TB-Profiler result

Run: SRR26159047

Summary

Run ID: SRR26159047

Sample name:

Date: 16-03-2024 13:29:54

Number of reads: 262757

Percentage reads mapped: 53.23

Strain: lineage4.9;lineage4.6.3

Drug-resistance: Other


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Drug resistance: This table reports drug-resistance associated mutations found in known resistance genes
Drug Resistance Supporting mutations
Rifampicin
Isoniazid
Ethambutol R embB p.Ala356Val (1.00), embB p.Tyr384Asn (1.00), embB p.Asn399Asp (1.00)
Pyrazinamide
Streptomycin
Fluoroquinolones
Moxifloxacin
Ofloxacin
Levofloxacin
Ciprofloxacin
Aminoglycosides
Amikacin
Capreomycin
Kanamycin
Cycloserine
Ethionamide
Clofazimine
Para-aminosalicylic_acid
Delamanid
Bedaquiline
Linezolid
Lineage Table: The lineage is inferred by analysing lineage specific SNPs
Lineage Family Main Spoligotype RDs Frequency
La1.7.1 M.bovis None None 0.11
lineage4 Euro-American LAM;T;S;X;H None 0.89
lineage4.9 Euro-American (H37Rv-like) T1 None 0.91
lineage4.6.3 Euro-American T;LAM None 0.06
lineage3.1.2.2 East-African-Indian CAS RD750 0.11
Drug resistance-Associated Mutations: This table reports mutations found in candidate resistance genes which have been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs
embB 4247580 p.Ala356Val missense_variant 1.0 ethambutol
embB 4247663 p.Tyr384Asn missense_variant 1.0 ethambutol
embB 4247708 p.Asn399Asp missense_variant 1.0 ethambutol
Non-Associated Mutations: This table reports mutations found in candidate resistance genes which have not been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction
gyrB 6172 c.933C>T synonymous_variant 1.0
gyrB 6190 c.951A>G synonymous_variant 1.0
gyrB 6214 c.975G>C synonymous_variant 1.0
gyrB 6238 c.999G>A synonymous_variant 1.0
gyrB 6242 p.Arg335Lys missense_variant 1.0
gyrB 6253 c.1014G>C synonymous_variant 1.0
gyrB 6265 c.1026C>T synonymous_variant 1.0
gyrB 6280 c.1041T>C synonymous_variant 1.0
gyrB 6286 c.1047T>C synonymous_variant 1.0
gyrB 6292 c.1053G>A synonymous_variant 1.0
gyrB 6298 c.1059C>G synonymous_variant 0.96
gyrB 6299 c.1060C>T synonymous_variant 0.95
gyrA 6307 c.-995T>G upstream_gene_variant 1.0
gyrA 6316 c.-986G>C upstream_gene_variant 1.0
gyrB 6326 p.Ser363Ala missense_variant 1.0
gyrA 6331 c.-971A>G upstream_gene_variant 1.0
gyrA 6673 c.-629A>C upstream_gene_variant 1.0
gyrA 6674 c.-628_-626delCTTinsTTG upstream_gene_variant 0.91
gyrA 6700 c.-602T>C upstream_gene_variant 1.0
gyrA 6703 c.-599G>C upstream_gene_variant 1.0
gyrA 6706 c.-596G>A upstream_gene_variant 1.0
gyrA 6709 c.-593A>G upstream_gene_variant 1.0
gyrA 6712 c.-590G>C upstream_gene_variant 1.0
gyrA 6730 c.-572A>G upstream_gene_variant 1.0
gyrA 6733 c.-569G>A upstream_gene_variant 1.0
gyrA 6745 c.-557T>C upstream_gene_variant 1.0
gyrA 6751 c.-551G>C upstream_gene_variant 1.0
gyrA 6760 c.-542G>C upstream_gene_variant 1.0
gyrA 6769 c.-533C>T upstream_gene_variant 1.0
gyrA 6775 c.-527G>C upstream_gene_variant 1.0
gyrA 6787 c.-515G>A upstream_gene_variant 1.0
gyrB 6911 p.Asn558His missense_variant 1.0
gyrA 6931 c.-371A>G upstream_gene_variant 1.0
gyrA 6934 c.-368A>G upstream_gene_variant 1.0
gyrA 6949 c.-353A>G upstream_gene_variant 1.0
gyrA 6955 c.-347G>A upstream_gene_variant 1.0
gyrA 6967 c.-335T>C upstream_gene_variant 1.0
gyrA 6970 c.-332C>T upstream_gene_variant 1.0
gyrA 6976 c.-326A>G upstream_gene_variant 1.0
gyrA 6982 c.-320A>C upstream_gene_variant 1.0
gyrA 6985 c.-317C>T upstream_gene_variant 1.0
gyrA 6994 c.-308C>G upstream_gene_variant 1.0
gyrA 6997 c.-305G>A upstream_gene_variant 1.0
gyrA 7000 c.-302C>T upstream_gene_variant 1.0
gyrA 7003 c.-299C>T upstream_gene_variant 1.0
gyrA 7006 c.-296T>G upstream_gene_variant 1.0
gyrA 7007 c.-295C>T upstream_gene_variant 0.94
gyrB 7023 p.Leu595Gln missense_variant 1.0
gyrA 7048 c.-254G>A upstream_gene_variant 1.0
gyrB 7051 p.Glu604Asp missense_variant 1.0
gyrA 7057 c.-245C>T upstream_gene_variant 1.0
gyrA 7060 c.-242T>C upstream_gene_variant 1.0
gyrA 7469 c.168C>G synonymous_variant 1.0
gyrA 7472 c.171T>C synonymous_variant 1.0
gyrA 7475 c.174A>G synonymous_variant 1.0
gyrA 7480 p.Phe60Tyr missense_variant 1.0
gyrA 7484 c.183T>C synonymous_variant 1.0
gyrA 7490 c.189C>G synonymous_variant 1.0
gyrA 7502 c.201C>T synonymous_variant 1.0
gyrA 7526 c.225G>T synonymous_variant 1.0
gyrA 7532 c.231T>C synonymous_variant 1.0
gyrA 7541 c.240C>G synonymous_variant 1.0
gyrA 7547 c.246C>T synonymous_variant 1.0
gyrA 7585 p.Ser95Thr missense_variant 1.0
gyrA 8531 c.1230G>T synonymous_variant 1.0
gyrA 8535 p.Glu412Gln missense_variant 1.0
gyrA 8543 c.1242C>T synonymous_variant 1.0
gyrA 8546 c.1245T>C synonymous_variant 1.0
gyrA 8555 c.1254G>C synonymous_variant 1.0
gyrA 8561 c.1260A>C synonymous_variant 1.0
gyrA 8585 c.1284C>T synonymous_variant 1.0
gyrA 8588 c.1287G>A synonymous_variant 1.0
gyrA 8619 c.1318T>C synonymous_variant 1.0
gyrA 8624 c.1323G>T synonymous_variant 1.0
gyrA 8627 c.1326C>A synonymous_variant 1.0
gyrA 8636 c.1335A>C synonymous_variant 1.0
gyrA 8642 c.1341A>G synonymous_variant 1.0
gyrA 8655 p.Ile452Val missense_variant 1.0
gyrA 8672 c.1371A>G synonymous_variant 1.0
gyrA 8678 c.1377G>A synonymous_variant 1.0
gyrA 8694 c.1393C>T synonymous_variant 1.0
gyrA 8711 c.1410A>C synonymous_variant 1.0
gyrA 8714 c.1413A>G synonymous_variant 1.0
gyrA 8717 c.1416C>G synonymous_variant 1.0
gyrA 8720 c.1419G>A synonymous_variant 1.0
gyrA 8729 c.1428T>C synonymous_variant 1.0
gyrA 8747 c.1446A>G synonymous_variant 1.0
gyrA 8765 p.Asp488Glu missense_variant 1.0
gyrA 8767 p.Arg489Lys missense_variant 1.0
gyrA 8779 p.Asp493Ala missense_variant 1.0
gyrA 8786 c.1485T>C synonymous_variant 1.0
gyrA 8789 c.1488C>T synonymous_variant 1.0
gyrA 8792 c.1491G>C synonymous_variant 1.0
gyrA 8798 c.1497C>T synonymous_variant 1.0
gyrA 8810 c.1509A>C synonymous_variant 1.0
gyrA 8813 p.Asp504Glu missense_variant 1.0
gyrA 8818 p.Ser506Asn missense_variant 1.0
gyrA 8829 c.1528T>C synonymous_variant 1.0
gyrA 8840 c.1539C>G synonymous_variant 1.0
gyrA 8852 c.1551T>C synonymous_variant 1.0
gyrA 8858 c.1557T>G synonymous_variant 1.0
gyrA 8870 c.1569G>C synonymous_variant 1.0
gyrA 8873 c.1572A>T synonymous_variant 1.0
gyrA 8888 c.1587C>G synonymous_variant 1.0
gyrA 8897 c.1596T>C synonymous_variant 1.0
gyrA 8903 c.1602T>C synonymous_variant 1.0
gyrA 8915 c.1614A>G synonymous_variant 1.0
gyrA 8924 c.1623C>T synonymous_variant 1.0
gyrA 8930 c.1629C>G synonymous_variant 1.0
gyrA 8933 c.1632G>T synonymous_variant 1.0
gyrA 8936 c.1635G>A synonymous_variant 1.0
gyrA 8939 c.1638T>C synonymous_variant 1.0
gyrA 8942 c.1641G>C synonymous_variant 1.0
gyrA 8946 c.1645_1647delTTGinsCTC synonymous_variant 1.0
gyrA 8983 p.Cys561Ser missense_variant 1.0
gyrA 8987 c.1686C>G synonymous_variant 1.0
gyrA 8990 c.1689C>G synonymous_variant 1.0
gyrA 8996 c.1695T>C synonymous_variant 1.0
gyrA 8998 p.Leu566Trp missense_variant 1.0
gyrA 9003 c.1702C>T synonymous_variant 1.0
gyrA 9023 c.1722A>C synonymous_variant 0.97
gyrA 9029 c.1728T>A synonymous_variant 1.0
gyrA 9032 c.1731T>C synonymous_variant 1.0
gyrA 9035 c.1734G>C synonymous_variant 1.0
gyrA 9038 c.1737C>G synonymous_variant 1.0
gyrA 9050 p.Asp583Glu missense_variant 0.93
gyrA 9051 c.1750T>C synonymous_variant 1.0
gyrA 9062 c.1761C>A synonymous_variant 1.0
gyrA 9071 c.1770G>C synonymous_variant 1.0
gyrA 9074 c.1773G>C synonymous_variant 1.0
gyrA 9080 c.1779G>T synonymous_variant 1.0
gyrA 9089 c.1788G>C synonymous_variant 1.0
gyrA 9101 c.1800A>G synonymous_variant 1.0
gyrA 9104 c.1803C>A synonymous_variant 1.0
gyrA 9110 c.1809G>A synonymous_variant 1.0
gyrA 9128 c.1827C>A synonymous_variant 1.0
gyrA 9143 c.1842T>C synonymous_variant 1.0
gyrA 9147 p.Gly616Ser missense_variant 1.0
gyrA 9153 p.Thr618Glu missense_variant 1.0
gyrA 9161 c.1860C>G synonymous_variant 1.0
gyrA 9164 c.1863G>C synonymous_variant 1.0
gyrA 9167 c.1866C>T synonymous_variant 1.0
gyrA 9182 c.1881T>C synonymous_variant 1.0
gyrA 9183 p.Arg628Lys missense_variant 1.0
gyrA 9197 c.1896G>C synonymous_variant 1.0
gyrA 9230 c.1929T>C synonymous_variant 1.0
gyrA 9236 c.1935G>C synonymous_variant 1.0
gyrA 9242 c.1941A>C synonymous_variant 1.0
gyrA 9248 c.1947G>C synonymous_variant 1.0
gyrA 9252 p.Val651Ile missense_variant 1.0
gyrA 9266 c.1965C>T synonymous_variant 1.0
gyrA 9284 c.1983T>C synonymous_variant 1.0
gyrA 9287 c.1986G>C synonymous_variant 1.0
gyrA 9291 c.1990C>T synonymous_variant 1.0
gyrA 9296 c.1995T>C synonymous_variant 1.0
gyrA 9304 p.Gly668Glu missense_variant 1.0
gyrA 9308 p.Asp669Glu missense_variant 1.0
gyrA 9315 c.2014C>T synonymous_variant 1.0
gyrA 9326 c.2025G>T synonymous_variant 1.0
gyrA 9338 c.2037G>A synonymous_variant 1.0
gyrA 9341 c.2040C>G synonymous_variant 1.0
gyrA 9345 c.2044A>C synonymous_variant 1.0
gyrA 9383 c.2082T>C synonymous_variant 1.0
gyrA 9386 c.2085T>C synonymous_variant 1.0
gyrA 9395 c.2094G>C synonymous_variant 1.0
gyrA 9398 c.2097T>C synonymous_variant 1.0
mshA 575704 c.357T>C synonymous_variant 1.0
mshA 575705 c.358T>C synonymous_variant 1.0
mshA 575713 c.366G>A synonymous_variant 1.0
mshA 575719 c.372C>T synonymous_variant 1.0
mshA 575734 c.387T>G synonymous_variant 1.0
mshA 575746 c.399C>G synonymous_variant 1.0
mshA 575767 c.420G>A synonymous_variant 1.0
mshA 575772 p.Val142Ala missense_variant 1.0
mshA 575779 p.Glu144Asp missense_variant 1.0
mshA 575780 p.Pro145Ala missense_variant 1.0
mshA 575821 c.474G>C synonymous_variant 1.0
mshA 575824 c.477T>G synonymous_variant 1.0
mshA 575827 c.480G>A synonymous_variant 1.0
mshA 575842 c.495G>C synonymous_variant 1.0
mshA 575845 c.498C>G synonymous_variant 1.0
mshA 575848 c.501C>T synonymous_variant 1.0
mshA 575851 c.504C>G synonymous_variant 1.0
ccsA 620238 c.348G>C synonymous_variant 0.95
ccsA 620245 c.355T>C synonymous_variant 0.95
ccsA 620249 p.Ser120Cys missense_variant 0.95
ccsA 620253 c.363G>C synonymous_variant 0.95
ccsA 620254 c.364_366delCTCinsTTG synonymous_variant 0.95
ccsA 620271 c.381C>G synonymous_variant 0.96
ccsA 620284 p.Ala132Pro missense_variant 0.96
ccsA 620288 p.Arg133Gln missense_variant 0.96
ccsA 620291 p.Tyr134Phe missense_variant 0.96
ccsA 620307 c.417C>G synonymous_variant 0.96
ccsA 620317 p.Val143Leu missense_variant 0.95
ccsA 620325 c.435G>C synonymous_variant 0.96
ccsA 620343 c.453G>C synonymous_variant 0.95
ccsA 620349 c.459A>T synonymous_variant 0.95
ccsA 620362 p.Ala158Thr missense_variant 0.94
ccsA 620367 c.477T>C synonymous_variant 0.93
ccsA 620373 c.483C>G synonymous_variant 1.0
ccsA 620376 c.486G>C synonymous_variant 1.0
ccsA 620388 c.498A>C synonymous_variant 1.0
ccsA 620389 c.499C>T synonymous_variant 1.0
ccsA 620589 c.699G>T synonymous_variant 1.0
ccsA 620598 c.708C>G synonymous_variant 1.0
ccsA 620604 c.714C>G synonymous_variant 1.0
ccsA 620607 c.717T>G synonymous_variant 1.0
ccsA 620613 c.723C>G synonymous_variant 1.0
ccsA 620625 c.735A>C synonymous_variant 1.0
ccsA 620631 c.741T>G synonymous_variant 1.0
ccsA 620649 c.759A>G synonymous_variant 1.0
ccsA 620652 c.762C>G synonymous_variant 1.0
ccsA 620661 c.771C>G synonymous_variant 1.0
ccsA 620685 c.795G>A synonymous_variant 1.0
ccsA 620698 p.Val270Ile missense_variant 1.0
ccsA 620712 c.822G>C synonymous_variant 1.0
ccsA 620721 c.831G>A synonymous_variant 1.0
ccsA 620733 c.843G>C synonymous_variant 1.0
ccsA 620739 c.849A>G synonymous_variant 1.0
ccsA 620742 c.852G>C synonymous_variant 1.0
ccsA 620748 c.858T>C synonymous_variant 1.0
ccsA 620778 c.888T>C synonymous_variant 1.0
ccsA 620781 c.891C>G synonymous_variant 1.0
ccsA 620783 p.Ala298Val missense_variant 1.0
ccsA 620787 c.897C>A synonymous_variant 1.0
ccsA 620796 c.906C>G synonymous_variant 1.0
ccsA 620829 c.939G>C synonymous_variant 1.0
rpoB 760037 c.231G>T synonymous_variant 1.0
rpoB 760043 c.237C>T synonymous_variant 1.0
rpoB 760046 c.240G>C synonymous_variant 1.0
rpoB 760056 c.250_252delCTCinsTTG synonymous_variant 1.0
rpoB 760070 c.264T>G synonymous_variant 1.0
rpoB 760091 c.285G>C synonymous_variant 1.0
rpoB 760101 c.295T>C synonymous_variant 1.0
rpoB 760112 c.306T>C synonymous_variant 1.0
rpoB 760118 c.312T>C synonymous_variant 1.0
rpoB 760121 c.315T>C synonymous_variant 1.0
rpoB 760130 p.Asp108Glu missense_variant 1.0
rpoB 760139 c.333A>G synonymous_variant 1.0
rpoB 760142 c.336C>G synonymous_variant 1.0
rpoB 760145 c.339C>G synonymous_variant 1.0
rpoB 760181 c.375T>A synonymous_variant 1.0
rpoB 760184 c.378A>G synonymous_variant 1.0
rpoB 760196 c.390C>G synonymous_variant 1.0
rpoB 760235 c.429T>C synonymous_variant 1.0
rpoB 760244 c.438G>C synonymous_variant 1.0
rpoB 760805 c.999G>C synonymous_variant 1.0
rpoB 760817 c.1011A>G synonymous_variant 1.0
rpoB 760820 c.1014T>C synonymous_variant 1.0
rpoB 760826 c.1020C>G synonymous_variant 1.0
rpoB 760830 c.1024T>C synonymous_variant 1.0
rpoB 760841 c.1035T>C synonymous_variant 1.0
rpoB 760845 p.Thr347Pro missense_variant 1.0
rpoB 760856 c.1050C>G synonymous_variant 1.0
rpoB 760916 c.1110C>G synonymous_variant 1.0
rpoB 760919 c.1113C>G synonymous_variant 1.0
rpoB 760925 c.1119T>C synonymous_variant 1.0
rpoB 760928 c.1122G>C synonymous_variant 1.0
rpoB 760931 c.1125C>G synonymous_variant 1.0
rpoB 760937 c.1131G>A synonymous_variant 1.0
rpoB 760946 c.1140A>G synonymous_variant 1.0
rpoB 760973 c.1167G>C synonymous_variant 1.0
rpoB 760982 c.1176G>T synonymous_variant 1.0
rpoB 760985 c.1179G>T synonymous_variant 1.0
rpoB 760991 c.1185G>T synonymous_variant 1.0
rpoB 761006 c.1200C>T synonymous_variant 1.0
rpoB 761015 c.1209G>C synonymous_variant 1.0
rpoB 761021 c.1215G>C synonymous_variant 1.0
rpoB 761027 c.1221A>G synonymous_variant 1.0
rpoB 761132 c.1326G>T synonymous_variant 1.0
rpoB 761133 c.1327_1329delTTGinsCTC synonymous_variant 1.0
rpoB 761150 c.1344A>C synonymous_variant 1.0
rpoB 761168 c.1362C>G synonymous_variant 1.0
rpoB 761180 c.1374A>C synonymous_variant 1.0
rpoB 761240 c.1434C>T synonymous_variant 1.0
rpoB 761249 c.1443A>G synonymous_variant 1.0
rpoB 761255 c.1449T>C synonymous_variant 1.0
rpoB 761261 c.1455G>T synonymous_variant 1.0
rpoB 761264 c.1458C>G synonymous_variant 1.0
rpoB 761282 c.1476C>G synonymous_variant 1.0
rpoB 761327 c.1521A>G synonymous_variant 1.0
rpoB 761345 c.1539G>T synonymous_variant 1.0
rpoB 761354 c.1548C>T synonymous_variant 1.0
rpoB 761360 c.1554T>C synonymous_variant 1.0
rpoB 761362 p.Ser519Thr missense_variant 1.0
rpoB 761374 p.Val523Glu missense_variant 1.0
rpoB 761414 c.1608A>G synonymous_variant 1.0
rpoB 761423 c.1617T>C synonymous_variant 1.0
rpoB 761435 c.1629T>C synonymous_variant 1.0
rpoB 761438 c.1632G>C synonymous_variant 1.0
rpoB 761444 c.1638T>C synonymous_variant 1.0
rpoB 761531 c.1725C>G synonymous_variant 1.0
rpoB 761537 c.1731C>G synonymous_variant 1.0
rpoB 761558 c.1752C>G synonymous_variant 1.0
rpoB 761570 c.1764T>C synonymous_variant 1.0
rpoB 761573 c.1767C>G synonymous_variant 1.0
rpoB 761579 c.1773G>C synonymous_variant 1.0
rpoB 761606 c.1800C>G synonymous_variant 1.0
rpoB 761612 c.1806G>T synonymous_variant 0.95
rpoB 761615 c.1809A>C synonymous_variant 1.0
rpoB 761636 c.1830G>T synonymous_variant 1.0
rpoB 761645 c.1839C>A synonymous_variant 1.0
rpoB 761648 c.1842T>C synonymous_variant 1.0
rpoB 761666 c.1860G>C synonymous_variant 1.0
rpoB 761690 c.1884G>C synonymous_variant 1.0
rpoB 761723 c.1917_1919delAGAinsC frameshift_variant&missense_variant 1.0
rpoB 761732 c.1926C>G synonymous_variant 0.92
rpoB 761735 c.1929C>G synonymous_variant 1.0
rpoB 761750 c.1944G>C synonymous_variant 1.0
rpoB 761765 c.1959T>C synonymous_variant 1.0
rpoB 761772 p.His656Ala missense_variant 1.0
rpoB 761778 p.Asn658Asp missense_variant 1.0
rpoB 761791 p.Arg662His missense_variant 1.0
rpoB 761813 c.2007T>C synonymous_variant 1.0
rpoB 761828 c.2022C>T synonymous_variant 1.0
rpoB 761834 c.2028T>C synonymous_variant 1.0
rpoB 761837 c.2031C>T synonymous_variant 1.0
rpoB 761848 p.Cys681Ser missense_variant 1.0
rpoB 761852 c.2046C>G synonymous_variant 1.0
rpoB 761858 c.2052G>C synonymous_variant 1.0
rpoB 761873 c.2067A>C synonymous_variant 1.0
rpoB 761885 c.2079T>C synonymous_variant 1.0
rpoB 761891 c.2085G>C synonymous_variant 1.0
rpoB 761909 c.2103T>C synonymous_variant 1.0
rpoB 761912 c.2106T>C synonymous_variant 1.0
rpoB 761913 p.Asp703Gln missense_variant 1.0
rpoB 761916 p.Asp704Asn missense_variant 1.0
rpoB 761921 c.2115C>T synonymous_variant 1.0
rpoB 761930 c.2124G>C synonymous_variant 1.0
rpoB 761954 c.2148C>G synonymous_variant 1.0
rpoB 762008 c.2202C>G synonymous_variant 1.0
rpoB 762014 c.2208C>T synonymous_variant 1.0
rpoB 762047 c.2241G>A synonymous_variant 1.0
rpoB 762050 c.2244G>A synonymous_variant 0.96
rpoB 762053 c.2247T>C synonymous_variant 1.0
rpoB 762062 c.2256T>C synonymous_variant 1.0
rpoB 762065 c.2259T>C synonymous_variant 1.0
rpoB 762083 c.2277T>C synonymous_variant 1.0
rpoB 762086 c.2280G>C synonymous_variant 1.0
rpoB 762101 c.2295C>G synonymous_variant 1.0
rpoB 762114 p.Ile770Val missense_variant 1.0
rpoB 762131 c.2325C>G synonymous_variant 1.0
rpoB 762134 c.2328C>G synonymous_variant 1.0
rpoB 762143 c.2337T>C synonymous_variant 1.0
rpoB 762167 c.2361T>C synonymous_variant 1.0
rpoB 762185 c.2379G>C synonymous_variant 1.0
rpoB 762233 c.2427G>T synonymous_variant 0.96
rpoB 762254 c.2448T>G synonymous_variant 0.96
rpoB 762257 c.2451C>G synonymous_variant 0.96
rpoB 762266 c.2460T>C synonymous_variant 0.95
rpoB 762281 c.2475G>A synonymous_variant 0.95
rpoB 762284 c.2478G>C synonymous_variant 0.95
rpoB 762293 c.2487T>C synonymous_variant 0.95
rpoB 762317 c.2511A>G synonymous_variant 0.93
rpoB 762338 c.2532T>C synonymous_variant 0.94
rpoB 762341 c.2535G>C synonymous_variant 0.94
rpoB 762347 c.2541T>C synonymous_variant 0.95
rpoB 762362 p.Glu852Asp missense_variant 0.95
rpoB 762369 c.2563T>C synonymous_variant 1.0
rpoC 762395 c.-975G>C upstream_gene_variant 1.0
rpoC 762398 c.-972T>C upstream_gene_variant 1.0
rpoC 762401 c.-969G>C upstream_gene_variant 1.0
rpoC 762404 c.-966T>C upstream_gene_variant 1.0
rpoC 762416 c.-954A>G upstream_gene_variant 1.0
rpoC 762431 c.-939C>T upstream_gene_variant 1.0
rpoC 762441 c.-929C>T upstream_gene_variant 1.0
rpoC 762449 c.-921C>A upstream_gene_variant 1.0
rpoC 762470 c.-900G>C upstream_gene_variant 1.0
rpoC 762902 c.-468C>T upstream_gene_variant 1.0
rpoC 762917 c.-453C>T upstream_gene_variant 1.0
rpoC 762926 c.-444C>T upstream_gene_variant 1.0
rpoC 762929 c.-441G>T upstream_gene_variant 1.0
rpoC 762962 c.-408C>T upstream_gene_variant 1.0
rpoC 762983 c.-387C>G upstream_gene_variant 1.0
rpoC 762995 c.-375G>T upstream_gene_variant 1.0
rpoC 763031 c.-339T>C upstream_gene_variant 1.0
rpoC 763034 c.-336C>G upstream_gene_variant 1.0
rpoC 763040 c.-330C>G upstream_gene_variant 1.0
rpoC 763050 c.-320C>T upstream_gene_variant 0.97
rpoC 763070 c.-300T>C upstream_gene_variant 1.0
rpoC 763082 c.-288C>T upstream_gene_variant 1.0
rpoC 763085 c.-285C>G upstream_gene_variant 1.0
rpoC 763115 c.-255T>C upstream_gene_variant 1.0
rpoC 763127 c.-243G>C upstream_gene_variant 1.0
rpoC 763166 c.-204A>G upstream_gene_variant 1.0
rpoC 763169 c.-201A>G upstream_gene_variant 1.0
rpoC 763202 c.-168A>C upstream_gene_variant 1.0
rpoC 763205 c.-165G>T upstream_gene_variant 1.0
rpoC 763206 c.-164_-162delAGTinsTCC upstream_gene_variant 1.0
rpoC 763226 c.-144A>G upstream_gene_variant 1.0
rpoC 763238 c.-132T>C upstream_gene_variant 1.0
rpoC 763241 c.-129G>A upstream_gene_variant 1.0
rpoC 763250 c.-120C>T upstream_gene_variant 0.93
rpoC 763253 c.-117G>T upstream_gene_variant 1.0
rpoC 763402 c.33C>T synonymous_variant 1.0
rpoC 763409 c.40_42delCTTinsTTG synonymous_variant 1.0
rpoC 763414 c.45T>G synonymous_variant 1.0
rpoC 763441 c.72C>T synonymous_variant 1.0
rpoC 763444 c.75T>C synonymous_variant 1.0
rpoC 763447 c.78C>T synonymous_variant 1.0
rpoC 763456 c.87A>G synonymous_variant 1.0
rpoC 763486 c.117T>G synonymous_variant 1.0
rpoC 763528 c.159G>A synonymous_variant 1.0
rpoC 763546 c.177A>G synonymous_variant 1.0
rpoC 763570 c.201G>C synonymous_variant 1.0
rpoC 763594 c.225C>T synonymous_variant 1.0
rpoC 763603 c.234C>T synonymous_variant 0.94
rpoC 763618 c.249C>T synonymous_variant 1.0
rpoC 763636 c.267T>C synonymous_variant 1.0
rpoC 763660 c.291T>G synonymous_variant 1.0
rpoC 763669 c.300C>G synonymous_variant 1.0
rpoC 763675 c.306C>G synonymous_variant 1.0
rpoC 763703 c.334_336delTCGinsAGC synonymous_variant 1.0
rpoC 763709 c.340C>T synonymous_variant 1.0
rpoC 763714 c.345G>C synonymous_variant 1.0
rpoC 763726 c.357C>T synonymous_variant 1.0
rpoC 763732 c.363C>G synonymous_variant 1.0
rpoC 763741 c.372C>T synonymous_variant 1.0
rpoC 763744 c.375G>C synonymous_variant 1.0
rpoC 763765 c.396T>G synonymous_variant 1.0
rpoC 763771 c.402C>T synonymous_variant 1.0
rpoC 763780 c.411C>G synonymous_variant 1.0
rpoC 763792 p.Glu141Asp missense_variant 1.0
rpoC 763801 c.432C>G synonymous_variant 1.0
rpoC 763807 c.438T>C synonymous_variant 1.0
rpoC 763836 p.Ala156Val missense_variant 1.0
rpoC 763851 p.Ala161Gly missense_variant 1.0
rpoC 763855 c.486C>T synonymous_variant 1.0
rpoC 763858 c.489A>G synonymous_variant 1.0
rpoC 763872 p.Gly168Ala missense_variant 0.97
rpoC 763876 p.Glu169Asp missense_variant 1.0
rpoC 763879 c.510A>G synonymous_variant 1.0
rpoC 763888 c.519G>C synonymous_variant 1.0
rpoC 763891 c.522G>C synonymous_variant 1.0
rpoC 763894 c.525A>G synonymous_variant 1.0
rpoC 763936 c.567C>G synonymous_variant 1.0
rpoC 763939 c.570G>A synonymous_variant 1.0
rpoC 763945 c.576T>C synonymous_variant 1.0
rpoC 763951 c.582G>A synonymous_variant 1.0
rpoC 763960 c.591T>G synonymous_variant 1.0
rpoC 763963 c.594C>G synonymous_variant 1.0
rpoC 763967 p.Gly200Ser missense_variant 1.0
rpoC 763972 c.603C>T synonymous_variant 1.0
rpoC 763987 c.618C>T synonymous_variant 1.0
rpoC 763993 c.624C>A synonymous_variant 0.98
rpoC 763996 c.627T>C synonymous_variant 1.0
rpoC 764005 c.636G>C synonymous_variant 1.0
rpoC 764011 c.642T>C synonymous_variant 1.0
rpoC 764024 c.655T>C synonymous_variant 1.0
rpoC 764040 p.Ser224Thr missense_variant 1.0
rpoC 764044 c.675T>G synonymous_variant 1.0
rpoC 764059 c.690G>T synonymous_variant 1.0
rpoC 764083 c.714A>G synonymous_variant 1.0
rpoC 764101 c.732C>G synonymous_variant 1.0
rpoC 764140 c.771C>T synonymous_variant 1.0
rpoC 764159 c.790C>T synonymous_variant 1.0
rpoC 764167 c.798G>A synonymous_variant 1.0
rpoC 764188 c.819A>G synonymous_variant 1.0
rpoC 764195 p.Ser276Ile missense_variant 1.0
rpoC 764215 c.846A>C synonymous_variant 1.0
rpoC 764218 c.849C>T synonymous_variant 1.0
rpoC 764242 c.873C>T synonymous_variant 1.0
rpoC 764245 c.876C>A synonymous_variant 1.0
rpoC 764246 c.877_879delCTCinsTTG synonymous_variant 1.0
rpoC 764263 c.894G>C synonymous_variant 1.0
rpoC 764266 c.897T>C synonymous_variant 1.0
rpoC 764278 c.909A>G synonymous_variant 1.0
rpoC 764815 c.1446A>G synonymous_variant 1.0
rpoC 764858 c.1489T>C synonymous_variant 0.94
rpoC 764887 c.1518G>C synonymous_variant 1.0
rpoC 764888 c.1519_1521delTTGinsCTC synonymous_variant 1.0
rpoC 764896 c.1527C>T synonymous_variant 0.97
rpoC 764902 c.1533C>T synonymous_variant 1.0
rpoC 764911 c.1542A>G synonymous_variant 1.0
rpoC 764923 c.1554A>G synonymous_variant 1.0
rpoC 764932 c.1563C>G synonymous_variant 1.0
rpoC 764948 c.1579T>C synonymous_variant 1.0
rpoC 764968 c.1599T>C synonymous_variant 1.0
rpoC 765007 c.1638T>G synonymous_variant 1.0
rpoC 765008 c.1639T>C synonymous_variant 1.0
rpoC 765013 c.1644C>T synonymous_variant 1.0
rpoC 765019 c.1650A>G synonymous_variant 1.0
rpoC 765040 c.1671T>C synonymous_variant 1.0
rpoC 765041 c.1672T>C synonymous_variant 1.0
rpoC 765047 c.1678T>C synonymous_variant 1.0
rpoC 765052 c.1683C>G synonymous_variant 1.0
rpoC 765053 c.1684_1686delTCCinsAGT synonymous_variant 1.0
rpoC 765065 c.1696C>T synonymous_variant 1.0
rpoC 765073 c.1704G>C synonymous_variant 1.0
rpoC 765076 c.1707A>G synonymous_variant 1.0
rpoC 765079 c.1710T>C synonymous_variant 1.0
rpoC 765082 c.1713G>C synonymous_variant 1.0
rpoC 765089 c.1720T>C synonymous_variant 1.0
rpoC 765103 c.1734G>A synonymous_variant 1.0
rpoC 765121 c.1752G>T synonymous_variant 1.0
rpoC 765316 c.1947G>A synonymous_variant 1.0
rpoC 765319 c.1950A>G synonymous_variant 1.0
rpoC 765328 p.His653Gln missense_variant 1.0
rpoC 765330 p.Ser654Asn missense_variant 1.0
rpoC 765334 c.1965C>T synonymous_variant 1.0
rpoC 765352 c.1983G>C synonymous_variant 1.0
rpoC 765367 c.1998C>G synonymous_variant 1.0
rpoC 765370 c.2001G>C synonymous_variant 1.0
rpoC 765383 p.Met672Leu missense_variant 1.0
rpoC 765391 c.2022C>T synonymous_variant 1.0
rpoC 765406 c.2037G>T synonymous_variant 1.0
rpoC 765409 c.2040T>C synonymous_variant 1.0
rpoC 765412 c.2043T>C synonymous_variant 1.0
rpoC 765421 c.2052C>G synonymous_variant 1.0
rpoC 765578 c.2209C>T synonymous_variant 1.0
rpoC 765622 p.Glu751Asp missense_variant 1.0
rpoC 765625 c.2256C>T synonymous_variant 1.0
rpoC 765628 c.2259G>C synonymous_variant 1.0
rpoC 765658 c.2289C>T synonymous_variant 1.0
rpoC 765728 p.Gln787Lys missense_variant 1.0
rpoC 765772 c.2403C>G synonymous_variant 1.0
rpoC 765784 c.2415C>G synonymous_variant 1.0
rpoC 765790 c.2421C>T synonymous_variant 1.0
rpoC 765793 c.2424C>G synonymous_variant 1.0
rpoC 765796 c.2427C>T synonymous_variant 1.0
rpoC 765811 c.2442T>A synonymous_variant 1.0
rpoC 765814 c.2445A>G synonymous_variant 1.0
rpoC 765826 c.2457T>C synonymous_variant 1.0
rpoC 765835 c.2466C>T synonymous_variant 1.0
rpoC 765883 c.2514C>G synonymous_variant 1.0
rpoC 765886 c.2517C>G synonymous_variant 1.0
rpoC 765892 c.2523T>C synonymous_variant 1.0
rpoC 765934 c.2565C>T synonymous_variant 1.0
rpoC 765967 c.2598C>T synonymous_variant 1.0
rpoC 765982 c.2613C>G synonymous_variant 1.0
rpoC 765994 c.2625A>T synonymous_variant 1.0
rpoC 766012 c.2643C>G synonymous_variant 1.0
rpoC 766021 c.2652G>C synonymous_variant 1.0
rpoC 766288 c.2919C>G synonymous_variant 1.0
rpoC 766309 c.2940G>A synonymous_variant 1.0
rpoC 766315 c.2946C>G synonymous_variant 1.0
rpoC 766321 c.2952C>G synonymous_variant 1.0
rpoC 766348 c.2979A>G synonymous_variant 1.0
rpoC 766369 c.3000C>G synonymous_variant 1.0
rpoC 766381 c.3012C>T synonymous_variant 1.0
rpoC 766384 c.3015A>G synonymous_variant 1.0
rpoC 766393 c.3024C>G synonymous_variant 1.0
rpoC 766402 c.3033C>G synonymous_variant 1.0
rpoC 766408 c.3039C>T synonymous_variant 1.0
rpoC 766426 c.3057C>T synonymous_variant 1.0
rpoC 766456 c.3087C>G synonymous_variant 1.0
rpoC 766486 c.3117A>G synonymous_variant 1.0
rpoC 766492 c.3123T>C synonymous_variant 1.0
rpoC 766522 c.3153C>G synonymous_variant 1.0
rpoC 766528 c.3159T>C synonymous_variant 1.0
rpoC 766530 p.Arg1054Gln missense_variant 1.0
rpoC 766549 c.3180G>C synonymous_variant 1.0
rpoC 766573 c.3204T>C synonymous_variant 1.0
rpoC 766585 c.3216T>C synonymous_variant 1.0
rpoC 766594 c.3225G>C synonymous_variant 1.0
rpoC 766607 p.Ile1080Leu missense_variant 1.0
rpoC 766630 c.3261G>C synonymous_variant 1.0
rpoC 766660 c.3291G>A synonymous_variant 1.0
rpoC 766666 c.3297C>G synonymous_variant 1.0
rpoC 766672 c.3303T>C synonymous_variant 1.0
rpoC 766675 c.3306C>G synonymous_variant 1.0
rpoC 766700 c.3331C>T synonymous_variant 1.0
rpoC 766726 c.3357T>C synonymous_variant 1.0
rpoC 766733 c.3364C>T synonymous_variant 1.0
rpoC 766738 c.3369G>C synonymous_variant 1.0
rpoC 766741 c.3372G>C synonymous_variant 1.0
rpoC 766750 c.3381C>G synonymous_variant 1.0
rpoC 766765 c.3396A>C synonymous_variant 0.97
rpoC 766774 c.3405T>C synonymous_variant 1.0
rpoC 766798 c.3429C>G synonymous_variant 1.0
rpoC 766801 c.3432C>G synonymous_variant 1.0
rpoC 766804 c.3435A>G synonymous_variant 1.0
rpoC 766843 c.3474T>G synonymous_variant 1.0
rpoC 766864 c.3495G>C synonymous_variant 1.0
rpoC 766876 c.3507C>T synonymous_variant 1.0
rpoC 766883 p.Ser1172Ala missense_variant 1.0
rpoC 766894 c.3525T>C synonymous_variant 1.0
rpoC 766895 c.3526T>C synonymous_variant 1.0
rpoC 766918 c.3549C>T synonymous_variant 1.0
rpoC 766933 c.3564A>G synonymous_variant 1.0
rpoC 766945 c.3576A>G synonymous_variant 1.0
rpoC 766963 c.3594T>C synonymous_variant 1.0
rpoC 766996 c.3627C>G synonymous_variant 1.0
rpoC 767002 c.3633G>C synonymous_variant 1.0
rpoC 767009 c.3640_3642delTCGinsAGC synonymous_variant 1.0
rpoC 767014 c.3645G>C synonymous_variant 1.0
rpoC 767033 c.3664_3666delTCGinsAGT synonymous_variant 1.0
rpoC 767059 c.3690T>G synonymous_variant 1.0
rpoC 767062 c.3693C>A synonymous_variant 1.0
rpoC 767098 c.3729T>C synonymous_variant 1.0
rpoC 767119 c.3750A>G synonymous_variant 1.0
rpoC 767134 c.3765C>A synonymous_variant 1.0
rpoC 767149 c.3780C>T synonymous_variant 1.0
rpoC 767158 c.3789T>A synonymous_variant 1.0
rpoC 767167 c.3798C>G synonymous_variant 1.0
rpoC 767180 p.Ala1271Gln missense_variant 1.0
rpoC 767191 c.3822C>G synonymous_variant 1.0
rpoC 767206 c.3837C>G synonymous_variant 1.0
rpoC 767209 c.3840T>C synonymous_variant 1.0
rpoC 767221 c.3852C>G synonymous_variant 1.0
rpoC 767230 c.3861G>C synonymous_variant 1.0
rpoC 767233 c.3864T>C synonymous_variant 1.0
mmpL5 775937 c.2544G>C synonymous_variant 1.0
mmpL5 775940 c.2541C>T synonymous_variant 1.0
mmpL5 775943 c.2538C>G synonymous_variant 1.0
mmpL5 775946 c.2535C>G synonymous_variant 1.0
mmpL5 775951 c.2530C>T synonymous_variant 1.0
mmpL5 775961 c.2520C>G synonymous_variant 1.0
mmpL5 775966 p.Ala839Ser missense_variant 1.0
mmpL5 775975 c.2506T>C synonymous_variant 1.0
mmpL5 775981 p.Leu834Met missense_variant 1.0
rpsL 781751 c.192G>C synonymous_variant 1.0
rpsL 781754 c.195G>C synonymous_variant 1.0
rpsL 781760 c.201T>C synonymous_variant 1.0
rpsL 781766 c.207C>T synonymous_variant 1.0
rpsL 781772 c.213C>G synonymous_variant 1.0
rpsL 781793 c.234G>C synonymous_variant 1.0
rpsL 781808 c.249C>T synonymous_variant 1.0
rpsL 781832 c.273T>G synonymous_variant 1.0
rpsL 781835 c.276T>C synonymous_variant 1.0
rpsL 781859 c.300T>G synonymous_variant 1.0
rpsL 781865 c.306G>C synonymous_variant 1.0
rpsL 781868 c.309T>C synonymous_variant 1.0
rpsL 781871 c.312G>C synonymous_variant 1.0
rpsL 781883 c.324G>A synonymous_variant 1.0
rpsL 781886 c.327C>T synonymous_variant 1.0
rpsL 781892 c.333A>G synonymous_variant 1.0
rpsL 781898 c.339A>T synonymous_variant 1.0
rpsL 781916 c.357T>C synonymous_variant 1.0
rpsL 781929 p.Gly124Ser missense_variant 1.0
rpsL 781933 c.374G>A splice_region_variant&stop_retained_variant 1.0
rplC 800612 c.-197A>G upstream_gene_variant 1.0
rplC 800618 c.-191T>C upstream_gene_variant 1.0
rplC 800621 c.-188G>A upstream_gene_variant 1.0
rplC 800627 c.-182C>T upstream_gene_variant 1.0
fbiC 1303488 c.558G>C synonymous_variant 1.0
fbiC 1303506 c.576C>T synonymous_variant 1.0
fbiC 1303512 c.582T>C synonymous_variant 1.0
fbiC 1303534 p.Ser202Ala missense_variant 1.0
fbiC 1303538 p.Arg203Leu missense_variant 1.0
fbiC 1303545 c.615A>G synonymous_variant 0.97
fbiC 1303575 c.645G>C synonymous_variant 1.0
fbiC 1303578 c.648G>A synonymous_variant 1.0
fbiC 1303584 c.654C>G synonymous_variant 1.0
fbiC 1303596 c.666G>C synonymous_variant 1.0
fbiC 1303605 c.675C>G synonymous_variant 1.0
fbiC 1303608 c.678G>A synonymous_variant 1.0
fbiC 1303614 c.684C>T synonymous_variant 1.0
fbiC 1303617 c.687C>G synonymous_variant 1.0
fbiC 1303620 c.690C>T synonymous_variant 1.0
fbiC 1303629 c.699C>T synonymous_variant 1.0
fbiC 1303632 c.702T>G synonymous_variant 1.0
fbiC 1303659 c.729T>C synonymous_variant 1.0
fbiC 1303661 p.Val244Ala missense_variant 1.0
fbiC 1303674 c.744C>G synonymous_variant 1.0
fbiC 1303686 c.756C>G synonymous_variant 1.0
fbiC 1303704 c.774T>C synonymous_variant 1.0
fbiC 1303708 c.778T>C synonymous_variant 1.0
fbiC 1303729 c.799_801delCTAinsTTG synonymous_variant 1.0
fbiC 1303732 p.Ser268Ala missense_variant 1.0
fbiC 1303737 c.807G>A synonymous_variant 1.0
fbiC 1303746 c.816T>C synonymous_variant 1.0
fbiC 1303750 c.820_822delTTAinsCTG synonymous_variant 1.0
fbiC 1303755 c.825T>C synonymous_variant 1.0
fbiC 1303800 c.870G>C synonymous_variant 1.0
fbiC 1303812 c.882C>T synonymous_variant 1.0
fbiC 1303818 c.888C>G synonymous_variant 1.0
fbiC 1303825 p.Glu299Gln missense_variant 1.0
fbiC 1304472 c.1542T>C synonymous_variant 0.91
fbiC 1304478 c.1548G>C synonymous_variant 0.92
fbiC 1304481 c.1551T>G synonymous_variant 0.92
fbiC 1304496 c.1566T>A synonymous_variant 1.0
fbiC 1304499 c.1569T>G synonymous_variant 0.94
fbiC 1304502 c.1572G>C synonymous_variant 0.95
fbiC 1304526 c.1596T>G synonymous_variant 0.95
fbiC 1304532 c.1602G>C synonymous_variant 0.95
fbiC 1304533 c.1603T>C synonymous_variant 0.95
fbiC 1304541 c.1611C>G synonymous_variant 0.95
fbiC 1304544 c.1614T>C synonymous_variant 0.95
fbiC 1304546 p.Val539Ala missense_variant 0.95
fbiC 1304559 p.Glu543Asp missense_variant 1.0
fbiC 1304565 c.1635C>G synonymous_variant 1.0
fbiC 1304568 c.1638T>C synonymous_variant 1.0
fbiC 1304574 c.1644C>G synonymous_variant 1.0
fbiC 1304580 c.1650T>C synonymous_variant 1.0
fbiC 1304610 c.1680C>G synonymous_variant 1.0
fbiC 1304613 c.1683T>A synonymous_variant 1.0
fbiC 1304625 c.1695C>T synonymous_variant 1.0
fbiC 1304634 c.1704C>G synonymous_variant 1.0
fbiC 1304640 c.1710A>C synonymous_variant 1.0
fbiC 1304646 c.1716T>C synonymous_variant 1.0
fbiC 1304658 c.1728C>G synonymous_variant 1.0
fbiC 1304670 c.1740G>C synonymous_variant 1.0
fbiC 1304672 p.Val581Ala missense_variant 1.0
fbiC 1304674 p.Gly582Gln missense_variant 1.0
fbiC 1304694 c.1764A>C synonymous_variant 0.9
fbiC 1304915 p.Asp662Gly missense_variant 0.92
fbiC 1304928 c.1998T>C synonymous_variant 0.93
fbiC 1304934 c.2004C>G synonymous_variant 0.93
fbiC 1304937 c.2007G>C synonymous_variant 0.93
fbiC 1304946 c.2016G>C synonymous_variant 0.93
fbiC 1304955 c.2025G>A synonymous_variant 0.93
fbiC 1304958 c.2028T>G synonymous_variant 0.93
fbiC 1304982 c.2052G>A synonymous_variant 1.0
atpE 1460855 c.-190T>C upstream_gene_variant 1.0
rrs 1472445 n.601_604delTCTC non_coding_transcript_exon_variant 1.0
rrs 1472451 n.606_607insCGGG non_coding_transcript_exon_variant 1.0
rrs 1472460 n.615T>C non_coding_transcript_exon_variant 1.0
rrs 1472461 n.616G>C non_coding_transcript_exon_variant 1.0
rrs 1472463 n.618G>C non_coding_transcript_exon_variant 1.0
rrs 1472464 n.619A>G non_coding_transcript_exon_variant 1.0
rrs 1472489 n.644A>G non_coding_transcript_exon_variant 1.0
rrs 1473105 n.1260G>A non_coding_transcript_exon_variant 1.0
rrs 1473123 n.1278delAinsTT non_coding_transcript_exon_variant 1.0
rrs 1473288 n.1443C>T non_coding_transcript_exon_variant 1.0
rrs 1473290 n.1445C>T non_coding_transcript_exon_variant 1.0
rrs 1473291 n.1446G>T non_coding_transcript_exon_variant 1.0
rrl 1473758 n.101G>T non_coding_transcript_exon_variant 1.0
rrl 1473797 n.140G>T non_coding_transcript_exon_variant 1.0
rrl 1473806 n.149C>T non_coding_transcript_exon_variant 1.0
rrl 1473813 n.156C>T non_coding_transcript_exon_variant 1.0
rrl 1473831 n.174G>A non_coding_transcript_exon_variant 1.0
rrl 1473876 n.219G>A non_coding_transcript_exon_variant 1.0
rrl 1473887 n.230T>A non_coding_transcript_exon_variant 1.0
rrl 1473888 n.231T>A non_coding_transcript_exon_variant 1.0
rrl 1473899 n.242A>T non_coding_transcript_exon_variant 1.0
rrl 1473918 n.261C>T non_coding_transcript_exon_variant 1.0
rrl 1473924 n.267_268insT non_coding_transcript_exon_variant 1.0
rrl 1473943 n.286G>C non_coding_transcript_exon_variant 1.0
rrl 1473945 n.288T>A non_coding_transcript_exon_variant 1.0
rrl 1473946 n.289A>T non_coding_transcript_exon_variant 1.0
rrl 1473981 n.324delGinsAT non_coding_transcript_exon_variant 1.0
rrl 1473986 n.329T>C non_coding_transcript_exon_variant 1.0
rrl 1473994 n.337C>T non_coding_transcript_exon_variant 1.0
rrl 1473995 n.338G>T non_coding_transcript_exon_variant 1.0
rrl 1474001 n.344C>T non_coding_transcript_exon_variant 1.0
rrl 1474009 n.352A>G non_coding_transcript_exon_variant 1.0
rrl 1474011 n.354G>A non_coding_transcript_exon_variant 1.0
rrl 1474018 n.361G>A non_coding_transcript_exon_variant 1.0
rrl 1474030 n.373G>A non_coding_transcript_exon_variant 1.0
rrl 1474061 n.404T>C non_coding_transcript_exon_variant 1.0
rrl 1474089 n.432C>T non_coding_transcript_exon_variant 1.0
rrl 1474093 n.436G>A non_coding_transcript_exon_variant 1.0
rrl 1474100 n.443C>T non_coding_transcript_exon_variant 1.0
rrl 1474103 n.446A>T non_coding_transcript_exon_variant 1.0
rrl 1474110 n.453A>C non_coding_transcript_exon_variant 1.0
rrl 1474111 n.454T>C non_coding_transcript_exon_variant 1.0
rrl 1474130 n.473C>T non_coding_transcript_exon_variant 1.0
rrl 1474140 n.483C>T non_coding_transcript_exon_variant 1.0
rrl 1474151 n.494C>T non_coding_transcript_exon_variant 1.0
rrl 1474181 n.524C>T non_coding_transcript_exon_variant 1.0
rrl 1474249 n.592G>T non_coding_transcript_exon_variant 1.0
rrl 1474291 n.635_649delTTCCTCTCCGGAGGA non_coding_transcript_exon_variant 1.0
rrl 1474308 n.651G>T non_coding_transcript_exon_variant 1.0
rrl 1474310 n.653T>G non_coding_transcript_exon_variant 1.0
rrl 1474717 n.1060A>T non_coding_transcript_exon_variant 1.0
rrl 1474753 n.1096A>G non_coding_transcript_exon_variant 1.0
rrl 1474760 n.1103A>G non_coding_transcript_exon_variant 1.0
rrl 1474783 n.1126G>A non_coding_transcript_exon_variant 1.0
rrl 1474794 n.1137C>T non_coding_transcript_exon_variant 1.0
rrl 1474812 n.1155G>A non_coding_transcript_exon_variant 1.0
rrl 1474831 n.1174A>G non_coding_transcript_exon_variant 1.0
rrl 1475419 n.1762C>T non_coding_transcript_exon_variant 1.0
rrl 1475429 n.1772G>A non_coding_transcript_exon_variant 1.0
rrl 1475453 n.1796T>A non_coding_transcript_exon_variant 1.0
rrl 1475480 n.1823A>G non_coding_transcript_exon_variant 1.0
rrl 1475483 n.1826C>T non_coding_transcript_exon_variant 1.0
rrl 1475487 n.1830C>T non_coding_transcript_exon_variant 1.0
rrl 1475505 n.1848G>A non_coding_transcript_exon_variant 1.0
rrl 1475526 n.1869C>A non_coding_transcript_exon_variant 1.0
rrl 1475599 n.1942A>G non_coding_transcript_exon_variant 1.0
rrl 1475604 n.1947A>C non_coding_transcript_exon_variant 1.0
rrl 1475605 n.1948A>T non_coding_transcript_exon_variant 1.0
rrl 1475608 n.1951T>C non_coding_transcript_exon_variant 1.0
rrl 1475617 n.1960C>G non_coding_transcript_exon_variant 1.0
rrl 1475625 n.1968G>C non_coding_transcript_exon_variant 1.0
rrl 1475637 n.1980T>A non_coding_transcript_exon_variant 1.0
rrl 1475642 n.1985T>C non_coding_transcript_exon_variant 1.0
rrl 1475657 n.2000A>G non_coding_transcript_exon_variant 1.0
rrl 1475659 n.2002G>A non_coding_transcript_exon_variant 1.0
rrl 1475760 n.2103C>T non_coding_transcript_exon_variant 1.0
rrl 1475763 n.2106C>T non_coding_transcript_exon_variant 1.0
rrl 1475881 n.2224T>C non_coding_transcript_exon_variant 0.97
rrl 1475988 n.2331A>G non_coding_transcript_exon_variant 0.97
rrl 1475999 n.2342G>T non_coding_transcript_exon_variant 0.93
rrl 1476030 n.2373A>G non_coding_transcript_exon_variant 0.95
rrl 1476032 n.2375C>T non_coding_transcript_exon_variant 0.91
rrl 1476033 n.2376T>C non_coding_transcript_exon_variant 0.91
rrl 1476034 n.2377C>G non_coding_transcript_exon_variant 0.95
rrl 1476045 n.2388G>C non_coding_transcript_exon_variant 0.96
rrl 1476047 n.2390G>A non_coding_transcript_exon_variant 0.95
rrl 1476049 n.2392C>T non_coding_transcript_exon_variant 0.96
rrl 1476077 n.2420T>C non_coding_transcript_exon_variant 0.95
rrl 1476086 n.2429G>A non_coding_transcript_exon_variant 0.96
rrl 1476089 n.2432T>C non_coding_transcript_exon_variant 0.95
rrl 1476095 n.2438C>T non_coding_transcript_exon_variant 0.95
rrl 1476105 n.2448_2449delGAinsT non_coding_transcript_exon_variant 0.95
rrl 1476115 n.2458T>C non_coding_transcript_exon_variant 0.96
rrl 1476214 n.2557G>T non_coding_transcript_exon_variant 0.97
rrl 1476215 n.2558C>T non_coding_transcript_exon_variant 1.0
rrl 1476251 n.2594T>C non_coding_transcript_exon_variant 1.0
rrl 1476580 n.2923G>A non_coding_transcript_exon_variant 1.0
rrl 1476619 n.2962C>T non_coding_transcript_exon_variant 1.0
rrl 1476628 n.2971T>A non_coding_transcript_exon_variant 1.0
rrl 1476689 n.3032A>T non_coding_transcript_exon_variant 1.0
rrl 1476690 n.3033C>T non_coding_transcript_exon_variant 1.0
rrl 1476693 n.3036G>A non_coding_transcript_exon_variant 1.0
rrl 1476695 n.3038T>A non_coding_transcript_exon_variant 1.0
rrl 1476716 n.3059A>C non_coding_transcript_exon_variant 1.0
rrl 1476723 n.3066T>A non_coding_transcript_exon_variant 1.0
rrl 1476725 n.3068C>T non_coding_transcript_exon_variant 1.0
rrl 1476726 n.3069A>G non_coding_transcript_exon_variant 1.0
rrl 1476732 n.3075T>C non_coding_transcript_exon_variant 1.0
rrl 1476750 n.3093T>C non_coding_transcript_exon_variant 1.0
rrl 1476755 n.3098G>A non_coding_transcript_exon_variant 1.0
rrl 1476759 n.3102T>C non_coding_transcript_exon_variant 1.0
inhA 1674549 c.348G>C synonymous_variant 1.0
inhA 1674555 c.354G>A synonymous_variant 1.0
inhA 1674561 c.360C>T synonymous_variant 1.0
inhA 1674585 c.384T>C synonymous_variant 1.0
inhA 1674588 c.387G>A synonymous_variant 1.0
inhA 1674589 p.Met130Leu missense_variant 1.0
inhA 1674601 p.Leu134Val missense_variant 1.0
inhA 1674618 c.417C>T synonymous_variant 1.0
inhA 1674619 p.Pro140Ser missense_variant 1.0
inhA 1674624 c.423A>T synonymous_variant 1.0
inhA 1674627 c.426T>C synonymous_variant 1.0
inhA 1674655 c.454_456delAGCinsTCG synonymous_variant 1.0
inhA 1674669 c.468G>C synonymous_variant 1.0
inhA 1674687 c.486G>A synonymous_variant 1.0
inhA 1674717 c.516C>T synonymous_variant 1.0
inhA 1674718 c.517A>C synonymous_variant 1.0
inhA 1674729 c.528G>A synonymous_variant 1.0
inhA 1674745 p.Tyr182Ala missense_variant 1.0
inhA 1674756 c.555T>C synonymous_variant 1.0
inhA 1674759 c.558G>C synonymous_variant 1.0
inhA 1674765 c.564C>T synonymous_variant 1.0
inhA 1674774 c.573A>C synonymous_variant 1.0
inhA 1674777 c.576C>A synonymous_variant 1.0
inhA 1674780 c.579T>G synonymous_variant 1.0
inhA 1674792 c.591G>C synonymous_variant 1.0
inhA 1674801 c.600T>C synonymous_variant 1.0
inhA 1674820 c.619_621delCTCinsTTG synonymous_variant 1.0
inhA 1674828 c.627G>A synonymous_variant 1.0
inhA 1674846 p.Ile215Met missense_variant 1.0
inhA 1674870 c.669T>C synonymous_variant 1.0
inhA 1674876 c.675C>G synonymous_variant 1.0
inhA 1674879 c.678T>C synonymous_variant 1.0
inhA 1674888 c.687C>T synonymous_variant 1.0
inhA 1674904 p.Ala235Pro missense_variant 1.0
inhA 1674909 c.708G>C synonymous_variant 1.0
inhA 1674915 c.714C>G synonymous_variant 1.0
inhA 1674939 c.738G>A synonymous_variant 1.0
inhA 1674942 c.741T>C synonymous_variant 1.0
inhA 1674966 c.765T>C synonymous_variant 1.0
inhA 1674967 p.Asp256Thr missense_variant 0.96
inhA 1674993 c.792G>C synonymous_variant 1.0
inhA 1674994 p.His265Ser missense_variant 1.0
inhA 1675006 c.805_807delCTCinsTTG synonymous_variant 1.0
rpsA 1833532 c.-10A>C upstream_gene_variant 1.0
rpsA 1833568 c.27G>C synonymous_variant 1.0
rpsA 1833589 c.48A>T synonymous_variant 0.97
rpsA 1833595 c.54T>C synonymous_variant 0.95
rpsA 1833613 c.72C>A synonymous_variant 0.96
rpsA 1833619 c.78A>C synonymous_variant 0.96
rpsA 1833661 c.120A>G synonymous_variant 0.97
rpsA 1833667 c.126C>G synonymous_variant 0.96
rpsA 1833703 c.162C>T synonymous_variant 0.96
rpsA 1833724 c.183C>G synonymous_variant 0.95
rpsA 1833727 c.186G>C synonymous_variant 0.95
rpsA 1833745 c.204G>C synonymous_variant 1.0
rpsA 1833760 c.219C>T synonymous_variant 1.0
rpsA 1833790 c.249T>C synonymous_variant 1.0
rpsA 1833793 c.252C>T synonymous_variant 1.0
rpsA 1833802 c.261A>G synonymous_variant 1.0
rpsA 1833808 c.267G>C synonymous_variant 1.0
rpsA 1833811 c.270G>T synonymous_variant 1.0
rpsA 1833832 c.291G>A synonymous_variant 1.0
rpsA 1833838 c.297G>C synonymous_variant 1.0
rpsA 1833841 c.300C>G synonymous_variant 1.0
rpsA 1833847 c.306C>G synonymous_variant 1.0
rpsA 1833856 c.315A>G synonymous_variant 1.0
rpsA 1833859 c.318C>T synonymous_variant 0.98
rpsA 1833874 c.333T>C synonymous_variant 1.0
rpsA 1833895 c.354G>C synonymous_variant 1.0
rpsA 1833928 c.387G>C synonymous_variant 1.0
rpsA 1833949 c.408T>C synonymous_variant 1.0
rpsA 1833970 c.429G>A synonymous_variant 1.0
rpsA 1833979 c.438T>C synonymous_variant 0.94
rpsA 1834000 c.459G>C synonymous_variant 1.0
rpsA 1834015 c.474G>C synonymous_variant 1.0
rpsA 1834021 c.480C>T synonymous_variant 1.0
rpsA 1834102 c.561T>C synonymous_variant 1.0
rpsA 1834105 c.564C>T synonymous_variant 1.0
rpsA 1834150 c.609G>C synonymous_variant 1.0
rpsA 1834153 c.612T>C synonymous_variant 1.0
rpsA 1834154 p.Asn205Gln missense_variant 1.0
rpsA 1834157 c.616T>C synonymous_variant 1.0
rpsA 1834162 c.621A>G synonymous_variant 1.0
rpsA 1834165 c.624A>G synonymous_variant 1.0
rpsA 1834177 c.636A>C synonymous_variant 1.0
rpsA 1834186 c.645C>G synonymous_variant 1.0
rpsA 1834189 c.648G>C synonymous_variant 1.0
rpsA 1834195 c.654G>C synonymous_variant 1.0
rpsA 1834222 c.681T>C synonymous_variant 1.0
rpsA 1834225 c.684C>G synonymous_variant 1.0
rpsA 1834231 c.690T>G synonymous_variant 1.0
rpsA 1834249 c.708T>C synonymous_variant 1.0
rpsA 1834261 c.720A>G synonymous_variant 1.0
rpsA 1834264 c.723G>C synonymous_variant 1.0
rpsA 1834297 c.756C>T synonymous_variant 1.0
rpsA 1834303 c.762T>G synonymous_variant 1.0
rpsA 1834336 c.795C>G synonymous_variant 1.0
rpsA 1834348 c.807T>C synonymous_variant 1.0
rpsA 1834366 c.825A>G synonymous_variant 1.0
rpsA 1834375 c.834G>A synonymous_variant 1.0
rpsA 1834396 c.855G>C synonymous_variant 1.0
rpsA 1834411 c.870T>C synonymous_variant 1.0
rpsA 1834423 c.882G>T synonymous_variant 1.0
rpsA 1834451 c.910T>C synonymous_variant 1.0
rpsA 1834456 c.915T>G synonymous_variant 1.0
rpsA 1834465 c.924T>C synonymous_variant 1.0
rpsA 1834468 c.927A>G synonymous_variant 1.0
rpsA 1834474 c.933C>T synonymous_variant 1.0
rpsA 1834489 c.948T>C synonymous_variant 1.0
rpsA 1834546 c.1005T>C synonymous_variant 1.0
rpsA 1834555 c.1014T>G synonymous_variant 1.0
rpsA 1834603 c.1062G>A synonymous_variant 1.0
rpsA 1834609 c.1068T>C synonymous_variant 1.0
rpsA 1834612 c.1071G>A synonymous_variant 1.0
rpsA 1834633 c.1092A>G synonymous_variant 1.0
rpsA 1834639 c.1098T>C synonymous_variant 1.0
rpsA 1834654 c.1113G>A synonymous_variant 1.0
rpsA 1834690 c.1149T>C synonymous_variant 1.0
rpsA 1834699 p.Glu386Asp missense_variant 1.0
rpsA 1834732 c.1191T>C synonymous_variant 1.0
rpsA 1834747 c.1206A>G synonymous_variant 1.0
rpsA 1834751 p.Leu404Met missense_variant 1.0
rpsA 1834756 c.1215G>A synonymous_variant 1.0
rpsA 1834759 c.1218A>C synonymous_variant 1.0
rpsA 1834765 p.Glu408Asp missense_variant 1.0
rpsA 1834766 p.Lys409Ala missense_variant 1.0
rpsA 1834775 p.Ala412Gln missense_variant 1.0
rpsA 1834780 c.1239A>G synonymous_variant 1.0
rpsA 1834789 c.1248T>C synonymous_variant 1.0
rpsA 1834792 c.1251G>C synonymous_variant 1.0
ndh 2102836 c.207T>C synonymous_variant 1.0
ndh 2102842 c.201A>G synonymous_variant 1.0
ndh 2102845 c.198A>C synonymous_variant 1.0
ndh 2102857 c.186T>C synonymous_variant 1.0
ndh 2102863 c.180C>T synonymous_variant 1.0
ndh 2102869 c.174G>T synonymous_variant 1.0
ndh 2102872 c.171A>G synonymous_variant 1.0
ndh 2102878 c.165G>C synonymous_variant 1.0
ndh 2102883 c.160C>T synonymous_variant 1.0
ndh 2102895 c.148C>T synonymous_variant 1.0
ndh 2102902 c.141C>G synonymous_variant 1.0
ndh 2102908 c.135C>G synonymous_variant 1.0
ndh 2102914 c.129C>T synonymous_variant 1.0
ndh 2102919 c.124C>T synonymous_variant 1.0
ndh 2102929 c.114T>C synonymous_variant 1.0
ndh 2102938 p.Arg35His missense_variant 1.0
ndh 2102959 c.84C>T synonymous_variant 1.0
ndh 2102962 c.81A>C synonymous_variant 1.0
kasA 2517941 c.-174C>G upstream_gene_variant 1.0
kasA 2517950 c.-165C>G upstream_gene_variant 1.0
kasA 2517962 c.-153C>G upstream_gene_variant 1.0
kasA 2517965 c.-150C>T upstream_gene_variant 1.0
kasA 2517974 c.-141T>C upstream_gene_variant 1.0
kasA 2517983 c.-132T>C upstream_gene_variant 1.0
kasA 2517989 c.-126T>G upstream_gene_variant 1.0
kasA 2517993 c.-122G>T upstream_gene_variant 1.0
kasA 2518019 c.-96A>G upstream_gene_variant 1.0
kasA 2518025 c.-90G>C upstream_gene_variant 1.0
kasA 2518519 c.405G>C synonymous_variant 1.0
kasA 2518528 c.414C>G synonymous_variant 1.0
kasA 2518534 c.420G>C synonymous_variant 1.0
kasA 2518561 c.447T>C synonymous_variant 1.0
kasA 2518567 c.453G>C synonymous_variant 1.0
kasA 2518570 c.456G>C synonymous_variant 1.0
kasA 2518573 c.459G>C synonymous_variant 1.0
kasA 2518574 p.Ile154Val missense_variant 1.0
kasA 2518582 c.468G>C synonymous_variant 1.0
kasA 2518583 p.Gln157Glu missense_variant 1.0
kasA 2518594 c.480C>T synonymous_variant 1.0
kasA 2518597 c.483C>G synonymous_variant 1.0
kasA 2518606 c.492G>C synonymous_variant 0.93
kasA 2518609 p.Met165Ile missense_variant 0.93
kasA 2518636 c.522C>A synonymous_variant 1.0
kasA 2518639 c.525G>C synonymous_variant 1.0
kasA 2518642 c.528A>G synonymous_variant 1.0
kasA 2518645 c.531G>C synonymous_variant 1.0
kasA 2518651 c.537C>G synonymous_variant 1.0
kasA 2518657 c.543G>C synonymous_variant 1.0
kasA 2518663 c.549T>G synonymous_variant 1.0
pepQ 2859824 p.Asn199His missense_variant 1.0
pepQ 2859825 p.Ala198Pro missense_variant 1.0
pepQ 2859828 c.591G>A synonymous_variant 1.0
pepQ 2859833 p.Ala196Ser missense_variant 1.0
pepQ 2859834 c.585T>G synonymous_variant 1.0
Rv2752c 3064998 c.1194A>C synonymous_variant 1.0
Rv2752c 3065040 c.1150_1152delCTCinsTTG synonymous_variant 1.0
Rv2752c 3065049 c.1143G>A synonymous_variant 1.0
Rv2752c 3065055 c.1137T>G synonymous_variant 1.0
Rv2752c 3065064 c.1128G>C synonymous_variant 1.0
Rv2752c 3065070 c.1122C>A synonymous_variant 1.0
Rv2752c 3065073 c.1119C>G synonymous_variant 1.0
Rv2752c 3065085 c.1105_1107delAGGinsCGC synonymous_variant 1.0
Rv2752c 3065097 c.1095C>T synonymous_variant 1.0
Rv2752c 3065109 c.1081_1083delAGAinsCGG synonymous_variant 1.0
Rv2752c 3065130 c.1062A>G synonymous_variant 1.0
Rv2752c 3065133 c.1059T>C synonymous_variant 1.0
Rv2752c 3065142 c.1050A>C synonymous_variant 1.0
Rv2752c 3065146 p.Phe349Tyr missense_variant 1.0
Rv2752c 3065154 c.1038G>A synonymous_variant 1.0
Rv2752c 3065186 c.1006T>C synonymous_variant 1.0
Rv2752c 3065190 p.Ile334Val missense_variant 1.0
Rv2752c 3065199 c.993T>C synonymous_variant 1.0
Rv2752c 3065202 c.990T>G synonymous_variant 1.0
Rv2752c 3065205 c.987T>C synonymous_variant 1.0
Rv2752c 3065210 c.982T>C synonymous_variant 1.0
Rv2752c 3065223 c.969T>C synonymous_variant 1.0
Rv2752c 3065229 c.963G>C synonymous_variant 1.0
Rv2752c 3065232 c.960T>C synonymous_variant 1.0
Rv2752c 3065235 c.957G>C synonymous_variant 1.0
Rv2752c 3065241 c.951A>G synonymous_variant 1.0
thyA 3073839 c.633T>C synonymous_variant 1.0
thyA 3073925 c.547T>C synonymous_variant 1.0
thyA 3073929 c.543T>C synonymous_variant 1.0
thyA 3073944 c.528C>T synonymous_variant 1.0
thyA 3073953 c.519T>C synonymous_variant 1.0
thyA 3073956 c.516G>C synonymous_variant 1.0
thyA 3073959 c.513T>C synonymous_variant 1.0
thyA 3073968 c.504C>G synonymous_variant 1.0
thyA 3073977 c.495A>G synonymous_variant 1.0
thyA 3073989 c.483T>C synonymous_variant 1.0
thyA 3074001 c.471C>G synonymous_variant 1.0
thyA 3074004 c.468T>C synonymous_variant 1.0
thyA 3074037 c.435C>G synonymous_variant 1.0
thyA 3074274 c.198T>C synonymous_variant 1.0
thyA 3074280 c.192C>T synonymous_variant 1.0
thyA 3074297 c.175C>T synonymous_variant 1.0
thyA 3074301 c.171C>T synonymous_variant 1.0
thyA 3074305 p.Ala56Val missense_variant 1.0
thyA 3074307 c.165A>G synonymous_variant 1.0
thyA 3074313 c.159A>G synonymous_variant 1.0
thyA 3074316 p.Phe52Leu missense_variant 1.0
thyA 3074322 c.150C>G synonymous_variant 1.0
thyA 3074325 c.147A>G synonymous_variant 1.0
thyA 3074334 c.138T>C synonymous_variant 1.0
thyA 3074337 c.135C>G synonymous_variant 1.0
thyA 3074360 c.112T>C synonymous_variant 1.0
thyA 3074361 c.111T>C synonymous_variant 1.0
thyA 3074364 c.108T>C synonymous_variant 1.0
thyA 3074372 p.Met34Leu missense_variant 1.0
thyA 3074373 c.99G>A synonymous_variant 1.0
fprA 3473812 c.-195G>A upstream_gene_variant 1.0
fprA 3473823 c.-184G>T upstream_gene_variant 1.0
alr 3840476 c.945A>C synonymous_variant 1.0
alr 3840502 p.Leu307Val missense_variant 1.0
alr 3840503 p.Asn306Thr missense_variant 1.0
alr 3840515 p.Pro302Glu missense_variant 1.0
alr 3840518 c.903G>C synonymous_variant 1.0
alr 3840523 p.Ile300Val missense_variant 1.0
alr 3840527 c.894A>C synonymous_variant 1.0
alr 3840534 p.Gly296Ala missense_variant 1.0
alr 3840542 c.879G>A synonymous_variant 1.0
alr 3840548 c.873G>A synonymous_variant 1.0
alr 3840551 c.870G>T synonymous_variant 1.0
alr 3840554 c.867G>C synonymous_variant 1.0
alr 3840562 p.Ile287Val missense_variant 1.0
alr 3840566 c.855A>G synonymous_variant 1.0
alr 3840574 c.847C>T synonymous_variant 1.0
alr 3840578 c.843T>G synonymous_variant 1.0
alr 3840599 c.822G>C synonymous_variant 1.0
rpoA 3877515 c.993G>C synonymous_variant 1.0
rpoA 3877557 c.951C>G synonymous_variant 1.0
rpoA 3877587 c.921A>C synonymous_variant 1.0
rpoA 3877613 p.Ile299Val missense_variant 1.0
rpoA 3877617 c.891G>C synonymous_variant 1.0
rpoA 3877638 c.870T>G synonymous_variant 1.0
rpoA 3877656 c.852T>C synonymous_variant 1.0
rpoA 3877677 p.Ala277Ser missense_variant 1.0
rpoA 3877680 c.828G>C synonymous_variant 1.0
rpoA 3877685 c.823C>T synonymous_variant 1.0
rpoA 3877686 c.822A>G synonymous_variant 1.0
rpoA 3877692 c.816G>C synonymous_variant 1.0
rpoA 3877704 c.804G>T synonymous_variant 1.0
rpoA 3877737 c.771G>C synonymous_variant 1.0
rpoA 3877743 c.765T>C synonymous_variant 1.0
rpoA 3877758 c.750G>C synonymous_variant 1.0
rpoA 3877764 c.744C>G synonymous_variant 1.0
rpoA 3877770 c.738A>G synonymous_variant 1.0
rpoA 3877776 c.732T>C synonymous_variant 1.0
rpoA 3877782 c.726T>C synonymous_variant 1.0
rpoA 3877815 c.693C>T synonymous_variant 1.0
rpoA 3877830 c.678C>T synonymous_variant 1.0
rpoA 3877839 c.669G>C synonymous_variant 1.0
rpoA 3877851 c.657C>T synonymous_variant 1.0
rpoA 3877857 c.651G>A synonymous_variant 1.0
rpoA 3877865 c.643C>T synonymous_variant 1.0
rpoA 3877866 c.642G>C synonymous_variant 1.0
rpoA 3877872 c.636C>T synonymous_variant 1.0
rpoA 3877875 c.633T>C synonymous_variant 1.0
rpoA 3877887 c.621G>C synonymous_variant 1.0
rpoA 3877900 p.Ser203Thr missense_variant 1.0
rpoA 3877905 c.603A>G synonymous_variant 1.0
rpoA 3877908 p.Asn200Ser missense_variant 1.0
rpoA 3877920 c.588G>C synonymous_variant 1.0
rpoA 3877962 c.546G>T synonymous_variant 1.0
rpoA 3877968 c.540C>G synonymous_variant 1.0
rpoA 3877989 c.519A>G synonymous_variant 1.0
rpoA 3878001 c.507A>G synonymous_variant 1.0
rpoA 3878022 c.486T>C synonymous_variant 1.0
rpoA 3878025 c.483C>T synonymous_variant 1.0
rpoA 3878028 c.480G>C synonymous_variant 1.0
rpoA 3878031 c.477T>C synonymous_variant 1.0
rpoA 3878043 c.465G>C synonymous_variant 1.0
rpoA 3878046 c.462T>G synonymous_variant 1.0
rpoA 3878055 c.453A>G synonymous_variant 1.0
rpoA 3878061 c.447G>C synonymous_variant 1.0
rpoA 3878067 c.441C>G synonymous_variant 1.0
rpoA 3878070 c.438T>C synonymous_variant 1.0
rpoA 3878082 c.426T>C synonymous_variant 1.0
rpoA 3878097 c.411G>A synonymous_variant 0.98
rpoA 3878103 c.405A>G synonymous_variant 1.0
rpoA 3878106 c.402G>C synonymous_variant 1.0
rpoA 3878118 c.390T>C synonymous_variant 1.0
rpoA 3878130 c.378C>G synonymous_variant 1.0
rpoA 3878145 c.363C>G synonymous_variant 1.0
rpoA 3878157 c.351C>G synonymous_variant 1.0
rpoA 3878166 c.342C>G synonymous_variant 1.0
rpoA 3878169 c.339G>C synonymous_variant 1.0
rpoA 3878184 c.324C>T synonymous_variant 0.97
rpoA 3878187 c.321C>G synonymous_variant 1.0
rpoA 3878193 c.315T>C synonymous_variant 1.0
rpoA 3878205 c.303T>G synonymous_variant 1.0
rpoA 3878217 c.291A>G synonymous_variant 1.0
rpoA 3878229 c.279C>G synonymous_variant 1.0
rpoA 3878247 c.261G>C synonymous_variant 1.0
rpoA 3878256 c.252G>C synonymous_variant 1.0
rpoA 3878264 p.Ser82Gly missense_variant 1.0
rpoA 3878271 c.237T>C synonymous_variant 1.0
rpoA 3878283 p.Glu75Asp missense_variant 1.0
rpoA 3878295 c.213A>G synonymous_variant 1.0
rpoA 3878298 c.210A>G synonymous_variant 1.0
rpoA 3878304 c.204G>C synonymous_variant 1.0
rpoA 3878313 c.195G>C synonymous_variant 1.0
rpoA 3878322 c.186A>G synonymous_variant 1.0
rpoA 3878331 c.177A>C synonymous_variant 1.0
rpoA 3878334 c.174T>C synonymous_variant 1.0
rpoA 3878337 c.171T>C synonymous_variant 1.0
rpoA 3878346 c.162T>C synonymous_variant 1.0
rpoA 3878364 c.144A>C synonymous_variant 1.0
rpoA 3878370 c.138T>C synonymous_variant 1.0
rpoA 3878376 c.132G>C synonymous_variant 1.0
rpoA 3878384 c.124C>T synonymous_variant 1.0
rpoA 3878385 c.123C>G synonymous_variant 1.0
rpoA 3878391 c.117T>G synonymous_variant 0.98
rpoA 3878415 c.93C>T synonymous_variant 1.0
rpoA 3878418 c.90C>T synonymous_variant 1.0
rpoA 3878442 c.66G>C synonymous_variant 1.0
rpoA 3878454 c.54A>G synonymous_variant 1.0
rpoA 3878458 p.Asn17Ser missense_variant 1.0
rpoA 3878471 p.Val13Leu missense_variant 1.0
rpoA 3878472 p.Asp12Glu missense_variant 1.0
rpoA 3878484 c.24C>A synonymous_variant 1.0
rpoA 3878490 c.18C>A synonymous_variant 1.0
rpoA 3878496 c.12A>T synonymous_variant 1.0
clpC1 4038320 c.2385G>C synonymous_variant 1.0
clpC1 4038329 p.Glu792Asp missense_variant 1.0
clpC1 4038338 c.2367C>T synonymous_variant 1.0
clpC1 4038347 c.2358G>C synonymous_variant 1.0
clpC1 4038356 c.2349T>C synonymous_variant 1.0
clpC1 4038359 c.2346A>G synonymous_variant 1.0
clpC1 4038368 c.2337T>C synonymous_variant 1.0
clpC1 4038388 c.2317T>C synonymous_variant 1.0
clpC1 4038398 c.2307G>T synonymous_variant 1.0
clpC1 4038403 c.2302T>C synonymous_variant 1.0
clpC1 4038425 c.2280C>A synonymous_variant 1.0
clpC1 4038444 p.Ala754Lys missense_variant 1.0
clpC1 4038446 c.2259T>C synonymous_variant 1.0
clpC1 4038456 p.Val750Glu missense_variant 1.0
clpC1 4038486 p.Gly740Asn missense_variant 1.0
clpC1 4038491 c.2214C>T synonymous_variant 1.0
clpC1 4038502 p.Ile735Val missense_variant 1.0
clpC1 4038508 c.2197C>T synonymous_variant 1.0
clpC1 4038518 c.2187G>T synonymous_variant 1.0
clpC1 4038530 p.Glu725Asp missense_variant 1.0
clpC1 4038537 p.Thr723Ser missense_variant 1.0
clpC1 4038539 c.2166G>C synonymous_variant 1.0
clpC1 4038569 c.2136C>T synonymous_variant 1.0
clpC1 4038575 c.2130C>G synonymous_variant 1.0
clpC1 4038596 c.2109A>G synonymous_variant 1.0
clpC1 4038620 c.2085G>A synonymous_variant 1.0
clpC1 4038623 c.2082A>G synonymous_variant 1.0
clpC1 4038653 c.2052C>T synonymous_variant 0.95
clpC1 4038658 p.Lys683Gln missense_variant 1.0
clpC1 4038661 p.Ser682Thr missense_variant 1.0
clpC1 4038662 c.2043T>C synonymous_variant 1.0
clpC1 4038665 c.2040C>G synonymous_variant 1.0
clpC1 4038668 c.2037G>C synonymous_variant 1.0
clpC1 4038671 c.2034T>C synonymous_variant 1.0
clpC1 4038677 c.2028G>C synonymous_variant 1.0
clpC1 4038683 c.2022T>C synonymous_variant 1.0
clpC1 4038692 c.2013C>G synonymous_variant 1.0
clpC1 4038695 c.2010C>G synonymous_variant 1.0
clpC1 4038698 c.2007C>T synonymous_variant 1.0
clpC1 4038701 c.2004G>C synonymous_variant 1.0
clpC1 4038704 c.2001T>C synonymous_variant 1.0
clpC1 4038713 c.1992T>C synonymous_variant 1.0
clpC1 4038740 c.1965G>C synonymous_variant 1.0
clpC1 4038749 c.1956C>T synonymous_variant 1.0
clpC1 4038773 c.1932T>C synonymous_variant 1.0
clpC1 4038782 c.1923G>T synonymous_variant 1.0
clpC1 4038790 c.1915C>T synonymous_variant 1.0
clpC1 4038809 c.1896G>A synonymous_variant 1.0
clpC1 4038812 c.1893T>C synonymous_variant 1.0
clpC1 4038875 c.1830C>G synonymous_variant 1.0
clpC1 4038878 c.1827A>G synonymous_variant 1.0
clpC1 4038884 c.1821C>T synonymous_variant 1.0
clpC1 4038893 c.1812C>T synonymous_variant 1.0
clpC1 4038908 c.1797C>G synonymous_variant 1.0
clpC1 4038914 c.1791G>C synonymous_variant 1.0
clpC1 4038953 c.1752A>G synonymous_variant 1.0
clpC1 4038956 c.1749T>C synonymous_variant 1.0
clpC1 4038965 c.1740T>C synonymous_variant 1.0
clpC1 4038971 c.1734T>C synonymous_variant 1.0
clpC1 4038974 c.1731T>C synonymous_variant 1.0
clpC1 4038989 c.1716T>C synonymous_variant 1.0
clpC1 4038997 c.1708T>C synonymous_variant 1.0
clpC1 4039004 c.1701C>G synonymous_variant 1.0
clpC1 4039022 c.1683A>G synonymous_variant 1.0
clpC1 4039025 c.1680C>G synonymous_variant 1.0
clpC1 4039526 c.1179G>A synonymous_variant 1.0
clpC1 4039532 c.1173C>T synonymous_variant 1.0
clpC1 4039547 c.1158C>G synonymous_variant 1.0
clpC1 4039553 c.1152C>A synonymous_variant 1.0
clpC1 4039562 c.1143C>G synonymous_variant 1.0
clpC1 4039565 c.1140G>C synonymous_variant 1.0
clpC1 4039576 p.Ala377Ser missense_variant 1.0
clpC1 4039577 c.1128T>C synonymous_variant 1.0
clpC1 4039583 c.1122C>T synonymous_variant 1.0
clpC1 4039622 c.1083C>T synonymous_variant 1.0
clpC1 4039670 c.1035G>C synonymous_variant 1.0
clpC1 4039724 c.981A>G synonymous_variant 1.0
clpC1 4039733 c.972G>C synonymous_variant 1.0
clpC1 4039739 c.966C>G synonymous_variant 1.0
clpC1 4039742 c.963C>T synonymous_variant 1.0
clpC1 4039748 c.957G>A synonymous_variant 1.0
clpC1 4039751 c.954A>G synonymous_variant 1.0
clpC1 4039766 c.939T>C synonymous_variant 1.0
clpC1 4039769 c.936C>G synonymous_variant 1.0
clpC1 4039775 c.930G>C synonymous_variant 1.0
clpC1 4039778 c.927A>G synonymous_variant 1.0
clpC1 4039781 c.924G>C synonymous_variant 1.0
clpC1 4039787 c.916_918delTCGinsAGC synonymous_variant 1.0
clpC1 4039796 c.909C>T synonymous_variant 1.0
clpC1 4039805 c.900C>G synonymous_variant 1.0
clpC1 4039817 c.888A>T synonymous_variant 1.0
clpC1 4039820 c.885T>C synonymous_variant 1.0
clpC1 4039850 c.855T>C synonymous_variant 1.0
clpC1 4039865 c.840T>C synonymous_variant 1.0
clpC1 4039880 c.825G>A synonymous_variant 1.0
clpC1 4039898 c.807C>G synonymous_variant 1.0
clpC1 4039919 c.786C>T synonymous_variant 1.0
clpC1 4039931 c.774T>C synonymous_variant 1.0
clpC1 4039937 c.768G>C synonymous_variant 1.0
clpC1 4039943 c.762G>C synonymous_variant 1.0
clpC1 4039946 c.759A>C synonymous_variant 1.0
clpC1 4039949 c.756G>C synonymous_variant 1.0
clpC1 4039952 c.753T>C synonymous_variant 1.0
clpC1 4039955 c.750G>T synonymous_variant 1.0
clpC1 4039958 c.747G>C synonymous_variant 1.0
clpC1 4039964 c.741C>T synonymous_variant 1.0
clpC1 4040000 c.705C>T synonymous_variant 1.0
clpC1 4040015 c.690G>A synonymous_variant 1.0
clpC1 4040021 c.684A>C synonymous_variant 1.0
clpC1 4040033 c.672G>C synonymous_variant 1.0
clpC1 4040090 c.613_615delTCTinsAGC synonymous_variant 1.0
clpC1 4040093 c.612C>G synonymous_variant 1.0
clpC1 4040105 c.600C>G synonymous_variant 1.0
clpC1 4040147 c.558A>G synonymous_variant 1.0
clpC1 4040162 c.543G>C synonymous_variant 1.0
clpC1 4040165 c.540G>C synonymous_variant 1.0
clpC1 4040171 c.534C>G synonymous_variant 1.0
clpC1 4040195 c.510G>T synonymous_variant 1.0
clpC1 4040200 c.505T>C synonymous_variant 1.0
clpC1 4040201 c.504C>G synonymous_variant 1.0
clpC1 4040204 c.501G>C synonymous_variant 1.0
clpC1 4040207 c.498T>C synonymous_variant 1.0
clpC1 4040213 c.490_492delTCTinsAGC synonymous_variant 1.0
clpC1 4040225 c.480A>C synonymous_variant 1.0
clpC1 4040228 c.477G>C synonymous_variant 1.0
clpC1 4040231 c.474C>T synonymous_variant 1.0
clpC1 4040246 c.459C>G synonymous_variant 1.0
clpC1 4040249 c.456A>G synonymous_variant 1.0
clpC1 4040267 c.438A>G synonymous_variant 1.0
clpC1 4040273 c.432T>C synonymous_variant 1.0
clpC1 4040291 c.414G>C synonymous_variant 1.0
clpC1 4040309 c.396C>T synonymous_variant 1.0
clpC1 4040342 c.363C>G synonymous_variant 1.0
clpC1 4040348 c.357G>C synonymous_variant 1.0
clpC1 4040354 c.351A>G synonymous_variant 1.0
clpC1 4040357 c.348T>C synonymous_variant 1.0
clpC1 4040363 c.342A>C synonymous_variant 1.0
clpC1 4040369 c.336C>G synonymous_variant 1.0
clpC1 4040375 c.330G>C synonymous_variant 1.0
clpC1 4040380 c.325T>C synonymous_variant 1.0
clpC1 4040387 c.318A>G synonymous_variant 1.0
clpC1 4040393 c.312G>C synonymous_variant 1.0
clpC1 4040480 c.225T>C synonymous_variant 1.0
clpC1 4040486 c.219G>C synonymous_variant 1.0
clpC1 4040495 c.210C>A synonymous_variant 1.0
clpC1 4040522 c.183T>C synonymous_variant 1.0
clpC1 4040525 c.180C>T synonymous_variant 1.0
clpC1 4040528 c.177G>C synonymous_variant 1.0
clpC1 4040531 c.174T>C synonymous_variant 1.0
clpC1 4040534 c.171A>G synonymous_variant 1.0
clpC1 4040537 c.168G>C synonymous_variant 1.0
clpC1 4040551 c.154T>C synonymous_variant 1.0
clpC1 4040561 c.144A>G synonymous_variant 1.0
clpC1 4040573 c.132T>A synonymous_variant 1.0
clpC1 4040579 c.126A>G synonymous_variant 1.0
clpC1 4040582 c.123G>C synonymous_variant 1.0
clpC1 4040588 c.117T>C synonymous_variant 1.0
clpC1 4040591 c.114C>T synonymous_variant 1.0
clpC1 4040597 c.108C>T synonymous_variant 1.0
clpC1 4040600 c.103_105delTTAinsCTG synonymous_variant 1.0
clpC1 4040603 c.102T>G synonymous_variant 1.0
clpC1 4040606 c.99T>C synonymous_variant 1.0
embC 4240747 c.885C>T synonymous_variant 1.0
embC 4240759 c.897C>G synonymous_variant 1.0
embC 4240765 c.903C>G synonymous_variant 1.0
embB 4247425 c.912G>C synonymous_variant 1.0
embB 4247437 c.924A>G synonymous_variant 1.0
embB 4247452 c.939C>G synonymous_variant 1.0
embB 4247470 c.957T>C synonymous_variant 1.0
embB 4247497 c.984T>C synonymous_variant 1.0
embB 4247500 c.987C>G synonymous_variant 1.0
embB 4247506 c.993C>G synonymous_variant 1.0
embB 4247512 c.999T>C synonymous_variant 1.0
embB 4247527 c.1014G>C synonymous_variant 1.0
embB 4247539 c.1026T>C synonymous_variant 1.0
embB 4247550 p.Ala346Asp missense_variant 1.0
embB 4247554 c.1041T>C synonymous_variant 1.0
embB 4247566 c.1053C>G synonymous_variant 1.0
embB 4247572 c.1059A>C synonymous_variant 1.0
embB 4247590 c.1077A>G synonymous_variant 1.0
embB 4247629 c.1116C>G synonymous_variant 1.0
embB 4247632 c.1119C>G synonymous_variant 1.0
embB 4247638 c.1125G>C synonymous_variant 1.0
embB 4247644 c.1131G>C synonymous_variant 1.0
embB 4247645 p.Glu378Thr missense_variant 1.0
embB 4247648 p.Ala379Ser missense_variant 1.0
embB 4247656 c.1143A>G synonymous_variant 1.0
embB 4247657 p.Pro382Ala missense_variant 1.0
embB 4247662 c.1149C>G synonymous_variant 1.0
embB 4247677 c.1164C>G synonymous_variant 1.0
embB 4247684 c.1171T>C synonymous_variant 1.0