SRR3675581
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR736867
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR12416840
|
MDR-TB
|
lineage4.9
|
None
|
SRR12708389
|
MDR-TB
|
lineage4.8.1
|
None
|
ERR363447
|
Other
|
lineage4.9
|
None
|
SRR6045706
|
Sensitive
|
lineage4.9
|
None
|
ERR4797054
|
Pre-XDR-TB
|
lineage2.1
|
None
|
ERR4407452
|
Other
|
lineage3
|
None
|
ERR373947
|
Other
|
lineage4.9
|
None
|
SRR1183111
|
HR-TB
|
lineage4.9
|
None
|
SRR23961559
|
Other
|
La1.7;lineage4.2
|
None
|
SRR3675311
|
Other
|
lineage4.9
|
None
|
SRR12416824
|
HR-TB
|
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3
|
None
|
ERR363456
|
Sensitive
|
lineage4.9
|
None
|
ERR987722
|
MDR-TB
|
|
None
|
SRR28119805
|
Other
|
lineage4.9
|
None
|
ERR234659
|
Other
|
|
None
|
ERR349264
|
Sensitive
|
lineage4.9
|
None
|
ERR502908
|
HR-TB
|
lineage2.2.1
|
None
|
ERR9786671
|
Other
|
|
None
|
SRR28119756
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR1180226
|
HR-TB
|
lineage4.9
|
None
|
ERR736865
|
HR-TB
|
lineage4.3.2;lineage4.9
|
None
|
SRR1184372
|
MDR-TB
|
|
None
|
SRR1173633
|
Other
|
lineage4.9
|
None
|
SRR5341333
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR21732980
|
Other
|
lineage4.3.3
|
None
|
ERR363500
|
Sensitive
|
lineage4.9
|
None
|
SRR1173778
|
Other
|
lineage4.9
|
None
|
SRR19304036
|
Other
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR369162
|
Other
|
lineage4.9
|
None
|
ERR11252599
|
Other
|
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3
|
None
|
ERR4810741
|
HR-TB
|
La3;lineage2.1;lineage6.3
|
None
|
SRR1172310
|
HR-TB
|
lineage4.9
|
None
|
ERR6358755
|
Other
|
lineage4.6.1.1
|
None
|
SRR3742665
|
HR-TB
|
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3
|
None
|
SRR28119717
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR3283019
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR3742657
|
Pre-XDR-TB
|
La3;M.canetti;lineage2.2.1
|
None
|
SRR1175074
|
Other
|
|
None
|
ERR363498
|
Sensitive
|
lineage4.9
|
None
|
ERR736874
|
Other
|
La3;lineage2.1;lineage4.9
|
None
|
SRR1173629
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR4811022
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR1184298
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR19303884
|
Other
|
lineage2.1;lineage6.3
|
None
|
ERR4811142
|
RR-TB
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR323039
|
HR-TB
|
La2;lineage4.9
|
None
|
SRR18909918
|
Other
|
lineage2.2.1.1
|
None
|
SRR18909918
|
Other
|
lineage2.2.1.1
|
None
|
ERR5917972
|
MDR-TB
|
lineage4.4.1.1
|
za
|
SRR16156832
|
RR-TB
|
lineage2.2;lineage4
|
None
|
ERR349300
|
Sensitive
|
lineage4.9
|
None
|
ERR363479
|
Sensitive
|
lineage4.9
|
None
|
ERR11466146
|
Other
|
lineage4.3.4.2.1
|
None
|
SRR3675448
|
Other
|
lineage4.9
|
None
|
ERR4811105
|
HR-TB
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR1174897
|
MDR-TB
|
lineage4.9;lineage9
|
None
|
ERR349265
|
Other
|
lineage4.9
|
None
|
ERR363426
|
Sensitive
|
lineage4.9
|
None
|
ERR400345
|
Other
|
lineage4.9
|
None
|
SRR28119811
|
Other
|
lineage2.2.1;lineage6.3
|
None
|
ERR363449
|
Sensitive
|
lineage4.9
|
None
|
ERR4819876
|
Other
|
lineage4.3.4.2.1
|
None
|
SRR29055629
|
MDR-TB
|
La3;lineage2.2.1
|
None
|
SRR29093105
|
Other
|
lineage2.2.2;lineage4
|
None
|
SRR29093909
|
Other
|
lineage4.9
|
None
|
SRR20970043
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6045371
|
Other
|
lineage4.9
|
None
|
ERR176793
|
Other
|
lineage4.1.1.1
|
None
|
ERR212121
|
HR-TB
|
lineage4.9;lineage6.3
|
None
|
ERR323053
|
MDR-TB
|
La2;lineage4.9;lineage9
|
None
|
ERR3804169
|
HR-TB
|
lineage4.1.3
|
None
|
ERR4800341
|
Other
|
lineage3
|
None
|
SRR1172728
|
RR-TB
|
La3
|
None
|
ERR736859
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR369160
|
Sensitive
|
lineage4.9
|
None
|
ERR3797062
|
RR-TB
|
lineage4.9
|
None
|
ERR363502
|
Other
|
lineage4.9
|
None
|
SRR7236330
|
Other
|
La1.8.1
|
None
|
SRR1173400
|
Other
|
lineage4.9
|
None
|
ERR702404
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR16156697
|
RR-TB
|
lineage2.2.1
|
None
|
ERR4769419
|
Sensitive
|
lineage4.9
|
None
|
SRR28119752
|
Other
|
lineage4.9
|
None
|
SRR13591342
|
HR-TB
|
lineage4.1.1.3
|
None
|
SRR1184346
|
HR-TB
|
lineage3.1
|
None
|
ERR176740
|
Other
|
lineage4.9
|
None
|
ERR6358991
|
HR-TB
|
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3
|
None
|
ERR349266
|
Sensitive
|
lineage4.9
|
None
|
ERR373946
|
Sensitive
|
lineage4.9
|
None
|
SRR3675472
|
Sensitive
|
lineage4.9
|
None
|
SRR6046225
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR1184294
|
Other
|
lineage4.9
|
None
|
SRR2010299
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR3283006
|
RR-TB
|
lineage4.9
|
None
|
SRR26159047
|
Other
|
lineage4.6.3;lineage4.9
|
None
|
SRR1172857
|
Other
|
|
None
|
ERR9787197
|
Other
|
|
None
|
ERR6359045
|
Other
|
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3
|
None
|
ERR176549
|
Other
|
lineage4.3.4.2.1
|
None
|
ERR363446
|
Sensitive
|
lineage4.9
|
None
|
ERR9786421
|
Other
|
lineage4.1.2.1
|
None
|
ERR9786604
|
Other
|
|
None
|
SRR1165667
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR4815310
|
Other
|
lineage2.2.1;lineage4.9
|
None
|
ERR13265528
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR23961558
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR3283036
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR4407463
|
HR-TB
|
|
None
|
ERR9787165
|
Other
|
lineage6.1.3
|
None
|
SRR1172951
|
Other
|
lineage4.9
|
None
|
SRR25827418
|
XDR-TB
|
lineage3.1;lineage9
|
None
|
ERR4808964
|
RR-TB
|
lineage2.2.1
|
None
|
SRR6046611
|
Sensitive
|
lineage4.9
|
None
|
ERR4798431
|
Sensitive
|
lineage4.1;lineage4.9
|
None
|
ERR867542
|
HR-TB
|
lineage4.2.1.1;lineage4.3.3
|
None
|
ERR987729
|
HR-TB
|
lineage3.1.2.1;lineage3.1.2.2
|
None
|
SRR1173788
|
Sensitive
|
lineage4.9
|
None
|
ERR9787139
|
Other
|
lineage6.3.1
|
None
|
ERR369163
|
Sensitive
|
lineage4.9
|
None
|
ERR736871
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4811075
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR1184388
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR4817896
|
HR-TB
|
lineage2.2.1
|
None
|
ERR3797028
|
HR-TB
|
M.canetti;lineage4.9
|
None
|
ERR736863
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR363490
|
Sensitive
|
lineage4.9
|
None
|
SRR1196494
|
MDR-TB
|
|
None
|
ERR4799547
|
HR-TB
|
lineage2.2.1
|
None
|
ERR363421
|
Sensitive
|
lineage4.9
|
None
|
ERR4815550
|
Other
|
lineage2.2;lineage4.9
|
None
|
ERR2027263
|
Other
|
lineage4
|
None
|
SRR1173706
|
Other
|
lineage4.9
|
None
|
ERR363474
|
Sensitive
|
lineage4.9
|
None
|
SRR5341470
|
MDR-TB
|
lineage4.9;lineage9
|
None
|
ERR349299
|
Other
|
lineage4.9
|
None
|
SRR1184380
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR3675524
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR3675260
|
Sensitive
|
lineage4.9
|
None
|
ERR4811311
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR363509
|
Sensitive
|
lineage4.9
|
None
|
SRR7535086
|
Other
|
|
None
|
ERR11049020
|
Other
|
lineage4.8
|
None
|
SRR28119777
|
Other
|
lineage4.9
|
None
|
SRR1172817
|
Other
|
La3
|
None
|
SRR1172234
|
Other
|
lineage4.9
|
None
|
SRR1196571
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR176751
|
Other
|
lineage4.9
|
None
|
SRR26937071
|
MDR-TB
|
La3;lineage2.2.1
|
None
|
ERR1334034
|
Other
|
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3
|
None
|
SRR5341302
|
Other
|
La3;lineage2.1;lineage4.9
|
None
|
ERR323043
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR9786645
|
Other
|
lineage4.6.2.2
|
None
|
ERR3283018
|
HR-TB
|
lineage4.9
|
None
|
SRR1184381
|
MDR-TB
|
|
None
|
SRR3675221
|
Other
|
lineage4.9
|
None
|
SRR25827682
|
Other
|
|
None
|
SRR6789621
|
Other
|
lineage4.9
|
None
|
SRR8552928
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR11465024
|
Other
|
lineage4.1.1.3
|
None
|
SRR1173363
|
Other
|
|
None
|
SRR3675572
|
Other
|
|
None
|
SRR6045503
|
Sensitive
|
lineage4.9
|
None
|
ERR502524
|
HR-TB
|
lineage4.9;lineage6.3
|
None
|
ERR3283042
|
Other
|
lineage4.9
|
None
|
SRR14782539
|
MDR-TB
|
lineage4.2.1
|
None
|
SRR1196768
|
MDR-TB
|
|
None
|
SRR1196583
|
Other
|
lineage4.9
|
None
|
SRR9971114
|
Other
|
lineage2.2.1
|
None
|
SRR29772570
|
Other
|
lineage4.9
|
None
|
SRR20969677
|
HR-TB
|
La3;lineage2
|
None
|
ERR369158
|
Other
|
lineage4.9
|
None
|
ERR502943
|
Sensitive
|
lineage2.2.1;lineage4
|
None
|
SRR18003019
|
Other
|
lineage2.2.1
|
None
|
SRR1173355
|
Other
|
lineage4.9
|
None
|
SRR1169194
|
Other
|
lineage4.9
|
None
|
SRR7496517
|
Other
|
|
None
|
ERR6866241
|
Other
|
lineage4.3.2
|
None
|
SRR1184312
|
Other
|
lineage2.2.1
|
None
|
SRR29093099
|
MDR-TB
|
La3;lineage2.2.2
|
None
|
SRR25827497
|
XDR-TB
|
lineage2.2.1;lineage3
|
None
|
SRR1173384
|
Other
|
lineage4.9
|
None
|
ERR373945
|
Sensitive
|
lineage4.9
|
None
|
ERR363437
|
Sensitive
|
lineage4.9
|
None
|
SRR13423649
|
Sensitive
|
lineage2.2.1
|
None
|
SRR11662694
|
Other
|
lineage4.9
|
None
|
SRR6789626
|
Other
|
|
None
|
SRR28119753
|
Other
|
lineage4.9
|
None
|
SRR3675209
|
Sensitive
|
lineage4.9
|
None
|
SRR3675248
|
Other
|
lineage4.9
|
None
|
SRR1196474
|
Other
|
lineage3.1.1
|
None
|
SRR1196546
|
Other
|
lineage4.9
|
None
|
SRR6458423
|
HR-TB
|
lineage2.2.1
|
None
|
ERR400336
|
Sensitive
|
lineage4.9
|
None
|
ERR363499
|
Sensitive
|
lineage4.9
|
None
|
ERR349298
|
Sensitive
|
lineage4.9
|
None
|
SRR1165699
|
Other
|
lineage4.9
|
None
|
ERR4797201
|
Other
|
lineage1.2.2.2
|
None
|
ERR13265748
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR363445
|
Other
|
lineage4.9
|
None
|
ERR702406
|
Other
|
lineage2.1
|
None
|
ERR9786611
|
HR-TB
|
lineage4.1.3
|
None
|