Rv2245 - c.543G>C
Drug resistance types
7 Sensitive
4 RR-TB
36 HR-TB
14 MDR-TB
2 Pre-XDR-TB
1 XDR-TB
102 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 11 |
| lineage2.1;lineage4.9 | 13 |
| lineage4.3.3;lineage4.3.4.1 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 7 |
| La1.2.BCG;La1.8.1 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| 21 | |
| lineage2.2.1.2 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage3.1;lineage4.9 | 1 |
| lineage4 | 1 |
| lineage4.9 | 27 |
| lineage1.1.2 | 3 |
| lineage4.3.4 | 1 |
| lineage6.1.1 | 2 |
| lineage4.1.3 | 2 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| lineage5.2 | 2 |
| lineage2.2.1 | 10 |
| La3;lineage4.9 | 4 |
| lineage2.1;lineage6.3 | 2 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage4.2;lineage4.9 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 5 |
| lineage3.1.2.1;lineage4 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 2 |
| La3;M.canetti;lineage2.2.1 | 1 |
| La2;lineage4.9 | 1 |
| lineage4.8 | 5 |
| M.canetti;lineage4.9 | 1 |
| lineage3.1.2.2 | 1 |
| M.canetti;lineage1 | 1 |
| lineage6.3.1 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| lineage3 | 2 |
| lineage2.1 | 2 |
| La3 | 1 |
| lineage2.2.1;lineage3 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| La1.8.1 | 1 |
| lineage2.2.1.1 | 2 |
| La1;lineage4.9 | 1 |
| La1.6;lineage4 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La3;lineage2.1;lineage4.9 | 2 |
| lineage4.6.3;lineage4.9 | 2 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.1.1.1 | 2 |
| lineage4.9;lineage9 | 2 |
| lineage4.1 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 1 |
| La1.7;lineage4.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 166 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675232 | Other | lineage4.1.2.1 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | ERR9786508 | Sensitive | lineage4.3.3;lineage4.3.4.1 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | SRR3675508 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR18213713 | HR-TB | None | ERR4797054 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR4815604 | Other | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | ERR11466146 | Other | lineage4.3.4.2.1 | None | ERR161034 | Other | lineage4.3.4.2.1 | None | ERR2514390 | Sensitive | lineage3.1;lineage4.9 | None | ERR2027263 | Other | lineage4 | None | ERR212123 | Other | lineage4.9 | None | ERR4798139 | Sensitive | lineage1.1.2 | None | ERR4797201 | Other | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR26159043 | Other | lineage4.9 | None | ERR3799304 | Other | lineage6.1.1 | None | SRR29051077 | Other | lineage4.9 | None | ERR4810741 | HR-TB | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR161037 | Other | lineage4.9 | None | ERR4811142 | RR-TB | None | SRR1196546 | Other | lineage4.9 | None | SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR12142341 | HR-TB | lineage2.2.1 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9119500 | MDR-TB | lineage5.2 | None | SRR20970016 | Other | lineage2.2.1 | None | ERR176643 | Other | La3;lineage4.9 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | SRR29097026 | Other | lineage4.9 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | SRR28119752 | Other | lineage4.9 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR6359082 | Other | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR3797070 | Other | lineage4.9 | None | ERR9786642 | Other | lineage4.1.2.1 | None | SRR25827682 | Other | None | ERR9786601 | Other | lineage4.1.2.1 | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR3675457 | Other | lineage4.9 | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | SRR28351455 | Other | lineage3.1.2.1;lineage4 | None | SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR29096410 | Other | lineage4.9 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | SRR3675275 | Other | lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | SRR1184388 | Other | lineage2.1;lineage4.9 | None | SRR3675214 | Other | lineage4.9 | None | ERR3797069 | Other | lineage4.9 | None | SRR26399973 | Other | La3;lineage4.9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1196494 | MDR-TB | None | ERR4799025 | Other | lineage4.8 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR11049020 | Other | lineage4.8 | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR4800341 | Other | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR9786569 | Other | lineage4.8 | None | ERR9787139 | Other | lineage6.3.1 | None | SRR3675236 | Other | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | SRR17832802 | HR-TB | lineage3 | None | SRR20969677 | HR-TB | lineage2.1 | None | SRR20969708 | HR-TB | lineage2.2.1 | None | SRR1172728 | RR-TB | La3 | None | SRR25827497 | XDR-TB | lineage2.2.1;lineage3 | None | SRR25827687 | MDR-TB | lineage1.1.2 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR7240033 | Other | La1.8.1 | None | ERR176751 | Other | lineage4.9 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR7496472 | Other | lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR3804155 | Other | lineage4.1.2.1 | None | SRR1184381 | MDR-TB | None | ERR9787197 | Other | None | ERR234659 | Other | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR9786604 | Other | None | SRR5341333 | Other | lineage2.1;lineage4.9 | None | SRR28351554 | Sensitive | La1.6;lineage4 | None | ERR13265528 | Other | lineage4.9;lineage6.3 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR4407463 | HR-TB | None | SRR1173778 | Other | lineage4.9 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR12015083 | Other | lineage4.8 | None | SRR15368973 | Other | lineage4.9 | None | ERR176793 | Other | lineage4.1.1.1 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | SRR6789626 | Other | None | SRR5341330 | Other | lineage4.9 | None | SRR29016901 | Other | La3;lineage4.9 | None | ERR4811105 | HR-TB | None | ERR4798504 | RR-TB | lineage3 | None | ERR4811075 | Other | None | ERR4811311 | Other | None | ERR9786617 | Other | lineage4.1.1.1 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9786440 | Other | lineage4.1 | None | SRR12416824 | HR-TB | None | SRR13423649 | Sensitive | lineage2.2.1 | None | ERR9786627 | Other | lineage4.1.2.1 | None | ERR987729 | HR-TB | lineage3.1.2.1 | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | ERR702406 | Other | lineage2.1 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR29055629 | MDR-TB | lineage2.2.1 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | ERR1034634 | HR-TB | lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR29096683 | Sensitive | lineage1.1.2 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR29097037 | Other | lineage4.9 | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | ERR987722 | MDR-TB | None | ERR212033 | Other | lineage4.9 | None | ERR4814352 | Other | lineage2.2.1 | None | ERR9786671 | Other | None |
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