EBG00000313339 - n.635_649delTTCCTCTCCGGAGGA


Drug resistance types
33 Sensitive 7 RR-TB 32 HR-TB 17 MDR-TB 4 Pre-XDR-TB 2 XDR-TB 108 Other
lineage Counts
lineage Count
lineage2.1;lineage4.9 9
lineage4.9 75
lineage4.8.1 1
lineage2.1 2
lineage3 2
La1.7;lineage4.2 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
18
lineage2.2.1 12
lineage4.9;lineage6.3 9
lineage4.3.2;lineage4.9 1
lineage4.3.3 3
La3;lineage2.1;lineage4.9;lineage6.3 3
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
La3;lineage2.1;lineage6.3 1
lineage4.6.1.1 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2.2.1 1
La3;lineage2.1;lineage4.9 2
M.canetti;lineage2.1;lineage4.9 2
lineage2.1;lineage6.3 1
La2;lineage4.9 1
lineage2.2.1.1 2
lineage4.4.1.1 1
lineage2.2;lineage4 1
lineage4.3.4.2.1 3
lineage4.9;lineage9 2
lineage2.2.1;lineage6.3 1
La3;lineage2.2.1 2
lineage2.2.2;lineage4 1
lineage4.1.1.1 1
La2;lineage4.9;lineage9 1
lineage4.1.3 2
La3 2
La1.8.1 1
lineage2.1;lineage4.9;lineage6.3 6
lineage4.1.1.3 2
lineage3.1 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage4.6.3;lineage4.9 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.1.2.1 1
lineage2.2.1;lineage4.9 1
lineage6.1.3 1
lineage3.1;lineage9 1
lineage4.1;lineage4.9 1
lineage4.2.1.1;lineage4.3.3 1
lineage3.1.2.1;lineage3.1.2.2 1
lineage6.3.1 1
M.canetti;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage2.2;lineage4.9 1
lineage4 1
lineage4.8 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage4.6.2.2 1
lineage4.2.1 1
La3;lineage2 1
lineage2.2.1;lineage4 1
lineage4.3.2 1
La3;lineage2.2.2 1
lineage2.2.1;lineage3 1
lineage3.1.1 1
lineage1.2.2.2 1
spoligotype Counts
spoligotype Count
None 203
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675581 Other lineage2.1;lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR12416840 MDR-TB lineage4.9 None
SRR12708389 MDR-TB lineage4.8.1 None
ERR363447 Other lineage4.9 None
SRR6045706 Sensitive lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR4407452 Other lineage3 None
ERR373947 Other lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
SRR23961559 Other La1.7;lineage4.2 None
SRR3675311 Other lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR363456 Sensitive lineage4.9 None
ERR987722 MDR-TB None
SRR28119805 Other lineage4.9 None
ERR234659 Other None
ERR349264 Sensitive lineage4.9 None
ERR502908 HR-TB lineage2.2.1 None
ERR9786671 Other None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR1180226 HR-TB lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
SRR1184372 MDR-TB None
SRR1173633 Other lineage4.9 None
SRR5341333 Other lineage2.1;lineage4.9 None
SRR21732980 Other lineage4.3.3 None
ERR363500 Sensitive lineage4.9 None
SRR1173778 Other lineage4.9 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR369162 Other lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR1172310 HR-TB lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR1175074 Other None
ERR363498 Sensitive lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR323039 HR-TB La2;lineage4.9 None
SRR18909918 Other lineage2.2.1.1 None
SRR18909918 Other lineage2.2.1.1 None
ERR5917972 MDR-TB lineage4.4.1.1 za
SRR16156832 RR-TB lineage2.2;lineage4 None
ERR349300 Sensitive lineage4.9 None
ERR363479 Sensitive lineage4.9 None
ERR11466146 Other lineage4.3.4.2.1 None
SRR3675448 Other lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR349265 Other lineage4.9 None
ERR363426 Sensitive lineage4.9 None
ERR400345 Other lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR363449 Sensitive lineage4.9 None
ERR4819876 Other lineage4.3.4.2.1 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
SRR29093105 Other lineage2.2.2;lineage4 None
SRR29093909 Other lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR6045371 Other lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR3804169 HR-TB lineage4.1.3 None
ERR4800341 Other lineage3 None
SRR1172728 RR-TB La3 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR369160 Sensitive lineage4.9 None
ERR3797062 RR-TB lineage4.9 None
ERR363502 Other lineage4.9 None
SRR7236330 Other La1.8.1 None
SRR1173400 Other lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR16156697 RR-TB lineage2.2.1 None
ERR4769419 Sensitive lineage4.9 None
SRR28119752 Other lineage4.9 None
SRR13591342 HR-TB lineage4.1.1.3 None
SRR1184346 HR-TB lineage3.1 None
ERR176740 Other lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR349266 Sensitive lineage4.9 None
ERR373946 Sensitive lineage4.9 None
SRR3675472 Sensitive lineage4.9 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR1184294 Other lineage4.9 None
SRR2010299 MDR-TB lineage2.2.1 None
ERR3283006 RR-TB lineage4.9 None
SRR26159047 Other lineage4.6.3;lineage4.9 None
SRR1172857 Other None
ERR9787197 Other None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR176549 Other lineage4.3.4.2.1 None
ERR363446 Sensitive lineage4.9 None
ERR9786421 Other lineage4.1.2.1 None
ERR9786604 Other None
SRR1165667 Other lineage4.9;lineage6.3 None
ERR4815310 Other lineage2.2.1;lineage4.9 None
ERR13265528 Other lineage4.9;lineage6.3 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4407463 HR-TB None
ERR9787165 Other lineage6.1.3 None
SRR1172951 Other lineage4.9 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR4808964 RR-TB lineage2.2.1 None
SRR6046611 Sensitive lineage4.9 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
SRR1173788 Sensitive lineage4.9 None
ERR9787139 Other lineage6.3.1 None
ERR369163 Sensitive lineage4.9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR4817896 HR-TB lineage2.2.1 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR363490 Sensitive lineage4.9 None
SRR1196494 MDR-TB None
ERR4799547 HR-TB lineage2.2.1 None
ERR363421 Sensitive lineage4.9 None
ERR4815550 Other lineage2.2;lineage4.9 None
ERR2027263 Other lineage4 None
SRR1173706 Other lineage4.9 None
ERR363474 Sensitive lineage4.9 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR349299 Other lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR3675524 Other lineage4.9;lineage6.3 None
SRR3675260 Sensitive lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR363509 Sensitive lineage4.9 None
SRR7535086 Other None
ERR11049020 Other lineage4.8 None
SRR28119777 Other lineage4.9 None
SRR1172817 Other La3 None
SRR1172234 Other lineage4.9 None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
ERR176751 Other lineage4.9 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
ERR3283018 HR-TB lineage4.9 None
SRR1184381 MDR-TB None
SRR3675221 Other lineage4.9 None
SRR25827682 Other None
SRR6789621 Other lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR11465024 Other lineage4.1.1.3 None
SRR1173363 Other None
SRR3675572 Other None
SRR6045503 Sensitive lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR3283042 Other lineage4.9 None
SRR14782539 MDR-TB lineage4.2.1 None
SRR1196768 MDR-TB None
SRR1196583 Other lineage4.9 None
SRR9971114 Other lineage2.2.1 None
SRR29772570 Other lineage4.9 None
SRR20969677 HR-TB La3;lineage2 None
ERR369158 Other lineage4.9 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
SRR18003019 Other lineage2.2.1 None
SRR1173355 Other lineage4.9 None
SRR1169194 Other lineage4.9 None
SRR7496517 Other None
ERR6866241 Other lineage4.3.2 None
SRR1184312 Other lineage2.2.1 None
SRR29093099 MDR-TB La3;lineage2.2.2 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR1173384 Other lineage4.9 None
ERR373945 Sensitive lineage4.9 None
ERR363437 Sensitive lineage4.9 None
SRR13423649 Sensitive lineage2.2.1 None
SRR11662694 Other lineage4.9 None
SRR6789626 Other None
SRR28119753 Other lineage4.9 None
SRR3675209 Sensitive lineage4.9 None
SRR3675248 Other lineage4.9 None
SRR1196474 Other lineage3.1.1 None
SRR1196546 Other lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
ERR400336 Sensitive lineage4.9 None
ERR363499 Sensitive lineage4.9 None
ERR349298 Sensitive lineage4.9 None
SRR1165699 Other lineage4.9 None
ERR4797201 Other lineage1.2.2.2 None
ERR13265748 Other lineage4.9;lineage6.3 None
ERR363445 Other lineage4.9 None
ERR702406 Other lineage2.1 None
ERR9786611 HR-TB lineage4.1.3 None