | upstream_gene_variant | 1.0 | bedaquiline | |
rifampicin | ||||||
mtrB | 3626999 | c.-386G>C | upstream_gene_variant | 1.0 | bedaquiline | |
rifampicin | ||||||
mtrB | 3627008 | c.-395G>C | upstream_gene_variant | 0.92 | bedaquiline | |
rifampicin | ||||||
mtrB | 3627011 | c.-398T>G | upstream_gene_variant | 0.92 | bedaquiline | |
rifampicin | ||||||
mtrB | 3627059 | c.-446G>C | upstream_gene_variant | 1.0 | bedaquiline | |
rifampicin | ||||||
mtrA | 3627068 | c.282T>C | synonymous_variant | 1.0 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
mtrB | 3627071 | c.-458G>C | upstream_gene_variant | 1.0 | bedaquiline | |
rifampicin | ||||||
mtrA | 3627080 | c.270T>C | synonymous_variant | 1.0 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
mtrB | 3627134 | c.-521C>T | upstream_gene_variant | 1.0 | bedaquiline | |
rifampicin | ||||||
mtrB | 3627139 | c.-526T>C | upstream_gene_variant | 1.0 | bedaquiline | |
rifampicin | ||||||
mtrA | 3627227 | c.123T>C | synonymous_variant | 1.0 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
mtrB | 3627236 | c.-623T>C | upstream_gene_variant | 1.0 | bedaquiline | |
rifampicin | ||||||
mtrA | 3627239 | c.111C>T | synonymous_variant | 1.0 | bedaquiline | Not assoc w R - Interim |
rifampicin | Not assoc w R - Interim | |||||
mtrB | 3627263 | c.-650C>T | upstream_gene_variant | 0.91 | bedaquiline | |
rifampicin | ||||||
mtrB | 3627266 | c.-653A>G | upstream_gene_variant | 0.91 | bedaquiline | |
rifampicin | ||||||
mtrB | 3627272 | c.-659G>T | upstream_gene_variant | 0.91 | bedaquiline | |
rifampicin | ||||||
mtrA | 3627277 | c.73C>T | synonymous_variant | 0.91 | bedaquiline | |
rifampicin | Not assoc w R - Interim | |||||
rpoA | 3877656 | c.852T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoA | 3877686 | c.822A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoA | 3877692 | c.816G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoA | 3877704 | c.804G>C | synonymous_variant | 1.0 | rifampicin | |
rpoA | 3877737 | c.771G>C | synonymous_variant | 1.0 | rifampicin | |
rpoA | 3877743 | c.765T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoA | 3877746 | c.762G>C | synonymous_variant | 1.0 | rifampicin | |
rpoA | 3877758 | c.750G>C | synonymous_variant | 1.0 | rifampicin | |
rpoA | 3877785 | c.723C>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoA | 3877818 | c.690A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoA | 3877848 | c.660C>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoA | 3877872 | c.636C>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoA | 3877875 | c.633T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoA | 3877881 | c.627G>C | synonymous_variant | 1.0 | rifampicin | |
rpoA | 3877893 | c.615C>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoA | 3877900 | p.Ser203Thr | missense_variant | 1.0 | rifampicin | |
rpoA | 3877905 | c.603A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoA | 3877908 | p.Asn200Ser | missense_variant | 1.0 | rifampicin | |
rpoA | 3877989 | c.519A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoA | 3878001 | c.507A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoA | 3878007 | c.501C>T | synonymous_variant | 1.0 | rifampicin | |
rpoA | 3878022 | c.486T>C | synonymous_variant | 1.0 | rifampicin | |
rpoA | 3878025 | c.483C>T | synonymous_variant | 1.0 | rifampicin | |
rpoA | 3878028 | c.480G>C | synonymous_variant | 1.0 | rifampicin | |
rpoA | 3878031 | c.477T>C | synonymous_variant | 1.0 | rifampicin | |
rpoA | 3878046 | c.462T>C | synonymous_variant | 1.0 | rifampicin | |
rpoA | 3878055 | c.453A>G | synonymous_variant | 1.0 | rifampicin | |
rpoA | 3878067 | c.441C>G | synonymous_variant | 1.0 | rifampicin | |
rpoA | 3878070 | c.438T>C | synonymous_variant | 1.0 | rifampicin | |
rpoA | 3878082 | c.426T>C | synonymous_variant | 1.0 | rifampicin | |
rpoA | 3878103 | c.405A>G | synonymous_variant | 1.0 | rifampicin | |
rpoA | 3878106 | c.402G>C | synonymous_variant | 1.0 | rifampicin | |
rpoA | 3878118 | c.390T>C | synonymous_variant | 1.0 | rifampicin | |
rpoA | 3878127 | c.381G>C | synonymous_variant | 1.0 | rifampicin | |
rpoA | 3878130 | c.378C>G | synonymous_variant | 1.0 | rifampicin | |
rpoA | 3878187 | c.321C>G | synonymous_variant | 1.0 | rifampicin | |
rpoA | 3878217 | c.291A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoA | 3878247 | c.261G>C | synonymous_variant | 1.0 | rifampicin | |
rpoA | 3878253 | c.255G>C | synonymous_variant | 1.0 | rifampicin | |
rpoA | 3878271 | c.237T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoA | 3878283 | p.Glu75Asp | missense_variant | 1.0 | rifampicin | Uncertain significance |
rpoA | 3878295 | c.213A>G | synonymous_variant | 1.0 | rifampicin | |
rpoA | 3878298 | c.210A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoA | 3878313 | c.195G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoA | 3878322 | c.186A>G | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoA | 3878331 | c.177A>C | synonymous_variant | 1.0 | rifampicin | |
rpoA | 3878334 | c.174T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoA | 3878337 | c.171T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R - Interim |
rpoA | 3878358 | c.150C>G | synonymous_variant | 1.0 | rifampicin | |
rpoA | 3878364 | c.144A>C | synonymous_variant | 1.0 | rifampicin | |
rpoA | 3878370 | c.138T>C | synonymous_variant | 1.0 | rifampicin | |
rpoA | 3878385 | c.123C>G | synonymous_variant | 1.0 | rifampicin | |
rpoA | 3878406 | c.102G>T | synonymous_variant | 1.0 | rifampicin | |
rpoA | 3878415 | c.93C>T | synonymous_variant | 1.0 | rifampicin | |
rpoA | 3878442 | c.66G>C | synonymous_variant | 1.0 | rifampicin | |
rpoA | 3878764 | c.-257A>G | upstream_gene_variant | 1.0 | rifampicin | |
rpoA | 3878767 | c.-260G>T | upstream_gene_variant | 1.0 | rifampicin | |
rpoA | 3878785 | c.-278T>C | upstream_gene_variant | 1.0 | rifampicin | |
rpoA | 3878788 | c.-281G>C | upstream_gene_variant | 1.0 | rifampicin | Uncertain significance |
rpoA | 3878797 | c.-290G>C | upstream_gene_variant | 1.0 | rifampicin | |
rpoA | 3878806 | c.-299C>A | upstream_gene_variant | 1.0 | rifampicin | |
rpoA | 3878809 | c.-302T>C | upstream_gene_variant | 1.0 | rifampicin | |
rpoA | 3878833 | c.-326C>G | upstream_gene_variant | 1.0 | rifampicin | |
rpoA | 3878853 | c.-346G>A | upstream_gene_variant | 1.0 | rifampicin | |
clpC1 | 4038368 | c.2337T>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038388 | c.2317T>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038436 | p.Ala757Ser | missense_variant | 1.0 | pyrazinamide | |
clpC1 | 4038623 | c.2082A>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038645 | p.Glu687Ala | missense_variant | 1.0 | pyrazinamide | |
clpC1 | 4038647 | c.2058T>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038650 | c.2055C>T | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038653 | c.2052C>T | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038658 | p.Lys683Gln | missense_variant | 1.0 | pyrazinamide | |
clpC1 | 4038661 | p.Ser682Thr | missense_variant | 1.0 | pyrazinamide | |
clpC1 | 4038662 | c.2043T>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038674 | c.2031C>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038683 | c.2022T>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038695 | c.2010C>A | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038704 | c.2001T>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038707 | c.1998C>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038713 | c.1992T>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038740 | c.1965G>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038749 | c.1956C>T | synonymous_variant | 1.0 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4038755 | c.1950G>A | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038761 | c.1944C>T | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038773 | c.1932T>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038790 | c.1915C>T | synonymous_variant | 1.0 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4038812 | c.1893T>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038815 | c.1890G>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038838 | c.1867C>T | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038839 | c.1866G>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038845 | c.1860G>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038884 | c.1821C>T | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038890 | c.1815G>A | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038941 | c.1764G>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038953 | c.1752A>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038956 | c.1749T>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038965 | c.1740T>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038971 | c.1734T>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038974 | c.1731T>C | synonymous_variant | 1.0 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4038986 | c.1719C>T | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038989 | c.1716T>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4038997 | c.1708T>C | synonymous_variant | 1.0 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4039010 | c.1695G>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039076 | c.1629G>A | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039097 | c.1608G>T | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039103 | c.1602T>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039106 | c.1599G>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039112 | c.1593C>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039121 | c.1584T>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039124 | c.1581C>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039140 | p.Glu522Val | missense_variant | 1.0 | pyrazinamide | |
clpC1 | 4039142 | c.1563A>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039145 | c.1560G>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039166 | c.1539G>A | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039169 | p.Glu512Asp | missense_variant | 1.0 | pyrazinamide | |
clpC1 | 4039172 | c.1533A>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039178 | c.1527G>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039183 | c.1522T>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039187 | c.1518G>T | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039190 | c.1515C>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039226 | c.1479T>C | synonymous_variant | 1.0 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4039352 | c.1353C>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039430 | c.1275T>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039439 | c.1266C>T | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039442 | c.1263A>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039463 | c.1242C>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039466 | c.1239T>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039469 | c.1236T>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039481 | c.1224T>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039484 | c.1221T>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039487 | c.1218G>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039586 | c.1119G>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039601 | c.1104G>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039610 | c.1095G>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039616 | c.1089G>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039661 | c.1044T>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039691 | c.1014G>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039724 | c.981A>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039733 | c.972G>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039817 | c.888A>T | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039820 | c.885T>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039831 | c.874T>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039832 | c.873C>G | synonymous_variant | 0.93 | pyrazinamide | |
clpC1 | 4039850 | c.855T>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039865 | c.840T>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039931 | c.774T>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039937 | c.768G>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039952 | c.753T>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039958 | c.747G>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4039985 | c.720G>A | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4040009 | c.696C>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4040015 | c.690G>T | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4040018 | c.687G>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4040030 | c.675C>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4040033 | c.672G>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4040090 | c.615T>C | synonymous_variant | 1.0 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040093 | c.612C>G | synonymous_variant | 1.0 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040108 | c.597G>T | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4040126 | c.579C>T | synonymous_variant | 1.0 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040159 | c.546G>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4040168 | c.537G>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4040246 | c.459C>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4040267 | c.438A>G | synonymous_variant | 1.0 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040273 | c.432T>C | synonymous_variant | 1.0 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040277 | c.427_428delTCinsAG | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4040279 | c.426C>G | synonymous_variant | 1.0 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040315 | c.390G>A | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4040380 | c.325T>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4040381 | c.324T>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4040387 | c.318A>G | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4040393 | c.312G>C | synonymous_variant | 1.0 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040408 | c.297C>T | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4040411 | c.294T>C | synonymous_variant | 1.0 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040419 | c.286C>T | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4040420 | c.285G>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4040431 | c.274T>C | synonymous_variant | 1.0 | pyrazinamide | |
clpC1 | 4040522 | c.183T>C | synonymous_variant | 1.0 | pyrazinamide | Not assoc w R - Interim |
glpK | 4138429 | c.1327T>C | synonymous_variant | 1.0 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
rifampicin | ||||||
isoniazid | ||||||
glpK | 4138726 | p.Ala344Ser | missense_variant | 1.0 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
rifampicin | ||||||
isoniazid | ||||||
glpK | 4138751 | c.1005T>C | synonymous_variant | 1.0 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
rifampicin | ||||||
isoniazid | ||||||
glpK | 4139588 | c.168G>C | synonymous_variant | 1.0 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
rifampicin | ||||||
isoniazid | ||||||
glpK | 4139603 | c.153C>G | synonymous_variant | 1.0 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
rifampicin | ||||||
isoniazid | ||||||
glpK | 4139609 | c.147C>A | synonymous_variant | 1.0 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
rifampicin | ||||||
isoniazid | ||||||
glpK | 4139615 | p.Glu47Asp | missense_variant | 1.0 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
rifampicin | ||||||
isoniazid | ||||||
glpK | 4139627 | c.129G>A | synonymous_variant | 1.0 | ethambutol | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
streptomycin | ||||||
levofloxacin | Not assoc w R - Interim | |||||
rifampicin | Not assoc w R - Interim | |||||
isoniazid | Not assoc w R - Interim | |||||
glpK | 4139630 | c.126C>T | synonymous_variant | 1.0 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
rifampicin | ||||||
isoniazid | ||||||
glpK | 4139633 | c.123C>T | synonymous_variant | 1.0 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
rifampicin | ||||||
isoniazid | ||||||
glpK | 4139648 | c.108T>C | synonymous_variant | 1.0 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
rifampicin | ||||||
isoniazid | ||||||
glpK | 4139652 | p.His35Gly | missense_variant | 1.0 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
rifampicin | ||||||
isoniazid | ||||||
glpK | 4139678 | c.78C>T | synonymous_variant | 1.0 | ethambutol | |
moxifloxacin | ||||||
streptomycin | ||||||
levofloxacin | ||||||
rifampicin | ||||||
isoniazid | ||||||
embC | 4240852 | c.990G>A | synonymous_variant | 1.0 | ethambutol | |
embC | 4240859 | p.Leu333Met | missense_variant | 1.0 | ethambutol | |
embC | 4241101 | c.1239G>T | synonymous_variant | 1.0 | ethambutol | |
embC | 4241107 | c.1245G>C | synonymous_variant | 1.0 | ethambutol | |
embC | 4241119 | c.1257C>G | synonymous_variant | 1.0 | ethambutol | |
embC | 4241129 | c.1267C>T | synonymous_variant | 1.0 | ethambutol | |
embC | 4241140 | c.1278A>C | synonymous_variant | 1.0 | ethambutol | |
embC | 4241141 | p.Ile427Ala | missense_variant | 1.0 | ethambutol | |
embC | 4241146 | c.1284C>G | synonymous_variant | 1.0 | ethambutol | |
embC | 4241161 | c.1299C>A | synonymous_variant | 1.0 | ethambutol | |
embA | 4244771 | c.1539G>C | synonymous_variant | 1.0 | ethambutol | |
embA | 4244778 | c.1546_1548delTCCinsGG | frameshift_variant&missense_variant | 1.0 | ethambutol | Uncertain significance |