EBG00000313339 - n.156C>T


Drug resistance types
23 Sensitive 21 RR-TB 63 HR-TB 51 MDR-TB 3 Pre-XDR-TB 3 XDR-TB 81 Other
lineage Counts
lineage Count
lineage4.9;lineage9 2
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
La1;lineage4.9 2
lineage2.1;lineage4.9 4
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.8 2
M.canetti;lineage2.1;lineage4.9 18
lineage3 6
lineage4.4.1.1 3
lineage1.2.2.2 2
lineage4.9 43
La1;lineage4.1.2 1
La3;M.canetti;lineage2.1;lineage4.9 12
M.canetti;lineage4.9 1
La1.7;lineage4.9 2
lineage4.3.3 3
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage1.2.1.2.1 1
lineage2.1;lineage2.2;lineage6.3 1
lineage4.1.2.1 14
lineage2.2.1 12
lineage2.2.1.1 4
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
lineage1.1 1
M.canetti;lineage2.1 1
M.canetti;lineage2.1;lineage3 1
4
La3;lineage4.9 5
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 3
M.canetti;lineage2.2 3
La1.7.1 1
La3;M.canetti;lineage4.8;lineage4.9 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La3;M.canetti;lineage4.9 2
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
lineage4.3.4.2.1 2
M.canetti;lineage2.1;lineage4 1
lineage4.1.1.3 5
M.canetti;lineage2.2.2;lineage6.2 2
La3;M.canetti;lineage2.1;lineage3.1 1
La2;lineage4.9 1
lineage4.6.2.2 2
La1.8.1 2
M.canetti;lineage2.1;lineage4.9;lineage6.3 5
lineage3.1.2.1 1
La1.2 1
lineage4.9;lineage6.3 3
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
lineage5.2 2
lineage4.2;lineage4.9 2
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
lineage3.1;lineage9 1
La1.7 1
M.canetti;lineage4.2;lineage4.9 1
lineage4.6.4 2
lineage2.2 1
lineage2.1;lineage4.3.2 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 1
La1.6;La3;lineage4.6.4;lineage4.9 1
La1.6;La3;lineage4.9 1
lineage4.1;lineage4.8 2
La1;lineage2;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.2.1 1
La2;lineage4.9;lineage9 1
lineage4.2.1 1
lineage4.5 1
M.canetti;lineage2.1;lineage6.3 1
lineage4.1.2.1.1 1
lineage4.4.1.2 1
lineage4.2;lineage4.8.1;lineage4.9 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage1.1.2 1
La3;M.canetti;lineage3.1 1
lineage4.6.3;lineage4.9 2
lineage4.3.2;lineage4.9 1
lineage4.2;lineage4.6.3;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 1
La1.7;lineage4.9;lineage6 1
lineage2.1;lineage4.9;lineage6.3 1
lineage3.1.2.1;lineage3.1.2.2 1
La3;lineage2.1;lineage4.9 1
lineage4.2;lineage4.6.3;lineage4.9.1 1
lineage4.9.1 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage3.1.2.2 1
spoligotype Counts
spoligotype Count
None 245
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR10808805 Other La1;lineage4.9 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR9786619 Sensitive lineage4.8 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2446144 Other lineage3 nl
SRR1173767 MDR-TB lineage4.4.1.1 None
SRR16058433 Sensitive lineage1.2.2.2 None
ERR473332 Other lineage4.9 None
SRR9970978 Sensitive La1;lineage4.1.2 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR176751 Other lineage4.9 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
SRR6831950 Sensitive lineage4.3.3 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
SRR1510066 RR-TB lineage1.2.1.2.1 None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
ERR9786656 Sensitive lineage4.1.2.1 None
ERR7821163 Other lineage2.2.1 None
SRR1180147 Other lineage2.2.1.1 None
SRR1183144 Other lineage2.2.1 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
ERR323041 HR-TB M.canetti;lineage2.1 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
SRR1165584 Other lineage4.1.2.1 None
ERR9786843 Other None
ERR11252612 Other La3;lineage4.9 None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR29126406 RR-TB lineage2.2.1 None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR13861326 Other lineage4.9 None
SRR7240492 HR-TB La1.7.1 None
ERR2446118 Other lineage4.1.2.1 nl
SRR1640750 Other None
ERR3275196 Other lineage2.2.1 nl
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR1180137 Other lineage2.2.1 None
ERR13285304 Other lineage4.9 None
ERR3468607 Other lineage4.9 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR29097026 Other lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
SRR3675507 Other lineage4.9 None
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR2199988 MDR-TB lineage4.1.1.3 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR550636 MDR-TB lineage4.1.1.3 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675482 Other lineage4.9 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3797083 RR-TB lineage4.9 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR323039 HR-TB La2;lineage4.9 None
ERR2693228 RR-TB lineage4.9 None
ERR13292526 Other lineage4.9 None
ERR176518 Sensitive lineage4.3.4.2.1 None
ERR736856 Sensitive lineage4.9 None
ERR4821655 HR-TB lineage4.9 None
SRR3675389 Other lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
ERR5917710 Other lineage4.1.2.1 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4872119 MDR-TB lineage4.6.2.2 None
SRR10808399 Sensitive lineage4.9 None
SRR1791696 Other La1.8.1 None
SRR29096150 Other lineage4.9 None
ERR2229143 RR-TB lineage4.9 None
SRR3675515 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2517489 Sensitive lineage4.1.2.1 nl
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1181091 Other lineage2.2.1.1 None
ERR176643 Other La3;lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR3275215 RR-TB lineage4.1.2.1 nl
SRR1180172 Other lineage2.2.1 None
SRR6045158 Other lineage4.9 None
ERR11465905 Sensitive lineage4.4.1.1 None
SRR1165423 RR-TB lineage4.1.2.1 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6046259 Sensitive lineage4.9 None
ERR4800102 Sensitive lineage3.1.2.1 None
SRR13861332 Other lineage4.9 None
SRR23961549 Other La1.2 None
ERR5908228 RR-TB lineage4.3.3 None
SRR6046225 Other lineage4.9;lineage6.3 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4816151 Sensitive lineage4.8 None
ERR9119096 RR-TB lineage4.3.3 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR212001 HR-TB None
ERR2517528 RR-TB lineage3 nl
ERR9119483 Pre-XDR-TB lineage5.2 None
SRR1162864 Other lineage4.1.2.1 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
SRR1181289 Other lineage2.2.1 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR1167384 Other La3;lineage4.9 None
ERR867544 Other lineage4.9 None
ERR2693252 Sensitive lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR18289200 Other lineage4.9 None
SRR29096410 Other lineage4.9 None
ERR3797023 HR-TB La1.8.1 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675222 Other La1.7 None
SRR1165506 Other lineage4.1.2.1 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4872102 MDR-TB lineage4.6.4 None
SRR3675506 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1183049 RR-TB lineage2.2 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
ERR550637 MDR-TB lineage4.1.1.3 None
ERR8665994 Other lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
SRR1162740 Other lineage4.1.2.1 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR2693254 Other La1.6;La3;lineage4.9 None
ERR9786526 Other lineage4.1;lineage4.8 None
SRR16156817 Other lineage4.9 None
ERR3468544 Other lineage2.1;lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR14801749 HR-TB lineage4.9 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR6458421 MDR-TB lineage2.2.1 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR990545 Other lineage3 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR9125637 Sensitive lineage1.2.2.2 None
SRR13423544 Other lineage4.5 None
SRR28868489 Other lineage2.2.1 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR176766 HR-TB lineage2.1;lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR26937107 MDR-TB lineage2.2.1 None
SRR29050859 Other lineage4.9 None
ERR13285305 Other lineage4.9 None
SAMN02414850 Other lineage4.1.2.1 None
SRR1184024 RR-TB lineage2.2.1.1 None
SRR1183111 HR-TB lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR17658572 Sensitive lineage1.1.2 None
SRR29097066 Sensitive lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797081 Sensitive lineage4.9 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
SRR13861400 Other lineage4.9 None
ERR11252664 Other lineage2.2.1 None
SRR26159047 Other lineage4.6.3;lineage4.9 None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR987722 MDR-TB None
ERR212033 Other lineage4.9 None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6044815 Other lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
ERR9786525 Other lineage4.1;lineage4.8 None
SRR13861168 RR-TB lineage4.9 None
SRR1173453 Other lineage4.4.1.1 None
SRR13861266 Sensitive lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
SRR10808668 Sensitive lineage2.2.1 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR11252736 Other lineage4.9 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR3275220 Other lineage3 nl
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR4872077 Pre-XDR-TB lineage5.2 None
ERR9119508 MDR-TB lineage4.6.4 None
ERR245758 Other lineage4.9.1 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR4821053 RR-TB lineage3 None
SRR13861176 Other lineage4.9 None
ERR323036 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR9896144 Other lineage3 None
SRR1163221 MDR-TB lineage4.1.2.1 None
SRR1167055 Other lineage4.1.2.1 None
SRR1167271 MDR-TB lineage4.1.1.3 None
SRR1166821 Other lineage4.1.2.1 None
SRR1165628 Other La3;lineage4.9 None
SRR13861146 RR-TB lineage4.9 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR1169306 Other La3;lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR4798648 MDR-TB lineage3.1.2.2 None