TB-Profiler result

Run: ERR9786421
Summary

Run ID: ERR9786421

Sample name:

Date: 2025-09-15T15:38:24.776220

Number of reads: 674826

Percentage reads mapped: 88.85

Median coverage: 30.0

Strain: lineage4.1.2.1

Spoligotype:

Drug-resistance: Other

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Lineage Table: The lineage is inferred by analysing lineage specific SNPs
Lineage Family RDs Frequency
lineage4 Euro-American None 100.0
lineage4.1 Euro-American None 100.0
lineage4.1.2 Euro-American None 98.78
lineage4.1.2.1 Euro-American (Haarlem) RD182 100.0
Drug resistance: This table reports drug-resistance associated mutations found in known resistance genes
Drug Resistance Supporting mutations WHO confidence Comment
rifampicin
isoniazid
ethambutol
pyrazinamide
streptomycin rrs n.462C>T Uncertain significance Mutation from literature
fluoroquinolones
moxifloxacin
ofloxacin
levofloxacin
ciprofloxacin
aminoglycosides
amikacin
capreomycin
kanamycin
cycloserine
ethionamide
clofazimine
para-aminosalicylic_acid
delamanid
bedaquiline
linezolid
Drug resistance-Associated Mutations: This table reports mutations found in candidate resistance genes which have been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs Confidence Comment
rrs 1472307 n.462C>T non_coding_transcript_exon_variant 0.31 streptomycin Uncertain significance Mutation from literature
Non-Associated Mutations: This table reports mutations found in candidate resistance genes which have not been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs Confidence
gyrA 7362 p.Glu21Gln missense_variant 1.0 levofloxacin Not assoc w R
moxifloxacin Not assoc w R
gyrA 7585 p.Ser95Thr missense_variant 1.0 levofloxacin Not assoc w R
moxifloxacin Not assoc w R
gyrA 9304 p.Gly668Asp missense_variant 1.0 levofloxacin Not assoc w R
moxifloxacin Not assoc w R
fgd1 491256 p.Lys158Asn missense_variant 0.88 clofazimine Uncertain significance
delamanid Uncertain significance
pretomanid Uncertain significance
fgd1 491591 p.Lys270Met missense_variant 1.0 clofazimine Not assoc w R
delamanid Uncertain significance
pretomanid Uncertain significance
mshA 575679 p.Asn111Ser missense_variant 0.88 ethionamide Not assoc w R
isoniazid Not assoc w R
ccsA 619528 c.-363C>G upstream_gene_variant 0.18 amikacin Uncertain significance
capreomycin Uncertain significance
kanamycin Uncertain significance
ccsA 619531 c.-360T>C upstream_gene_variant 0.18 amikacin Uncertain significance
capreomycin Uncertain significance
kanamycin Uncertain significance
ccsA 619535 c.-356_-354delCAAinsGCG upstream_gene_variant 0.18 amikacin Uncertain significance
capreomycin Uncertain significance
kanamycin Uncertain significance
ccsA 619543 c.-348C>G upstream_gene_variant 0.18 amikacin Uncertain significance
capreomycin Uncertain significance
kanamycin Uncertain significance
ccsA 619552 c.-339A>G upstream_gene_variant 0.18 amikacin Uncertain significance
capreomycin Uncertain significance
kanamycin Uncertain significance
ccsA 619555 c.-336C>G upstream_gene_variant 0.18 amikacin Uncertain significance
capreomycin Uncertain significance
kanamycin Uncertain significance
ccsA 619561 c.-330G>C upstream_gene_variant 0.19 amikacin Uncertain significance
capreomycin Uncertain significance
kanamycin Uncertain significance
ccsA 619570 c.-321G>C upstream_gene_variant 0.2 amikacin Uncertain significance
capreomycin Uncertain significance
kanamycin Uncertain significance
ccsA 619574 c.-317G>A upstream_gene_variant 0.2 amikacin Uncertain significance
capreomycin Uncertain significance
kanamycin Uncertain significance
ccsA 619579 c.-312G>C upstream_gene_variant 0.2 amikacin Uncertain significance
capreomycin Uncertain significance
kanamycin Uncertain significance
ccsA 619584 c.-307A>T upstream_gene_variant 0.24 amikacin Uncertain significance
capreomycin Uncertain significance
kanamycin Uncertain significance
ccsA 619591 c.-300G>C upstream_gene_variant 0.27 amikacin Uncertain significance
capreomycin Uncertain significance
kanamycin Uncertain significance
ccsA 619609 c.-282G>C upstream_gene_variant 0.28 amikacin Uncertain significance
capreomycin Uncertain significance
kanamycin Uncertain significance
ccsA 619634 c.-257T>A upstream_gene_variant 0.24 amikacin Uncertain significance
capreomycin Uncertain significance
kanamycin Uncertain significance
ccsA 619645 c.-246G>C upstream_gene_variant 0.26 amikacin Uncertain significance
capreomycin Uncertain significance
kanamycin Uncertain significance
ccsA 620317 p.Val143Leu missense_variant 0.22 amikacin Uncertain significance
capreomycin Uncertain significance
kanamycin Uncertain significance
Rv0565c 657269 p.Ser68Pro missense_variant 0.87 ethionamide Uncertain significance
hadA 732295 c.366G>C synonymous_variant 0.45 isoniazid Uncertain significance
hadA 732305 p.Ile126Val missense_variant 0.45 isoniazid Uncertain significance
hadA 732308 p.Val127Ile missense_variant 0.45 isoniazid Uncertain significance
hadA 732321 p.Glu131Ala missense_variant 0.45 isoniazid Uncertain significance
hadA 732329 p.Leu134Val missense_variant 0.45 isoniazid Uncertain significance
hadA 732337 c.408G>A synonymous_variant 0.45 isoniazid Uncertain significance
hadA 732378 c.450_452dupAGA disruptive_inframe_insertion 0.5 isoniazid Uncertain significance
hadA 732396 p.Gly156Ala missense_variant 0.46 isoniazid Uncertain significance
hadA 732398 p.Ala157Thr missense_variant 0.46 isoniazid Uncertain significance
nusG 734407 p.Val52Ile missense_variant 0.27 rifampicin Uncertain significance
nusG 734421 c.168A>G synonymous_variant 0.25 rifampicin Uncertain significance
nusG 734424 c.171G>A synonymous_variant 0.24 rifampicin Uncertain significance
nusG 734442 c.189G>A synonymous_variant 0.29 rifampicin Uncertain significance
nusG 734451 c.198G>C synonymous_variant 0.31 rifampicin Uncertain significance
nusG 734457 c.204C>G synonymous_variant 0.32 rifampicin Uncertain significance
nusG 734472 c.219T>C synonymous_variant 0.32 rifampicin Uncertain significance
nusG 734475 c.222T>C synonymous_variant 0.31 rifampicin Not assoc w R - Interim
nusG 734532 c.279A>G synonymous_variant 0.26 rifampicin Not assoc w R - Interim
nusG 734556 c.303C>T synonymous_variant 0.26 rifampicin Uncertain significance
nusG 734559 c.306T>C synonymous_variant 0.28 rifampicin Uncertain significance
rpoB 760101 c.295T>C synonymous_variant 0.33 rifampicin Not assoc w R - Interim
rpoB 760112 c.306T>C synonymous_variant 0.39 rifampicin Uncertain significance
rpoB 760115 c.309C>T synonymous_variant 0.61 rifampicin Not assoc w R
rpoB 760118 c.312T>G synonymous_variant 0.47 rifampicin Not assoc w R - Interim
rpoB 760121 c.315T>C synonymous_variant 0.47 rifampicin Not assoc w R - Interim
rpoB 760130 p.Asp108Glu missense_variant 0.44 rifampicin Uncertain significance
rpoB 760139 c.333A>G synonymous_variant 0.42 rifampicin Not assoc w R - Interim
rpoB 760142 c.336C>G synonymous_variant 0.4 rifampicin Uncertain significance
rpoB 760181 c.375T>C synonymous_variant 0.52 rifampicin Not assoc w R - Interim
rpoB 760184 c.378A>G synonymous_variant 0.52 rifampicin Not assoc w R - Interim
rpoB 760196 c.390C>G synonymous_variant 0.61 rifampicin Not assoc w R - Interim
rpoB 760223 c.417T>C synonymous_variant 0.61 rifampicin Uncertain significance
rpoB 760235 c.429T>C synonymous_variant 0.53 rifampicin Not assoc w R - Interim
rpoB 760283 c.477G>C synonymous_variant 0.55 rifampicin Not assoc w R - Interim
rpoB 760298 c.492G>C synonymous_variant 0.52 rifampicin Not assoc w R - Interim
rpoB 760307 c.501T>C synonymous_variant 0.51 rifampicin Uncertain significance
rpoB 760310 c.504G>C synonymous_variant 0.51 rifampicin Uncertain significance
rpoB 760328 c.522G>C synonymous_variant 0.51 rifampicin Uncertain significance
rpoB 760331 c.525G>C synonymous_variant 0.51 rifampicin Uncertain significance
rpoB 760340 c.534G>T synonymous_variant 0.48 rifampicin Not assoc w R - Interim
rpoB 760361 c.555T>C synonymous_variant 0.48 rifampicin Not assoc w R - Interim
rpoB 760370 c.564C>G synonymous_variant 0.46 rifampicin Uncertain significance
rpoB 760376 p.Asp190Glu missense_variant 0.46 rifampicin Uncertain significance
rpoB 760380 p.Thr192Leu missense_variant 0.44 rifampicin Uncertain significance
rpoB 760406 c.600G>C synonymous_variant 0.48 rifampicin Uncertain significance
rpoB 760412 c.606C>G synonymous_variant 0.5 rifampicin Uncertain significance
rpoB 760424 c.618C>G synonymous_variant 0.48 rifampicin Not assoc w R - Interim
rpoB 760430 c.624T>C synonymous_variant 0.47 rifampicin Not assoc w R - Interim
rpoB 760475 c.669A>G synonymous_variant 0.4 rifampicin Not assoc w R - Interim
rpoB 760481 c.675G>C synonymous_variant 0.4 rifampicin Not assoc w R - Interim
rpoB 760484 c.678A>G synonymous_variant 0.37 rifampicin Not assoc w R - Interim
rpoB 760522 p.Ser239Asn missense_variant 0.31 rifampicin Uncertain significance
rpoB 760563 p.Arg253Met missense_variant 0.32 rifampicin Uncertain significance
rpoB 760591 p.Val262Ala missense_variant 0.32 rifampicin Uncertain significance
rpoB 760611 c.805T>C synonymous_variant 0.32 rifampicin Not assoc w R - Interim
rpoB 760646 c.840C>G synonymous_variant 0.4 rifampicin Not assoc w R - Interim
rpoB 760655 c.849A>G synonymous_variant 0.41 rifampicin Not assoc w R - Interim
rpoB 760661 c.855A>C synonymous_variant 0.43 rifampicin Not assoc w R - Interim
rpoB 760670 c.864G>C synonymous_variant 0.39 rifampicin Uncertain significance
rpoB 760674 c.868T>C synonymous_variant 0.45 rifampicin Not assoc w R - Interim
rpoB 760679 c.873A>G synonymous_variant 0.42 rifampicin Not assoc w R - Interim
rpoB 760683 c.877T>C synonymous_variant 0.45 rifampicin Not assoc w R - Interim
rpoB 760715 c.909C>G synonymous_variant 0.41 rifampicin Uncertain significance
rpoB 760718 c.912C>T synonymous_variant 0.4 rifampicin Uncertain significance
rpoB 760724 c.918T>C synonymous_variant 0.4 rifampicin Not assoc w R - Interim
rpoB 760730 c.924T>C synonymous_variant 0.4 rifampicin Not assoc w R - Interim
rpoB 760751 c.945G>C synonymous_variant 0.33 rifampicin Uncertain significance
rpoB 760757 c.951T>C synonymous_variant 0.3 rifampicin Uncertain significance
rpoB 760759 p.Val318Ala missense_variant 0.29 rifampicin Uncertain significance
rpoB 760928 c.1122G>C synonymous_variant 0.19 rifampicin Not assoc w R - Interim
rpoB 760934 c.1128C>T synonymous_variant 0.19 rifampicin Uncertain significance
rpoB 760946 c.1140A>G synonymous_variant 0.22 rifampicin Not assoc w R - Interim
rpoB 760949 c.1143C>T synonymous_variant 0.23 rifampicin Uncertain significance
rpoB 760982 c.1176G>C synonymous_variant 0.26 rifampicin Not assoc w R - Interim
rpoB 760985 c.1179G>C synonymous_variant 0.27 rifampicin Not assoc w R - Interim
rpoB 760991 c.1185G>C synonymous_variant 0.28 rifampicin Uncertain significance
rpoB 761006 c.1200C>G synonymous_variant 0.3 rifampicin Not assoc w R - Interim
rpoB 761015 c.1209G>C synonymous_variant 0.3 rifampicin Not assoc w R - Interim
rpoB 761021 c.1215G>C synonymous_variant 0.31 rifampicin Uncertain significance
rpoB 761027 c.1221A>G synonymous_variant 0.3 rifampicin Not assoc w R - Interim
rpoB 761036 c.1230G>C synonymous_variant 0.33 rifampicin Not assoc w R - Interim
rpoB 761037 c.1231T>C synonymous_variant 0.33 rifampicin Not assoc w R - Interim
rpoB 761057 c.1251G>C synonymous_variant 0.4 rifampicin Not assoc w R - Interim
rpoB 761102 c.1296A>G synonymous_variant 0.48 rifampicin Uncertain significance
rpoB 761129 c.1323G>C synonymous_variant 0.48 rifampicin Not assoc w R - Interim
rpoB 761132 c.1326G>T synonymous_variant 0.47 rifampicin Not assoc w R - Interim
rpoB 761133 c.1327T>C synonymous_variant 0.47 rifampicin Not assoc w R - Interim
rpoB 761150 c.1344A>C synonymous_variant 0.48 rifampicin Not assoc w R - Interim
rpoB 761153 c.1347G>C synonymous_variant 0.48 rifampicin Uncertain significance
rpoB 761165 c.1359G>C synonymous_variant 0.48 rifampicin Not assoc w R - Interim
rpoB 761180 c.1374A>C synonymous_variant 0.43 rifampicin Not assoc w R - Interim
rpoB 761189 c.1383T>C synonymous_variant 0.46 rifampicin Not assoc w R - Interim
rpoB 761195 c.1389G>C synonymous_variant 0.48 rifampicin Not assoc w R - Interim
rpoB 761207 c.1401C>T synonymous_variant 0.5 rifampicin Uncertain significance
rpoB 761213 c.1407G>C synonymous_variant 0.47 rifampicin Uncertain significance
rpoB 761219 c.1413G>C synonymous_variant 0.47 rifampicin Not assoc w R - Interim
rpoB 761249 c.1443A>G synonymous_variant 0.47 rifampicin Not assoc w R - Interim
rpoB 761255 c.1449T>G synonymous_variant 0.48 rifampicin Not assoc w R - Interim
rpoB 761261 c.1455G>T synonymous_variant 0.47 rifampicin Not assoc w R - Interim
rpoB 761306 c.1500C>G synonymous_variant 0.45 rifampicin Uncertain significance
rpoB 761312 c.1506G>C synonymous_variant 0.46 rifampicin Uncertain significance
rpoB 761327 c.1521A>G synonymous_variant 0.49 rifampicin Not assoc w R - Interim
rpoB 761330 c.1524G>C synonymous_variant 0.49 rifampicin Uncertain significance
rpoB 761354 c.1548C>T synonymous_variant 0.46 rifampicin Uncertain significance
rpoB 761360 c.1554T>C synonymous_variant 0.45 rifampicin Not assoc w R - Interim
rpoB 761362 p.Ser519Thr missense_variant 0.42 rifampicin Uncertain significance
rpoB 761373 p.Val523His missense_variant 0.37 rifampicin Uncertain significance
rpoB 761408 c.1602G>C synonymous_variant 0.4 rifampicin Uncertain significance
rpoB 761414 c.1608A>G synonymous_variant 0.39 rifampicin Not assoc w R - Interim
rpoB 761423 c.1617T>C synonymous_variant 0.36 rifampicin Uncertain significance
rpoB 761435 c.1629T>C synonymous_variant 0.35 rifampicin Uncertain significance
rpoB 761438 c.1632G>C synonymous_variant 0.35 rifampicin Uncertain significance
rpoB 761439 p.Asp545Lys missense_variant 0.35 rifampicin Uncertain significance
rpoB 761444 c.1638T>C synonymous_variant 0.34 rifampicin Uncertain significance
rpoB 761447 c.1641C>G synonymous_variant 0.34 rifampicin Uncertain significance
rpoB 761452 p.Val549Glu missense_variant 0.33 rifampicin Uncertain significance
rpoB 761457 p.Pro551Ser missense_variant 0.33 rifampicin Uncertain significance
rpoB 761477 c.1671C>G synonymous_variant 0.32 rifampicin Uncertain significance
rpoB 761492 c.1686G>C synonymous_variant 0.35 rifampicin Uncertain significance
rpoB 761510 c.1704T>C synonymous_variant 0.31 rifampicin Uncertain significance
rpoB 761537 c.1731C>G synonymous_variant 0.29 rifampicin Not assoc w R - Interim
rpoB 761570 c.1764T>C synonymous_variant 0.27 rifampicin Not assoc w R - Interim
rpoB 761573 c.1767C>G synonymous_variant 0.27 rifampicin Not assoc w R - Interim
rpoB 761579 c.1773G>C synonymous_variant 0.26 rifampicin Not assoc w R - Interim
rpoB 761588 c.1782C>T synonymous_variant 0.3 rifampicin Uncertain significance
rpoB 761606 c.1800C>G synonymous_variant 0.27 rifampicin Uncertain significance
rpoB 761636 c.1830G>T synonymous_variant 0.31 rifampicin Not assoc w R - Interim
rpoB 761639 c.1833G>A synonymous_variant 0.29 rifampicin Uncertain significance
rpoB 761645 c.1839C>G synonymous_variant 0.25 rifampicin Not assoc w R - Interim
rpoB 761648 c.1842T>C synonymous_variant 0.25 rifampicin Uncertain significance
rpoB 761657 c.1851C>G synonymous_variant 0.19 rifampicin Not assoc w R - Interim
rpoB 761675 c.1869G>C synonymous_variant 0.24 rifampicin Uncertain significance
rpoB 761720 c.1914C>G synonymous_variant 0.24 rifampicin Uncertain significance
rpoB 761723 c.1917_1919delAGAinsC frameshift_variant&missense_variant 0.22 rifampicin Uncertain significance
rpoB 761732 c.1926C>G synonymous_variant 0.24 rifampicin Not assoc w R - Interim
rpoB 761735 c.1929C>G synonymous_variant 0.24 rifampicin Uncertain significance
rpoB 761747 c.1941G>C synonymous_variant 0.26 rifampicin Uncertain significance
rpoB 761750 c.1944G>C synonymous_variant 0.26 rifampicin Uncertain significance
rpoB 761765 c.1959T>C synonymous_variant 0.27 rifampicin Uncertain significance
rpoB 761772 p.His656Ala missense_variant 0.24 rifampicin Uncertain significance
rpoB 761778 p.Asn658Asp missense_variant 0.26 rifampicin Uncertain significance
rpoB 761791 p.Arg662His missense_variant 0.25 rifampicin Uncertain significance
rpoB 761813 c.2007T>C synonymous_variant 0.3 rifampicin Uncertain significance
rpoB 761815 p.Ala670Glu missense_variant 0.3 rifampicin Uncertain significance
rpoB 761834 c.2028T>C synonymous_variant 0.4 rifampicin Uncertain significance
rpoB 761848 p.Cys681Ser missense_variant 0.45 rifampicin Uncertain significance
rpoB 761852 c.2046C>G synonymous_variant 0.45 rifampicin Uncertain significance
rpoB 761858 c.2052G>C synonymous_variant 0.48 rifampicin Uncertain significance
rpoB 761873 c.2067A>C synonymous_variant 0.53 rifampicin Uncertain significance
rpoB 761885 c.2079T>C synonymous_variant 0.53 rifampicin Uncertain significance
rpoB 761906 c.2100C>G synonymous_variant 0.49 rifampicin Uncertain significance
rpoB 761909 c.2103T>C synonymous_variant 0.49 rifampicin Uncertain significance
rpoB 761912 c.2106T>C synonymous_variant 0.49 rifampicin Uncertain significance
rpoB 761915 p.Asp703Glu missense_variant 0.49 rifampicin Uncertain significance
rpoB 761916 p.Asp704Asn missense_variant 0.49 rifampicin Uncertain significance
rpoB 761948 c.2142G>C synonymous_variant 0.53 rifampicin Not assoc w R - Interim
rpoB 761954 c.2148C>G synonymous_variant 0.52 rifampicin Not assoc w R - Interim
rpoB 762008 c.2202C>T synonymous_variant 0.48 rifampicin Not assoc w R - Interim
rpoB 762014 c.2208C>T synonymous_variant 0.5 rifampicin Uncertain significance
rpoB 762017 c.2211A>G synonymous_variant 0.5 rifampicin Not assoc w R - Interim
rpoB 762053 c.2247T>C synonymous_variant 0.49 rifampicin Not assoc w R - Interim
rpoB 762062 c.2256T>C synonymous_variant 0.45 rifampicin Not assoc w R - Interim
rpoB 762065 c.2259T>C synonymous_variant 0.43 rifampicin Not assoc w R - Interim
rpoB 762083 c.2277T>C synonymous_variant 0.41 rifampicin Not assoc w R - Interim
rpoB 762086 c.2280G>C synonymous_variant 0.4 rifampicin Not assoc w R - Interim
rpoB 762101 c.2295C>G synonymous_variant 0.4 rifampicin Not assoc w R - Interim
rpoB 762114 p.Ile770Val missense_variant 0.39 rifampicin Uncertain significance
rpoB 762131 c.2325C>G synonymous_variant 0.43 rifampicin Uncertain significance
rpoB 762140 c.2334G>C synonymous_variant 0.42 rifampicin Uncertain significance
rpoB 762143 c.2337T>C synonymous_variant 0.42 rifampicin Uncertain significance
rpoB 762149 c.2343G>C synonymous_variant 0.44 rifampicin Not assoc w R - Interim
rpoB 762167 c.2361T>C synonymous_variant 0.47 rifampicin Not assoc w R - Interim
rpoB 762176 c.2370T>C synonymous_variant 0.46 rifampicin Not assoc w R - Interim
rpoB 762185 c.2379G>C synonymous_variant 0.46 rifampicin Not assoc w R - Interim
rpoB 762206 c.2400C>G synonymous_variant 0.46 rifampicin Uncertain significance
rpoB 762233 c.2427G>C synonymous_variant 0.5 rifampicin Not assoc w R - Interim
rpoB 762246 c.2440C>T synonymous_variant 0.47 rifampicin Uncertain significance
rpoB 762254 c.2448T>G synonymous_variant 0.49 rifampicin Uncertain significance
rpoB 762257 c.2451C>G synonymous_variant 0.49 rifampicin Uncertain significance
rpoB 762266 c.2460T>C synonymous_variant 0.54 rifampicin Uncertain significance
rpoB 762284 c.2478G>C synonymous_variant 0.5 rifampicin Not assoc w R - Interim
rpoB 762293 c.2487T>C synonymous_variant 0.53 rifampicin Not assoc w R - Interim
rpoB 762314 c.2508C>T synonymous_variant 0.5 rifampicin Uncertain significance
rpoB 762317 c.2511A>G synonymous_variant 0.5 rifampicin Not assoc w R - Interim
rpoB 762329 c.2523G>C synonymous_variant 0.48 rifampicin Not assoc w R - Interim
rpoB 762338 c.2532T>C synonymous_variant 0.44 rifampicin Uncertain significance
rpoB 762347 c.2541T>C synonymous_variant 0.42 rifampicin Uncertain significance
rpoB 762362 p.Glu852Asp missense_variant 0.44 rifampicin Uncertain significance
rpoB 762369 c.2563T>C synonymous_variant 0.44 rifampicin Uncertain significance
rpoC 762398 c.-972T>C upstream_gene_variant 0.42 rifampicin Uncertain significance
rpoC 762401 c.-969G>C upstream_gene_variant 0.4 rifampicin Uncertain significance
rpoB 762404 c.2598T>C synonymous_variant 0.4 rifampicin Not assoc w R - Interim
rpoC 762410 c.-960T>C upstream_gene_variant 0.38 rifampicin Uncertain significance
rpoB 762416 c.2610A>G synonymous_variant 0.37 rifampicin Not assoc w R - Interim
rpoC 762419 c.-951C>G upstream_gene_variant 0.37 rifampicin Uncertain significance
rpoC 762434 c.-936T>C upstream_gene_variant 0.41 rifampicin Uncertain significance
rpoB 762449 c.2643C>A synonymous_variant 0.38 rifampicin Not assoc w R - Interim
rpoC 762467 c.-903C>T upstream_gene_variant 0.36 rifampicin Uncertain significance
rpoB 762488 c.2682G>C synonymous_variant 0.28 rifampicin Not assoc w R - Interim
rpoB 762489 p.Val895Gln missense_variant 0.28 rifampicin Uncertain significance
rpoC 762509 c.-861T>G upstream_gene_variant 0.29 rifampicin Uncertain significance
rpoB 762510 p.Ala902Pro missense_variant 0.29 rifampicin Uncertain significance
rpoC 762521 c.-849C>T upstream_gene_variant 0.29 rifampicin Uncertain significance
rpoB 762810 p.Ala1002Ser missense_variant 0.28 rifampicin Uncertain significance
rpoB 762813 p.Met1003Val missense_variant 0.27 rifampicin Uncertain significance
rpoB 762818 c.3012C>G synonymous_variant 0.28 rifampicin Not assoc w R - Interim
rpoB 762827 c.3021G>C synonymous_variant 0.3 rifampicin Not assoc w R - Interim
rpoB 762857 c.3051C>G synonymous_variant 0.31 rifampicin Not assoc w R - Interim
rpoB 762860 c.3054G>C synonymous_variant 0.31 rifampicin Not assoc w R - Interim
rpoB 762863 c.3057T>C synonymous_variant 0.32 rifampicin Not assoc w R - Interim
rpoB 762929 c.3123G>C synonymous_variant 0.43 rifampicin Not assoc w R - Interim
rpoC 762989 c.-381G>C upstream_gene_variant 0.6 rifampicin Uncertain significance
rpoC 763013 c.-357C>G upstream_gene_variant 0.56 rifampicin Uncertain significance
rpoB 763028 c.3222T>C synonymous_variant 0.59 rifampicin Not assoc w R - Interim
rpoB 763031 c.3225T>G synonymous_variant 0.59 rifampicin Not assoc w R - Interim
rpoB 763034 c.3228C>G synonymous_variant 0.57 rifampicin Not assoc w R - Interim
rpoB 763040 c.3234C>G synonymous_variant 0.59 rifampicin Not assoc w R - Interim
rpoB 763070 c.3264T>C synonymous_variant 0.59 rifampicin Not assoc w R - Interim
rpoB 763085 c.3279C>G synonymous_variant 0.63 rifampicin Not assoc w R - Interim
rpoB 763115 c.3309T>C synonymous_variant 0.65 rifampicin Not assoc w R - Interim
rpoB 763136 c.3330C>T synonymous_variant 0.62 rifampicin Not assoc w R - Interim
rpoC 763148 c.-222G>C upstream_gene_variant 0.61 rifampicin Uncertain significance
rpoC 763158 c.-212C>T upstream_gene_variant 0.58 rifampicin Uncertain significance
rpoB 763166 c.3360A>G synonymous_variant 0.58 rifampicin Not assoc w R - Interim
rpoC 763190 c.-180C>T upstream_gene_variant 0.53 rifampicin Uncertain significance
rpoC 763202 c.-168A>G upstream_gene_variant 0.44 rifampicin Uncertain significance
rpoC 763205 c.-165G>C upstream_gene_variant 0.44 rifampicin Uncertain significance
rpoC 763206 c.-164_-162delAGTinsTCG upstream_gene_variant 0.44 rifampicin Uncertain significance
rpoB 763214 c.3408T>C synonymous_variant 0.41 rifampicin Not assoc w R - Interim
rpoC 763226 c.-144A>G upstream_gene_variant 0.45 rifampicin Uncertain significance
rpoB 763227 c.3421C>T synonymous_variant 0.45 rifampicin Not assoc w R - Interim
rpoB 763238 c.3432T>C synonymous_variant 0.47 rifampicin Not assoc w R - Interim
rpoC 763253 c.-117G>C upstream_gene_variant 0.39 rifampicin Uncertain significance
rpoC 763256 c.-114G>A upstream_gene_variant 0.36 rifampicin Uncertain significance
rpoB 763268 c.3462C>G synonymous_variant 0.37 rifampicin Not assoc w R - Interim
rpoB 763283 c.3477T>C synonymous_variant 0.27 rifampicin Not assoc w R - Interim
rpoC 763284 c.-86C>T upstream_gene_variant 0.29 rifampicin Uncertain significance
rpoC 763351 c.-19T>C upstream_gene_variant 0.28 rifampicin Uncertain significance
rpoC 763352 c.-18T>A upstream_gene_variant 0.28 rifampicin Uncertain significance
rpoC 763402 c.33C>G synonymous_variant 0.31 rifampicin Uncertain significance
rpoC 763411 c.42T>G synonymous_variant 0.3 rifampicin Not assoc w R - Interim
rpoC 763414 c.45T>C synonymous_variant 0.3 rifampicin Uncertain significance
rpoC 763441 c.72C>T synonymous_variant 0.33 rifampicin Uncertain significance
rpoC 763444 c.75T>C synonymous_variant 0.33 rifampicin Not assoc w R - Interim
rpoC 763456 c.87A>G synonymous_variant 0.39 rifampicin Not assoc w R - Interim
rpoC 763486 c.117T>G synonymous_variant 0.41 rifampicin Uncertain significance
rpoC 763528 c.159G>A synonymous_variant 0.4 rifampicin Not assoc w R - Interim
rpoC 763546 c.177A>G synonymous_variant 0.43 rifampicin Not assoc w R - Interim
rpoC 763570 c.201G>C synonymous_variant 0.45 rifampicin Not assoc w R - Interim
rpoC 763573 c.204G>C synonymous_variant 0.44 rifampicin Not assoc w R - Interim
rpoC 763594 c.225C>T synonymous_variant 0.45 rifampicin Not assoc w R - Interim
rpoC 763633 c.264T>C synonymous_variant 0.46 rifampicin Not assoc w R - Interim
rpoC 763636 c.267T>C synonymous_variant 0.47 rifampicin Uncertain significance
rpoC 763660 c.291T>G synonymous_variant 0.45 rifampicin Not assoc w R - Interim
rpoC 763675 c.306C>G synonymous_variant 0.38 rifampicin Not assoc w R - Interim
rpoC 763696 c.327T>C synonymous_variant 0.38 rifampicin Not assoc w R - Interim
rpoC 763702 c.333C>G synonymous_variant 0.39 rifampicin Not assoc w R - Interim
rpoC 763717 c.348T>C synonymous_variant 0.39 rifampicin Not assoc w R - Interim
rpoC 763723 c.354G>C synonymous_variant 0.37 rifampicin Uncertain significance
rpoC 763732 c.363C>G synonymous_variant 0.41 rifampicin Uncertain significance
rpoC 763741 c.372C>T synonymous_variant 0.42 rifampicin Uncertain significance
rpoC 763744 c.375G>C synonymous_variant 0.43 rifampicin Uncertain significance
rpoC 763765 c.396T>C synonymous_variant 0.39 rifampicin Uncertain significance
rpoC 763774 c.405G>C synonymous_variant 0.4 rifampicin Uncertain significance
rpoC 763807 c.438T>C synonymous_variant 0.41 rifampicin Not assoc w R - Interim
rpoC 763816 c.447C>G synonymous_variant 0.38 rifampicin Uncertain significance
rpoC 763835 p.Ala156Met missense_variant 0.41 rifampicin Uncertain significance
rpoC 763853 p.Val162Ile missense_variant 0.41 rifampicin Uncertain significance
rpoC 763858 c.489A>G synonymous_variant 0.41 rifampicin Uncertain significance
rpoC 763872 p.Gly168Ala missense_variant 0.43 rifampicin Uncertain significance
rpoC 763876 p.Glu169Asp missense_variant 0.39 rifampicin Uncertain significance
rpoC 763877 c.508_510delCTAinsTTG synonymous_variant 0.39 rifampicin Uncertain significance
rpoC 763888 c.519G>C synonymous_variant 0.44 rifampicin Uncertain significance
rpoC 763891 c.522G>C synonymous_variant 0.43 rifampicin Uncertain significance
rpoC 763894 c.525A>G synonymous_variant 0.43 rifampicin Uncertain significance
rpoC 763900 c.531G>C synonymous_variant 0.46 rifampicin Not assoc w R - Interim
rpoC 763936 c.567C>G synonymous_variant 0.41 rifampicin Uncertain significance
rpoC 763945 c.576T>C synonymous_variant 0.42 rifampicin Uncertain significance
rpoC 763951 c.582G>C synonymous_variant 0.44 rifampicin Not assoc w R - Interim
rpoC 763960 c.591T>C synonymous_variant 0.44 rifampicin Not assoc w R - Interim
rpoC 763991 p.Ile208Leu missense_variant 0.42 rifampicin Uncertain significance
rpoC 763996 c.627T>C synonymous_variant 0.42 rifampicin Uncertain significance
rpoC 764002 c.633C>G synonymous_variant 0.46 rifampicin Uncertain significance
rpoC 764005 c.636G>C synonymous_variant 0.46 rifampicin Not assoc w R - Interim
rpoC 764024 c.655_657delTTGinsCTC synonymous_variant 0.42 rifampicin Uncertain significance
rpoC 764032 p.Asp221Glu missense_variant 0.42 rifampicin Uncertain significance
rpoC 764040 p.Ser224Thr missense_variant 0.4 rifampicin Uncertain significance
rpoC 764044 c.675T>C synonymous_variant 0.42 rifampicin Uncertain significance
rpoC 764059 c.690G>T synonymous_variant 0.44 rifampicin Uncertain significance
rpoC 764083 c.714A>G synonymous_variant 0.45 rifampicin Uncertain significance
rpoC 764098 c.729A>G synonymous_variant 0.37 rifampicin Not assoc w R - Interim
rpoC 764101 c.732C>G synonymous_variant 0.38 rifampicin Not assoc w R - Interim
rpoC 764102 p.Val245Ile missense_variant 0.38 rifampicin Uncertain significance
rpoC 764112 p.Tyr248Phe missense_variant 0.38 rifampicin Uncertain significance
rpoC 764116 c.747C>T synonymous_variant 0.38 rifampicin Not assoc w R - Interim
rpoC 764131 c.762T>C synonymous_variant 0.44 rifampicin Uncertain significance
rpoC 764140 c.771C>T synonymous_variant 0.43 rifampicin Not assoc w R - Interim
rpoC 764188 c.819A>G synonymous_variant 0.42 rifampicin Not assoc w R - Interim
rpoC 764195 p.Ser276Ile missense_variant 0.4 rifampicin Uncertain significance
rpoC 764203 c.834G>C synonymous_variant 0.36 rifampicin Uncertain significance
rpoC 764206 c.837T>C synonymous_variant 0.36 rifampicin Not assoc w R - Interim
rpoC 764215 c.846A>G synonymous_variant 0.36 rifampicin Uncertain significance
rpoC 764236 c.867G>A synonymous_variant 0.41 rifampicin Not assoc w R - Interim
rpoC 764248 c.879C>G synonymous_variant 0.45 rifampicin Not assoc w R - Interim
rpoC 764257 c.888G>C synonymous_variant 0.41 rifampicin Uncertain significance
rpoC 764266 c.897T>C synonymous_variant 0.42 rifampicin Uncertain significance
rpoC 764269 c.900G>C synonymous_variant 0.41 rifampicin Uncertain significance
rpoC 764272 c.903G>C synonymous_variant 0.4 rifampicin Uncertain significance
rpoC 764278 c.909A>G synonymous_variant 0.42 rifampicin Not assoc w R - Interim
rpoC 764338 c.969G>A synonymous_variant 0.47 rifampicin Not assoc w R - Interim
rpoC 764353 c.984G>C synonymous_variant 0.4 rifampicin Uncertain significance
rpoC 764365 c.996C>T synonymous_variant 0.41 rifampicin Not assoc w R - Interim
rpoC 764380 c.1011G>C synonymous_variant 0.4 rifampicin Not assoc w R - Interim
rpoC 764381 c.1012_1013delTCinsAG synonymous_variant 0.4 rifampicin Uncertain significance
rpoC 764387 c.1018_1020delTTGinsCTC synonymous_variant 0.4 rifampicin Not assoc w R - Interim
rpoC 764405 c.1036A>C synonymous_variant 0.42 rifampicin Not assoc w R - Interim
rpoC 764419 c.1050C>G synonymous_variant 0.39 rifampicin Uncertain significance
rpoC 764428 c.1059G>C synonymous_variant 0.37 rifampicin Not assoc w R - Interim
rpoC 764431 c.1062G>C synonymous_variant 0.35 rifampicin Not assoc w R - Interim
rpoC 764434 c.1065A>G synonymous_variant 0.35 rifampicin Not assoc w R - Interim
rpoC 764446 c.1077T>C synonymous_variant 0.3 rifampicin Uncertain significance
rpoC 764449 c.1080G>C synonymous_variant 0.28 rifampicin Uncertain significance
rpoC 764452 c.1083T>C synonymous_variant 0.29 rifampicin Uncertain significance
rpoC 764458 c.1089G>C synonymous_variant 0.28 rifampicin Not assoc w R - Interim
rpoC 764461 c.1092A>G synonymous_variant 0.28 rifampicin Not assoc w R - Interim
rpoC 764489 c.1120C>T synonymous_variant 0.28 rifampicin Uncertain significance
rpoC 764497 c.1128A>G synonymous_variant 0.29 rifampicin Not assoc w R - Interim
rpoC 764510 c.1141C>T synonymous_variant 0.37 rifampicin Not assoc w R - Interim
rpoC 764521 c.1152T>C synonymous_variant 0.37 rifampicin Not assoc w R - Interim
rpoC 764527 c.1158C>T synonymous_variant 0.35 rifampicin Not assoc w R - Interim
rpoC 764536 c.1167G>C synonymous_variant 0.38 rifampicin Uncertain significance
rpoC 764539 c.1170C>G synonymous_variant 0.38 rifampicin Not assoc w R - Interim
rpoC 764554 c.1185C>T synonymous_variant 0.39 rifampicin Uncertain significance
rpoC 764560 c.1191T>C synonymous_variant 0.41 rifampicin Not assoc w R - Interim
rpoC 764566 c.1197C>G synonymous_variant 0.41 rifampicin Not assoc w R - Interim
rpoC 764575 c.1206T>G synonymous_variant 0.4 rifampicin Not assoc w R - Interim
rpoC 764581 c.1212T>C synonymous_variant 0.4 rifampicin Uncertain significance
rpoC 764593 c.1224C>T synonymous_variant 0.38 rifampicin Uncertain significance
rpoC 764611 c.1242G>T synonymous_variant 0.4 rifampicin Not assoc w R - Interim
rpoC 764650 c.1281G>C synonymous_variant 0.33 rifampicin Uncertain significance
rpoC 764651 c.1282_1284delTCGinsAGC synonymous_variant 0.33 rifampicin Uncertain significance
rpoC 764752 c.1383G>C synonymous_variant 0.36 rifampicin Not assoc w R - Interim
rpoC 764764 c.1395T>C synonymous_variant 0.35 rifampicin Not assoc w R - Interim
rpoC 764809 c.1440C>T synonymous_variant 0.35 rifampicin Not assoc w R
rpoC 764815 c.1446A>G synonymous_variant 0.37 rifampicin Not assoc w R - Interim
rpoC 764827 c.1458G>C synonymous_variant 0.4 rifampicin Not assoc w R - Interim
rpoC 764858 c.1489T>C synonymous_variant 0.35 rifampicin Not assoc w R - Interim
rpoC 764872 c.1503A>G synonymous_variant 0.39 rifampicin Not assoc w R - Interim
rpoC 764888 c.1519T>C synonymous_variant 0.44 rifampicin Not assoc w R - Interim
rpoC 764911 c.1542A>G synonymous_variant 0.45 rifampicin Uncertain significance
rpoC 764932 c.1563C>A synonymous_variant 0.42 rifampicin Not assoc w R - Interim
rpoC 764935 c.1566T>C synonymous_variant 0.42 rifampicin Uncertain significance
rpoC 764948 c.1579T>C synonymous_variant 0.38 rifampicin Not assoc w R - Interim
rpoC 764968 c.1599T>C synonymous_variant 0.39 rifampicin Not assoc w R - Interim
rpoC 764995 c.1626C>G synonymous_variant 0.36 rifampicin Not assoc w R
rpoC 765019 c.1650A>G synonymous_variant 0.38 rifampicin Not assoc w R - Interim
rpoC 765034 c.1665T>C synonymous_variant 0.39 rifampicin Uncertain significance
rpoC 765040 c.1671T>C synonymous_variant 0.33 rifampicin Not assoc w R - Interim
rpoC 765041 c.1672T>C synonymous_variant 0.33 rifampicin Not assoc w R - Interim
rpoC 765047 c.1678T>C synonymous_variant 0.32 rifampicin Not assoc w R - Interim
rpoC 765053 c.1684_1685delTCinsAG synonymous_variant 0.31 rifampicin Uncertain significance
rpoC 765073 c.1704G>C synonymous_variant 0.28 rifampicin Not assoc w R - Interim
rpoC 765076 c.1707A>G synonymous_variant 0.27 rifampicin Uncertain significance
rpoC 765079 c.1710T>G synonymous_variant 0.28 rifampicin Not assoc w R - Interim
rpoC 765082 c.1713G>C synonymous_variant 0.28 rifampicin Not assoc w R - Interim
rpoC 765089 c.1720T>C synonymous_variant 0.3 rifampicin Not assoc w R - Interim
rpoC 765103 c.1734G>T synonymous_variant 0.34 rifampicin Uncertain significance
rpoC 765150 p.Gly594Glu missense_variant 0.84 rifampicin Not assoc w R
rpoC 765319 c.1950A>G synonymous_variant 0.19 rifampicin Not assoc w R - Interim
rpoC 765326 p.His653Ala missense_variant 0.21 rifampicin Uncertain significance
rpoC 765329 p.Ser654Gly missense_variant 0.21 rifampicin Uncertain significance
rpoC 765346 c.1977C>G synonymous_variant 0.22 rifampicin Uncertain significance
rpoC 765349 c.1980T>C synonymous_variant 0.28 rifampicin Not assoc w R - Interim
rpoC 765352 c.1983G>C synonymous_variant 0.27 rifampicin Not assoc w R - Interim
rpoC 765383 p.Met672Leu missense_variant 0.35 rifampicin Uncertain significance
rpoC 765404 p.Leu679Val missense_variant 0.4 rifampicin Uncertain significance
rpoC 765409 c.2040T>C synonymous_variant 0.38 rifampicin Uncertain significance
rpoC 765421 c.2052C>G synonymous_variant 0.45 rifampicin Not assoc w R - Interim
rpoC 765478 c.2109T>C synonymous_variant 0.42 rifampicin Not assoc w R - Interim
rpoC 765499 c.2130C>G synonymous_variant 0.47 rifampicin Not assoc w R - Interim
rpoC 765529 c.2160C>T synonymous_variant 0.51 rifampicin Uncertain significance
rpoC 765541 c.2172C>G synonymous_variant 0.47 rifampicin Uncertain significance
rpoC 765553 c.2184C>T synonymous_variant 0.43 rifampicin Not assoc w R - Interim
rpoC 765556 c.2187G>C synonymous_variant 0.43 rifampicin Uncertain significance
rpoC 765559 c.2190G>C synonymous_variant 0.44 rifampicin Uncertain significance
rpoC 765580 c.2211G>C synonymous_variant 0.44 rifampicin Uncertain significance
rpoC 765613 p.His748Gln missense_variant 0.47 rifampicin Uncertain significance
rpoC 765625 c.2256C>G synonymous_variant 0.44 rifampicin Not assoc w R - Interim
rpoC 765631 p.Asp754Glu missense_variant 0.44 rifampicin Uncertain significance
rpoC 765700 c.2331T>C synonymous_variant 0.52 rifampicin Not assoc w R - Interim
rpoC 765734 c.2365T>C synonymous_variant 0.44 rifampicin Not assoc w R - Interim
rpoC 765739 c.2370G>T synonymous_variant 0.43 rifampicin Uncertain significance
rpoC 765751 c.2382C>G synonymous_variant 0.4 rifampicin Uncertain significance
rpoC 765753 p.Asp795Ala missense_variant 0.4 rifampicin Uncertain significance
rpoC 765772 c.2403C>G synonymous_variant 0.4 rifampicin Uncertain significance
rpoC 765784 c.2415C>G synonymous_variant 0.44 rifampicin Uncertain significance
rpoC 765787 c.2418C>T synonymous_variant 0.42 rifampicin Uncertain significance
rpoC 765793 c.2424C>G synonymous_variant 0.42 rifampicin Uncertain significance
rpoC 765796 c.2427C>T synonymous_variant 0.42 rifampicin Uncertain significance
rpoC 765811 c.2442T>C synonymous_variant 0.44 rifampicin Not assoc w R - Interim
rpoC 765814 c.2445A>G synonymous_variant 0.44 rifampicin Not assoc w R - Interim
rpoC 765826 c.2457T>C synonymous_variant 0.4 rifampicin Not assoc w R - Interim
rpoC 765835 c.2466C>T synonymous_variant 0.38 rifampicin Not assoc w R - Interim
rpoC 765850 c.2481G>C synonymous_variant 0.35 rifampicin Not assoc w R - Interim
rpoC 765937 c.2568T>C synonymous_variant 0.23 rifampicin Not assoc w R - Interim
rpoC 765967 c.2598C>T synonymous_variant 0.23 rifampicin Not assoc w R - Interim
rpoC 765982 c.2613C>G synonymous_variant 0.26 rifampicin Uncertain significance
rpoC 765994 c.2625A>T synonymous_variant 0.27 rifampicin Not assoc w R - Interim
rpoC 766010 c.2641_2642delTCinsAG synonymous_variant 0.23 rifampicin Uncertain significance
rpoC 766021 c.2652G>C synonymous_variant 0.24 rifampicin Uncertain significance
rpoC 766027 c.2658G>C synonymous_variant 0.25 rifampicin Uncertain significance
rpoC 766030 c.2661C>G synonymous_variant 0.25 rifampicin Uncertain significance
rpoC 766036 c.2667C>T synonymous_variant 0.24 rifampicin Uncertain significance
rpoC 766043 p.Gln892Glu missense_variant 0.23 rifampicin Uncertain significance
rpoC 766054 c.2685C>G synonymous_variant 0.2 rifampicin Uncertain significance
rpoC 766082 p.Ala905Gln missense_variant 0.22 rifampicin Uncertain significance
rpoC 766096 c.2727G>C synonymous_variant 0.27 rifampicin Uncertain significance
rpoC 766129 c.2760C>G synonymous_variant 0.27 rifampicin Uncertain significance
rpoC 766135 c.2766G>A synonymous_variant 0.26 rifampicin Not assoc w R - Interim
rpoC 766141 c.2772C>T synonymous_variant 0.26 rifampicin Uncertain significance
rpoC 766142 c.2773C>T synonymous_variant 0.26 rifampicin Not assoc w R - Interim
rpoC 766258 c.2889T>C synonymous_variant 0.3 rifampicin Uncertain significance
rpoC 766273 c.2904T>C synonymous_variant 0.31 rifampicin Uncertain significance
rpoC 766274 p.Ala969Thr missense_variant 0.31 rifampicin Uncertain significance
rpoC 766280 p.Ser971Gly missense_variant 0.34 rifampicin Uncertain significance
rpoC 766288 c.2919C>G synonymous_variant 0.35 rifampicin Uncertain significance
rpoC 766303 c.2934C>T synonymous_variant 0.43 rifampicin Not assoc w R - Interim
rpoC 766312 c.2943T>G synonymous_variant 0.48 rifampicin Uncertain significance
rpoC 766327 c.2958C>A synonymous_variant 0.53 rifampicin Uncertain significance
rpoC 766345 c.2976T>C synonymous_variant 0.51 rifampicin Uncertain significance
rpoC 766348 c.2979A>G synonymous_variant 0.51 rifampicin Not assoc w R - Interim
rpoC 766357 c.2988C>T synonymous_variant 0.5 rifampicin Uncertain significance
rpoC 766363 c.2994G>C synonymous_variant 0.47 rifampicin Uncertain significance
rpoC 766381 c.3012C>T synonymous_variant 0.53 rifampicin Uncertain significance
rpoC 766384 c.3015A>G synonymous_variant 0.54 rifampicin Uncertain significance
rpoC 766408 c.3039C>G synonymous_variant 0.54 rifampicin Uncertain significance
rpoC 766411 c.3042C>G synonymous_variant 0.54 rifampicin Uncertain significance
rpoC 766426 c.3057C>T synonymous_variant 0.56 rifampicin Uncertain significance
rpoC 766447 c.3078T>C synonymous_variant 0.5 rifampicin Uncertain significance
rpoC 766462 c.3093G>C synonymous_variant 0.52 rifampicin Uncertain significance
rpoC 766483 c.3114G>C synonymous_variant 0.48 rifampicin Uncertain significance
rpoC 766484 p.Val1039Ile missense_variant 0.49 rifampicin Uncertain significance
rpoC 766492 c.3123T>C synonymous_variant 0.51 rifampicin Uncertain significance
rpoC 766522 c.3153C>G synonymous_variant 0.47 rifampicin Uncertain significance
rpoC 766528 c.3159T>C synonymous_variant 0.46 rifampicin Uncertain significance
rpoC 766531 c.3162G>C synonymous_variant 0.46 rifampicin Uncertain significance
rpoC 766540 p.Asp1057Glu missense_variant 0.42 rifampicin Uncertain significance
rpoC 766549 c.3180G>C synonymous_variant 0.37 rifampicin Uncertain significance
rpoC 766573 c.3204T>C synonymous_variant 0.36 rifampicin Uncertain significance
rpoC 766582 c.3213C>G synonymous_variant 0.34 rifampicin Uncertain significance
rpoC 766583 p.Gly1072Ser missense_variant 0.34 rifampicin Uncertain significance
rpoC 766591 c.3222A>G synonymous_variant 0.33 rifampicin Uncertain significance
rpoC 766594 c.3225G>C synonymous_variant 0.33 rifampicin Uncertain significance
rpoC 766597 c.3228C>G synonymous_variant 0.33 rifampicin Not assoc w R - Interim
rpoC 766607 p.Ile1080Leu missense_variant 0.36 rifampicin Uncertain significance
rpoC 766630 c.3261G>C synonymous_variant 0.38 rifampicin Uncertain significance
rpoC 766657 c.3288A>G synonymous_variant 0.39 rifampicin Uncertain significance
rpoC 766672 c.3303T>C synonymous_variant 0.35 rifampicin Uncertain significance
rpoC 766673 p.Gly1102Asn missense_variant 0.35 rifampicin Uncertain significance
rpoC 766726 c.3357T>C synonymous_variant 0.28 rifampicin Uncertain significance
rpoC 766738 c.3369G>C synonymous_variant 0.32 rifampicin Uncertain significance
rpoC 766765 c.3396A>C synonymous_variant 0.28 rifampicin Not assoc w R - Interim
rpoC 766774 c.3405T>C synonymous_variant 0.36 rifampicin Uncertain significance
rpoC 766801 c.3432C>G synonymous_variant 0.35 rifampicin Uncertain significance
rpoC 766804 c.3435A>G synonymous_variant 0.38 rifampicin Not assoc w R - Interim
rpoC 766861 c.3492G>C synonymous_variant 0.44 rifampicin Not assoc w R - Interim
rpoC 766864 c.3495G>C synonymous_variant 0.44 rifampicin Uncertain significance
rpoC 766900 c.3531T>C synonymous_variant 0.46 rifampicin Uncertain significance
rpoC 766933 c.3564A>G synonymous_variant 0.49 rifampicin Uncertain significance
rpoC 766945 c.3576A>G synonymous_variant 0.54 rifampicin Not assoc w R - Interim
rpoC 766963 c.3594T>C synonymous_variant 0.51 rifampicin Not assoc w R - Interim
rpoC 766972 c.3603G>C synonymous_variant 0.53 rifampicin Uncertain significance
rpoC 766996 c.3627C>T synonymous_variant 0.55 rifampicin Not assoc w R - Interim
rpoC 767009 c.3640_3642delTCGinsAGC synonymous_variant 0.52 rifampicin Uncertain significance
rpoC 767014 c.3645G>C synonymous_variant 0.53 rifampicin Uncertain significance
rpoC 767033 c.3664_3666delTCGinsAGC synonymous_variant 0.56 rifampicin Uncertain significance
rpoC 767059 c.3690T>G synonymous_variant 0.53 rifampicin Not assoc w R - Interim
rpoC 767062 c.3693C>A synonymous_variant 0.53 rifampicin Uncertain significance
rpoC 767098 c.3729T>C synonymous_variant 0.47 rifampicin Not assoc w R - Interim
rpoC 767119 c.3750A>G synonymous_variant 0.42 rifampicin Not assoc w R - Interim
rpoC 767134 c.3765C>A synonymous_variant 0.44 rifampicin Uncertain significance
rpoC 767158 c.3789T>C synonymous_variant 0.43 rifampicin Not assoc w R - Interim
rpoC 767180 p.Ala1271Gln missense_variant 0.38 rifampicin Uncertain significance
rpoC 767191 c.3822C>G synonymous_variant 0.37 rifampicin Not assoc w R - Interim
rpoC 767206 c.3837C>G synonymous_variant 0.35 rifampicin Not assoc w R - Interim
rpoC 767263 c.3894T>C synonymous_variant 0.21 rifampicin Not assoc w R - Interim
mmpL5 775639 p.Ile948Val missense_variant 1.0 bedaquiline Not assoc w R - Interim
clofazimine Not assoc w R
rpsL 781395 c.-165T>C upstream_gene_variant 1.0 streptomycin Not assoc w R
rplC 800771 c.-38C>T upstream_gene_variant 0.2 linezolid Uncertain significance
rplC 800794 c.-15A>G upstream_gene_variant 0.21 linezolid Uncertain significance
rplC 800796 c.-13A>G upstream_gene_variant 0.22 linezolid Uncertain significance
rplC 800798 c.-10_-9delGG upstream_gene_variant 0.23 linezolid Uncertain significance
rplC 800814 c.6A>G synonymous_variant 0.22 linezolid Uncertain significance
rplC 800817 c.9A>T synonymous_variant 0.23 linezolid Uncertain significance
rplC 800844 c.36T>C synonymous_variant 0.26 linezolid Uncertain significance
rplC 801195 c.387G>C synonymous_variant 0.23 linezolid Uncertain significance
rplC 801207 c.399C>T synonymous_variant 0.26 linezolid Uncertain significance
rplC 801246 c.438C>T synonymous_variant 0.34 linezolid Uncertain significance
rplC 801249 c.441T>C synonymous_variant 0.35 linezolid Uncertain significance
rplC 801255 c.447C>T synonymous_variant 0.35 linezolid Uncertain significance
rplC 801264 c.456C>T synonymous_variant 0.34 linezolid Uncertain significance
rplC 801267 c.459A>T synonymous_variant 0.34 linezolid Uncertain significance
rplC 801270 c.462T>C synonymous_variant 0.33 linezolid Uncertain significance
rplC 801276 c.468G>C synonymous_variant 0.33 linezolid Uncertain significance
rplC 801279 c.471G>C synonymous_variant 0.33 linezolid Uncertain significance
rplC 801282 c.474G>C synonymous_variant 0.34 linezolid Uncertain significance
rplC 801285 c.477G>C synonymous_variant 0.33 linezolid Uncertain significance
rplC 801300 c.492C>G synonymous_variant 0.33 linezolid Uncertain significance
rplC 801309 c.501C>G synonymous_variant 0.31 linezolid Uncertain significance
rplC 801312 c.504G>C synonymous_variant 0.31 linezolid Uncertain significance
rplC 801321 c.513C>T synonymous_variant 0.31 linezolid Not assoc w R - Interim
rplC 801324 c.516T>C synonymous_variant 0.36 linezolid Uncertain significance
rplC 801339 c.531T>C synonymous_variant 0.32 linezolid Uncertain significance
rplC 801341 p.Leu178Gln missense_variant 0.32 linezolid Uncertain significance
rplC 801348 c.540T>G synonymous_variant 0.35 linezolid Uncertain significance
rplC 801357 c.549T>C synonymous_variant 0.38 linezolid Uncertain significance
rplC 801367 p.Ala187Thr missense_variant 0.38 linezolid Uncertain significance
rplC 801402 c.594T>C synonymous_variant 0.36 linezolid Uncertain significance
rplC 801405 c.597T>C synonymous_variant 0.36 linezolid Uncertain significance
rplC 801423 c.615G>C synonymous_variant 0.24 linezolid Uncertain significance
rplC 801426 c.618C>G synonymous_variant 0.24 linezolid Uncertain significance
rplC 801427 p.Met207Val missense_variant 0.23 linezolid Uncertain significance
rplC 801438 c.630T>C synonymous_variant 0.29 linezolid Uncertain significance
rplC 801442 p.Ile212Val missense_variant 0.29 linezolid Uncertain significance
fbiC 1303575 c.645G>C synonymous_variant 0.19 clofazimine Uncertain significance
delamanid Uncertain significance
pretomanid Uncertain significance
Rv1258c 1406341 p.Tyr334His missense_variant 1.0 isoniazid Uncertain significance
pyrazinamide Uncertain significance
streptomycin Uncertain significance
rrs 1471659 n.-187C>T upstream_gene_variant 1.0 amikacin Uncertain significance
capreomycin Uncertain significance
kanamycin Uncertain significance
streptomycin Uncertain significance
rrs 1472045 n.200T>A non_coding_transcript_exon_variant 0.15 amikacin Uncertain significance
capreomycin Uncertain significance
kanamycin Uncertain significance
streptomycin Uncertain significance
rrs 1472969 n.1124A>G non_coding_transcript_exon_variant 0.31 amikacin Uncertain significance
capreomycin Uncertain significance
kanamycin Uncertain significance
streptomycin Uncertain significance
rrs 1472970 n.1125C>G non_coding_transcript_exon_variant 0.3 amikacin Uncertain significance
capreomycin Uncertain significance
kanamycin Uncertain significance
streptomycin Uncertain significance
rrs 1472977 n.1132G>C non_coding_transcript_exon_variant 0.3 amikacin Uncertain significance
capreomycin Uncertain significance
kanamycin Uncertain significance
streptomycin Uncertain significance
rrs 1472978 n.1133T>C non_coding_transcript_exon_variant 0.3 amikacin Uncertain significance
capreomycin Uncertain significance
kanamycin Uncertain significance
streptomycin Uncertain significance
rrs 1473105 n.1260G>A non_coding_transcript_exon_variant 0.38 amikacin Uncertain significance
capreomycin Uncertain significance
kanamycin Uncertain significance
streptomycin Uncertain significance
rrs 1473123 n.1278delAinsTT non_coding_transcript_exon_variant 0.38 amikacin Uncertain significance
capreomycin Uncertain significance
kanamycin Uncertain significance
streptomycin Uncertain significance
rrs 1473145 n.1300C>T non_coding_transcript_exon_variant 0.4 amikacin Uncertain significance
capreomycin Uncertain significance
kanamycin Uncertain significance
streptomycin Uncertain significance
rrs 1473166 n.1321G>A non_coding_transcript_exon_variant 0.41 amikacin Uncertain significance
capreomycin Uncertain significance
kanamycin Uncertain significance
streptomycin Uncertain significance
rrs 1473290 n.1445C>T non_coding_transcript_exon_variant 0.31 amikacin Uncertain significance
capreomycin Uncertain significance
kanamycin Uncertain significance
streptomycin Uncertain significance
rrl 1473756 n.99G>A non_coding_transcript_exon_variant 0.22 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1473758 n.101G>T non_coding_transcript_exon_variant 0.22 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1473806 n.149C>T non_coding_transcript_exon_variant 0.29 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1473877 n.220G>A non_coding_transcript_exon_variant 0.39 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1473898 n.241C>T non_coding_transcript_exon_variant 0.42 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1473943 n.286G>T non_coding_transcript_exon_variant 0.38 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1473945 n.288T>A non_coding_transcript_exon_variant 0.38 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1473946 n.289A>T non_coding_transcript_exon_variant 0.38 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1473986 n.329T>C non_coding_transcript_exon_variant 0.35 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1473987 n.330G>A non_coding_transcript_exon_variant 0.35 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1473995 n.338G>T non_coding_transcript_exon_variant 0.37 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474001 n.344C>T non_coding_transcript_exon_variant 0.32 capreomycin Not assoc w R
linezolid Not assoc w R
rrl 1474009 n.352A>G non_coding_transcript_exon_variant 0.31 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474012 n.355C>T non_coding_transcript_exon_variant 0.32 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474093 n.436G>T non_coding_transcript_exon_variant 0.35 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474099 n.442G>A non_coding_transcript_exon_variant 0.3 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474103 n.446A>T non_coding_transcript_exon_variant 0.3 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474140 n.483C>T non_coding_transcript_exon_variant 0.38 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474151 n.494C>T non_coding_transcript_exon_variant 0.37 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474181 n.524C>T non_coding_transcript_exon_variant 0.43 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474249 n.592G>T non_coding_transcript_exon_variant 0.29 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474291 n.635_649delTTCCTCTCCGGAGGA non_coding_transcript_exon_variant 0.29 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474308 n.651G>T non_coding_transcript_exon_variant 0.28 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474310 n.653T>G non_coding_transcript_exon_variant 0.28 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474356 n.699T>C non_coding_transcript_exon_variant 0.34 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474362 n.705A>G non_coding_transcript_exon_variant 0.33 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474376 n.719T>C non_coding_transcript_exon_variant 0.29 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474409 n.756_766delACCCACACGCG non_coding_transcript_exon_variant 0.29 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474427 n.770A>C non_coding_transcript_exon_variant 0.27 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474429 n.772G>C non_coding_transcript_exon_variant 0.26 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474431 n.774_775delGCinsATTGGG non_coding_transcript_exon_variant 0.26 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474435 n.780_783delGAAT non_coding_transcript_exon_variant 0.27 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474639 n.982G>A non_coding_transcript_exon_variant 0.38 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474794 n.1137C>T non_coding_transcript_exon_variant 0.45 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474812 n.1155G>A non_coding_transcript_exon_variant 0.4 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474823 n.1166C>T non_coding_transcript_exon_variant 0.42 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474831 n.1174A>G non_coding_transcript_exon_variant 0.4 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474904 n.1247G>A non_coding_transcript_exon_variant 0.32 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474956 n.1299C>T non_coding_transcript_exon_variant 0.25 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474960 n.1303C>G non_coding_transcript_exon_variant 0.26 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474963 n.1306G>T non_coding_transcript_exon_variant 0.26 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474964 n.1307T>A non_coding_transcript_exon_variant 0.28 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474965 n.1308G>C non_coding_transcript_exon_variant 0.26 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474970 n.1313G>A non_coding_transcript_exon_variant 0.3 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475006 n.1349A>T non_coding_transcript_exon_variant 0.35 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475061 n.1404C>T non_coding_transcript_exon_variant 0.28 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475088 n.1431A>T non_coding_transcript_exon_variant 0.25 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475199 n.1542G>A non_coding_transcript_exon_variant 0.26 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475206 n.1549C>T non_coding_transcript_exon_variant 0.26 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475209 n.1552G>C non_coding_transcript_exon_variant 0.26 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475213 n.1556C>T non_coding_transcript_exon_variant 0.26 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475249 n.1592T>C non_coding_transcript_exon_variant 0.3 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475252 n.1595C>T non_coding_transcript_exon_variant 0.29 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475266 n.1609T>C non_coding_transcript_exon_variant 0.22 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475267 n.1610G>A non_coding_transcript_exon_variant 0.21 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475275 n.1618C>T non_coding_transcript_exon_variant 0.2 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475276 n.1619T>C non_coding_transcript_exon_variant 0.2 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475291 n.1634A>C non_coding_transcript_exon_variant 0.24 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475313 n.1656G>A non_coding_transcript_exon_variant 0.2 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475315 n.1658A>T non_coding_transcript_exon_variant 0.2 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475419 n.1762C>T non_coding_transcript_exon_variant 0.17 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475483 n.1826C>T non_coding_transcript_exon_variant 0.19 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475505 n.1848G>A non_coding_transcript_exon_variant 0.22 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475526 n.1869C>A non_coding_transcript_exon_variant 0.22 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475599 n.1942A>G non_coding_transcript_exon_variant 0.15 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475608 n.1951T>C non_coding_transcript_exon_variant 0.16 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475638 n.1981C>T non_coding_transcript_exon_variant 0.15 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475657 n.2000A>G non_coding_transcript_exon_variant 0.19 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475659 n.2002G>T non_coding_transcript_exon_variant 0.2 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475881 n.2224T>C non_coding_transcript_exon_variant 0.41 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475988 n.2331A>G non_coding_transcript_exon_variant 0.28 capreomycin Not assoc w R
linezolid Uncertain significance
rrl 1476115 n.2458T>C non_coding_transcript_exon_variant 0.29 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476117 n.2460G>C non_coding_transcript_exon_variant 0.29 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476214 n.2557G>A non_coding_transcript_exon_variant 0.22 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476224 n.2567A>G non_coding_transcript_exon_variant 0.2 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476603 n.2946G>A non_coding_transcript_exon_variant 0.2 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476608 n.2951C>G non_coding_transcript_exon_variant 0.21 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476628 n.2971T>A non_coding_transcript_exon_variant 0.19 capreomycin Uncertain significance
linezolid Uncertain significance
rpsA 1833568 c.27G>C synonymous_variant 0.26 pyrazinamide Not assoc w R - Interim
rpsA 1833589 c.48A>T synonymous_variant 0.29 pyrazinamide Uncertain significance
rpsA 1833595 c.54T>C synonymous_variant 0.32 pyrazinamide Uncertain significance
rpsA 1833661 c.120A>G synonymous_variant 0.34 pyrazinamide Uncertain significance
rpsA 1833667 c.126C>G synonymous_variant 0.32 pyrazinamide Uncertain significance
rpsA 1833721 c.180A>G synonymous_variant 0.33 pyrazinamide Uncertain significance
rpsA 1833724 c.183C>G synonymous_variant 0.32 pyrazinamide Uncertain significance
rpsA 1833727 c.186G>C synonymous_variant 0.32 pyrazinamide Uncertain significance
rpsA 1833742 c.201A>G synonymous_variant 0.3 pyrazinamide Uncertain significance
rpsA 1833745 c.204G>C synonymous_variant 0.3 pyrazinamide Uncertain significance
rpsA 1833748 c.207C>G synonymous_variant 0.31 pyrazinamide Uncertain significance
rpsA 1833787 c.246C>G synonymous_variant 0.31 pyrazinamide Uncertain significance
rpsA 1833790 c.249T>C synonymous_variant 0.31 pyrazinamide Uncertain significance
rpsA 1833802 c.261A>G synonymous_variant 0.34 pyrazinamide Uncertain significance
rpsA 1833811 c.270G>T synonymous_variant 0.37 pyrazinamide Uncertain significance
rpsA 1833838 c.297G>C synonymous_variant 0.39 pyrazinamide Uncertain significance
rpsA 1833841 c.300C>G synonymous_variant 0.39 pyrazinamide Uncertain significance
rpsA 1833847 c.306C>G synonymous_variant 0.39 pyrazinamide Uncertain significance
rpsA 1833856 c.315A>G synonymous_variant 0.39 pyrazinamide Uncertain significance
rpsA 1833874 c.333T>C synonymous_variant 0.39 pyrazinamide Uncertain significance
rpsA 1833928 c.387G>C synonymous_variant 0.32 pyrazinamide Uncertain significance
rpsA 1833940 c.399C>G synonymous_variant 0.34 pyrazinamide Uncertain significance
rpsA 1833971 c.430C>T synonymous_variant 0.37 pyrazinamide Uncertain significance
rpsA 1833979 c.438T>C synonymous_variant 0.37 pyrazinamide Uncertain significance
rpsA 1834000 c.459G>C synonymous_variant 0.35 pyrazinamide Uncertain significance
rpsA 1834021 c.480C>T synonymous_variant 0.3 pyrazinamide Uncertain significance
rpsA 1834030 c.489C>G synonymous_variant 0.29 pyrazinamide Uncertain significance
rpsA 1834099 c.558C>G synonymous_variant 0.29 pyrazinamide Uncertain significance
rpsA 1834102 c.561T>C synonymous_variant 0.29 pyrazinamide Uncertain significance
rpsA 1834105 c.564C>G synonymous_variant 0.3 pyrazinamide Uncertain significance
rpsA 1834108 c.567C>G synonymous_variant 0.3 pyrazinamide Uncertain significance
rpsA 1834123 c.582C>G synonymous_variant 0.27 pyrazinamide Uncertain significance
rpsA 1834150 c.609G>C synonymous_variant 0.26 pyrazinamide Uncertain significance
rpsA 1834153 c.612T>C synonymous_variant 0.24 pyrazinamide Uncertain significance
rpsA 1834154 p.Asn205Gln missense_variant 0.24 pyrazinamide Uncertain significance
rpsA 1834157 c.616T>C synonymous_variant 0.24 pyrazinamide Uncertain significance
rpsA 1834162 c.621A>G synonymous_variant 0.24 pyrazinamide Not assoc w R - Interim
rpsA 1834165 c.624A>G synonymous_variant 0.24 pyrazinamide Uncertain significance
rpsA 1834169 p.Thr210Ala missense_variant 0.24 pyrazinamide Uncertain significance
rpsA 1834177 c.636A>C synonymous_variant 0.24 pyrazinamide Not assoc w R - Interim
rpsA 1834189 c.648G>C synonymous_variant 0.28 pyrazinamide Uncertain significance
rpsA 1834195 c.654G>C synonymous_variant 0.3 pyrazinamide Uncertain significance
rpsA 1834210 c.669C>T synonymous_variant 0.37 pyrazinamide Uncertain significance
rpsA 1834222 c.681T>C synonymous_variant 0.36 pyrazinamide Uncertain significance
rpsA 1834231 c.690T>C synonymous_variant 0.33 pyrazinamide Uncertain significance
rpsA 1834234 c.693G>C synonymous_variant 0.34 pyrazinamide Uncertain significance
rpsA 1834249 c.708T>C synonymous_variant 0.34 pyrazinamide Uncertain significance
rpsA 1834261 c.720A>G synonymous_variant 0.28 pyrazinamide Not assoc w R - Interim
rpsA 1834262 c.721_723delTCGinsAGC synonymous_variant 0.28 pyrazinamide Uncertain significance
rpsA 1834303 c.762T>C synonymous_variant 0.33 pyrazinamide Uncertain significance
rpsA 1834306 c.765T>C synonymous_variant 0.35 pyrazinamide Uncertain significance
rpsA 1834333 c.792C>T synonymous_variant 0.33 pyrazinamide Uncertain significance
rpsA 1834348 c.807T>C synonymous_variant 0.34 pyrazinamide Not assoc w R - Interim
rpsA 1834366 c.825A>G synonymous_variant 0.33 pyrazinamide Not assoc w R - Interim
rpsA 1834396 c.855G>C synonymous_variant 0.33 pyrazinamide Uncertain significance
rpsA 1834411 c.870T>C synonymous_variant 0.33 pyrazinamide Uncertain significance
rpsA 1834417 c.876G>C synonymous_variant 0.32 pyrazinamide Uncertain significance
rpsA 1834423 c.882G>C synonymous_variant 0.33 pyrazinamide Uncertain significance
rpsA 1834435 c.894G>C synonymous_variant 0.38 pyrazinamide Uncertain significance
rpsA 1834451 c.910T>C synonymous_variant 0.34 pyrazinamide Uncertain significance
rpsA 1834465 c.924T>C synonymous_variant 0.33 pyrazinamide Uncertain significance
rpsA 1834468 c.927A>G synonymous_variant 0.33 pyrazinamide Uncertain significance
rpsA 1834489 c.948T>C synonymous_variant 0.39 pyrazinamide Uncertain significance
rpsA 1834513 c.972C>G synonymous_variant 0.49 pyrazinamide Uncertain significance
rpsA 1834528 c.987T>C synonymous_variant 0.5 pyrazinamide Uncertain significance
rpsA 1834540 c.999G>C synonymous_variant 0.54 pyrazinamide Uncertain significance
rpsA 1834546 c.1005T>C synonymous_variant 0.55 pyrazinamide Uncertain significance
rpsA 1834609 c.1068T>C synonymous_variant 0.45 pyrazinamide Uncertain significance
rpsA 1834618 c.1077G>C synonymous_variant 0.45 pyrazinamide Uncertain significance
rpsA 1834633 c.1092A>G synonymous_variant 0.43 pyrazinamide Uncertain significance
rpsA 1834639 c.1098T>C synonymous_variant 0.42 pyrazinamide Uncertain significance
rpsA 1834654 p.Glu371Asp missense_variant 0.43 pyrazinamide Uncertain significance
rpsA 1834690 c.1149T>C synonymous_variant 0.41 pyrazinamide Uncertain significance
rpsA 1834732 c.1191T>C synonymous_variant 0.37 pyrazinamide Uncertain significance
rpsA 1834733 p.Ala398Ser missense_variant 0.37 pyrazinamide Uncertain significance
rpsA 1834738 c.1197A>G synonymous_variant 0.35 pyrazinamide Uncertain significance
tsnR 1853361 c.-245T>C upstream_gene_variant 0.19 linezolid Uncertain significance
tsnR 1853370 c.-236_-234delGCAinsTCG upstream_gene_variant 0.19 linezolid Uncertain significance
tsnR 1853387 c.-219T>G upstream_gene_variant 0.19 linezolid Uncertain significance
tsnR 1853394 c.-212_-211delCTinsGC upstream_gene_variant 0.18 linezolid Uncertain significance
tsnR 1854300 p.Leu232Pro missense_variant 1.0 linezolid Not assoc w R
tlyA 1917972 c.33A>G synonymous_variant 1.0 capreomycin Not assoc w R
Rv1979c 2223293 c.-129A>G upstream_gene_variant 1.0 bedaquiline Not assoc w R - Interim
clofazimine Not assoc w R
kasA 2517950 c.-165C>G upstream_gene_variant 0.27 isoniazid Uncertain significance
kasA 2518076 c.-39C>T upstream_gene_variant 1.0 isoniazid Uncertain significance
kasA 2518624 c.510C>G synonymous_variant 0.39 isoniazid Uncertain significance
kasA 2518639 c.525G>C synonymous_variant 0.43 isoniazid Uncertain significance
kasA 2518657 c.543G>C synonymous_variant 0.45 isoniazid Uncertain significance
kasA 2518672 c.558G>C synonymous_variant 0.38 isoniazid Uncertain significance
kasA 2518678 c.564C>T synonymous_variant 0.38 isoniazid Uncertain significance
kasA 2518684 c.570C>G synonymous_variant 0.36 isoniazid Uncertain significance
kasA 2518693 c.579C>G synonymous_variant 0.33 isoniazid Uncertain significance
kasA 2518696 c.582C>G synonymous_variant 0.33 isoniazid Uncertain significance
kasA 2518702 c.588C>T synonymous_variant 0.32 isoniazid Uncertain significance
kasA 2518705 c.591T>C synonymous_variant 0.32 isoniazid Uncertain significance
kasA 2518711 c.597A>G synonymous_variant 0.3 isoniazid Uncertain significance
kasA 2518714 c.600A>C synonymous_variant 0.3 isoniazid Uncertain significance
kasA 2518732 c.618C>G synonymous_variant 0.32 isoniazid Uncertain significance
kasA 2518744 c.630C>T synonymous_variant 0.32 isoniazid Uncertain significance
kasA 2518747 c.633C>G synonymous_variant 0.32 isoniazid Uncertain significance
kasA 2518768 c.654C>T synonymous_variant 0.38 isoniazid Uncertain significance
kasA 2518777 c.663C>T synonymous_variant 0.42 isoniazid Uncertain significance
kasA 2518783 c.669T>C synonymous_variant 0.42 isoniazid Uncertain significance
kasA 2518789 c.675G>C synonymous_variant 0.41 isoniazid Uncertain significance
kasA 2518792 c.678C>A synonymous_variant 0.41 isoniazid Uncertain significance
kasA 2518795 c.681C>G synonymous_variant 0.41 isoniazid Uncertain significance
kasA 2518825 c.711T>C synonymous_variant 0.47 isoniazid Uncertain significance
kasA 2518864 c.750G>C synonymous_variant 0.37 isoniazid Uncertain significance
kasA 2518879 c.765A>G synonymous_variant 0.29 isoniazid Uncertain significance
kasA 2518885 c.771T>C synonymous_variant 0.31 isoniazid Uncertain significance
kasA 2518898 c.784T>C synonymous_variant 0.31 isoniazid Uncertain significance
kasA 2518906 c.792A>G synonymous_variant 0.34 isoniazid Uncertain significance
kasA 2518910 p.Leu266Met missense_variant 0.34 isoniazid Uncertain significance
kasA 2518921 c.807T>C synonymous_variant 0.37 isoniazid Uncertain significance
kasA 2518936 c.822C>G synonymous_variant 0.38 isoniazid Uncertain significance
kasA 2518939 c.825T>C synonymous_variant 0.36 isoniazid Uncertain significance
kasA 2518942 c.828T>C synonymous_variant 0.36 isoniazid Uncertain significance
kasA 2518951 c.837G>C synonymous_variant 0.41 isoniazid Uncertain significance
kasA 2518954 c.840C>G synonymous_variant 0.39 isoniazid Uncertain significance
kasA 2518963 c.849T>C synonymous_variant 0.42 isoniazid Uncertain significance
Rv2477c 2782660 c.1383C>A synonymous_variant 0.15 amikacin Uncertain significance
ethambutol Not assoc w R - Interim
kanamycin Not assoc w R - Interim
levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
rifampicin Not assoc w R - Interim
streptomycin Not assoc w R - Interim
Rv2477c 2782669 c.1374A>G synonymous_variant 0.16 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2782695 c.1348A>C synonymous_variant 0.2 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2782705 c.1338G>C synonymous_variant 0.19 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2782711 c.1332C>G synonymous_variant 0.21 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2782714 c.1329A>C synonymous_variant 0.21 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2782720 c.1323T>C synonymous_variant 0.22 amikacin Uncertain significance
ethambutol Not assoc w R - Interim
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Not assoc w R - Interim
rifampicin Not assoc w R - Interim
streptomycin Not assoc w R - Interim
Rv2477c 2782729 c.1314A>G synonymous_variant 0.24 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2782732 c.1311A>G synonymous_variant 0.22 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2782741 c.1302G>A synonymous_variant 0.18 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2782750 c.1293T>C synonymous_variant 0.2 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2782759 c.1284A>G synonymous_variant 0.23 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2782828 c.1215T>C synonymous_variant 0.38 amikacin Uncertain significance
ethambutol Not assoc w R - Interim
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Not assoc w R - Interim
rifampicin Not assoc w R - Interim
streptomycin Not assoc w R - Interim
Rv2477c 2782841 p.Thr401Asn missense_variant 0.42 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2782847 p.Arg399Lys missense_variant 0.42 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2782852 c.1191T>C synonymous_variant 0.42 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2782861 c.1182T>G synonymous_variant 0.44 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2782864 c.1179T>C synonymous_variant 0.42 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2782869 p.Ala392Thr missense_variant 0.48 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2782876 c.1167G>C synonymous_variant 0.55 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2782882 c.1161T>C synonymous_variant 0.52 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2782912 p.Ser377Thr missense_variant 0.5 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2782927 p.Thr372Glu missense_variant 0.44 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2782936 c.1107G>T synonymous_variant 0.44 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2782948 c.1095A>G synonymous_variant 0.52 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2782957 c.1086A>G synonymous_variant 0.54 amikacin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
kanamycin Not assoc w R - Interim
levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
rifampicin Not assoc w R - Interim
streptomycin Not assoc w R - Interim
Rv2477c 2782966 c.1077C>A synonymous_variant 0.44 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2782969 c.1074A>C synonymous_variant 0.43 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2782972 c.1071G>C synonymous_variant 0.43 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2782981 c.1062G>C synonymous_variant 0.46 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2782984 c.1059T>C synonymous_variant 0.42 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2782990 c.1053C>G synonymous_variant 0.42 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783002 c.1041T>C synonymous_variant 0.5 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783008 c.1035C>G synonymous_variant 0.5 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783013 c.1030T>C synonymous_variant 0.48 amikacin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
kanamycin Not assoc w R - Interim
levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
rifampicin Not assoc w R - Interim
streptomycin Not assoc w R - Interim
Rv2477c 2783015 p.Ser343Thr missense_variant 0.48 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783035 c.1008G>C synonymous_variant 0.53 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783040 p.Ala335Thr missense_variant 0.53 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783044 c.999G>A synonymous_variant 0.53 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783048 p.Asp332Gly missense_variant 0.53 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783051 p.Tyr331Phe missense_variant 0.53 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783059 c.984T>C synonymous_variant 0.55 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783062 c.981C>T synonymous_variant 0.55 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783068 p.Asp325Glu missense_variant 0.55 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783077 c.966T>C synonymous_variant 0.59 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783092 c.951A>G synonymous_variant 0.53 amikacin Uncertain significance
ethambutol Not assoc w R - Interim
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Not assoc w R - Interim
streptomycin Uncertain significance
Rv2477c 2783095 c.948C>G synonymous_variant 0.55 amikacin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
kanamycin Not assoc w R - Interim
levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
rifampicin Not assoc w R
streptomycin Not assoc w R - Interim
Rv2477c 2783098 c.945C>G synonymous_variant 0.54 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783101 c.942G>T synonymous_variant 0.51 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783116 c.927T>C synonymous_variant 0.52 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783140 c.903C>G synonymous_variant 0.57 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783149 c.894G>C synonymous_variant 0.57 amikacin Not assoc w R - Interim
ethambutol Uncertain significance
kanamycin Not assoc w R - Interim
levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
rifampicin Not assoc w R - Interim
streptomycin Uncertain significance
Rv2477c 2783158 c.885A>C synonymous_variant 0.58 amikacin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
kanamycin Not assoc w R - Interim
levofloxacin Not assoc w R - Interim
moxifloxacin Uncertain significance
rifampicin Not assoc w R - Interim
streptomycin Uncertain significance
Rv2477c 2783182 c.861C>G synonymous_variant 0.59 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783185 c.858G>A synonymous_variant 0.58 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783194 c.849A>G synonymous_variant 0.61 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783221 c.822G>C synonymous_variant 0.53 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783224 c.819C>G synonymous_variant 0.5 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783230 c.813T>G synonymous_variant 0.53 amikacin Uncertain significance
ethambutol Not assoc w R - Interim
kanamycin Uncertain significance
levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
rifampicin Not assoc w R - Interim
streptomycin Not assoc w R - Interim
Rv2477c 2783235 c.808T>C synonymous_variant 0.57 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783254 c.789A>G synonymous_variant 0.53 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783263 c.780G>C synonymous_variant 0.58 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783275 c.768C>G synonymous_variant 0.59 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783278 c.765A>G synonymous_variant 0.53 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783293 c.750G>A synonymous_variant 0.5 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783299 c.744A>G synonymous_variant 0.5 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783302 c.741A>G synonymous_variant 0.5 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783311 c.732T>C synonymous_variant 0.48 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783314 c.729C>G synonymous_variant 0.48 amikacin Uncertain significance
ethambutol Not assoc w R - Interim
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Not assoc w R - Interim
streptomycin Not assoc w R - Interim
Rv2477c 2783317 c.726G>C synonymous_variant 0.48 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783332 c.711T>C synonymous_variant 0.48 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783335 c.708C>G synonymous_variant 0.44 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783344 c.699C>G synonymous_variant 0.43 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783350 c.693T>C synonymous_variant 0.39 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783353 c.690T>C synonymous_variant 0.41 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783359 c.684G>A synonymous_variant 0.42 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783374 c.669G>C synonymous_variant 0.33 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783395 c.648T>G synonymous_variant 0.33 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783422 c.621T>C synonymous_variant 0.3 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783425 p.Pro206Ala missense_variant 0.3 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783428 c.615C>T synonymous_variant 0.31 amikacin Not assoc w R - Interim
ethambutol Uncertain significance
kanamycin Not assoc w R - Interim
levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
rifampicin Not assoc w R - Interim
streptomycin Uncertain significance
Rv2477c 2783431 c.610_612delAGCinsTCG synonymous_variant 0.32 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783437 c.606G>C synonymous_variant 0.31 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783440 c.603T>C synonymous_variant 0.33 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783461 c.582T>C synonymous_variant 0.41 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783464 c.579A>G synonymous_variant 0.44 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783467 c.576G>C synonymous_variant 0.44 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783473 c.570A>C synonymous_variant 0.48 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783485 c.558G>C synonymous_variant 0.55 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783497 c.544_546delTTGinsCTC synonymous_variant 0.55 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783502 c.541T>C synonymous_variant 0.53 amikacin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
kanamycin Not assoc w R - Interim
levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
rifampicin Not assoc w R - Interim
streptomycin Not assoc w R - Interim
Rv2477c 2783512 c.531A>G synonymous_variant 0.55 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783520 c.523T>C synonymous_variant 0.52 amikacin Uncertain significance
ethambutol Not assoc w R - Interim
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Not assoc w R - Interim
streptomycin Uncertain significance
Rv2477c 2783521 c.522G>C synonymous_variant 0.52 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783527 c.516A>G synonymous_variant 0.47 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783539 c.504G>C synonymous_variant 0.39 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783542 c.501G>C synonymous_variant 0.38 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783548 c.495T>C synonymous_variant 0.38 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783554 c.489C>T synonymous_variant 0.38 amikacin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
kanamycin Not assoc w R - Interim
levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
rifampicin Not assoc w R - Interim
streptomycin Uncertain significance
Rv2477c 2783557 c.486T>C synonymous_variant 0.38 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783563 c.480A>G synonymous_variant 0.36 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783572 c.471A>G synonymous_variant 0.37 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783586 p.Ala153Pro missense_variant 0.39 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783593 c.450T>C synonymous_variant 0.43 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783605 c.438T>C synonymous_variant 0.46 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783620 c.423C>G synonymous_variant 0.5 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783628 p.Ala139Ser missense_variant 0.5 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783656 c.387G>C synonymous_variant 0.52 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783662 c.381G>A synonymous_variant 0.51 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783665 c.378A>G synonymous_variant 0.52 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783674 c.369T>C synonymous_variant 0.51 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783683 c.360A>G synonymous_variant 0.5 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783700 p.Thr115Ser missense_variant 0.48 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783718 c.325T>C synonymous_variant 0.5 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783719 c.324A>G synonymous_variant 0.49 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783751 p.Ile98Val missense_variant 0.48 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783758 p.Asp95Glu missense_variant 0.48 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783761 c.282G>C synonymous_variant 0.47 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783766 p.Met93Leu missense_variant 0.48 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783776 c.267G>C synonymous_variant 0.49 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783779 c.264T>C synonymous_variant 0.48 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783797 p.Asp82Glu missense_variant 0.55 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783815 c.228A>G synonymous_variant 0.51 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783821 p.Gln74Leu missense_variant 0.48 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783833 c.210G>C synonymous_variant 0.48 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783839 c.204C>G synonymous_variant 0.47 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783843 p.Gly67Asp missense_variant 0.47 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783846 p.Thr66Asn missense_variant 0.48 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783860 c.183T>C synonymous_variant 0.5 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783863 c.180C>T synonymous_variant 0.49 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783883 c.160T>C synonymous_variant 0.42 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783884 c.159T>C synonymous_variant 0.42 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783887 c.156C>G synonymous_variant 0.42 amikacin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
kanamycin Not assoc w R - Interim
levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
rifampicin Not assoc w R - Interim
streptomycin Not assoc w R - Interim
Rv2477c 2783914 c.129T>C synonymous_variant 0.41 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783920 c.123G>C synonymous_variant 0.41 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783929 c.114C>G synonymous_variant 0.4 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783932 c.111C>T synonymous_variant 0.42 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783938 c.105T>C synonymous_variant 0.39 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783953 c.90G>A synonymous_variant 0.39 amikacin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
kanamycin Not assoc w R - Interim
levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
rifampicin Not assoc w R - Interim
streptomycin Uncertain significance
Rv2477c 2783962 c.81T>C synonymous_variant 0.37 amikacin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
kanamycin Not assoc w R - Interim
levofloxacin Uncertain significance
moxifloxacin Not assoc w R - Interim
rifampicin Not assoc w R - Interim
streptomycin Not assoc w R - Interim
Rv2477c 2783971 c.72G>C synonymous_variant 0.36 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783980 c.63C>G synonymous_variant 0.41 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783992 c.51T>C synonymous_variant 0.37 amikacin Uncertain significance
ethambutol Not assoc w R - Interim
kanamycin Not assoc w R - Interim
levofloxacin Not assoc w R - Interim
moxifloxacin Uncertain significance
rifampicin Not assoc w R - Interim
streptomycin Not assoc w R - Interim
Rv2752c 3064876 p.Ser439Phe missense_variant 1.0 ethambutol Uncertain significance
isoniazid Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
thyX 3067793 c.153T>C synonymous_variant 0.2 para-aminosalicylic_acid Uncertain significance
thyX 3067799 c.147G>A synonymous_variant 0.21 para-aminosalicylic_acid Uncertain significance
thyX 3067802 c.144C>G synonymous_variant 0.21 para-aminosalicylic_acid Uncertain significance
ald 3086788 c.-32T>C upstream_gene_variant 1.0 cycloserine Uncertain significance
mtrB 3625065 p.Met517Leu missense_variant 1.0 bedaquiline Uncertain significance
rifampicin Not assoc w R
mtrB 3626972 c.-359A>G upstream_gene_variant 0.3 bedaquiline Uncertain significance
rifampicin Uncertain significance
mtrB 3626987 c.-374C>G upstream_gene_variant 0.33 bedaquiline Uncertain significance
rifampicin Uncertain significance
mtrB 3627008 c.-395G>C upstream_gene_variant 0.31 bedaquiline Uncertain significance
rifampicin Uncertain significance
mtrB 3627011 c.-398T>G upstream_gene_variant 0.31 bedaquiline Uncertain significance
rifampicin Uncertain significance
mtrB 3627074 c.-461G>C upstream_gene_variant 0.32 bedaquiline Uncertain significance
rifampicin Uncertain significance
mtrA 3627080 c.270T>C synonymous_variant 0.31 bedaquiline Uncertain significance
rifampicin Not assoc w R - Interim
mtrB 3627083 c.-470G>C upstream_gene_variant 0.29 bedaquiline Uncertain significance
rifampicin Uncertain significance
mtrA 3627098 c.252A>C synonymous_variant 0.28 bedaquiline Uncertain significance
rifampicin Not assoc w R - Interim
mtrB 3627104 c.-491C>G upstream_gene_variant 0.3 bedaquiline Uncertain significance
rifampicin Uncertain significance
mtrA 3627119 c.231T>G synonymous_variant 0.24 bedaquiline Uncertain significance
rifampicin Not assoc w R - Interim
mtrB 3627122 c.-509T>C upstream_gene_variant 0.25 bedaquiline Uncertain significance
rifampicin Uncertain significance
mtrB 3627167 c.-554T>C upstream_gene_variant 0.26 bedaquiline Uncertain significance
rifampicin Uncertain significance
mtrB 3627181 c.-568T>C upstream_gene_variant 0.24 bedaquiline Uncertain significance
rifampicin Uncertain significance
mtrB 3627182 c.-569T>C upstream_gene_variant 0.24 bedaquiline Uncertain significance
rifampicin Uncertain significance
mtrA 3627188 c.162A>G synonymous_variant 0.26 bedaquiline Uncertain significance
rifampicin Not assoc w R - Interim
mtrB 3627209 c.-596G>A upstream_gene_variant 0.21 bedaquiline Uncertain significance
rifampicin Uncertain significance
mtrA 3627227 c.123T>C synonymous_variant 0.23 bedaquiline Uncertain significance
rifampicin Not assoc w R - Interim
mtrB 3627233 c.-620T>C upstream_gene_variant 0.21 bedaquiline Uncertain significance
rifampicin Uncertain significance
mtrB 3627236 c.-623T>C upstream_gene_variant 0.21 bedaquiline Uncertain significance
rifampicin Uncertain significance
mtrA 3627242 c.108C>T synonymous_variant 0.21 bedaquiline Uncertain significance
rifampicin Not assoc w R - Interim
mtrB 3627263 c.-650C>T upstream_gene_variant 0.2 bedaquiline Uncertain significance
rifampicin Uncertain significance
mtrB 3627266 c.-653A>G upstream_gene_variant 0.18 bedaquiline Uncertain significance
rifampicin Uncertain significance
mtrB 3627272 c.-659G>T upstream_gene_variant 0.17 bedaquiline Uncertain significance
rifampicin Uncertain significance
mtrB 3627275 c.-662G>T upstream_gene_variant 0.17 bedaquiline Uncertain significance
rifampicin Uncertain significance
mtrB 3627296 c.-683T>C upstream_gene_variant 0.18 bedaquiline Uncertain significance
rifampicin Uncertain significance
rpoA 3877613 p.Ile299Val missense_variant 0.18 rifampicin Uncertain significance
rpoA 3877617 c.891G>C synonymous_variant 0.18 rifampicin Uncertain significance
rpoA 3877656 c.852T>G synonymous_variant 0.21 rifampicin Not assoc w R - Interim
rpoA 3877668 c.840A>G synonymous_variant 0.2 rifampicin Uncertain significance
rpoA 3877679 p.Ala277Ser missense_variant 0.2 rifampicin Uncertain significance
rpoA 3877686 c.822A>G synonymous_variant 0.19 rifampicin Not assoc w R - Interim
rpoA 3877692 c.816G>C synonymous_variant 0.19 rifampicin Not assoc w R - Interim
rpoA 3877737 c.771G>C synonymous_variant 0.2 rifampicin Uncertain significance
rpoA 3877743 c.765T>C synonymous_variant 0.19 rifampicin Not assoc w R - Interim
rpoA 3877748 c.760C>T synonymous_variant 0.19 rifampicin Not assoc w R - Interim
rpoA 3877764 c.744C>G synonymous_variant 0.21 rifampicin Not assoc w R - Interim
rpoA 3878878 c.-371T>C upstream_gene_variant 0.38 rifampicin Uncertain significance
rpoA 3878881 c.-374C>T upstream_gene_variant 0.38 rifampicin Uncertain significance
rpoA 3878890 c.-383C>G upstream_gene_variant 0.33 rifampicin Uncertain significance
rpoA 3879079 c.-572A>G upstream_gene_variant 0.4 rifampicin Uncertain significance
rpoA 3879088 c.-581A>C upstream_gene_variant 0.4 rifampicin Uncertain significance
rpoA 3879094 c.-587T>C upstream_gene_variant 0.42 rifampicin Uncertain significance
rpoA 3879121 c.-614T>G upstream_gene_variant 0.43 rifampicin Uncertain significance
rpoA 3879127 c.-620T>C upstream_gene_variant 0.45 rifampicin Uncertain significance
rpoA 3879154 c.-647T>C upstream_gene_variant 0.38 rifampicin Uncertain significance
rpoA 3879160 c.-653A>G upstream_gene_variant 0.38 rifampicin Uncertain significance
rpoA 3879178 c.-671T>C upstream_gene_variant 0.37 rifampicin Uncertain significance
rpoA 3879190 c.-683C>G upstream_gene_variant 0.31 rifampicin Uncertain significance
clpC1 4038821 c.1884G>A synonymous_variant 0.3 pyrazinamide Uncertain significance
clpC1 4038845 c.1860G>C synonymous_variant 0.39 pyrazinamide Uncertain significance
clpC1 4038860 c.1845G>C synonymous_variant 0.36 pyrazinamide Not assoc w R - Interim
clpC1 4038878 c.1827A>G synonymous_variant 0.37 pyrazinamide Not assoc w R - Interim
clpC1 4038908 c.1797C>G synonymous_variant 0.33 pyrazinamide Uncertain significance
clpC1 4038914 c.1791G>C synonymous_variant 0.34 pyrazinamide Uncertain significance
clpC1 4038923 c.1780_1782delCTAinsTTG synonymous_variant 0.33 pyrazinamide Uncertain significance
clpC1 4038953 c.1752A>G synonymous_variant 0.33 pyrazinamide Uncertain significance
clpC1 4038956 c.1749T>C synonymous_variant 0.31 pyrazinamide Uncertain significance
clpC1 4038965 c.1740T>C synonymous_variant 0.28 pyrazinamide Uncertain significance
clpC1 4038971 c.1734T>C synonymous_variant 0.29 pyrazinamide Uncertain significance
clpC1 4038974 c.1731T>C synonymous_variant 0.29 pyrazinamide Not assoc w R - Interim
clpC1 4038989 c.1716T>C synonymous_variant 0.28 pyrazinamide Uncertain significance
clpC1 4038997 c.1708T>C synonymous_variant 0.28 pyrazinamide Not assoc w R - Interim
clpC1 4039004 c.1701C>G synonymous_variant 0.27 pyrazinamide Uncertain significance
clpC1 4039064 c.1641C>T synonymous_variant 0.28 pyrazinamide Uncertain significance
clpC1 4039169 p.Glu512Asp missense_variant 0.16 pyrazinamide Uncertain significance
clpC1 4039172 c.1533A>G synonymous_variant 0.16 pyrazinamide Uncertain significance
clpC1 4039226 c.1479T>C synonymous_variant 0.23 pyrazinamide Not assoc w R - Interim
clpC1 4039229 c.1476C>G synonymous_variant 0.23 pyrazinamide Uncertain significance
clpC1 4039274 c.1431G>C synonymous_variant 0.25 pyrazinamide Not assoc w R - Interim
clpC1 4039286 c.1419T>C synonymous_variant 0.26 pyrazinamide Uncertain significance
clpC1 4039295 c.1410A>C synonymous_variant 0.29 pyrazinamide Uncertain significance
clpC1 4039298 c.1407T>C synonymous_variant 0.29 pyrazinamide Uncertain significance
clpC1 4039319 c.1386T>C synonymous_variant 0.32 pyrazinamide Not assoc w R - Interim
clpC1 4039322 c.1383T>C synonymous_variant 0.32 pyrazinamide Uncertain significance
clpC1 4039328 c.1377A>C synonymous_variant 0.28 pyrazinamide Uncertain significance
clpC1 4039331 c.1374C>G synonymous_variant 0.28 pyrazinamide Uncertain significance
clpC1 4039337 p.Thr456Gln missense_variant 0.28 pyrazinamide Uncertain significance
clpC1 4039349 c.1356C>T synonymous_variant 0.27 pyrazinamide Uncertain significance
clpC1 4039352 c.1353C>G synonymous_variant 0.27 pyrazinamide Uncertain significance
clpC1 4039364 c.1341C>G synonymous_variant 0.27 pyrazinamide Uncertain significance
clpC1 4039391 c.1314T>G synonymous_variant 0.25 pyrazinamide Uncertain significance
clpC1 4039397 c.1308A>G synonymous_variant 0.24 pyrazinamide Uncertain significance
clpC1 4039409 c.1296T>C synonymous_variant 0.21 pyrazinamide Uncertain significance
clpC1 4039412 c.1293T>G synonymous_variant 0.21 pyrazinamide Uncertain significance
clpC1 4039415 p.Glu430Asp missense_variant 0.21 pyrazinamide Uncertain significance
clpC1 4039430 c.1275T>C synonymous_variant 0.19 pyrazinamide Uncertain significance
clpC1 4039442 c.1263A>G synonymous_variant 0.19 pyrazinamide Uncertain significance
clpC1 4039625 c.1080G>A synonymous_variant 0.19 pyrazinamide Uncertain significance
clpC1 4039661 c.1044T>G synonymous_variant 0.26 pyrazinamide Uncertain significance
clpC1 4039664 c.1041G>C synonymous_variant 0.24 pyrazinamide Uncertain significance
clpC1 4039694 c.1011G>C synonymous_variant 0.21 pyrazinamide Uncertain significance
clpC1 4039790 c.915C>G synonymous_variant 0.16 pyrazinamide Uncertain significance
clpC1 4039898 c.807C>G synonymous_variant 0.22 pyrazinamide Uncertain significance
clpC1 4039928 c.775_777delAGCinsTCG synonymous_variant 0.2 pyrazinamide Uncertain significance
clpC1 4039931 c.774T>C synonymous_variant 0.21 pyrazinamide Uncertain significance
clpC1 4039937 c.768G>C synonymous_variant 0.22 pyrazinamide Uncertain significance
clpC1 4039946 c.759A>C synonymous_variant 0.23 pyrazinamide Uncertain significance
clpC1 4039952 c.753T>C synonymous_variant 0.23 pyrazinamide Uncertain significance
clpC1 4039979 c.726C>G synonymous_variant 0.34 pyrazinamide Uncertain significance
clpC1 4039988 c.717C>G synonymous_variant 0.36 pyrazinamide Uncertain significance
clpC1 4039991 c.714G>C synonymous_variant 0.36 pyrazinamide Uncertain significance
clpC1 4040021 c.684A>C synonymous_variant 0.31 pyrazinamide Not assoc w R - Interim
clpC1 4040024 c.681A>G synonymous_variant 0.31 pyrazinamide Uncertain significance
clpC1 4040033 c.672G>C synonymous_variant 0.32 pyrazinamide Uncertain significance
clpC1 4040036 c.669C>G synonymous_variant 0.32 pyrazinamide Uncertain significance
clpC1 4040090 c.613_615delTCTinsAGC synonymous_variant 0.23 pyrazinamide Uncertain significance
clpC1 4040093 c.612C>G synonymous_variant 0.25 pyrazinamide Not assoc w R - Interim
clpC1 4040105 c.600C>G synonymous_variant 0.29 pyrazinamide Uncertain significance
clpC1 4040354 c.351A>G synonymous_variant 0.21 pyrazinamide Uncertain significance
clpC1 4040380 c.325T>C synonymous_variant 0.24 pyrazinamide Uncertain significance
clpC1 4040381 c.324T>C synonymous_variant 0.23 pyrazinamide Uncertain significance
clpC1 4040387 c.318A>G synonymous_variant 0.26 pyrazinamide Uncertain significance
glpK 4138634 c.1122G>A synonymous_variant 0.26 ethambutol Not assoc w R - Interim
isoniazid Not assoc w R - Interim
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Not assoc w R - Interim
streptomycin Not assoc w R - Interim
glpK 4138643 c.1113A>C synonymous_variant 0.23 ethambutol Uncertain significance
isoniazid Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
glpK 4138654 c.1102C>T synonymous_variant 0.26 ethambutol Not assoc w R - Interim
isoniazid Not assoc w R - Interim
levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
rifampicin Not assoc w R - Interim
streptomycin Not assoc w R - Interim
glpK 4138670 c.1086G>C synonymous_variant 0.27 ethambutol Uncertain significance
isoniazid Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
embC 4239298 c.-565C>T upstream_gene_variant 0.97 ethambutol Not assoc w R
embC 4241089 c.1227C>G synonymous_variant 0.19 ethambutol Uncertain significance
embC 4241095 c.1233C>T synonymous_variant 0.19 ethambutol Uncertain significance
embC 4241107 c.1245G>C synonymous_variant 0.18 ethambutol Uncertain significance
embC 4241140 c.1278A>G synonymous_variant 0.18 ethambutol Not assoc w R - Interim
embC 4242643 c.2781C>T synonymous_variant 1.0 ethambutol Not assoc w R
embC 4242803 p.Val981Leu missense_variant 0.87 ethambutol Not assoc w R
embB 4248097 c.1584C>G synonymous_variant 0.16 ethambutol Uncertain significance
embB 4249498 c.2985G>C synonymous_variant 0.3 ethambutol Uncertain significance
embB 4249521 p.Ala1003Val missense_variant 0.29 ethambutol Uncertain significance
embB 4249525 c.3012T>C synonymous_variant 0.29 ethambutol Not assoc w R - Interim
embB 4249529 p.Ile1006Val missense_variant 0.3 ethambutol Uncertain significance
embB 4249532 p.Ala1007Thr missense_variant 0.3 ethambutol Uncertain significance
embB 4249537 c.3024A>G synonymous_variant 0.3 ethambutol Uncertain significance
embB 4249543 c.3030G>C synonymous_variant 0.29 ethambutol Uncertain significance
embB 4249546 c.3033G>A synonymous_variant 0.29 ethambutol Uncertain significance
embB 4249558 c.3045A>C synonymous_variant 0.29 ethambutol Uncertain significance
embB 4249568 p.Ser1019Thr missense_variant 0.29 ethambutol Uncertain significance
embB 4249573 c.3060T>C synonymous_variant 0.29 ethambutol Uncertain significance
embB 4249580 p.Leu1023Met missense_variant 0.29 ethambutol Uncertain significance
aftB 4268225 c.612G>C synonymous_variant 0.27 ethambutol Uncertain significance
aftB 4268236 p.Leu201Met missense_variant 0.26 ethambutol Uncertain significance
ethA 4326644 p.Asp277Gly missense_variant 1.0 ethionamide Uncertain significance
whiB6 4338595 c.-75delG upstream_gene_variant 1.0 amikacin Not assoc w R
capreomycin Not assoc w R
kanamycin Not assoc w R
whiB6 4338732 c.-211C>T upstream_gene_variant 1.0 amikacin Uncertain significance
capreomycin Uncertain significance
kanamycin Uncertain significance