Rv2245 - c.543G>C


Drug resistance types
4 Sensitive 5 RR-TB 39 HR-TB 13 MDR-TB 3 Pre-XDR-TB 1 XDR-TB 101 Other
lineage Counts
lineage Count
lineage4.1.3 2
lineage1.2.2.2 1
lineage5.2 2
lineage3 4
La3;lineage4.9 4
lineage4.9 25
lineage2.2.1 6
lineage2.1;lineage4.9 13
lineage4.9;lineage6.3 5
La3;lineage4.8 1
lineage2.1 3
M.canetti;lineage2.1;lineage6.3 1
lineage6.1.1 2
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage4.2;lineage4.8.1;lineage4.9 1
La1.7;lineage4.2 1
lineage2.2.1.1 2
lineage4.1.2.1 11
lineage2.2 2
12
lineage2.1;lineage4.9;lineage6.3 10
lineage4.2;lineage4.9 1
La1.6;lineage4 1
lineage3.1.2.1;lineage4 1
lineage4.3.3;lineage4.3.4.1 1
La1.2.BCG;La1.8.1 1
lineage4.8 4
M.canetti;lineage4.2;lineage4.9 1
La3;lineage2.1;lineage4.9 2
lineage6.3.1 1
La2;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
M.canetti;lineage4.9 1
lineage4.9;lineage9 2
lineage4.1.1.1 2
M.canetti;lineage1 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage4.3.2 1
La2;lineage4.9;lineage9 1
La3 1
M.canetti;lineage2.1;lineage4.9 2
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La1;lineage4.9 1
lineage4.3.2;lineage4.9 1
lineage4.1 1
lineage4.3.4.2.1 2
La3;lineage2.2.1 1
La3;lineage2 1
lineage1.1.2 2
lineage4 1
lineage2.1;lineage6.3 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage4.6.2.2 1
lineage4.6.3;lineage4.9 2
lineage3.1.2.1;lineage4.9 1
La3;lineage2.1;lineage6.3 1
lineage3.1.2.1;lineage3.1.2.2 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
M.canetti;lineage4.9;lineage9 1
La3;M.canetti;lineage2.2.1 1
lineage2.2.1;lineage3 1
La1.2;La1.8.1 1
lineage3.1.2.2 1
La3;lineage4.3.4 1
spoligotype Counts
spoligotype Count
None 166
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR3804169 HR-TB lineage4.1.3 None
ERR4797201 Other lineage1.2.2.2 None
ERR4872094 MDR-TB lineage5.2 None
ERR4800341 Other lineage3 None
ERR176643 Other La3;lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
SRR14782405 HR-TB lineage4.9 None
SRR1180172 Other lineage2.2.1 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR13265748 Other lineage4.9;lineage6.3 None
ERR12015083 Other La3;lineage4.8 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR3799304 Other lineage6.1.1 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR23961559 Other La1.7;lineage4.2 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR3804155 Other lineage4.1.2.1 None
ERR4800527 MDR-TB lineage2.2.1 None
SRR20970016 Other lineage2.2 None
ERR9786642 Other lineage4.1.2.1 None
ERR9787197 Other None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
SRR3675457 Other lineage4.9 None
SRR28351554 Sensitive La1.6;lineage4 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
SRR3675232 Other lineage4.1.2.1 None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR28351455 Other lineage3.1.2.1;lineage4 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
ERR9786508 Sensitive lineage4.3.3;lineage4.3.4.1 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786569 Other lineage4.8 None
ERR9786986 HR-TB lineage4.1.2.1 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR9787139 Other lineage6.3.1 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR9786682 Other lineage4.1.2.1 None
ERR323039 HR-TB La2;lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR15368973 Other lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR6789626 Other None
SRR29051077 Other lineage4.9 None
ERR9786617 Other lineage4.1.1.1 None
ERR161037 Other lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
SRR6046720 HR-TB lineage4.9;lineage9 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
SRR6458423 HR-TB lineage2.2.1 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR9117805 Other lineage4.3.2 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR1172728 RR-TB La3 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR176751 Other lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR1180147 Other lineage2.2.1.1 None
SRR7496472 Other lineage4.9 None
ERR6359082 Other lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
ERR3797070 Other lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR9119500 MDR-TB lineage5.2 None
ERR987722 MDR-TB None
ERR212033 Other lineage4.9 None
ERR4814352 Other lineage2.2.1 None
ERR4769497 Other La1;lineage4.9 None
ERR9786671 Other None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
ERR9786440 Other lineage4.1 None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4407463 HR-TB None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR181744 HR-TB La3;lineage4.9 None
SRR18213713 HR-TB None
ERR2514327 HR-TB lineage4.8 None
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
SRR20969677 HR-TB La3;lineage2 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR3675214 Other lineage4.9 None
SRR25827687 MDR-TB lineage1.1.2 None
SRR26399973 Other La3;lineage4.9 None
ERR9786627 Other lineage4.1.2.1 None
SRR17658565 Pre-XDR-TB lineage3 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR14782054 Other lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
SRR5341330 Other lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SRR3675236 Other None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR11049020 Other lineage4.8 None
ERR4816466 HR-TB lineage4.9 None
ERR4798139 RR-TB lineage1.1.2 None
ERR702406 Other lineage2.1 None
ERR5336148 Other lineage2.1;lineage6.3 None
ERR1034634 HR-TB lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR9786645 Other lineage4.6.2.2 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1183144 Other lineage2.2.1 None
ERR2041725 MDR-TB lineage4.1.2.1 None
SRR1184381 MDR-TB None
SRR26159047 Other lineage4.6.3;lineage4.9 None
SRR25827682 Other None
ERR234659 Other None
SRR28119752 Other lineage4.9 None
ERR9786601 Other lineage4.1.2.1 None
SRR12142341 HR-TB lineage2.1 None
ERR9786421 Other lineage4.1.2.1 None
ERR9786604 Other None
SRR17832802 HR-TB lineage3 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR13265528 Other lineage4.9;lineage6.3 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
SRR29096410 Other lineage4.9 None
ERR2514390 Sensitive lineage3.1.2.1;lineage4.9 None
SRR1173778 Other lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
SRR29097026 Other lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
SRR3675275 Other lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
ERR9787014 Other lineage6.1.1 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797069 Other lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR20969708 HR-TB lineage2.2 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR11466146 Other lineage4.3.4.2.1 None
ERR4799025 Other lineage4.8 None
ERR4815604 Other None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR29016901 Other La3;lineage4.9 None
SRR13423649 Sensitive lineage2.2.1 None
SRR7240033 Other La1.2;La1.8.1 None
SRR26159043 Other lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR4798504 RR-TB lineage3 None
SRR1196546 Other lineage4.9 None
ERR176793 Other lineage4.1.1.1 None