EBG00000313339 - n.156C>T


Drug resistance types
29 Sensitive 10 RR-TB 81 HR-TB 14 MDR-TB 9 Pre-XDR-TB 0 XDR-TB 88 Other
lineage Counts
lineage Count
75
lineage2.2.1 14
lineage4.1.1.2 1
lineage3 7
lineage4.1.1 1
lineage4.1.2.1 16
lineage4.9 35
lineage4 9
lineage1.1 1
lineage2.2 4
lineage4.6.4 2
lineage5.2 2
lineage4.6.2.2 2
lineage4.3.3 4
lineage4.8 4
La1.8.1 3
lineage3.1 2
La2 1
lineage4.1.2 1
lineage4.7 1
lineage4.2.1 2
lineage4.4.1.2 1
lineage4.4.1.1 3
lineage4.1.1.3.1 1
La1.2 3
lineage3.1.2 1
lineage1.1.2 3
lineage3.1.2.1 1
lineage4.3.4.1 1
lineage4.1.2.1.1 1
lineage4.9.1 1
lineage4.3.2 1
lineage1.1.3.2 1
lineage4.8;lineage4.1 2
lineage1.2.2.2 2
lineage3.1.2.2;lineage3.1.2.1 1
lineage2.2.2 2
lineage2 1
lineage4.1.1.3 3
La3 1
lineage2.2.1.1 4
lineage4.5 1
lineage1.2.1.2.1 1
lineage9;lineage3.1 1
lineage4.1 1
lineage4.9;lineage4.6.3 1
lineage3;lineage2.1 1
lineage4.3.4.2.1 2
lineage4.3 1
lineage4;lineage1.1.2 1
spoligotype Counts
spoligotype Count
None 231
Geographic prevalence
Country level data for this variant is available for 8 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR2693231 Other None
ERR3275196 Other lineage2.2.1 nl
ERR4818252 Other lineage4.1.1.2 None
ERR3275220 Other lineage3 nl
ERR2446563 Other lineage2.2.1 nl
ERR2229143 Other lineage4.1.1 None
SAMN02414850 Other lineage4.1.2.1 None
ERR4821053 Other lineage3 None
SRR5341470 HR-TB None
ERR2693254 Other None
ERR2693230 Other None
ERR2693239 HR-TB None
ERR2446118 Other lineage4.1.2.1 nl
ERR2693257 Other None
ERR278594 HR-TB None
SRR6045519 HR-TB None
ERR2693232 Other lineage4.9 None
ERR4821655 Sensitive lineage4 None
ERR2446144 Other lineage3 nl
SRR6045158 Other lineage4.9 None
SRR6045952 HR-TB None
SRR6045264 Sensitive lineage2.2.1 None
SRR6046225 HR-TB None
SRR6045399 Other None
ERR2517489 Sensitive lineage4.1.2.1 nl
SRR6325442 HR-TB None
SRR6046259 Sensitive lineage4.9 None
SRR6046362 HR-TB None
SRR6325444 HR-TB None
ERR2517528 Other lineage3 nl
SRR6046250 Other lineage4.9 None
SRR6046397 Other None
SRR6046460 HR-TB None
SRR6325448 HR-TB None
SRR6046514 HR-TB None
SRR6458421 MDR-TB lineage2.2.1 None
SRR6325447 HR-TB None
ERR3077978 Other lineage1.1 None
SRR6397654 HR-TB lineage4.1.2.1 None
ERR4831545 Pre-XDR-TB lineage2.2 None
ERR4872102 MDR-TB lineage4.6.4 None
ERR4872077 Pre-XDR-TB lineage5.2 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR4831546 HR-TB lineage2.2 None
SRR6831950 Other lineage4.3.3 None
SRR6982141 RR-TB lineage4.3.3 None
ERR294266 HR-TB None
ERR294248 HR-TB None
SRR7645927 Other lineage4.8 None
ERR5087450 Other La1.8.1 None
ERR5311099 HR-TB None
SRR7645906 Other lineage2.2.1 None
ERR323034 HR-TB lineage3.1 None
ERR323036 HR-TB None
ERR502524 HR-TB La2 None
ERR5311081 HR-TB None
ERR5311090 HR-TB None
ERR323038 HR-TB None
SRR9970978 Sensitive lineage4.1.2 None
ERR323054 HR-TB lineage3.1 None
SRR7645928 RR-TB lineage4.7 None
SRR7755649 MDR-TB lineage4.2.1 None
ERR323041 HR-TB None
ERR323053 HR-TB None
ERR323039 HR-TB None
ERR323055 HR-TB None
ERR323056 HR-TB lineage4.4.1.2 None
ERR067699 HR-TB lineage4 None
ERR323063 HR-TB None
ERR1023295 HR-TB lineage4.1.2.1 None
ERR3283017 HR-TB None
ERR1034652 Other None
ERR133825 Sensitive lineage4 None
ERR3283032 HR-TB None
ERR3283024 Other None
ERR11465905 Sensitive lineage4.4.1.1 None
ERR3283048 HR-TB lineage4.9 None
ERR3797016 HR-TB None
ERR3468544 HR-TB None
ERR3797014 Other None
ERR473332 Other lineage4 None
ERR3797023 HR-TB La1.8.1 None
ERR3797082 Other lineage4.9 None
ERR387052 Pre-XDR-TB lineage4.1.1.3.1 None
ERR3797017 Other None
ERR3797044 Other None
ERR3797061 Other None
ERR3797081 Sensitive lineage4 None
ERR3797083 HR-TB None
ERR4188350 HR-TB None
ERR4772225 Other La1.2 None
ERR4798648 HR-TB lineage3.1.2 None
ERR4798139 Sensitive lineage1.1.2 None
ERR4798504 Other lineage3 None
ERR4799171 Pre-XDR-TB lineage4.8 None
ERR4800102 Sensitive lineage3.1.2.1 None
ERR5917710 Other lineage4.1.2.1 None
ERR5908228 Other lineage4.3.3 None
ERR6358991 HR-TB None
ERR6326069 Pre-XDR-TB lineage4.3.4.1 None
ERR6198317 Other La1.2 None
ERR6358837 HR-TB None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR245758 Other lineage4.9.1 None
ERR736856 HR-TB lineage4 None
ERR6359045 HR-TB None
ERR6866547 Sensitive lineage4 None
ERR736865 HR-TB None
ERR772255 MDR-TB lineage4.3.2 None
ERR8976043 HR-TB None
ERR7821126 Sensitive lineage1.1.3.2 None
ERR7821163 Other lineage2.2.1 None
ERR7911670 Pre-XDR-TB lineage2.2 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR9119096 Other lineage4.3.3 None
ERR9119483 Pre-XDR-TB lineage5.2 None
ERR9119508 MDR-TB lineage4.6.4 None
ERR9786525 Other lineage4.8;lineage4.1 None
ERR9125637 Sensitive lineage1.2.2.2 None
ERR9896144 Other lineage3 None
ERR9786619 Sensitive lineage4.8 None
ERR9786656 Sensitive lineage4.1.2.1 None
ERR987722 HR-TB None
ERR987729 HR-TB lineage3.1.2.2;lineage3.1.2.1 None
ERR9786526 Other lineage4.8;lineage4.1 None
ERR9786843 Other None
ERR990545 Other lineage3 None
SRR069978 Pre-XDR-TB lineage2.2.2 None
SRR1162864 HR-TB lineage4.1.2.1 None
SRR069981 HR-TB lineage2.2.2 None
SRR069989 HR-TB lineage2 None
SRR10808399 Sensitive lineage4 None
SRR10808668 Sensitive lineage2.2.1 None
SRR10808805 Sensitive None
SRR1162740 Other lineage4.1.2.1 None
SRR1165423 Other lineage4.1.2.1 None
SRR1163221 HR-TB lineage4.1.2.1 None
SRR1165584 Other lineage4.1.2.1 None
SRR1165506 Other lineage4.1.2.1 None
SRR1167271 MDR-TB lineage4.1.1.3 None
SRR1166821 HR-TB lineage4.1.2.1 None
SRR1167055 Other lineage4.1.2.1 None
SRR1167384 Other lineage4 None
SRR1169306 Other None
SRR1169249 Other La3 None
SRR1172214 HR-TB lineage4.9 None
SRR1172310 HR-TB None
SRR1173767 HR-TB lineage4.4.1.1 None
SRR1173453 Other lineage4.4.1.1 None
SRR1173633 HR-TB lineage4.9 None
SRR1181020 Other lineage2.2.1 None
SRR1180137 Other lineage2.2.1 None
SRR1173788 Other None
SRR1174897 HR-TB None
SRR1180147 Other lineage2.2.1.1 None
SRR1180172 Other lineage2.2.1 None
SRR1181289 Other lineage2.2.1 None
SRR1181091 Other lineage2.2.1.1 None
SRR1183049 Other lineage2.2 None
SRR1183145 Other lineage2.2.1 None
SRR1183144 Other lineage2.2.1 None
SRR1183106 Other lineage2.2.1.1 None
SRR13423544 Other lineage4.5 None
SRR1184024 Other lineage2.2.1.1 None
SRR13837566 Other lineage4.9 None
SRR13837615 Sensitive lineage4.9 None
SRR13861151 RR-TB lineage4.9 None
SRR13861146 Sensitive lineage4.9 None
SRR13861175 Other lineage4.9 None
SRR13861168 RR-TB lineage4.9 None
SRR13861176 Sensitive lineage4.9 None
SRR13861180 Other lineage4.9 None
SRR13861304 Other lineage4.9 None
SRR13861266 Sensitive lineage4.9 None
SRR13861326 Other lineage4.9 None
SRR13861332 Other lineage4.9 None
SRR13861386 HR-TB lineage4.9 None
SRR13861381 MDR-TB lineage4.9 None
SRR13861413 Sensitive lineage4.9 None
SRR13861400 Other lineage4.9 None
SRR13861439 RR-TB lineage4.9 None
SRR13861415 Other lineage4.9 None
SRR13861434 RR-TB lineage4.9 None
SRR13861534 Other lineage4.9 None
SRR13861500 RR-TB lineage4.9 None
SRR13861686 RR-TB lineage4.9 None
SRR13861666 Sensitive lineage4.9 None
SRR13861549 RR-TB lineage4.9 None
SRR13861646 Other lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
SRR14801749 Sensitive None
SRR16058433 Sensitive lineage1.2.2.2 None
SRR1510066 Other lineage1.2.1.2.1 None
SRR17658572 Sensitive lineage1.1.2 None
SRR16156804 RR-TB lineage4.9 None
SRR1640750 HR-TB None
SRR26937107 MDR-TB lineage2.2.1 None
SRR18213723 Sensitive lineage1.1.2 None
SRR25827418 Pre-XDR-TB lineage9;lineage3.1 None
SRR1791696 Other La1.8.1 None
SRR23961549 Other La1.2 None
SRR3675464 HR-TB lineage4.1 None
SRR26159047 Other lineage4.9;lineage4.6.3 None
ERR4814536 MDR-TB lineage3;lineage2.1 None
SRR6325445 HR-TB None
ERR550636 MDR-TB lineage4.1.1.3 None
ERR1035239 HR-TB None
SRR3675482 HR-TB None
ERR161034 Other lineage4.3.4.2.1 None
SRR3675488 HR-TB None
ERR161033 HR-TB None
SRR3675486 HR-TB None
SRR3675501 HR-TB None
SRR3675222 Other None
SRR3675234 Other None
ERR176568 Other lineage4.3 None
ERR176518 Sensitive lineage4.3.4.2.1 None
ERR212121 HR-TB None
SRR3675509 Other lineage4.9 None
ERR4816151 Other lineage4.8 None
ERR212033 HR-TB None
ERR176643 HR-TB None
ERR176740 HR-TB None
ERR176751 HR-TB None
ERR212001 HR-TB None
SRR3675558 HR-TB None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR4816466 HR-TB None
SRR3675571 HR-TB None
ERR3275215 Other lineage4.1.2.1 nl
ERR4817692 HR-TB lineage4;lineage1.1.2 None