TB-Profiler result

Run: ERR9786627

Summary

Run ID: ERR9786627

Sample name:

Date: 2024-10-05T00:45:44.716234

Number of reads: 2764976

Percentage reads mapped: 83.78

Median coverage: 120.0

Strain: lineage4.1.2.1

Spoligotype:

Drug-resistance: Other


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Lineage Table: The lineage is inferred by analysing lineage specific SNPs
Lineage Family RDs Frequency
lineage4.1 Euro-American None 0.96
lineage4.1.2 Euro-American None 0.99
lineage4.1.2.1 Euro-American (Haarlem) RD182 0.99
lineage4 Euro-American None 0.97
Drug resistance: This table reports drug-resistance associated mutations found in known resistance genes
Drug Resistance Supporting mutations WHO confidence Comment
rifampicin
isoniazid
ethambutol embB p.Ala388Gly Mutation from literature
pyrazinamide
streptomycin
fluoroquinolones
moxifloxacin
ofloxacin
levofloxacin
ciprofloxacin
aminoglycosides
amikacin
capreomycin
kanamycin
cycloserine
ethionamide
clofazimine
para-aminosalicylic_acid
delamanid
bedaquiline
linezolid
Drug resistance-Associated Mutations: This table reports mutations found in candidate resistance genes which have been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs Confidence Comment
embB 4247676 p.Ala388Gly missense_variant 0.16 ethambutol Mutation from literature
Non-Associated Mutations: This table reports mutations found in candidate resistance genes which have not been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs Confidence
gyrA 6403 c.-899T>C upstream_gene_variant 0.16 levofloxacin
moxifloxacin
gyrB 6931 c.1692A>G synonymous_variant 0.16 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrB 6952 c.1713C>G synonymous_variant 0.17 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7007 c.-295C>T upstream_gene_variant 0.17 levofloxacin
moxifloxacin
gyrA 7010 c.-292C>T upstream_gene_variant 0.17 levofloxacin
moxifloxacin
gyrB 7023 p.Leu595Gln missense_variant 0.14 levofloxacin
moxifloxacin
gyrA 7362 p.Glu21Gln missense_variant 1.0 levofloxacin Not assoc w R
moxifloxacin Not assoc w R
gyrA 7541 c.240C>G synonymous_variant 0.16 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7547 c.246C>T synonymous_variant 0.17 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7562 c.261C>T synonymous_variant 0.16 levofloxacin
moxifloxacin
gyrA 7571 c.270G>C synonymous_variant 0.17 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7585 p.Ser95Thr missense_variant 1.0 levofloxacin Not assoc w R
moxifloxacin Not assoc w R
gyrA 7595 c.294C>G synonymous_variant 0.19 levofloxacin
moxifloxacin
gyrA 7601 c.300C>G synonymous_variant 0.19 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7607 c.306C>A synonymous_variant 0.18 levofloxacin
moxifloxacin
gyrA 7622 c.321C>T synonymous_variant 0.2 levofloxacin
moxifloxacin
gyrA 7625 c.324G>C synonymous_variant 0.2 levofloxacin
moxifloxacin
gyrA 7631 c.330G>C synonymous_variant 0.19 levofloxacin
moxifloxacin
gyrA 7637 c.336C>G synonymous_variant 0.21 levofloxacin
moxifloxacin
gyrA 7652 c.351C>T synonymous_variant 0.22 levofloxacin
moxifloxacin
gyrA 7658 c.357A>G synonymous_variant 0.22 levofloxacin
moxifloxacin
gyrA 7664 c.363T>C synonymous_variant 0.22 levofloxacin
moxifloxacin
gyrA 7673 c.372G>A synonymous_variant 0.21 levofloxacin
moxifloxacin
gyrA 7683 c.382_384delAGGinsCGC synonymous_variant 0.21 levofloxacin
moxifloxacin
gyrA 7694 c.393A>G synonymous_variant 0.2 levofloxacin
moxifloxacin
gyrA 7697 c.396C>G synonymous_variant 0.2 levofloxacin
moxifloxacin
gyrA 7710 c.409_411delTTGinsCTC synonymous_variant 0.18 levofloxacin
moxifloxacin
gyrA 7715 c.414G>C synonymous_variant 0.17 levofloxacin
moxifloxacin
gyrA 7721 c.420G>A synonymous_variant 0.17 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7725 c.424C>T synonymous_variant 0.17 levofloxacin Not assoc w R - Interim
moxifloxacin
gyrA 7728 c.427_429delAGGinsCGC synonymous_variant 0.17 levofloxacin
moxifloxacin
gyrA 7739 c.438C>T synonymous_variant 0.18 levofloxacin
moxifloxacin Not assoc w R - Interim
gyrA 7763 c.462T>C synonymous_variant 0.19 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7772 c.471C>T synonymous_variant 0.18 levofloxacin Not assoc w R - Interim
moxifloxacin
gyrA 8767 p.Arg489Lys missense_variant 0.15 levofloxacin Uncertain significance
moxifloxacin Uncertain significance
gyrA 8870 c.1569G>C synonymous_variant 0.17 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8897 c.1596T>C synonymous_variant 0.16 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8903 c.1602T>C synonymous_variant 0.17 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 9182 c.1881T>C synonymous_variant 0.17 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 9191 c.1890G>C synonymous_variant 0.16 levofloxacin
moxifloxacin
gyrA 9204 p.Ser635Thr missense_variant 0.16 levofloxacin
moxifloxacin
gyrA 9304 p.Gly668Asp missense_variant 1.0 levofloxacin Not assoc w R
moxifloxacin Not assoc w R
fgd1 490984 p.Leu68Met missense_variant 0.14 pretomanid
delamanid
clofazimine
fgd1 491007 c.225G>C synonymous_variant 0.18 pretomanid
delamanid
clofazimine
fgd1 491043 c.261T>G synonymous_variant 0.17 pretomanid
delamanid
clofazimine
fgd1 491202 c.420G>C synonymous_variant 0.16 pretomanid
delamanid
clofazimine
fgd1 491217 c.435T>C synonymous_variant 0.16 pretomanid
delamanid
clofazimine
fgd1 491232 c.450T>C synonymous_variant 0.16 pretomanid
delamanid
clofazimine
fgd1 491591 p.Lys270Met missense_variant 0.94 pretomanid
delamanid Uncertain significance
clofazimine Not assoc w R
mshA 575665 c.318G>A synonymous_variant 0.15 isoniazid
ethionamide
mshA 575674 c.327G>C synonymous_variant 0.17 isoniazid
ethionamide
mshA 575679 p.Asn111Ser missense_variant 0.84 isoniazid Not assoc w R
ethionamide Not assoc w R
mshA 575695 c.348C>G synonymous_variant 0.16 isoniazid Not assoc w R - Interim
ethionamide
mshA 575701 c.354G>A synonymous_variant 0.16 isoniazid
ethionamide
mshA 575713 c.366G>A synonymous_variant 0.16 isoniazid
ethionamide
mshA 575719 c.372C>T synonymous_variant 0.17 isoniazid Not assoc w R - Interim
ethionamide Not assoc w R - Interim
mshA 575734 c.387T>G synonymous_variant 0.18 isoniazid
ethionamide
mshA 575737 c.390T>C synonymous_variant 0.19 isoniazid
ethionamide
mshA 575755 c.408G>A synonymous_variant 0.16 isoniazid
ethionamide
mshA 575756 c.409C>T synonymous_variant 0.16 isoniazid
ethionamide
mshA 575770 c.423G>A synonymous_variant 0.16 isoniazid
ethionamide
mshA 575771 p.Val142Ser missense_variant 0.16 isoniazid
ethionamide
ccsA 620340 c.450C>G synonymous_variant 0.16 kanamycin
capreomycin
amikacin
ccsA 620346 c.456C>G synonymous_variant 0.17 kanamycin
capreomycin
amikacin
ccsA 620362 p.Ala158Thr missense_variant 0.16 kanamycin
capreomycin
amikacin
Rv0565c 657269 p.Ser68Pro missense_variant 0.93 ethionamide Uncertain significance
nusG 734424 c.171G>A synonymous_variant 0.19 rifampicin
nusG 734442 c.189G>A synonymous_variant 0.21 rifampicin
nusG 734451 c.198G>C synonymous_variant 0.21 rifampicin
nusG 734457 c.204C>G synonymous_variant 0.21 rifampicin
nusG 734472 c.219T>C synonymous_variant 0.22 rifampicin
nusG 734475 c.222T>C synonymous_variant 0.21 rifampicin Not assoc w R - Interim
nusG 734532 c.279A>G synonymous_variant 0.24 rifampicin Not assoc w R - Interim
nusG 734556 c.303C>T synonymous_variant 0.22 rifampicin
nusG 734559 c.306T>C synonymous_variant 0.22 rifampicin
nusG 734580 c.327T>C synonymous_variant 0.22 rifampicin Not assoc w R - Interim
nusG 734589 c.336G>C synonymous_variant 0.2 rifampicin
nusG 734596 c.343T>C synonymous_variant 0.22 rifampicin
nusG 734601 c.348C>G synonymous_variant 0.2 rifampicin
nusG 734610 c.357C>G synonymous_variant 0.17 rifampicin
rpoB 760115 c.309C>T synonymous_variant 0.85 rifampicin Not assoc w R
rpoB 760139 c.333A>G synonymous_variant 0.16 rifampicin Not assoc w R - Interim
rpoB 760142 c.336C>G synonymous_variant 0.16 rifampicin
rpoB 760181 c.375T>C synonymous_variant 0.22 rifampicin Not assoc w R - Interim
rpoB 760184 c.378A>G synonymous_variant 0.23 rifampicin Not assoc w R - Interim
rpoB 760196 c.390C>G synonymous_variant 0.24 rifampicin Not assoc w R - Interim
rpoB 760223 c.417T>C synonymous_variant 0.24 rifampicin
rpoB 760235 c.429T>C synonymous_variant 0.23 rifampicin Not assoc w R - Interim
rpoB 760283 c.477G>C synonymous_variant 0.25 rifampicin Not assoc w R - Interim
rpoB 760298 c.492G>C synonymous_variant 0.21 rifampicin Not assoc w R - Interim
rpoB 760307 c.501T>C synonymous_variant 0.23 rifampicin
rpoB 760310 c.504G>C synonymous_variant 0.23 rifampicin
rpoB 760319 c.513C>T synonymous_variant 0.23 rifampicin
rpoB 760328 c.522G>C synonymous_variant 0.22 rifampicin
rpoB 760331 c.525G>C synonymous_variant 0.21 rifampicin
rpoB 760340 c.534G>T synonymous_variant 0.21 rifampicin Not assoc w R - Interim
rpoB 760361 c.555T>C synonymous_variant 0.22 rifampicin Not assoc w R - Interim
rpoB 760370 c.564C>G synonymous_variant 0.22 rifampicin
rpoB 760376 p.Asp190Glu missense_variant 0.21 rifampicin Uncertain significance
rpoB 760380 p.Thr192Leu missense_variant 0.21 rifampicin
rpoB 760406 c.600G>C synonymous_variant 0.22 rifampicin
rpoB 760412 c.606C>G synonymous_variant 0.22 rifampicin
rpoB 760424 c.618C>G synonymous_variant 0.23 rifampicin Not assoc w R - Interim
rpoB 760430 c.624T>C synonymous_variant 0.23 rifampicin Not assoc w R - Interim
rpoB 760475 c.669A>G synonymous_variant 0.18 rifampicin Not assoc w R - Interim
rpoB 760481 c.675G>C synonymous_variant 0.18 rifampicin Not assoc w R - Interim
rpoB 760484 c.678A>G synonymous_variant 0.17 rifampicin Not assoc w R - Interim
rpoB 760541 c.735G>C synonymous_variant 0.17 rifampicin Not assoc w R - Interim
rpoB 760547 c.741G>C synonymous_variant 0.18 rifampicin Not assoc w R - Interim
rpoB 760563 p.Arg253Met missense_variant 0.17 rifampicin Uncertain significance
rpoB 760591 p.Val262Ala missense_variant 0.19 rifampicin
rpoB 760634 c.828T>C synonymous_variant 0.17 rifampicin Not assoc w R - Interim
rpoB 760670 c.864G>C synonymous_variant 0.16 rifampicin
rpoB 760718 c.912C>T synonymous_variant 0.19 rifampicin
rpoB 760724 c.918T>C synonymous_variant 0.17 rifampicin Not assoc w R - Interim
rpoB 760934 c.1128C>T synonymous_variant 0.15 rifampicin
rpoB 760982 c.1176G>C synonymous_variant 0.19 rifampicin Not assoc w R - Interim
rpoB 760985 c.1179G>C synonymous_variant 0.2 rifampicin Not assoc w R - Interim
rpoB 760991 c.1185G>C synonymous_variant 0.19 rifampicin
rpoB 761006 c.1200C>G synonymous_variant 0.22 rifampicin Not assoc w R - Interim
rpoB 761015 c.1209G>C synonymous_variant 0.22 rifampicin Not assoc w R - Interim
rpoB 761021 c.1215G>C synonymous_variant 0.23 rifampicin
rpoB 761027 c.1221A>G synonymous_variant 0.23 rifampicin Not assoc w R - Interim
rpoB 761036 c.1230G>C synonymous_variant 0.23 rifampicin Not assoc w R - Interim
rpoB 761037 c.1231T>C synonymous_variant 0.23 rifampicin Not assoc w R - Interim
rpoB 761057 c.1251G>C synonymous_variant 0.24 rifampicin Not assoc w R - Interim
rpoB 761102 c.1296A>G synonymous_variant 0.25 rifampicin
rpoB 761123 c.1317G>C synonymous_variant 0.24 rifampicin
rpoB 761129 c.1323G>C synonymous_variant 0.23 rifampicin Not assoc w R - Interim
rpoB 761132 c.1326G>T synonymous_variant 0.23 rifampicin Not assoc w R - Interim
rpoB 761133 c.1327T>C synonymous_variant 0.24 rifampicin Not assoc w R - Interim
rpoB 761150 c.1344A>C synonymous_variant 0.28 rifampicin Not assoc w R - Interim
rpoB 761153 c.1347G>C synonymous_variant 0.28 rifampicin
rpoB 761165 c.1359G>C synonymous_variant 0.25 rifampicin Not assoc w R - Interim
rpoB 761180 c.1374A>C synonymous_variant 0.25 rifampicin Not assoc w R - Interim
rpoB 761189 c.1383T>C synonymous_variant 0.24 rifampicin Not assoc w R - Interim
rpoB 761195 c.1389G>C synonymous_variant 0.25 rifampicin Not assoc w R - Interim
rpoB 761207 c.1401C>T synonymous_variant 0.26 rifampicin
rpoB 761213 c.1407G>C synonymous_variant 0.24 rifampicin
rpoB 761219 c.1413G>C synonymous_variant 0.23 rifampicin Not assoc w R - Interim
rpoB 761249 c.1443A>G synonymous_variant 0.19 rifampicin Not assoc w R - Interim
rpoB 761255 c.1449T>G synonymous_variant 0.19 rifampicin Not assoc w R - Interim
rpoB 761261 c.1455G>T synonymous_variant 0.21 rifampicin Not assoc w R - Interim
rpoB 761306 c.1500C>G synonymous_variant 0.23 rifampicin
rpoB 761327 c.1521A>G synonymous_variant 0.24 rifampicin Not assoc w R - Interim
rpoB 761330 c.1524G>C synonymous_variant 0.24 rifampicin
rpoB 761354 c.1548C>T synonymous_variant 0.26 rifampicin
rpoB 761360 c.1554T>C synonymous_variant 0.24 rifampicin Not assoc w R - Interim
rpoB 761362 p.Ser519Thr missense_variant 0.24 rifampicin
rpoB 761373 p.Val523His missense_variant 0.2 rifampicin
rpoB 761408 c.1602G>C synonymous_variant 0.22 rifampicin
rpoB 761414 c.1608A>G synonymous_variant 0.22 rifampicin Not assoc w R - Interim
rpoB 761423 c.1617T>C synonymous_variant 0.22 rifampicin
rpoB 761435 c.1629T>C synonymous_variant 0.21 rifampicin
rpoB 761438 c.1632G>C synonymous_variant 0.21 rifampicin
rpoB 761439 p.Asp545Lys missense_variant 0.21 rifampicin
rpoB 761444 c.1638T>C synonymous_variant 0.22 rifampicin
rpoB 761447 c.1641C>G synonymous_variant 0.21 rifampicin
rpoB 761452 p.Val549Glu missense_variant 0.21 rifampicin
rpoB 761457 p.Pro551Ser missense_variant 0.21 rifampicin
rpoB 761477 c.1671C>G synonymous_variant 0.22 rifampicin
rpoB 761492 c.1686G>C synonymous_variant 0.22 rifampicin
rpoB 761510 c.1704T>C synonymous_variant 0.23 rifampicin
rpoB 761537 c.1731C>G synonymous_variant 0.2 rifampicin Not assoc w R - Interim
rpoB 761570 c.1764T>C synonymous_variant 0.19 rifampicin Not assoc w R - Interim
rpoB 761573 c.1767C>G synonymous_variant 0.19 rifampicin Not assoc w R - Interim
rpoB 761579 c.1773G>C synonymous_variant 0.2 rifampicin Not assoc w R - Interim
rpoB 761588 c.1782C>T synonymous_variant 0.22 rifampicin
rpoB 761606 c.1800C>G synonymous_variant 0.19 rifampicin
rpoB 761612 c.1806G>C synonymous_variant 0.18 rifampicin Not assoc w R - Interim
rpoB 761615 c.1809A>C synonymous_variant 0.18 rifampicin Not assoc w R - Interim
rpoB 761636 c.1830G>T synonymous_variant 0.2 rifampicin Not assoc w R - Interim
rpoB 761645 c.1839C>G synonymous_variant 0.2 rifampicin Not assoc w R - Interim
rpoB 761648 c.1842T>C synonymous_variant 0.2 rifampicin
rpoB 761657 c.1851C>G synonymous_variant 0.19 rifampicin Not assoc w R - Interim
rpoB 761675 c.1869G>C synonymous_variant 0.2 rifampicin
rpoB 761720 c.1914_1916delCGAinsGG frameshift_variant&synonymous_variant 0.22 rifampicin
rpoB 761727 p.Ser641Gly missense_variant 0.21 rifampicin
rpoB 761728 c.1923dupC frameshift_variant 0.22 rifampicin
rpoB 761732 c.1926C>G synonymous_variant 0.22 rifampicin Not assoc w R - Interim
rpoB 761735 c.1929C>G synonymous_variant 0.21 rifampicin
rpoB 761747 c.1941G>C synonymous_variant 0.22 rifampicin
rpoB 761750 c.1944G>C synonymous_variant 0.22 rifampicin
rpoB 761765 c.1959T>C synonymous_variant 0.23 rifampicin
rpoB 761772 p.His656Ala missense_variant 0.21 rifampicin
rpoB 761778 p.Asn658Asp missense_variant 0.21 rifampicin
rpoB 761791 p.Arg662His missense_variant 0.2 rifampicin
rpoB 761813 c.2007T>C synonymous_variant 0.18 rifampicin
rpoB 761815 p.Ala670Glu missense_variant 0.18 rifampicin
rpoB 761834 c.2028T>C synonymous_variant 0.21 rifampicin
rpoB 761848 p.Cys681Ser missense_variant 0.18 rifampicin
rpoB 761852 c.2046C>G synonymous_variant 0.19 rifampicin
rpoB 761858 c.2052G>C synonymous_variant 0.19 rifampicin
rpoB 761873 c.2067A>C synonymous_variant 0.22 rifampicin
rpoB 761885 c.2079T>C synonymous_variant 0.22 rifampicin
rpoB 761906 c.2100C>G synonymous_variant 0.2 rifampicin
rpoB 761909 c.2103T>C synonymous_variant 0.19 rifampicin
rpoB 761912 c.2106T>C synonymous_variant 0.2 rifampicin
rpoB 761915 p.Asp703Glu missense_variant 0.2 rifampicin
rpoB 761916 p.Asp704Asn missense_variant 0.2 rifampicin
rpoB 761948 c.2142G>C synonymous_variant 0.2 rifampicin Not assoc w R - Interim
rpoB 761954 c.2148C>G synonymous_variant 0.22 rifampicin Not assoc w R - Interim
rpoB 762008 c.2202C>T synonymous_variant 0.19 rifampicin Not assoc w R - Interim
rpoB 762014 c.2208C>T synonymous_variant 0.18 rifampicin
rpoB 762017 c.2211A>G synonymous_variant 0.18 rifampicin Not assoc w R - Interim
rpoB 762053 c.2247T>C synonymous_variant 0.19 rifampicin Not assoc w R - Interim
rpoB 762062 c.2256T>C synonymous_variant 0.19 rifampicin Not assoc w R - Interim
rpoB 762065 c.2259T>C synonymous_variant 0.19 rifampicin Not assoc w R - Interim
rpoB 762083 c.2277T>C synonymous_variant 0.19 rifampicin Not assoc w R - Interim
rpoB 762086 c.2280G>C synonymous_variant 0.19 rifampicin Not assoc w R - Interim
rpoB 762101 c.2295C>G synonymous_variant 0.2 rifampicin Not assoc w R - Interim
rpoB 762114 p.Ile770Val missense_variant 0.2 rifampicin Uncertain significance
rpoB 762131 c.2325C>G synonymous_variant 0.21 rifampicin
rpoB 762140 c.2334G>C synonymous_variant 0.23 rifampicin
rpoB 762143 c.2337T>C synonymous_variant 0.22 rifampicin
rpoB 762149 c.2343G>C synonymous_variant 0.23 rifampicin Not assoc w R - Interim
rpoB 762167 c.2361T>C synonymous_variant 0.24 rifampicin Not assoc w R - Interim
rpoB 762176 c.2370T>C synonymous_variant 0.22 rifampicin Not assoc w R - Interim
rpoB 762185 c.2379G>C synonymous_variant 0.21 rifampicin Not assoc w R - Interim
rpoB 762206 c.2400C>G synonymous_variant 0.19 rifampicin
rpoB 762233 c.2427G>C synonymous_variant 0.22 rifampicin Not assoc w R - Interim
rpoB 762246 c.2440C>T synonymous_variant 0.2 rifampicin
rpoB 762254 c.2448T>G synonymous_variant 0.19 rifampicin
rpoB 762257 c.2451C>G synonymous_variant 0.18 rifampicin
rpoB 762266 c.2460T>C synonymous_variant 0.17 rifampicin
rpoB 762284 c.2478G>C synonymous_variant 0.16 rifampicin Not assoc w R - Interim
rpoB 762317 c.2511A>G synonymous_variant 0.18 rifampicin Not assoc w R - Interim
rpoB 762329 c.2523G>C synonymous_variant 0.17 rifampicin Not assoc w R - Interim
rpoB 762338 c.2532T>C synonymous_variant 0.18 rifampicin
rpoB 762347 c.2541T>C synonymous_variant 0.18 rifampicin
rpoB 762362 p.Glu852Asp missense_variant 0.18 rifampicin
rpoB 762369 c.2563T>C synonymous_variant 0.19 rifampicin
rpoC 762398 c.-972T>C upstream_gene_variant 0.2 rifampicin
rpoC 762401 c.-969G>C upstream_gene_variant 0.2 rifampicin
rpoB 762404 c.2598T>C synonymous_variant 0.21 rifampicin Not assoc w R - Interim
rpoC 762410 c.-960T>C upstream_gene_variant 0.23 rifampicin
rpoB 762416 c.2610A>G synonymous_variant 0.23 rifampicin Not assoc w R - Interim
rpoC 762419 c.-951C>G upstream_gene_variant 0.23 rifampicin
rpoC 762434 c.-936T>C upstream_gene_variant 0.22 rifampicin
rpoB 762449 c.2643C>A synonymous_variant 0.22 rifampicin Not assoc w R - Interim
rpoC 762467 c.-903C>T upstream_gene_variant 0.21 rifampicin
rpoB 762490 p.Val895Asp missense_variant 0.16 rifampicin
rpoC 762509 c.-861T>G upstream_gene_variant 0.17 rifampicin
rpoB 762510 p.Ala902Pro missense_variant 0.17 rifampicin Uncertain significance
rpoC 762521 c.-849C>T upstream_gene_variant 0.18 rifampicin
rpoB 762929 c.3123G>C synonymous_variant 0.25 rifampicin Not assoc w R - Interim
rpoC 762989 c.-381G>C upstream_gene_variant 0.25 rifampicin
rpoB 762995 c.3189G>T synonymous_variant 0.24 rifampicin Not assoc w R - Interim
rpoC 763013 c.-357C>G upstream_gene_variant 0.24 rifampicin
rpoB 763028 c.3222T>C synonymous_variant 0.26 rifampicin Not assoc w R - Interim
rpoB 763031 c.3225T>G synonymous_variant 0.26 rifampicin Not assoc w R - Interim
rpoB 763034 c.3228C>G synonymous_variant 0.25 rifampicin Not assoc w R - Interim
rpoB 763040 c.3234C>G synonymous_variant 0.25 rifampicin Not assoc w R - Interim
rpoB 763070 c.3264T>C synonymous_variant 0.24 rifampicin Not assoc w R - Interim
rpoB 763085 c.3279C>G synonymous_variant 0.21 rifampicin Not assoc w R - Interim
rpoB 763115 c.3309T>C synonymous_variant 0.17 rifampicin Not assoc w R - Interim
rpoB 763136 c.3330C>T synonymous_variant 0.17 rifampicin Not assoc w R - Interim
rpoC 763148 c.-222G>C upstream_gene_variant 0.17 rifampicin
rpoC 763190 c.-180C>T upstream_gene_variant 0.16 rifampicin
rpoC 763402 c.33C>G synonymous_variant 0.19 rifampicin
rpoC 763411 c.42T>G synonymous_variant 0.21 rifampicin Not assoc w R - Interim
rpoC 763414 c.45T>C synonymous_variant 0.21 rifampicin
rpoC 763441 c.72C>T synonymous_variant 0.25 rifampicin
rpoC 763444 c.75T>C synonymous_variant 0.25 rifampicin Not assoc w R - Interim
rpoC 763456 c.87A>G synonymous_variant 0.29 rifampicin Not assoc w R - Interim
rpoC 763486 c.117T>G synonymous_variant 0.29 rifampicin
rpoC 763528 c.159G>A synonymous_variant 0.3 rifampicin Not assoc w R - Interim
rpoC 763546 c.177A>G synonymous_variant 0.31 rifampicin Not assoc w R - Interim
rpoC 763570 c.201G>C synonymous_variant 0.29 rifampicin Not assoc w R - Interim
rpoC 763573 c.204G>C synonymous_variant 0.29 rifampicin Not assoc w R - Interim
rpoC 763594 c.225C>T synonymous_variant 0.28 rifampicin Not assoc w R - Interim
rpoC 763603 c.234C>T synonymous_variant 0.29 rifampicin Not assoc w R - Interim
rpoC 763633 c.264T>C synonymous_variant 0.28 rifampicin Not assoc w R - Interim
rpoC 763636 c.267T>C synonymous_variant 0.27 rifampicin
rpoC 763660 c.291T>G synonymous_variant 0.27 rifampicin Not assoc w R - Interim
rpoC 763675 c.306C>G synonymous_variant 0.25 rifampicin Not assoc w R - Interim
rpoC 763696 c.327T>C synonymous_variant 0.25 rifampicin Not assoc w R - Interim
rpoC 763702 c.333C>G synonymous_variant 0.25 rifampicin Not assoc w R - Interim
rpoC 763717 c.348T>C synonymous_variant 0.23 rifampicin Not assoc w R - Interim
rpoC 763723 c.354G>C synonymous_variant 0.23 rifampicin
rpoC 763732 c.363C>G synonymous_variant 0.25 rifampicin
rpoC 763741 c.372C>T synonymous_variant 0.26 rifampicin
rpoC 763744 c.375G>C synonymous_variant 0.26 rifampicin
rpoC 763765 c.396T>C synonymous_variant 0.26 rifampicin
rpoC 763774 c.405G>C synonymous_variant 0.26 rifampicin
rpoC 763807 c.438T>C synonymous_variant 0.24 rifampicin Not assoc w R - Interim
rpoC 763816 c.447C>G synonymous_variant 0.23 rifampicin
rpoC 763835 p.Ala156Met missense_variant 0.19 rifampicin
rpoC 763853 p.Val162Ile missense_variant 0.19 rifampicin
rpoC 763858 c.489A>G synonymous_variant 0.19 rifampicin
rpoC 763872 p.Gly168Ala missense_variant 0.19 rifampicin
rpoC 763876 p.Glu169Asp missense_variant 0.19 rifampicin
rpoC 763879 c.510A>G synonymous_variant 0.19 rifampicin
rpoC 763888 c.519G>C synonymous_variant 0.18 rifampicin
rpoC 763891 c.522G>C synonymous_variant 0.18 rifampicin
rpoC 763894 c.525A>G synonymous_variant 0.18 rifampicin
rpoC 763900 c.531G>C synonymous_variant 0.19 rifampicin Not assoc w R - Interim
rpoC 763936 c.567C>G synonymous_variant 0.2 rifampicin
rpoC 763939 c.570G>A synonymous_variant 0.2 rifampicin
rpoC 763942 c.573C>G synonymous_variant 0.2 rifampicin Not assoc w R - Interim
rpoC 763945 c.576T>C synonymous_variant 0.2 rifampicin
rpoC 763948 c.579G>A synonymous_variant 0.2 rifampicin Not assoc w R - Interim
rpoC 763949 c.580C>A synonymous_variant 0.2 rifampicin
rpoC 763954 c.585C>G synonymous_variant 0.21 rifampicin
rpoC 763963 c.594C>T synonymous_variant 0.22 rifampicin Not assoc w R - Interim
rpoC 763987 c.618C>T synonymous_variant 0.22 rifampicin
rpoC 763991 p.Ile208Leu missense_variant 0.19 rifampicin
rpoC 763996 c.627T>C synonymous_variant 0.2 rifampicin
rpoC 764002 c.633C>G synonymous_variant 0.22 rifampicin
rpoC 764005 c.636G>C synonymous_variant 0.22 rifampicin Not assoc w R - Interim
rpoC 764024 c.655_657delTTGinsCTC synonymous_variant 0.2 rifampicin
rpoC 764032 p.Asp221Glu missense_variant 0.2 rifampicin
rpoC 764040 p.Ser224Thr missense_variant 0.2 rifampicin
rpoC 764044 c.675T>C synonymous_variant 0.2 rifampicin
rpoC 764059 c.690G>T synonymous_variant 0.21 rifampicin
rpoC 764083 c.714A>G synonymous_variant 0.22 rifampicin
rpoC 764098 c.729A>G synonymous_variant 0.2 rifampicin Not assoc w R - Interim
rpoC 764101 c.732C>G synonymous_variant 0.2 rifampicin Not assoc w R - Interim
rpoC 764102 p.Val245Ile missense_variant 0.19 rifampicin
rpoC 764107 c.738C>T synonymous_variant 0.18 rifampicin Not assoc w R - Interim
rpoC 764112 p.Tyr248Phe missense_variant 0.18 rifampicin
rpoC 764116 c.747C>T synonymous_variant 0.19 rifampicin Not assoc w R - Interim
rpoC 764131 c.762T>C synonymous_variant 0.2 rifampicin
rpoC 764140 c.771C>T synonymous_variant 0.2 rifampicin Not assoc w R - Interim
rpoC 764195 p.Ser276Thr missense_variant 0.16 rifampicin
rpoC 764203 c.834G>C synonymous_variant 0.16 rifampicin
rpoC 764215 c.846A>G synonymous_variant 0.19 rifampicin
rpoC 764236 c.867G>A synonymous_variant 0.21 rifampicin Not assoc w R - Interim
rpoC 764248 c.879C>G synonymous_variant 0.21 rifampicin Not assoc w R - Interim
rpoC 764257 c.888G>C synonymous_variant 0.18 rifampicin
rpoC 764338 c.969G>A synonymous_variant 0.19 rifampicin Not assoc w R - Interim
rpoC 764353 c.984G>C synonymous_variant 0.19 rifampicin
rpoC 764365 c.996C>T synonymous_variant 0.18 rifampicin Not assoc w R - Interim
rpoC 764380 c.1011G>C synonymous_variant 0.17 rifampicin Not assoc w R - Interim
rpoC 764381 p.Ser338Thr missense_variant 0.16 rifampicin
rpoC 764389 p.Leu340Phe missense_variant 0.17 rifampicin Uncertain significance
rpoC 764405 c.1036A>C synonymous_variant 0.21 rifampicin Not assoc w R - Interim
rpoC 764419 c.1050C>G synonymous_variant 0.24 rifampicin
rpoC 764431 c.1062G>C synonymous_variant 0.25 rifampicin Not assoc w R - Interim
rpoC 764434 c.1065A>G synonymous_variant 0.24 rifampicin Not assoc w R - Interim
rpoC 764446 c.1077T>C synonymous_variant 0.23 rifampicin
rpoC 764449 c.1080G>C synonymous_variant 0.23 rifampicin
rpoC 764452 c.1083T>C synonymous_variant 0.23 rifampicin
rpoC 764458 c.1089G>C synonymous_variant 0.24 rifampicin Not assoc w R - Interim
rpoC 764461 c.1092A>G synonymous_variant 0.24 rifampicin Not assoc w R - Interim
rpoC 764489 c.1120C>T synonymous_variant 0.29 rifampicin
rpoC 764497 c.1128A>G synonymous_variant 0.3 rifampicin Not assoc w R - Interim
rpoC 764510 c.1141C>T synonymous_variant 0.3 rifampicin Not assoc w R - Interim
rpoC 764521 c.1152T>C synonymous_variant 0.3 rifampicin Not assoc w R - Interim
rpoC 764527 c.1158C>T synonymous_variant 0.31 rifampicin Not assoc w R - Interim
rpoC 764536 c.1167G>C synonymous_variant 0.31 rifampicin
rpoC 764539 c.1170C>G synonymous_variant 0.3 rifampicin Not assoc w R - Interim
rpoC 764554 c.1185C>T synonymous_variant 0.3 rifampicin
rpoC 764560 c.1191T>C synonymous_variant 0.29 rifampicin Not assoc w R - Interim
rpoC 764566 c.1197C>G synonymous_variant 0.3 rifampicin Not assoc w R - Interim
rpoC 764575 c.1206T>G synonymous_variant 0.32 rifampicin Not assoc w R - Interim
rpoC 764581 c.1212T>C synonymous_variant 0.31 rifampicin
rpoC 764593 c.1224C>T synonymous_variant 0.31 rifampicin
rpoC 764611 c.1242G>T synonymous_variant 0.31 rifampicin Not assoc w R - Interim
rpoC 764650 c.1281G>C synonymous_variant 0.28 rifampicin
rpoC 764651 c.1282_1284delTCGinsAGC synonymous_variant 0.28 rifampicin
rpoC 764752 c.1383G>C synonymous_variant 0.29 rifampicin Not assoc w R - Interim
rpoC 764764 c.1395T>C synonymous_variant 0.31 rifampicin Not assoc w R - Interim
rpoC 764809 c.1440C>T synonymous_variant 0.28 rifampicin Not assoc w R
rpoC 764815 c.1446A>G synonymous_variant 0.28 rifampicin Not assoc w R - Interim
rpoC 764827 c.1458G>C synonymous_variant 0.31 rifampicin Not assoc w R - Interim
rpoC 764858 c.1489T>C synonymous_variant 0.26 rifampicin Not assoc w R - Interim
rpoC 764872 c.1503A>G synonymous_variant 0.25 rifampicin Not assoc w R - Interim
rpoC 764888 c.1519T>C synonymous_variant 0.24 rifampicin Not assoc w R - Interim
rpoC 764911 c.1542A>G synonymous_variant 0.25 rifampicin
rpoC 764932 c.1563C>A synonymous_variant 0.2 rifampicin Not assoc w R - Interim
rpoC 764935 c.1566T>C synonymous_variant 0.2 rifampicin
rpoC 764948 c.1579T>C synonymous_variant 0.2 rifampicin Not assoc w R - Interim
rpoC 764968 c.1599T>C synonymous_variant 0.2 rifampicin Not assoc w R - Interim
rpoC 764995 c.1626C>G synonymous_variant 0.21 rifampicin Not assoc w R
rpoC 765019 c.1650A>G synonymous_variant 0.19 rifampicin Not assoc w R - Interim
rpoC 765034 c.1665T>C synonymous_variant 0.18 rifampicin
rpoC 765040 c.1671T>C synonymous_variant 0.17 rifampicin Not assoc w R - Interim
rpoC 765041 c.1672T>C synonymous_variant 0.17 rifampicin Not assoc w R - Interim
rpoC 765047 c.1678T>C synonymous_variant 0.19 rifampicin Not assoc w R - Interim
rpoC 765053 c.1684_1685delTCinsAG synonymous_variant 0.19 rifampicin
rpoC 765150 p.Gly594Glu missense_variant 0.96 rifampicin Not assoc w R
rpoC 765383 p.Met672Leu missense_variant 0.22 rifampicin Uncertain significance
rpoC 765404 p.Leu679Val missense_variant 0.24 rifampicin
rpoC 765409 c.2040T>C synonymous_variant 0.23 rifampicin
rpoC 765421 c.2052C>G synonymous_variant 0.22 rifampicin Not assoc w R - Interim
rpoC 765478 c.2109T>C synonymous_variant 0.29 rifampicin Not assoc w R - Interim
rpoC 765499 c.2130C>G synonymous_variant 0.32 rifampicin Not assoc w R - Interim
rpoC 765529 c.2160C>T synonymous_variant 0.34 rifampicin
rpoC 765541 c.2172C>G synonymous_variant 0.34 rifampicin
rpoC 765553 c.2184C>T synonymous_variant 0.3 rifampicin Not assoc w R - Interim
rpoC 765556 c.2187G>C synonymous_variant 0.31 rifampicin
rpoC 765559 c.2190G>C synonymous_variant 0.29 rifampicin
rpoC 765580 c.2211G>C synonymous_variant 0.3 rifampicin
rpoC 765613 p.His748Gln missense_variant 0.3 rifampicin
rpoC 765625 c.2256C>G synonymous_variant 0.27 rifampicin Not assoc w R - Interim
rpoC 765631 p.Asp754Glu missense_variant 0.27 rifampicin
rpoC 765700 c.2331T>C synonymous_variant 0.31 rifampicin Not assoc w R - Interim
rpoC 765734 c.2365T>C synonymous_variant 0.29 rifampicin Not assoc w R - Interim
rpoC 765739 c.2370G>T synonymous_variant 0.28 rifampicin
rpoC 765751 c.2382C>G synonymous_variant 0.26 rifampicin
rpoC 765753 p.Asp795Ala missense_variant 0.26 rifampicin Uncertain significance
rpoC 765772 c.2403C>G synonymous_variant 0.3 rifampicin
rpoC 765784 c.2415C>G synonymous_variant 0.3 rifampicin
rpoC 765787 c.2418C>T synonymous_variant 0.3 rifampicin
rpoC 765793 c.2424C>G synonymous_variant 0.3 rifampicin
rpoC 765796 c.2427C>T synonymous_variant 0.3 rifampicin
rpoC 765811 c.2442T>C synonymous_variant 0.31 rifampicin Not assoc w R - Interim
rpoC 765814 c.2445A>G synonymous_variant 0.33 rifampicin Not assoc w R - Interim
rpoC 765826 c.2457T>C synonymous_variant 0.32 rifampicin Not assoc w R - Interim
rpoC 765835 c.2466C>T synonymous_variant 0.31 rifampicin Not assoc w R - Interim
rpoC 765850 c.2481G>C synonymous_variant 0.34 rifampicin Not assoc w R - Interim
rpoC 765883 c.2514C>G synonymous_variant 0.3 rifampicin
rpoC 765886 c.2517C>G synonymous_variant 0.3 rifampicin
rpoC 765892 c.2523T>C synonymous_variant 0.31 rifampicin Not assoc w R - Interim
rpoC 765937 c.2568T>C synonymous_variant 0.33 rifampicin Not assoc w R - Interim
rpoC 765967 c.2598C>T synonymous_variant 0.32 rifampicin Not assoc w R - Interim
rpoC 765982 c.2613C>G synonymous_variant 0.3 rifampicin
rpoC 765994 c.2625A>T synonymous_variant 0.29 rifampicin Not assoc w R - Interim
rpoC 766010 c.2641_2642delTCinsAG synonymous_variant 0.26 rifampicin
rpoC 766021 c.2652G>C synonymous_variant 0.27 rifampicin
rpoC 766027 c.2658G>C synonymous_variant 0.28 rifampicin
rpoC 766030 c.2661C>G synonymous_variant 0.28 rifampicin
rpoC 766043 p.Gln892Glu missense_variant 0.27 rifampicin
rpoC 766054 c.2685C>G synonymous_variant 0.28 rifampicin
rpoC 766082 p.Ala905Gln missense_variant 0.26 rifampicin
rpoC 766096 c.2727G>C synonymous_variant 0.27 rifampicin
rpoC 766129 c.2760C>G synonymous_variant 0.22 rifampicin
rpoC 766135 c.2766G>A synonymous_variant 0.21 rifampicin Not assoc w R - Interim
rpoC 766141 c.2772C>T synonymous_variant 0.2 rifampicin
rpoC 766142 c.2773C>T synonymous_variant 0.2 rifampicin Not assoc w R - Interim
rpoC 766357 c.2988C>T synonymous_variant 0.17 rifampicin
rpoC 766363 c.2994G>C synonymous_variant 0.18 rifampicin
rpoC 766381 c.3012C>T synonymous_variant 0.21 rifampicin
rpoC 766384 c.3015A>G synonymous_variant 0.22 rifampicin
rpoC 766408 c.3039C>G synonymous_variant 0.22 rifampicin
rpoC 766411 c.3042C>G synonymous_variant 0.23 rifampicin
rpoC 766426 c.3057C>T synonymous_variant 0.28 rifampicin
rpoC 766447 c.3078T>C synonymous_variant 0.28 rifampicin
rpoC 766462 c.3093G>C synonymous_variant 0.27 rifampicin
rpoC 766483 c.3114G>C synonymous_variant 0.26 rifampicin
rpoC 766484 p.Val1039Ile missense_variant 0.26 rifampicin Uncertain significance
rpoC 766492 c.3123T>C synonymous_variant 0.28 rifampicin
rpoC 766522 c.3153C>G synonymous_variant 0.26 rifampicin
rpoC 766528 c.3159T>C synonymous_variant 0.25 rifampicin
rpoC 766531 c.3162G>C synonymous_variant 0.27 rifampicin
rpoC 766540 p.Asp1057Glu missense_variant 0.28 rifampicin
rpoC 766549 c.3180G>C synonymous_variant 0.25 rifampicin
rpoC 766573 c.3204T>C synonymous_variant 0.27 rifampicin
rpoC 766582 c.3213C>G synonymous_variant 0.26 rifampicin
rpoC 766583 p.Gly1072Ser missense_variant 0.26 rifampicin
rpoC 766591 c.3222A>G synonymous_variant 0.26 rifampicin
rpoC 766594 c.3225G>C synonymous_variant 0.26 rifampicin
rpoC 766597 c.3228C>G synonymous_variant 0.27 rifampicin Not assoc w R - Interim
rpoC 766607 p.Ile1080Leu missense_variant 0.3 rifampicin
rpoC 766625 c.3256C>T synonymous_variant 0.26 rifampicin Not assoc w R - Interim
rpoC 766630 c.3261G>C synonymous_variant 0.25 rifampicin
rpoC 766657 c.3288A>G synonymous_variant 0.23 rifampicin
rpoC 766672 c.3303T>C synonymous_variant 0.2 rifampicin
rpoC 766673 p.Gly1102Asn missense_variant 0.2 rifampicin
rpoC 766726 c.3357T>C synonymous_variant 0.23 rifampicin
rpoC 766738 c.3369G>C synonymous_variant 0.22 rifampicin
rpoC 766765 c.3396A>C synonymous_variant 0.21 rifampicin Not assoc w R - Interim
rpoC 766774 c.3405T>C synonymous_variant 0.21 rifampicin
rpoC 766801 c.3432C>G synonymous_variant 0.23 rifampicin
rpoC 766804 c.3435A>G synonymous_variant 0.25 rifampicin Not assoc w R - Interim
rpoC 766861 c.3492G>C synonymous_variant 0.25 rifampicin Not assoc w R - Interim
rpoC 766864 c.3495G>C synonymous_variant 0.25 rifampicin
rpoC 766876 c.3507C>T synonymous_variant 0.27 rifampicin Not assoc w R - Interim
rpoC 766882 c.3513C>T synonymous_variant 0.27 rifampicin Not assoc w R - Interim
rpoC 766900 c.3531T>C synonymous_variant 0.29 rifampicin
rpoC 766933 c.3564A>G synonymous_variant 0.26 rifampicin
rpoC 766945 c.3576A>G synonymous_variant 0.3 rifampicin Not assoc w R - Interim
rpoC 766963 c.3594T>C synonymous_variant 0.31 rifampicin Not assoc w R - Interim
rpoC 766972 c.3603G>C synonymous_variant 0.3 rifampicin
rpoC 766996 c.3627C>T synonymous_variant 0.28 rifampicin Not assoc w R - Interim
rpoC 767009 c.3640_3642delTCGinsAGC synonymous_variant 0.28 rifampicin
rpoC 767014 c.3645G>C synonymous_variant 0.28 rifampicin
rpoC 767033 c.3664_3666delTCGinsAGC synonymous_variant 0.3 rifampicin
rpoC 767059 c.3690T>G synonymous_variant 0.31 rifampicin Not assoc w R - Interim
rpoC 767062 c.3693C>A synonymous_variant 0.31 rifampicin
rpoC 767098 c.3729T>C synonymous_variant 0.26 rifampicin Not assoc w R - Interim
rpoC 767111 c.3742C>T synonymous_variant 0.25 rifampicin
rpoC 767119 c.3750A>G synonymous_variant 0.25 rifampicin Not assoc w R - Interim
rpoC 767134 c.3765C>A synonymous_variant 0.25 rifampicin
rpoC 767158 c.3789T>G synonymous_variant 0.21 rifampicin
rpoC 767180 p.Ala1271Gln missense_variant 0.16 rifampicin
rpoC 767206 c.3837C>G synonymous_variant 0.18 rifampicin Not assoc w R - Interim
rpoC 767209 c.3840T>C synonymous_variant 0.17 rifampicin Not assoc w R - Interim
rpoC 767212 c.3843G>C synonymous_variant 0.17 rifampicin
rpoC 767221 c.3852C>G synonymous_variant 0.18 rifampicin Not assoc w R - Interim
mmpL5 775639 p.Ile948Val missense_variant 1.0 bedaquiline Not assoc w R - Interim
clofazimine Not assoc w R
rpsL 781395 c.-165T>C upstream_gene_variant 1.0 streptomycin Not assoc w R
rpsL 781700 c.141G>C synonymous_variant 0.18 streptomycin
rpsL 781703 c.144G>T synonymous_variant 0.18 streptomycin
rpsL 781715 c.156T>C synonymous_variant 0.19 streptomycin
rpsL 781728 c.169T>C synonymous_variant 0.19 streptomycin
rpsL 781736 c.177T>C synonymous_variant 0.19 streptomycin
rpsL 781742 c.183C>T synonymous_variant 0.2 streptomycin
rpsL 781748 c.189C>G synonymous_variant 0.2 streptomycin
rpsL 781754 c.195G>C synonymous_variant 0.2 streptomycin
rpsL 781760 c.201T>C synonymous_variant 0.2 streptomycin
rpsL 781772 c.213C>A synonymous_variant 0.2 streptomycin
rpsL 781808 c.249C>T synonymous_variant 0.23 streptomycin
rpsL 781811 c.252C>T synonymous_variant 0.22 streptomycin
rpsL 781832 c.273T>C synonymous_variant 0.22 streptomycin
rpsL 781838 c.279G>C synonymous_variant 0.21 streptomycin
rpsL 781841 c.282C>G synonymous_variant 0.22 streptomycin
rpsL 781865 c.306G>C synonymous_variant 0.2 streptomycin
rpsL 781868 c.309T>C synonymous_variant 0.19 streptomycin
rpsL 781871 c.312G>C synonymous_variant 0.19 streptomycin
rpsL 781877 c.318T>C synonymous_variant 0.2 streptomycin
rpsL 781892 c.333A>G synonymous_variant 0.2 streptomycin
rpsL 781898 c.339A>T synonymous_variant 0.2 streptomycin
rpsL 781916 c.357T>C synonymous_variant 0.21 streptomycin
rpsL 781929 p.Gly124Ser missense_variant 0.24 streptomycin Uncertain significance
rplC 800612 c.-197A>G upstream_gene_variant 0.16 linezolid
rplC 800618 c.-191T>C upstream_gene_variant 0.15 linezolid
rplC 800627 c.-182C>T upstream_gene_variant 0.17 linezolid
rplC 800648 c.-161A>T upstream_gene_variant 0.21 linezolid
rplC 800654 c.-155T>C upstream_gene_variant 0.22 linezolid
rplC 800693 c.-116A>G upstream_gene_variant 0.21 linezolid
rplC 800703 c.-106T>C upstream_gene_variant 0.23 linezolid
rplC 800715 c.-94A>C upstream_gene_variant 0.23 linezolid
rplC 800720 c.-89T>C upstream_gene_variant 0.23 linezolid
rplC 800723 c.-86C>G upstream_gene_variant 0.23 linezolid
rplC 800747 c.-62C>G upstream_gene_variant 0.24 linezolid
rplC 800771 c.-38C>T upstream_gene_variant 0.23 linezolid
rplC 800794 c.-15A>G upstream_gene_variant 0.22 linezolid
rplC 800796 c.-13A>G upstream_gene_variant 0.22 linezolid
rplC 800798 c.-10_-9delGG upstream_gene_variant 0.22 linezolid
rplC 800814 c.6A>G synonymous_variant 0.26 linezolid
rplC 800817 c.9A>T synonymous_variant 0.25 linezolid
rplC 800844 c.36T>C synonymous_variant 0.23 linezolid
rplC 800865 c.57A>G synonymous_variant 0.21 linezolid
rplC 800867 p.Ser20Asn missense_variant 0.2 linezolid
rplC 800874 c.66A>G synonymous_variant 0.19 linezolid
rplC 800875 p.Val23Ile missense_variant 0.18 linezolid
rplC 800880 c.72A>G synonymous_variant 0.18 linezolid
rplC 800889 c.81C>G synonymous_variant 0.19 linezolid
rplC 800892 c.84G>C synonymous_variant 0.19 linezolid
rplC 801367 p.Ala187Thr missense_variant 0.14 linezolid
rplC 801402 c.594T>C synonymous_variant 0.17 linezolid
rplC 801405 c.597T>C synonymous_variant 0.17 linezolid
rplC 801427 p.Met207Val missense_variant 0.16 linezolid
rplC 801438 c.630T>C synonymous_variant 0.17 linezolid
rplC 801442 p.Ile212Val missense_variant 0.18 linezolid
fbiC 1303884 c.954T>G synonymous_variant 0.17 pretomanid
delamanid
clofazimine
fbiC 1303905 c.975G>C synonymous_variant 0.19 pretomanid
delamanid
clofazimine
fbiC 1303920 c.990C>T synonymous_variant 0.16 pretomanid
delamanid
clofazimine
fbiC 1303932 c.1002G>T synonymous_variant 0.16 pretomanid
delamanid
clofazimine
fbiC 1303961 p.Arg344Leu missense_variant 0.15 pretomanid
delamanid
clofazimine
fbiC 1303971 c.1041T>C synonymous_variant 0.16 pretomanid
delamanid
clofazimine
fbiC 1303980 c.1050G>A synonymous_variant 0.17 pretomanid
delamanid
clofazimine
fbiC 1304008 c.1078T>C synonymous_variant 0.17 pretomanid
delamanid
clofazimine
fbiC 1304727 c.1797A>G synonymous_variant 0.16 pretomanid
delamanid
clofazimine
fbiC 1304742 c.1812T>C synonymous_variant 0.19 pretomanid
delamanid
clofazimine
fbiC 1304757 c.1827A>G synonymous_variant 0.2 pretomanid
delamanid
clofazimine
fbiC 1304778 c.1848T>C synonymous_variant 0.22 pretomanid
delamanid
clofazimine
fbiC 1304784 c.1854T>C synonymous_variant 0.22 pretomanid
delamanid
clofazimine
fbiC 1304787 c.1857T>G synonymous_variant 0.22 pretomanid
delamanid
clofazimine
fbiC 1304808 c.1878C>G synonymous_variant 0.2 pretomanid
delamanid
clofazimine
fbiC 1304811 c.1881C>G synonymous_variant 0.2 pretomanid
delamanid
clofazimine
fbiC 1304817 c.1887T>C synonymous_variant 0.21 pretomanid
delamanid
clofazimine
fbiC 1304829 c.1899T>C synonymous_variant 0.21 pretomanid
delamanid
clofazimine
fbiC 1304832 c.1902C>T synonymous_variant 0.2 pretomanid
delamanid Not assoc w R - Interim
clofazimine Not assoc w R - Interim
fbiC 1304856 c.1926C>G synonymous_variant 0.22 pretomanid
delamanid
clofazimine
fbiC 1304862 c.1932G>A synonymous_variant 0.2 pretomanid
delamanid
clofazimine
fbiC 1304869 c.1939C>T synonymous_variant 0.21 pretomanid
delamanid
clofazimine
fbiC 1304875 p.Ile649Val missense_variant 0.2 pretomanid
delamanid
clofazimine
fbiC 1304883 p.Glu651Asp missense_variant 0.21 pretomanid
delamanid
clofazimine
fbiC 1304891 p.Ile654Thr missense_variant 0.21 pretomanid
delamanid
clofazimine
fbiC 1304893 p.Gly655Ser missense_variant 0.21 pretomanid
delamanid
clofazimine
fbiC 1304907 c.1977C>G synonymous_variant 0.22 pretomanid
delamanid
clofazimine
fbiC 1304910 c.1980G>C synonymous_variant 0.22 pretomanid
delamanid
clofazimine
fbiC 1304916 c.1986T>C synonymous_variant 0.23 pretomanid
delamanid
clofazimine
fbiC 1304928 c.1998T>C synonymous_variant 0.22 pretomanid
delamanid
clofazimine
fbiC 1304937 c.2007G>C synonymous_variant 0.21 pretomanid
delamanid
clofazimine
fbiC 1304958 c.2028T>G synonymous_variant 0.2 pretomanid
delamanid
clofazimine
fbiC 1304983 c.2053C>T synonymous_variant 0.16 pretomanid
delamanid
clofazimine
fbiC 1304995 p.Leu689Met missense_variant 0.15 pretomanid
delamanid
clofazimine
sigE 1365072 c.660G>T synonymous_variant 0.94 pyrazinamide Not assoc w R - Interim
rrs 1471659 n.-187C>T upstream_gene_variant 1.0 kanamycin
capreomycin
streptomycin
amikacin
rrl 1473832 n.175C>T non_coding_transcript_exon_variant 0.18 capreomycin Uncertain significance
linezolid
rrl 1473877 n.220G>A non_coding_transcript_exon_variant 0.18 capreomycin
linezolid
rrl 1473898 n.241C>T non_coding_transcript_exon_variant 0.2 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1473945 n.288T>A non_coding_transcript_exon_variant 0.15 capreomycin Uncertain significance
linezolid
rrl 1473946 n.289A>T non_coding_transcript_exon_variant 0.15 capreomycin Uncertain significance
linezolid
rrl 1473986 n.329T>C non_coding_transcript_exon_variant 0.17 capreomycin
linezolid
rrl 1473987 n.330G>A non_coding_transcript_exon_variant 0.17 capreomycin
linezolid
rrl 1473995 n.338G>T non_coding_transcript_exon_variant 0.2 capreomycin
linezolid
rrl 1474001 n.344C>T non_coding_transcript_exon_variant 0.19 capreomycin Not assoc w R
linezolid Not assoc w R
rrl 1474009 n.352A>G non_coding_transcript_exon_variant 0.16 capreomycin
linezolid
rrl 1474012 n.355C>T non_coding_transcript_exon_variant 0.15 capreomycin
linezolid
rrl 1474093 n.436G>T non_coding_transcript_exon_variant 0.17 capreomycin
linezolid
rrl 1474099 n.442G>A non_coding_transcript_exon_variant 0.15 capreomycin
linezolid
rrl 1474103 n.446A>T non_coding_transcript_exon_variant 0.15 capreomycin
linezolid
rrl 1474140 n.483C>T non_coding_transcript_exon_variant 0.18 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474151 n.494C>T non_coding_transcript_exon_variant 0.19 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474181 n.524C>T non_coding_transcript_exon_variant 0.16 capreomycin Uncertain significance
linezolid
rrl 1474362 n.705A>G non_coding_transcript_exon_variant 0.17 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474376 n.719T>C non_coding_transcript_exon_variant 0.18 capreomycin
linezolid
rrl 1474639 n.982G>A non_coding_transcript_exon_variant 0.17 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474794 n.1137C>T non_coding_transcript_exon_variant 0.2 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474812 n.1155G>A non_coding_transcript_exon_variant 0.19 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474823 n.1166C>T non_coding_transcript_exon_variant 0.19 capreomycin
linezolid
rrl 1474831 n.1174A>G non_coding_transcript_exon_variant 0.18 capreomycin Uncertain significance
linezolid
rrl 1474904 n.1247G>A non_coding_transcript_exon_variant 0.21 capreomycin
linezolid
rrl 1474956 n.1299C>T non_coding_transcript_exon_variant 0.19 capreomycin
linezolid
rrl 1474960 n.1303C>G non_coding_transcript_exon_variant 0.18 capreomycin
linezolid
rrl 1474963 n.1306G>T non_coding_transcript_exon_variant 0.18 capreomycin Uncertain significance
linezolid
rrl 1474964 n.1307T>A non_coding_transcript_exon_variant 0.19 capreomycin
linezolid
rrl 1474965 n.1308G>C non_coding_transcript_exon_variant 0.19 capreomycin
linezolid
rrl 1474970 n.1313G>A non_coding_transcript_exon_variant 0.2 capreomycin
linezolid
rrl 1475006 n.1349A>T non_coding_transcript_exon_variant 0.24 capreomycin
linezolid
rrl 1475061 n.1404C>T non_coding_transcript_exon_variant 0.21 capreomycin Uncertain significance
linezolid
rrl 1475088 n.1431A>T non_coding_transcript_exon_variant 0.23 capreomycin
linezolid
rrl 1475199 n.1542G>A non_coding_transcript_exon_variant 0.18 capreomycin
linezolid
rrl 1475206 n.1549C>T non_coding_transcript_exon_variant 0.18 capreomycin Uncertain significance
linezolid
rrl 1475209 n.1552G>C non_coding_transcript_exon_variant 0.18 capreomycin Uncertain significance
linezolid
rrl 1475213 n.1556C>T non_coding_transcript_exon_variant 0.18 capreomycin Uncertain significance
linezolid
rrl 1475249 n.1592T>C non_coding_transcript_exon_variant 0.2 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475252 n.1595C>T non_coding_transcript_exon_variant 0.19 capreomycin
linezolid
rrl 1475266 n.1609T>C non_coding_transcript_exon_variant 0.19 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475267 n.1610G>A non_coding_transcript_exon_variant 0.18 capreomycin
linezolid
rrl 1475275 n.1618C>T non_coding_transcript_exon_variant 0.17 capreomycin
linezolid
rrl 1475276 n.1619T>C non_coding_transcript_exon_variant 0.17 capreomycin
linezolid
rrl 1475291 n.1634A>C non_coding_transcript_exon_variant 0.21 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475313 n.1656G>A non_coding_transcript_exon_variant 0.21 capreomycin
linezolid
rrl 1475315 n.1658A>T non_coding_transcript_exon_variant 0.22 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475355 n.1698C>T non_coding_transcript_exon_variant 0.19 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475369 n.1712G>T non_coding_transcript_exon_variant 0.2 capreomycin
linezolid
rrl 1475402 n.1745C>T non_coding_transcript_exon_variant 0.18 capreomycin
linezolid
rrl 1475419 n.1762C>T non_coding_transcript_exon_variant 0.19 capreomycin Uncertain significance
linezolid
rrl 1475436 n.1779C>T non_coding_transcript_exon_variant 0.18 capreomycin
linezolid
rrl 1475483 n.1826C>T non_coding_transcript_exon_variant 0.2 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475505 n.1848G>A non_coding_transcript_exon_variant 0.2 capreomycin Uncertain significance
linezolid
rrl 1475526 n.1869C>A non_coding_transcript_exon_variant 0.19 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475881 n.2224T>C non_coding_transcript_exon_variant 0.17 capreomycin
linezolid
rrl 1476224 n.2567A>G non_coding_transcript_exon_variant 0.17 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476281 n.2624T>C non_coding_transcript_exon_variant 0.17 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476583 n.2926G>A non_coding_transcript_exon_variant 0.16 capreomycin Uncertain significance
linezolid
rrl 1476584 n.2927C>T non_coding_transcript_exon_variant 0.16 capreomycin Not assoc w R
linezolid Uncertain significance
rrl 1476597 n.2940G>A non_coding_transcript_exon_variant 0.15 capreomycin Uncertain significance
linezolid
rrl 1476603 n.2946G>A non_coding_transcript_exon_variant 0.15 capreomycin Uncertain significance
linezolid Uncertain significance
inhA 1673710 c.-492C>A upstream_gene_variant 0.15 isoniazid
ethionamide
inhA 1673716 c.-486G>A upstream_gene_variant 0.16 isoniazid Uncertain significance
ethionamide
inhA 1673733 c.-469G>C upstream_gene_variant 0.18 isoniazid
ethionamide
inhA 1673748 c.-454A>G upstream_gene_variant 0.18 isoniazid
ethionamide
inhA 1673749 c.-453A>C upstream_gene_variant 0.17 isoniazid
ethionamide
inhA 1673758 c.-444A>G upstream_gene_variant 0.17 isoniazid
ethionamide
inhA 1674537 c.336C>G synonymous_variant 0.21 isoniazid
ethionamide
inhA 1674561 c.360C>T synonymous_variant 0.2 isoniazid
ethionamide
inhA 1674846 p.Ile215Met missense_variant 0.16 isoniazid
ethionamide
inhA 1674864 c.663C>T synonymous_variant 0.17 isoniazid Not assoc w R - Interim
ethionamide Not assoc w R - Interim
inhA 1674870 c.669T>C synonymous_variant 0.17 isoniazid
ethionamide
inhA 1674879 c.678T>C synonymous_variant 0.18 isoniazid
ethionamide
inhA 1674888 c.687C>G synonymous_variant 0.17 isoniazid
ethionamide
inhA 1674903 c.702T>C synonymous_variant 0.16 isoniazid
ethionamide
rpsA 1833589 c.48A>T synonymous_variant 0.17 pyrazinamide
rpsA 1833595 c.54T>C synonymous_variant 0.19 pyrazinamide
rpsA 1833661 c.120A>G synonymous_variant 0.23 pyrazinamide
rpsA 1833667 c.126C>G synonymous_variant 0.22 pyrazinamide
rpsA 1833721 c.180A>G synonymous_variant 0.26 pyrazinamide
rpsA 1833724 c.183C>G synonymous_variant 0.26 pyrazinamide
rpsA 1833727 c.186G>C synonymous_variant 0.27 pyrazinamide
rpsA 1833742 c.201A>G synonymous_variant 0.28 pyrazinamide
rpsA 1833745 c.204G>C synonymous_variant 0.28 pyrazinamide
rpsA 1833748 c.207C>G synonymous_variant 0.28 pyrazinamide
rpsA 1833787 c.246C>G synonymous_variant 0.31 pyrazinamide
rpsA 1833790 c.249T>C synonymous_variant 0.3 pyrazinamide
rpsA 1833802 c.261A>G synonymous_variant 0.31 pyrazinamide
rpsA 1833811 c.270G>T synonymous_variant 0.31 pyrazinamide
rpsA 1833838 c.297G>C synonymous_variant 0.29 pyrazinamide
rpsA 1833841 c.300C>G synonymous_variant 0.29 pyrazinamide
rpsA 1833847 c.306C>G synonymous_variant 0.32 pyrazinamide
rpsA 1833856 c.315A>G synonymous_variant 0.32 pyrazinamide
rpsA 1833874 c.333T>C synonymous_variant 0.29 pyrazinamide
rpsA 1833928 c.387G>C synonymous_variant 0.25 pyrazinamide
rpsA 1833940 c.399C>G synonymous_variant 0.24 pyrazinamide
rpsA 1833971 c.430C>T synonymous_variant 0.22 pyrazinamide
rpsA 1833979 c.438T>C synonymous_variant 0.22 pyrazinamide
rpsA 1834000 c.459G>C synonymous_variant 0.22 pyrazinamide
rpsA 1834021 c.480C>T synonymous_variant 0.23 pyrazinamide
rpsA 1834030 c.489C>G synonymous_variant 0.24 pyrazinamide
rpsA 1834096 c.555G>C synonymous_variant 0.18 pyrazinamide
rpsA 1834099 c.558C>G synonymous_variant 0.17 pyrazinamide
rpsA 1834102 c.561T>C synonymous_variant 0.18 pyrazinamide
rpsA 1834105 c.564C>G synonymous_variant 0.17 pyrazinamide
rpsA 1834108 c.567C>G synonymous_variant 0.17 pyrazinamide
rpsA 1834123 c.582C>G synonymous_variant 0.19 pyrazinamide
rpsA 1834153 c.612T>C synonymous_variant 0.16 pyrazinamide
rpsA 1834154 p.Asn205His missense_variant 0.16 pyrazinamide
rpsA 1834169 p.Thr210Ala missense_variant 0.17 pyrazinamide Uncertain significance
rpsA 1834177 c.636A>C synonymous_variant 0.17 pyrazinamide Not assoc w R - Interim
rpsA 1834189 c.648G>C synonymous_variant 0.21 pyrazinamide
rpsA 1834195 c.654G>C synonymous_variant 0.22 pyrazinamide
rpsA 1834210 c.669C>T synonymous_variant 0.2 pyrazinamide
rpsA 1834222 c.681T>C synonymous_variant 0.18 pyrazinamide
rpsA 1834231 c.690T>C synonymous_variant 0.19 pyrazinamide
rpsA 1834234 c.693G>C synonymous_variant 0.18 pyrazinamide
rpsA 1834249 c.708T>C synonymous_variant 0.22 pyrazinamide
rpsA 1834261 c.720A>G synonymous_variant 0.19 pyrazinamide Not assoc w R - Interim
rpsA 1834262 c.721_723delTCGinsAGC synonymous_variant 0.18 pyrazinamide
rpsA 1834303 c.762T>C synonymous_variant 0.27 pyrazinamide
rpsA 1834306 c.765T>C synonymous_variant 0.27 pyrazinamide
rpsA 1834333 c.792C>T synonymous_variant 0.3 pyrazinamide
rpsA 1834348 c.807T>C synonymous_variant 0.3 pyrazinamide Not assoc w R - Interim
rpsA 1834366 c.825A>G synonymous_variant 0.27 pyrazinamide Not assoc w R - Interim
rpsA 1834396 c.855G>C synonymous_variant 0.29 pyrazinamide
rpsA 1834411 c.870T>C synonymous_variant 0.31 pyrazinamide
rpsA 1834417 c.876G>C synonymous_variant 0.3 pyrazinamide
rpsA 1834423 c.882G>C synonymous_variant 0.3 pyrazinamide
rpsA 1834435 c.894G>C synonymous_variant 0.31 pyrazinamide
rpsA 1834451 c.910T>C synonymous_variant 0.29 pyrazinamide
rpsA 1834465 c.924T>C synonymous_variant 0.32 pyrazinamide
rpsA 1834468 c.927A>G synonymous_variant 0.31 pyrazinamide
rpsA 1834489 c.948T>C synonymous_variant 0.29 pyrazinamide
rpsA 1834513 c.972C>G synonymous_variant 0.29 pyrazinamide
rpsA 1834528 c.987T>C synonymous_variant 0.27 pyrazinamide
rpsA 1834540 c.999G>C synonymous_variant 0.28 pyrazinamide
rpsA 1834546 c.1005T>C synonymous_variant 0.29 pyrazinamide
rpsA 1834555 c.1014T>G synonymous_variant 0.3 pyrazinamide
rpsA 1834606 c.1065C>G synonymous_variant 0.27 pyrazinamide
rpsA 1834609 c.1068T>C synonymous_variant 0.27 pyrazinamide
rpsA 1834633 c.1092A>G synonymous_variant 0.24 pyrazinamide
rpsA 1834639 c.1098T>C synonymous_variant 0.24 pyrazinamide
rpsA 1834654 p.Glu371Asp missense_variant 0.21 pyrazinamide
tsnR 1853361 c.-245T>C upstream_gene_variant 0.19 linezolid
tsnR 1853370 c.-236_-234delGCAinsTCG upstream_gene_variant 0.19 linezolid
tsnR 1853387 c.-219T>G upstream_gene_variant 0.19 linezolid
tsnR 1853394 c.-212_-211delCTinsGC upstream_gene_variant 0.18 linezolid
tsnR 1854300 p.Leu232Pro missense_variant 1.0 linezolid Not assoc w R
tlyA 1917972 c.33A>G synonymous_variant 1.0 capreomycin Not assoc w R
ndh 2101838 p.Ala402Val missense_variant 0.16 isoniazid Uncertain significance
delamanid
ethionamide Uncertain significance
ndh 2101873 p.Phe390Leu missense_variant 0.16 isoniazid
delamanid
ethionamide
ndh 2101885 c.1158G>A synonymous_variant 0.16 isoniazid
delamanid
ethionamide
ndh 2101920 c.1123A>C synonymous_variant 0.17 isoniazid
delamanid
ethionamide
ndh 2101924 c.1119T>G synonymous_variant 0.17 isoniazid
delamanid
ethionamide
ndh 2101939 c.1104A>G synonymous_variant 0.17 isoniazid
delamanid
ethionamide
Rv1979c 2223293 c.-129A>G upstream_gene_variant 1.0 bedaquiline Not assoc w R - Interim
clofazimine Not assoc w R
kasA 2517950 c.-165C>G upstream_gene_variant 0.25 isoniazid
kasA 2517989 c.-126T>C upstream_gene_variant 0.21 isoniazid
kasA 2517993 c.-122G>T upstream_gene_variant 0.22 isoniazid
kasA 2518019 c.-96A>G upstream_gene_variant 0.17 isoniazid
kasA 2518076 c.-39C>T upstream_gene_variant 1.0 isoniazid
kasA 2518624 c.510C>G synonymous_variant 0.18 isoniazid
kasA 2518639 c.525G>C synonymous_variant 0.2 isoniazid
kasA 2518657 c.543G>C synonymous_variant 0.22 isoniazid
kasA 2518672 c.558G>C synonymous_variant 0.27 isoniazid
kasA 2518678 c.564C>T synonymous_variant 0.24 isoniazid
kasA 2518684 c.570C>G synonymous_variant 0.25 isoniazid
kasA 2518693 c.579C>G synonymous_variant 0.24 isoniazid
kasA 2518696 c.582C>G synonymous_variant 0.24 isoniazid
kasA 2518702 c.588C>T synonymous_variant 0.26 isoniazid
kasA 2518705 c.591T>C synonymous_variant 0.26 isoniazid
kasA 2518711 c.597A>G synonymous_variant 0.25 isoniazid
kasA 2518714 c.600A>C synonymous_variant 0.24 isoniazid
kasA 2518732 c.618C>G synonymous_variant 0.23 isoniazid
kasA 2518744 c.630C>T synonymous_variant 0.22 isoniazid
kasA 2518747 c.633C>G synonymous_variant 0.21 isoniazid
kasA 2518768 c.654C>T synonymous_variant 0.23 isoniazid
kasA 2518777 c.663C>T synonymous_variant 0.23 isoniazid
kasA 2518783 c.669T>C synonymous_variant 0.22 isoniazid
kasA 2518789 c.675G>C synonymous_variant 0.21 isoniazid
kasA 2518792 c.678C>A synonymous_variant 0.21 isoniazid
kasA 2518795 c.681C>G synonymous_variant 0.21 isoniazid
kasA 2518819 c.705C>T synonymous_variant 0.22 isoniazid
kasA 2518825 c.711T>C synonymous_variant 0.22 isoniazid
kasA 2518864 c.750G>C synonymous_variant 0.19 isoniazid
kasA 2518910 p.Leu266Met missense_variant 0.15 isoniazid
kasA 2518999 c.885G>A synonymous_variant 0.14 isoniazid
Rv2477c 2782816 c.1227T>G synonymous_variant 0.16 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2782822 c.1221G>C synonymous_variant 0.17 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2782828 c.1215T>C synonymous_variant 0.19 kanamycin
levofloxacin
moxifloxacin Not assoc w R - Interim
streptomycin Not assoc w R - Interim
rifampicin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
amikacin
Rv2477c 2782841 p.Thr401Asn missense_variant 0.22 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2782847 p.Arg399Lys missense_variant 0.21 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2782852 c.1191T>C synonymous_variant 0.21 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2782861 c.1182T>G synonymous_variant 0.22 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2782864 c.1179T>C synonymous_variant 0.22 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2782869 p.Ala392Thr missense_variant 0.23 kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
streptomycin
rifampicin Uncertain significance
ethambutol Uncertain significance
amikacin Uncertain significance
Rv2477c 2782876 c.1167G>C synonymous_variant 0.25 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2782882 c.1161T>C synonymous_variant 0.26 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2782912 p.Ser377Thr missense_variant 0.31 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2782927 p.Thr372Glu missense_variant 0.31 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2782936 c.1107G>T synonymous_variant 0.33 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2782948 c.1095A>G synonymous_variant 0.32 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2782957 c.1086A>G synonymous_variant 0.31 kanamycin Not assoc w R - Interim
levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
streptomycin Not assoc w R - Interim
rifampicin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
amikacin Not assoc w R - Interim
Rv2477c 2782966 c.1077C>A synonymous_variant 0.29 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2782969 c.1074A>C synonymous_variant 0.29 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2782972 c.1071G>C synonymous_variant 0.29 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2782981 c.1062G>C synonymous_variant 0.29 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2782984 c.1059T>C synonymous_variant 0.29 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2782990 c.1053C>G synonymous_variant 0.3 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783002 c.1041T>C synonymous_variant 0.29 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783008 c.1035C>G synonymous_variant 0.3 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783013 c.1030T>C synonymous_variant 0.28 kanamycin Not assoc w R - Interim
levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
streptomycin Not assoc w R - Interim
rifampicin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
amikacin Not assoc w R - Interim
Rv2477c 2783015 p.Ser343Thr missense_variant 0.3 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783035 c.1008G>C synonymous_variant 0.32 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783040 p.Ala335Thr missense_variant 0.34 kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
streptomycin Uncertain significance
rifampicin Uncertain significance
ethambutol Uncertain significance
amikacin Uncertain significance
Rv2477c 2783044 c.999G>C synonymous_variant 0.34 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783048 p.Asp332Gly missense_variant 0.32 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783059 c.984T>C synonymous_variant 0.31 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783068 p.Asp325Glu missense_variant 0.3 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783077 c.966T>C synonymous_variant 0.31 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783092 c.951A>G synonymous_variant 0.24 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
amikacin
Rv2477c 2783095 c.948C>G synonymous_variant 0.24 kanamycin Not assoc w R - Interim
levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
streptomycin Not assoc w R - Interim
rifampicin Not assoc w R
ethambutol Not assoc w R - Interim
amikacin Not assoc w R - Interim
Rv2477c 2783098 c.945C>G synonymous_variant 0.24 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783101 c.942G>T synonymous_variant 0.24 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783116 c.927T>C synonymous_variant 0.23 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783140 c.903C>G synonymous_variant 0.25 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783149 c.894G>C synonymous_variant 0.26 kanamycin Not assoc w R - Interim
levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
streptomycin
rifampicin Not assoc w R - Interim
ethambutol
amikacin Not assoc w R - Interim
Rv2477c 2783158 c.885A>C synonymous_variant 0.26 kanamycin Not assoc w R - Interim
levofloxacin Not assoc w R - Interim
moxifloxacin
streptomycin
rifampicin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
amikacin Not assoc w R - Interim
Rv2477c 2783179 c.864G>C synonymous_variant 0.25 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783182 c.861C>G synonymous_variant 0.24 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783185 c.858G>A synonymous_variant 0.24 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783194 c.849A>G synonymous_variant 0.25 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783221 c.822G>C synonymous_variant 0.22 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783224 c.819C>G synonymous_variant 0.22 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783230 c.813T>G synonymous_variant 0.22 kanamycin
levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
streptomycin Not assoc w R - Interim
rifampicin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
amikacin
Rv2477c 2783235 c.808T>C synonymous_variant 0.2 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783254 c.789A>G synonymous_variant 0.21 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783263 c.780G>C synonymous_variant 0.22 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783275 c.768C>G synonymous_variant 0.19 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783278 c.765A>G synonymous_variant 0.19 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783293 c.750G>A synonymous_variant 0.2 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783299 c.744A>G synonymous_variant 0.19 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783302 c.741A>G synonymous_variant 0.19 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783317 c.726G>C synonymous_variant 0.18 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783350 c.693T>C synonymous_variant 0.19 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783353 c.690T>C synonymous_variant 0.18 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783359 c.684G>A synonymous_variant 0.18 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783374 c.669G>C synonymous_variant 0.18 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783395 c.648T>G synonymous_variant 0.16 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783401 c.642C>T synonymous_variant 0.15 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783512 c.531A>G synonymous_variant 0.16 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783521 c.522G>C synonymous_variant 0.17 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783527 c.516A>G synonymous_variant 0.19 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783539 c.504G>C synonymous_variant 0.18 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783542 c.501G>C synonymous_variant 0.21 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783548 c.495T>C synonymous_variant 0.21 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783554 c.489C>T synonymous_variant 0.21 kanamycin Not assoc w R - Interim
levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
streptomycin
rifampicin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
amikacin Not assoc w R - Interim
Rv2477c 2783557 c.486T>C synonymous_variant 0.22 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783563 c.480A>G synonymous_variant 0.25 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783572 c.471A>G synonymous_variant 0.26 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783586 p.Ala153Pro missense_variant 0.25 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783593 c.450T>C synonymous_variant 0.26 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783605 c.438T>C synonymous_variant 0.27 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783620 c.423C>G synonymous_variant 0.3 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783628 p.Ala139Ser missense_variant 0.29 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783656 c.387G>C synonymous_variant 0.3 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783665 c.378A>G synonymous_variant 0.32 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783674 c.369T>C synonymous_variant 0.33 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783683 c.360A>G synonymous_variant 0.32 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783700 p.Thr115Ser missense_variant 0.31 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783718 c.325T>C synonymous_variant 0.32 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783719 c.324A>G synonymous_variant 0.32 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783751 p.Ile98Val missense_variant 0.3 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783758 p.Asp95Glu missense_variant 0.29 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783761 c.282G>C synonymous_variant 0.27 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783766 p.Met93Leu missense_variant 0.26 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783776 c.267G>C synonymous_variant 0.24 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783779 c.264T>C synonymous_variant 0.23 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783797 p.Asp82Glu missense_variant 0.21 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783815 c.228A>G synonymous_variant 0.21 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783821 p.Gln74Leu missense_variant 0.19 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783833 c.210G>C synonymous_variant 0.21 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783839 c.204C>G synonymous_variant 0.21 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783843 p.Gly67Asp missense_variant 0.22 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783846 p.Thr66Asn missense_variant 0.22 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783860 c.183T>C synonymous_variant 0.22 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783863 c.180C>T synonymous_variant 0.21 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783932 c.111C>T synonymous_variant 0.15 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2680 2996085 c.-20G>A upstream_gene_variant 0.49 capreomycin Uncertain significance
Rv2752c 3065040 c.1152C>G synonymous_variant 0.18 levofloxacin
moxifloxacin
isoniazid Not assoc w R - Interim
rifampicin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
Rv2752c 3065196 c.996T>C synonymous_variant 0.15 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3065202 c.990T>G synonymous_variant 0.16 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3065205 c.987T>C synonymous_variant 0.16 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3065223 c.969T>C synonymous_variant 0.16 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3065232 c.960T>C synonymous_variant 0.15 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3065241 c.951A>G synonymous_variant 0.15 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
Rv2752c 3066810 c.-619G>A upstream_gene_variant 0.14 levofloxacin
moxifloxacin
isoniazid
rifampicin
ethambutol
thyX 3067325 c.621A>G synonymous_variant 0.17 para-aminosalicylic_acid
thyX 3067349 c.597G>C synonymous_variant 0.21 para-aminosalicylic_acid
thyX 3067355 c.591A>C synonymous_variant 0.21 para-aminosalicylic_acid
thyX 3067367 c.579G>C synonymous_variant 0.26 para-aminosalicylic_acid
thyX 3067373 c.573C>G synonymous_variant 0.26 para-aminosalicylic_acid
thyX 3067391 c.555G>C synonymous_variant 0.25 para-aminosalicylic_acid
thyX 3067394 c.552G>C synonymous_variant 0.26 para-aminosalicylic_acid
thyX 3067439 c.507A>G synonymous_variant 0.26 para-aminosalicylic_acid
thyX 3067445 c.501C>G synonymous_variant 0.26 para-aminosalicylic_acid
thyX 3067457 c.489C>G synonymous_variant 0.27 para-aminosalicylic_acid
thyX 3067465 p.Ile161Val missense_variant 0.27 para-aminosalicylic_acid
thyX 3067475 c.471A>G synonymous_variant 0.23 para-aminosalicylic_acid
thyX 3067490 c.456C>G synonymous_variant 0.23 para-aminosalicylic_acid
thyX 3067493 c.453A>G synonymous_variant 0.23 para-aminosalicylic_acid
thyX 3067515 p.Ser144Thr missense_variant 0.25 para-aminosalicylic_acid
thyX 3067530 p.Ala139Ser missense_variant 0.26 para-aminosalicylic_acid
thyX 3067545 p.Glu134Ala missense_variant 0.25 para-aminosalicylic_acid
thyX 3067549 p.Thr133Ala missense_variant 0.24 para-aminosalicylic_acid
thyX 3067556 p.His130Gln missense_variant 0.26 para-aminosalicylic_acid
thyX 3067559 c.387C>G synonymous_variant 0.26 para-aminosalicylic_acid
thyX 3067565 p.Asp127Glu missense_variant 0.26 para-aminosalicylic_acid
thyX 3067570 p.Ala126Pro missense_variant 0.26 para-aminosalicylic_acid
thyX 3067577 c.369G>A synonymous_variant 0.29 para-aminosalicylic_acid
thyX 3067601 p.Arg115His missense_variant 0.26 para-aminosalicylic_acid
thyX 3067611 p.Lys112Thr missense_variant 0.25 para-aminosalicylic_acid
thyX 3067619 c.327A>C synonymous_variant 0.23 para-aminosalicylic_acid
thyX 3067631 c.315C>G synonymous_variant 0.24 para-aminosalicylic_acid
thyX 3067634 c.312C>G synonymous_variant 0.24 para-aminosalicylic_acid
thyX 3067652 c.294T>C synonymous_variant 0.24 para-aminosalicylic_acid
thyX 3067661 c.285C>G synonymous_variant 0.22 para-aminosalicylic_acid
thyX 3067685 c.261A>C synonymous_variant 0.19 para-aminosalicylic_acid
thyX 3067691 p.Ile85Leu missense_variant 0.18 para-aminosalicylic_acid
thyX 3067694 c.252G>C synonymous_variant 0.18 para-aminosalicylic_acid
thyA 3073872 p.Ile200Met missense_variant 0.16 para-aminosalicylic_acid
thyA 3073892 c.580T>C synonymous_variant 0.17 para-aminosalicylic_acid
thyA 3073898 p.Ala192Ser missense_variant 0.17 para-aminosalicylic_acid
thyA 3073917 c.555C>G synonymous_variant 0.16 para-aminosalicylic_acid
thyA 3073920 c.552C>G synonymous_variant 0.17 para-aminosalicylic_acid
thyA 3073977 c.495A>G synonymous_variant 0.19 para-aminosalicylic_acid
thyA 3073989 c.483T>C synonymous_variant 0.18 para-aminosalicylic_acid
thyA 3074004 c.468T>C synonymous_variant 0.2 para-aminosalicylic_acid
thyA 3074010 c.462C>G synonymous_variant 0.21 para-aminosalicylic_acid
thyA 3074028 c.444G>C synonymous_variant 0.2 para-aminosalicylic_acid
thyA 3074031 c.441T>C synonymous_variant 0.19 para-aminosalicylic_acid
thyA 3074034 c.438T>C synonymous_variant 0.19 para-aminosalicylic_acid
thyA 3074037 c.435C>G synonymous_variant 0.19 para-aminosalicylic_acid
thyA 3074053 p.Arg140Gln missense_variant 0.19 para-aminosalicylic_acid
thyA 3074055 p.Glu139Pro missense_variant 0.18 para-aminosalicylic_acid
thyA 3074061 c.411A>G synonymous_variant 0.18 para-aminosalicylic_acid
thyA 3074079 c.393G>C synonymous_variant 0.17 para-aminosalicylic_acid
thyA 3074097 c.375C>A synonymous_variant 0.16 para-aminosalicylic_acid
thyA 3074102 p.Asp124Asn missense_variant 0.16 para-aminosalicylic_acid
thyA 3074106 c.366T>C synonymous_variant 0.16 para-aminosalicylic_acid
thyA 3074127 c.345G>C synonymous_variant 0.16 para-aminosalicylic_acid
ald 3086788 c.-32T>C upstream_gene_variant 1.0 cycloserine
mtrB 3625065 p.Met517Leu missense_variant 1.0 rifampicin Not assoc w R
bedaquiline Uncertain significance
mtrB 3625636 c.978C>G synonymous_variant 0.18 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3625656 c.958T>C synonymous_variant 0.24 rifampicin Not assoc w R - Interim
bedaquiline Not assoc w R - Interim
lpqB 3625663 c.-753G>C upstream_gene_variant 0.25 rifampicin
bedaquiline
lpqB 3625669 c.-759G>C upstream_gene_variant 0.26 rifampicin
bedaquiline
lpqB 3625687 c.-777G>C upstream_gene_variant 0.3 rifampicin
bedaquiline
lpqB 3625690 c.-780T>C upstream_gene_variant 0.31 rifampicin
bedaquiline
lpqB 3625696 c.-786A>G upstream_gene_variant 0.32 rifampicin
bedaquiline
mtrB 3625705 c.909C>G synonymous_variant 0.33 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3625711 c.903C>T synonymous_variant 0.34 rifampicin Not assoc w R - Interim
bedaquiline
lpqB 3625714 c.-804C>T upstream_gene_variant 0.34 rifampicin
bedaquiline
mtrB 3625720 c.894G>C synonymous_variant 0.33 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3625729 c.885A>G synonymous_variant 0.31 rifampicin Not assoc w R - Interim
bedaquiline
lpqB 3625735 c.-825C>T upstream_gene_variant 0.31 rifampicin
bedaquiline
lpqB 3625749 c.-839C>T upstream_gene_variant 0.27 rifampicin
bedaquiline
mtrB 3625750 c.864G>A synonymous_variant 0.27 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3625755 p.Ala287Thr missense_variant 0.27 rifampicin Uncertain significance
bedaquiline
mtrB 3625765 c.849C>G synonymous_variant 0.26 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3625774 c.840G>A synonymous_variant 0.26 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3625797 p.Val273Met missense_variant 0.27 rifampicin Uncertain significance
bedaquiline Uncertain significance
mtrB 3625806 c.808A>C synonymous_variant 0.25 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3625807 c.807C>G synonymous_variant 0.25 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3625837 c.777C>G synonymous_variant 0.22 rifampicin Not assoc w R - Interim
bedaquiline
lpqB 3625849 c.-939T>C upstream_gene_variant 0.21 rifampicin
bedaquiline
mtrB 3625852 c.762A>G synonymous_variant 0.19 rifampicin Not assoc w R - Interim
bedaquiline
lpqB 3625864 c.-954T>G upstream_gene_variant 0.2 rifampicin
bedaquiline
mtrB 3625876 c.738G>C synonymous_variant 0.19 rifampicin Not assoc w R - Interim
bedaquiline
lpqB 3625909 c.-999T>G upstream_gene_variant 0.16 rifampicin
bedaquiline
mtrA 3626774 p.Arg192Ser missense_variant 0.16 rifampicin
bedaquiline
mtrB 3626783 c.-170C>G upstream_gene_variant 0.16 rifampicin
bedaquiline
mtrA 3626786 c.564A>G synonymous_variant 0.17 rifampicin Not assoc w R - Interim
bedaquiline
mtrA 3626792 c.558G>T synonymous_variant 0.17 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3626795 c.-182C>T upstream_gene_variant 0.17 rifampicin
bedaquiline
mtrB 3626798 c.-185T>C upstream_gene_variant 0.18 rifampicin
bedaquiline
mtrA 3626804 c.546A>G synonymous_variant 0.19 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3626840 c.-227C>G upstream_gene_variant 0.23 rifampicin
bedaquiline
mtrA 3626846 c.504G>A synonymous_variant 0.24 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3626858 c.-245A>G upstream_gene_variant 0.23 rifampicin
bedaquiline
mtrB 3626861 c.-248C>G upstream_gene_variant 0.22 rifampicin
bedaquiline
mtrB 3626866 c.-253T>C upstream_gene_variant 0.22 rifampicin
bedaquiline
mtrB 3626876 c.-263A>G upstream_gene_variant 0.24 rifampicin
bedaquiline
mtrB 3626885 c.-272A>C upstream_gene_variant 0.25 rifampicin
bedaquiline
mtrB 3626890 c.-277T>C upstream_gene_variant 0.22 rifampicin
bedaquiline
mtrB 3626900 c.-287G>A upstream_gene_variant 0.22 rifampicin
bedaquiline
mtrB 3626903 c.-290T>C upstream_gene_variant 0.23 rifampicin
bedaquiline
mtrB 3626912 c.-299T>G upstream_gene_variant 0.25 rifampicin
bedaquiline
mtrB 3626927 c.-314G>C upstream_gene_variant 0.23 rifampicin
bedaquiline
mtrB 3626930 c.-317A>G upstream_gene_variant 0.24 rifampicin
bedaquiline
mtrA 3626939 c.411A>G synonymous_variant 0.22 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3626942 c.-329A>C upstream_gene_variant 0.22 rifampicin
bedaquiline
mtrB 3626945 c.-332C>T upstream_gene_variant 0.22 rifampicin
bedaquiline
mtrB 3626957 c.-344G>C upstream_gene_variant 0.23 rifampicin
bedaquiline
mtrB 3626972 c.-359A>G upstream_gene_variant 0.24 rifampicin
bedaquiline
mtrB 3626987 c.-374C>G upstream_gene_variant 0.22 rifampicin
bedaquiline
mtrB 3627008 c.-395G>C upstream_gene_variant 0.23 rifampicin
bedaquiline
mtrB 3627011 c.-398T>G upstream_gene_variant 0.24 rifampicin
bedaquiline
mtrB 3627065 c.-452G>C upstream_gene_variant 0.2 rifampicin
bedaquiline
mtrA 3627068 c.282T>C synonymous_variant 0.2 rifampicin Not assoc w R - Interim
bedaquiline
mtrA 3627071 c.279G>T synonymous_variant 0.2 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3627074 c.-461G>C upstream_gene_variant 0.2 rifampicin
bedaquiline
mtrA 3627080 c.270T>C synonymous_variant 0.19 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3627083 c.-470G>C upstream_gene_variant 0.19 rifampicin
bedaquiline
mtrA 3627098 c.252A>C synonymous_variant 0.21 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3627104 c.-491C>G upstream_gene_variant 0.2 rifampicin
bedaquiline
mtrA 3627119 c.231T>G synonymous_variant 0.2 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3627122 c.-509T>C upstream_gene_variant 0.2 rifampicin
bedaquiline
mtrB 3627167 c.-554T>C upstream_gene_variant 0.21 rifampicin
bedaquiline
mtrB 3627181 c.-568T>C upstream_gene_variant 0.21 rifampicin
bedaquiline
mtrB 3627182 c.-569T>C upstream_gene_variant 0.21 rifampicin
bedaquiline
mtrA 3627188 c.162A>G synonymous_variant 0.23 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3627209 c.-596G>A upstream_gene_variant 0.23 rifampicin
bedaquiline
mtrA 3627221 c.129C>T synonymous_variant 0.2 rifampicin Not assoc w R - Interim
bedaquiline
mtrA 3627227 c.123T>C synonymous_variant 0.19 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3627233 c.-620T>C upstream_gene_variant 0.17 rifampicin
bedaquiline
mtrB 3627236 c.-623T>C upstream_gene_variant 0.17 rifampicin
bedaquiline
mtrA 3627242 c.108C>T synonymous_variant 0.18 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3627254 c.-641C>T upstream_gene_variant 0.18 rifampicin
bedaquiline
mtrB 3627263 c.-650C>T upstream_gene_variant 0.16 rifampicin
bedaquiline
mtrB 3627272 c.-659G>T upstream_gene_variant 0.16 rifampicin
bedaquiline
mtrB 3627275 c.-662G>T upstream_gene_variant 0.15 rifampicin
bedaquiline
rpoA 3877587 c.921A>G synonymous_variant 0.18 rifampicin Not assoc w R - Interim
rpoA 3877613 p.Ile299Val missense_variant 0.21 rifampicin
rpoA 3877617 c.891G>C synonymous_variant 0.21 rifampicin
rpoA 3877656 c.852T>G synonymous_variant 0.25 rifampicin Not assoc w R - Interim
rpoA 3877668 c.840A>G synonymous_variant 0.25 rifampicin
rpoA 3877679 p.Ala277Ser missense_variant 0.28 rifampicin
rpoA 3877686 c.822A>G synonymous_variant 0.28 rifampicin Not assoc w R - Interim
rpoA 3877692 c.816G>C synonymous_variant 0.29 rifampicin Not assoc w R - Interim
rpoA 3877704 c.804G>C synonymous_variant 0.28 rifampicin
rpoA 3877737 c.771G>C synonymous_variant 0.25 rifampicin
rpoA 3877743 c.765T>C synonymous_variant 0.26 rifampicin Not assoc w R - Interim
rpoA 3877764 c.744C>G synonymous_variant 0.23 rifampicin Not assoc w R - Interim
rpoA 3877770 c.738A>G synonymous_variant 0.23 rifampicin Not assoc w R - Interim
rpoA 3877776 c.732T>C synonymous_variant 0.25 rifampicin Not assoc w R - Interim
rpoA 3877782 c.726T>C synonymous_variant 0.26 rifampicin Not assoc w R - Interim
rpoA 3877791 c.717C>G synonymous_variant 0.26 rifampicin
rpoA 3877818 c.690A>G synonymous_variant 0.29 rifampicin Not assoc w R - Interim
rpoA 3877839 c.669G>C synonymous_variant 0.29 rifampicin Not assoc w R - Interim
rpoA 3877848 c.660C>T synonymous_variant 0.29 rifampicin Not assoc w R - Interim
rpoA 3877857 c.651G>A synonymous_variant 0.28 rifampicin
rpoA 3877866 c.642G>C synonymous_variant 0.28 rifampicin
rpoA 3877875 c.633T>G synonymous_variant 0.28 rifampicin
rpoA 3877878 c.630G>C synonymous_variant 0.27 rifampicin
rpoA 3877890 c.618C>T synonymous_variant 0.3 rifampicin
rpoA 3877896 c.612G>C synonymous_variant 0.28 rifampicin
rpoA 3877900 p.Ser203Asn missense_variant 0.3 rifampicin
rpoA 3877905 c.603A>G synonymous_variant 0.29 rifampicin Not assoc w R - Interim
rpoA 3877908 p.Asn200Ser missense_variant 0.29 rifampicin
rpoA 3877920 c.588G>C synonymous_variant 0.28 rifampicin Not assoc w R - Interim
rpoA 3877923 c.585C>T synonymous_variant 0.28 rifampicin Not assoc w R - Interim
rpoA 3877926 c.582G>C synonymous_variant 0.28 rifampicin
rpoA 3877962 c.546G>T synonymous_variant 0.3 rifampicin Not assoc w R - Interim
rpoA 3877986 c.522G>C synonymous_variant 0.28 rifampicin
rpoA 3877989 c.519A>G synonymous_variant 0.28 rifampicin Not assoc w R - Interim
rpoA 3878001 c.507A>G synonymous_variant 0.29 rifampicin Not assoc w R - Interim
rpoA 3878022 c.486T>C synonymous_variant 0.28 rifampicin
rpoA 3878028 c.480G>C synonymous_variant 0.26 rifampicin
rpoA 3878031 c.477T>C synonymous_variant 0.26 rifampicin
rpoA 3878040 c.468T>C synonymous_variant 0.27 rifampicin Not assoc w R - Interim
rpoA 3878055 c.453A>G synonymous_variant 0.29 rifampicin
rpoA 3878058 c.450G>T synonymous_variant 0.27 rifampicin
rpoA 3878061 c.447G>C synonymous_variant 0.26 rifampicin
rpoA 3878067 c.441C>G synonymous_variant 0.26 rifampicin
rpoA 3878070 c.438T>C synonymous_variant 0.26 rifampicin
rpoA 3878076 c.432C>T synonymous_variant 0.27 rifampicin
rpoA 3878094 c.414C>G synonymous_variant 0.28 rifampicin
rpoA 3878103 c.405A>G synonymous_variant 0.27 rifampicin
rpoA 3878106 c.402G>C synonymous_variant 0.28 rifampicin
rpoA 3878118 c.390T>C synonymous_variant 0.28 rifampicin
rpoA 3878130 c.378C>G synonymous_variant 0.29 rifampicin
rpoA 3878141 p.Met123Leu missense_variant 0.25 rifampicin Uncertain significance
rpoA 3878143 p.Gly122Asp missense_variant 0.25 rifampicin Uncertain significance
rpoA 3878157 c.351C>G synonymous_variant 0.26 rifampicin
rpoA 3878163 c.345C>T synonymous_variant 0.27 rifampicin Not assoc w R - Interim
rpoA 3878169 c.339G>C synonymous_variant 0.26 rifampicin Not assoc w R - Interim
rpoA 3878172 c.336G>C synonymous_variant 0.25 rifampicin
rpoA 3878187 c.321C>G synonymous_variant 0.28 rifampicin
rpoA 3878193 c.315T>C synonymous_variant 0.3 rifampicin Not assoc w R - Interim
rpoA 3878199 c.309T>C synonymous_variant 0.3 rifampicin
rpoA 3878217 c.291A>G synonymous_variant 0.29 rifampicin Not assoc w R - Interim
rpoA 3878226 c.282C>G synonymous_variant 0.28 rifampicin
rpoA 3878232 c.276G>C synonymous_variant 0.3 rifampicin
rpoA 3878247 c.261G>C synonymous_variant 0.33 rifampicin
rpoA 3878250 c.258C>G synonymous_variant 0.33 rifampicin
rpoA 3878271 c.237T>C synonymous_variant 0.31 rifampicin Not assoc w R - Interim
rpoA 3878284 p.Glu75Ala missense_variant 0.31 rifampicin
rpoA 3878292 c.216T>C synonymous_variant 0.3 rifampicin Not assoc w R - Interim
rpoA 3878298 c.210A>G synonymous_variant 0.32 rifampicin Not assoc w R - Interim
rpoA 3878304 c.204G>C synonymous_variant 0.31 rifampicin
rpoA 3878310 c.198G>C synonymous_variant 0.3 rifampicin
rpoA 3878313 c.195G>C synonymous_variant 0.31 rifampicin Not assoc w R - Interim
rpoA 3878322 c.186A>G synonymous_variant 0.3 rifampicin Not assoc w R - Interim
rpoA 3878331 c.177A>G synonymous_variant 0.29 rifampicin Not assoc w R - Interim
rpoA 3878334 c.174T>C synonymous_variant 0.29 rifampicin Not assoc w R - Interim
rpoA 3878337 c.171T>C synonymous_variant 0.3 rifampicin Not assoc w R - Interim
rpoA 3878346 c.162T>C synonymous_variant 0.33 rifampicin
rpoA 3878364 c.144A>C synonymous_variant 0.27 rifampicin
rpoA 3878367 c.141C>G synonymous_variant 0.27 rifampicin
rpoA 3878376 c.132G>C synonymous_variant 0.27 rifampicin
rpoA 3878385 c.123C>G synonymous_variant 0.25 rifampicin
rpoA 3878388 c.120C>G synonymous_variant 0.24 rifampicin
rpoA 3878391 c.117T>C synonymous_variant 0.25 rifampicin
rpoA 3878415 c.93C>T synonymous_variant 0.26 rifampicin
rpoA 3878424 c.84G>C synonymous_variant 0.27 rifampicin
rpoA 3878436 c.72A>G synonymous_variant 0.23 rifampicin
rpoA 3878442 c.66G>C synonymous_variant 0.23 rifampicin
rpoA 3878454 c.54A>C synonymous_variant 0.22 rifampicin
rpoA 3878472 p.Asp12Glu missense_variant 0.21 rifampicin
rpoA 3878478 c.30C>G synonymous_variant 0.23 rifampicin
rpoA 3878484 c.24C>A synonymous_variant 0.2 rifampicin
rpoA 3878490 c.18C>A synonymous_variant 0.19 rifampicin
rpoA 3878496 c.12A>T synonymous_variant 0.19 rifampicin
rpoA 3878683 c.-176G>C upstream_gene_variant 0.22 rifampicin
rpoA 3878698 c.-191A>G upstream_gene_variant 0.24 rifampicin
rpoA 3878713 c.-206G>A upstream_gene_variant 0.2 rifampicin Uncertain significance
rpoA 3878716 c.-209C>G upstream_gene_variant 0.23 rifampicin
rpoA 3878725 c.-218A>G upstream_gene_variant 0.24 rifampicin
rpoA 3878736 c.-229A>G upstream_gene_variant 0.22 rifampicin
rpoA 3878737 c.-230G>C upstream_gene_variant 0.22 rifampicin
rpoA 3878742 c.-235G>A upstream_gene_variant 0.22 rifampicin
rpoA 3878746 c.-239A>G upstream_gene_variant 0.22 rifampicin Uncertain significance
rpoA 3878749 c.-242G>T upstream_gene_variant 0.23 rifampicin
rpoA 3878761 c.-254G>C upstream_gene_variant 0.25 rifampicin
rpoA 3878764 c.-257A>G upstream_gene_variant 0.25 rifampicin
rpoA 3878785 c.-278T>G upstream_gene_variant 0.25 rifampicin
rpoA 3878788 c.-281G>C upstream_gene_variant 0.25 rifampicin Uncertain significance
rpoA 3878806 c.-299C>G upstream_gene_variant 0.28 rifampicin
rpoA 3878809 c.-302T>C upstream_gene_variant 0.31 rifampicin
rpoA 3878818 c.-311G>A upstream_gene_variant 0.26 rifampicin
rpoA 3878824 c.-317G>C upstream_gene_variant 0.24 rifampicin
rpoA 3878833 c.-326C>G upstream_gene_variant 0.23 rifampicin
rpoA 3878836 c.-331_-329delAAGinsTCC upstream_gene_variant 0.22 rifampicin
rpoA 3878853 c.-346G>A upstream_gene_variant 0.23 rifampicin
rpoA 3878878 c.-371T>C upstream_gene_variant 0.25 rifampicin Uncertain significance
rpoA 3878890 c.-383C>G upstream_gene_variant 0.28 rifampicin
rpoA 3878896 c.-389G>C upstream_gene_variant 0.26 rifampicin
rpoA 3878909 c.-402A>G upstream_gene_variant 0.26 rifampicin
rpoA 3878914 c.-407T>C upstream_gene_variant 0.26 rifampicin Uncertain significance
rpoA 3878917 c.-410G>A upstream_gene_variant 0.26 rifampicin Uncertain significance
rpoA 3878932 c.-425G>A upstream_gene_variant 0.22 rifampicin
rpoA 3878938 c.-431T>C upstream_gene_variant 0.24 rifampicin
rpoA 3878947 c.-440G>C upstream_gene_variant 0.21 rifampicin Uncertain significance
rpoA 3878968 c.-461T>C upstream_gene_variant 0.21 rifampicin Uncertain significance
rpoA 3878976 c.-469A>G upstream_gene_variant 0.22 rifampicin Uncertain significance
rpoA 3878986 c.-479G>C upstream_gene_variant 0.22 rifampicin
rpoA 3878998 c.-491C>G upstream_gene_variant 0.24 rifampicin Uncertain significance
rpoA 3879005 c.-499_-498delAAinsCG upstream_gene_variant 0.22 rifampicin
rpoA 3879013 c.-506A>G upstream_gene_variant 0.21 rifampicin
rpoA 3879079 c.-572A>G upstream_gene_variant 0.18 rifampicin
rpoA 3879088 c.-581A>C upstream_gene_variant 0.18 rifampicin
clpC1 4038356 c.2349T>C synonymous_variant 0.2 pyrazinamide
clpC1 4038359 c.2346A>G synonymous_variant 0.21 pyrazinamide
clpC1 4038368 c.2337T>C synonymous_variant 0.23 pyrazinamide
clpC1 4038388 c.2317T>C synonymous_variant 0.21 pyrazinamide
clpC1 4038392 c.2313C>T synonymous_variant 0.21 pyrazinamide
clpC1 4038398 c.2307G>T synonymous_variant 0.22 pyrazinamide
clpC1 4038403 c.2302T>C synonymous_variant 0.22 pyrazinamide Not assoc w R - Interim
clpC1 4038407 c.2298G>C synonymous_variant 0.23 pyrazinamide
clpC1 4038419 c.2286T>C synonymous_variant 0.2 pyrazinamide
clpC1 4038433 c.2272C>T synonymous_variant 0.19 pyrazinamide
clpC1 4038434 c.2271G>A synonymous_variant 0.2 pyrazinamide
clpC1 4038444 p.Ala754Lys missense_variant 0.19 pyrazinamide
clpC1 4038446 c.2259T>C synonymous_variant 0.19 pyrazinamide
clpC1 4038456 p.Val750Glu missense_variant 0.21 pyrazinamide
clpC1 4038460 p.Leu749Met missense_variant 0.21 pyrazinamide
clpC1 4038486 p.Gly740Asn missense_variant 0.2 pyrazinamide
clpC1 4038489 p.Ala739Gly missense_variant 0.2 pyrazinamide
clpC1 4038494 c.2211G>C synonymous_variant 0.2 pyrazinamide
clpC1 4038497 p.Ser736Gln missense_variant 0.2 pyrazinamide
clpC1 4038530 p.Glu725Asp missense_variant 0.2 pyrazinamide
clpC1 4038596 c.2109A>G synonymous_variant 0.22 pyrazinamide
clpC1 4038623 c.2082A>G synonymous_variant 0.19 pyrazinamide
clpC1 4038640 p.Asp689Asn missense_variant 0.21 pyrazinamide
clpC1 4038653 c.2052C>T synonymous_variant 0.19 pyrazinamide
clpC1 4038658 p.Lys683Gln missense_variant 0.18 pyrazinamide
clpC1 4038661 p.Ser682Thr missense_variant 0.17 pyrazinamide
clpC1 4038662 c.2043T>C synonymous_variant 0.17 pyrazinamide
clpC1 4038671 c.2034T>C synonymous_variant 0.18 pyrazinamide
clpC1 4038683 c.2022T>C synonymous_variant 0.18 pyrazinamide Not assoc w R - Interim
clpC1 4038695 c.2010C>G synonymous_variant 0.18 pyrazinamide
clpC1 4038704 c.2001T>C synonymous_variant 0.16 pyrazinamide
clpC1 4038713 c.1992T>C synonymous_variant 0.17 pyrazinamide
clpC1 4038749 c.1956C>G synonymous_variant 0.22 pyrazinamide
clpC1 4038755 c.1950G>T synonymous_variant 0.22 pyrazinamide
clpC1 4038770 c.1935C>T synonymous_variant 0.22 pyrazinamide
clpC1 4038773 c.1932T>C synonymous_variant 0.23 pyrazinamide
clpC1 4038782 c.1923G>C synonymous_variant 0.21 pyrazinamide
clpC1 4038812 c.1893T>C synonymous_variant 0.22 pyrazinamide
clpC1 4038821 c.1884G>A synonymous_variant 0.19 pyrazinamide
clpC1 4038845 c.1860G>C synonymous_variant 0.26 pyrazinamide
clpC1 4038860 c.1845G>C synonymous_variant 0.3 pyrazinamide Not assoc w R - Interim
clpC1 4038878 c.1827A>G synonymous_variant 0.31 pyrazinamide Not assoc w R - Interim
clpC1 4038908 c.1797C>G synonymous_variant 0.36 pyrazinamide
clpC1 4038914 c.1791G>C synonymous_variant 0.37 pyrazinamide
clpC1 4038923 c.1780_1782delCTAinsTTG synonymous_variant 0.35 pyrazinamide
clpC1 4038953 c.1752A>G synonymous_variant 0.35 pyrazinamide
clpC1 4038956 c.1749T>C synonymous_variant 0.36 pyrazinamide
clpC1 4038965 c.1740T>C synonymous_variant 0.32 pyrazinamide
clpC1 4038971 c.1734T>C synonymous_variant 0.3 pyrazinamide
clpC1 4038974 c.1731T>C synonymous_variant 0.3 pyrazinamide Not assoc w R - Interim
clpC1 4038989 c.1716T>C synonymous_variant 0.33 pyrazinamide
clpC1 4038997 c.1708T>C synonymous_variant 0.31 pyrazinamide Not assoc w R - Interim
clpC1 4039004 c.1701C>G synonymous_variant 0.34 pyrazinamide
clpC1 4039022 c.1683A>G synonymous_variant 0.33 pyrazinamide
clpC1 4039064 c.1641C>T synonymous_variant 0.34 pyrazinamide
clpC1 4039097 c.1608G>C synonymous_variant 0.31 pyrazinamide
clpC1 4039103 c.1602T>C synonymous_variant 0.3 pyrazinamide
clpC1 4039106 c.1599G>C synonymous_variant 0.28 pyrazinamide
clpC1 4039112 c.1593C>G synonymous_variant 0.28 pyrazinamide
clpC1 4039121 c.1584T>C synonymous_variant 0.28 pyrazinamide
clpC1 4039142 c.1563A>G synonymous_variant 0.29 pyrazinamide
clpC1 4039145 c.1560G>C synonymous_variant 0.29 pyrazinamide
clpC1 4039169 p.Glu512Asp missense_variant 0.28 pyrazinamide
clpC1 4039172 c.1533A>G synonymous_variant 0.28 pyrazinamide
clpC1 4039178 c.1527G>C synonymous_variant 0.28 pyrazinamide
clpC1 4039183 c.1522T>C synonymous_variant 0.28 pyrazinamide
clpC1 4039186 c.1519C>T synonymous_variant 0.29 pyrazinamide
clpC1 4039226 c.1479T>C synonymous_variant 0.25 pyrazinamide Not assoc w R - Interim
clpC1 4039274 c.1431G>C synonymous_variant 0.21 pyrazinamide Not assoc w R - Interim
clpC1 4039286 c.1419T>C synonymous_variant 0.23 pyrazinamide
clpC1 4039295 c.1410A>C synonymous_variant 0.23 pyrazinamide
clpC1 4039298 c.1407T>C synonymous_variant 0.23 pyrazinamide
clpC1 4039319 c.1386T>C synonymous_variant 0.21 pyrazinamide Not assoc w R - Interim
clpC1 4039322 c.1383T>C synonymous_variant 0.21 pyrazinamide
clpC1 4039328 c.1377A>C synonymous_variant 0.21 pyrazinamide
clpC1 4039331 c.1374C>G synonymous_variant 0.21 pyrazinamide
clpC1 4039337 p.Thr456Gln missense_variant 0.22 pyrazinamide
clpC1 4039349 c.1356C>T synonymous_variant 0.22 pyrazinamide
clpC1 4039352 c.1353C>G synonymous_variant 0.24 pyrazinamide
clpC1 4039364 c.1341C>G synonymous_variant 0.24 pyrazinamide
clpC1 4039391 c.1314T>G synonymous_variant 0.21 pyrazinamide
clpC1 4039409 c.1296T>C synonymous_variant 0.22 pyrazinamide
clpC1 4039412 c.1293T>G synonymous_variant 0.2 pyrazinamide
clpC1 4039415 p.Glu430Asp missense_variant 0.19 pyrazinamide Uncertain significance
clpC1 4039430 c.1275T>C synonymous_variant 0.21 pyrazinamide
clpC1 4039442 c.1263A>G synonymous_variant 0.21 pyrazinamide
clpC1 4039454 c.1251A>G synonymous_variant 0.22 pyrazinamide Not assoc w R - Interim
clpC1 4039463 c.1242C>G synonymous_variant 0.24 pyrazinamide
clpC1 4039466 c.1239T>C synonymous_variant 0.24 pyrazinamide
clpC1 4039469 c.1236T>C synonymous_variant 0.24 pyrazinamide
clpC1 4039480 c.1225C>A synonymous_variant 0.24 pyrazinamide
clpC1 4039481 c.1224T>G synonymous_variant 0.24 pyrazinamide Not assoc w R - Interim
clpC1 4039484 c.1221T>C synonymous_variant 0.24 pyrazinamide
clpC1 4039517 c.1188C>G synonymous_variant 0.24 pyrazinamide
clpC1 4039556 c.1149G>C synonymous_variant 0.22 pyrazinamide
clpC1 4039559 c.1146C>G synonymous_variant 0.22 pyrazinamide
clpC1 4039562 c.1143C>G synonymous_variant 0.22 pyrazinamide
clpC1 4039565 c.1140G>C synonymous_variant 0.22 pyrazinamide
clpC1 4039570 p.Met379Leu missense_variant 0.22 pyrazinamide Uncertain significance
clpC1 4039576 p.Ala377Pro missense_variant 0.22 pyrazinamide
clpC1 4039577 c.1128T>C synonymous_variant 0.22 pyrazinamide Not assoc w R - Interim
clpC1 4039589 c.1116G>C synonymous_variant 0.23 pyrazinamide
clpC1 4039610 c.1095G>C synonymous_variant 0.22 pyrazinamide
clpC1 4039616 c.1089G>C synonymous_variant 0.22 pyrazinamide
clpC1 4039622 c.1083C>T synonymous_variant 0.22 pyrazinamide
clpC1 4039661 c.1044T>G synonymous_variant 0.25 pyrazinamide
clpC1 4039664 c.1041G>C synonymous_variant 0.25 pyrazinamide
clpC1 4039694 c.1011G>C synonymous_variant 0.24 pyrazinamide
clpC1 4039724 c.981A>G synonymous_variant 0.21 pyrazinamide
clpC1 4039751 c.954A>G synonymous_variant 0.17 pyrazinamide
clpC1 4039760 c.945T>C synonymous_variant 0.17 pyrazinamide
clpC1 4039766 c.939T>C synonymous_variant 0.17 pyrazinamide
clpC1 4039769 c.936C>G synonymous_variant 0.17 pyrazinamide
clpC1 4039775 c.930G>C synonymous_variant 0.17 pyrazinamide
clpC1 4039781 c.924G>C synonymous_variant 0.17 pyrazinamide
clpC1 4039790 c.915C>G synonymous_variant 0.18 pyrazinamide
clpC1 4039805 c.900C>T synonymous_variant 0.19 pyrazinamide Not assoc w R - Interim
clpC1 4039817 c.888A>C synonymous_variant 0.2 pyrazinamide Not assoc w R - Interim
clpC1 4039820 c.885T>G synonymous_variant 0.2 pyrazinamide
clpC1 4039826 c.879C>G synonymous_variant 0.22 pyrazinamide
clpC1 4039831 c.874T>C synonymous_variant 0.22 pyrazinamide
clpC1 4039850 c.855T>C synonymous_variant 0.19 pyrazinamide
clpC1 4039865 c.840T>C synonymous_variant 0.18 pyrazinamide
clpC1 4039898 c.807C>G synonymous_variant 0.21 pyrazinamide
clpC1 4039928 c.775_777delAGCinsTCG synonymous_variant 0.19 pyrazinamide
clpC1 4039931 c.774T>C synonymous_variant 0.18 pyrazinamide
clpC1 4039937 c.768G>C synonymous_variant 0.18 pyrazinamide
clpC1 4039946 c.759A>C synonymous_variant 0.18 pyrazinamide
clpC1 4039951 c.754C>T synonymous_variant 0.2 pyrazinamide
clpC1 4039952 c.753T>C synonymous_variant 0.2 pyrazinamide
clpC1 4039979 c.726C>G synonymous_variant 0.22 pyrazinamide
clpC1 4039988 c.717C>G synonymous_variant 0.22 pyrazinamide
clpC1 4039991 c.714G>C synonymous_variant 0.22 pyrazinamide
clpC1 4040021 c.684A>C synonymous_variant 0.22 pyrazinamide Not assoc w R - Interim
clpC1 4040024 c.681A>G synonymous_variant 0.21 pyrazinamide
clpC1 4040033 c.672G>C synonymous_variant 0.2 pyrazinamide
clpC1 4040036 c.669C>G synonymous_variant 0.2 pyrazinamide
clpC1 4040090 p.Ser205Thr missense_variant 0.16 pyrazinamide
clpC1 4040093 c.612C>G synonymous_variant 0.16 pyrazinamide Not assoc w R - Interim
clpC1 4040105 c.600C>G synonymous_variant 0.2 pyrazinamide
clpC1 4040147 c.558A>G synonymous_variant 0.27 pyrazinamide Not assoc w R - Interim
clpC1 4040162 c.543G>C synonymous_variant 0.23 pyrazinamide Not assoc w R - Interim
clpC1 4040165 c.540G>C synonymous_variant 0.23 pyrazinamide
clpC1 4040171 c.534C>G synonymous_variant 0.25 pyrazinamide
clpC1 4040201 c.504C>G synonymous_variant 0.24 pyrazinamide
clpC1 4040204 c.501G>C synonymous_variant 0.22 pyrazinamide
clpC1 4040207 c.498T>G synonymous_variant 0.23 pyrazinamide
clpC1 4040210 c.495G>C synonymous_variant 0.23 pyrazinamide
clpC1 4040213 c.490_492delTCTinsAGC synonymous_variant 0.23 pyrazinamide
clpC1 4040225 c.480A>C synonymous_variant 0.22 pyrazinamide
clpC1 4040228 c.477G>T synonymous_variant 0.23 pyrazinamide
clpC1 4040231 c.474C>T synonymous_variant 0.23 pyrazinamide
clpC1 4040237 c.468C>T synonymous_variant 0.27 pyrazinamide
clpC1 4040246 c.459C>G synonymous_variant 0.27 pyrazinamide
clpC1 4040249 c.456A>G synonymous_variant 0.27 pyrazinamide
clpC1 4040267 c.438A>G synonymous_variant 0.27 pyrazinamide Not assoc w R - Interim
clpC1 4040273 c.432T>C synonymous_variant 0.28 pyrazinamide Not assoc w R - Interim
clpC1 4040277 c.427_428delTCinsAG synonymous_variant 0.25 pyrazinamide
clpC1 4040279 c.426C>G synonymous_variant 0.25 pyrazinamide Not assoc w R - Interim
clpC1 4040291 c.414G>C synonymous_variant 0.28 pyrazinamide
clpC1 4040318 c.387C>G synonymous_variant 0.22 pyrazinamide
clpC1 4040330 c.375C>G synonymous_variant 0.21 pyrazinamide
clpC1 4040342 c.363C>G synonymous_variant 0.23 pyrazinamide
clpC1 4040354 c.351A>G synonymous_variant 0.23 pyrazinamide
clpC1 4040363 c.342A>T synonymous_variant 0.2 pyrazinamide
clpC1 4040369 c.336C>G synonymous_variant 0.19 pyrazinamide
clpC1 4040381 c.324T>C synonymous_variant 0.17 pyrazinamide
clpC1 4040393 c.312G>C synonymous_variant 0.17 pyrazinamide Not assoc w R - Interim
clpC1 4040411 c.294T>C synonymous_variant 0.16 pyrazinamide Not assoc w R - Interim
clpC1 4040471 c.234T>C synonymous_variant 0.17 pyrazinamide Not assoc w R - Interim
clpC1 4040522 c.183T>C synonymous_variant 0.17 pyrazinamide Not assoc w R - Interim
clpC1 4040528 c.177G>C synonymous_variant 0.16 pyrazinamide
panD 4044725 c.-444C>T upstream_gene_variant 0.18 pyrazinamide
panD 4044737 c.-456T>C upstream_gene_variant 0.19 pyrazinamide
panD 4044746 c.-467_-465delGTGinsATC upstream_gene_variant 0.19 pyrazinamide
panD 4044752 c.-471T>C upstream_gene_variant 0.2 pyrazinamide
panD 4044758 c.-477C>T upstream_gene_variant 0.19 pyrazinamide
panD 4044779 c.-500_-498delCTAinsTGC upstream_gene_variant 0.22 pyrazinamide
panD 4044788 c.-507G>C upstream_gene_variant 0.23 pyrazinamide
panD 4044791 c.-510G>C upstream_gene_variant 0.24 pyrazinamide
panD 4044800 c.-519C>G upstream_gene_variant 0.24 pyrazinamide
panD 4044812 c.-531A>C upstream_gene_variant 0.24 pyrazinamide
panD 4044818 c.-538_-537delCGinsAC upstream_gene_variant 0.24 pyrazinamide
panD 4044823 c.-542G>C upstream_gene_variant 0.24 pyrazinamide
panD 4044844 c.-563T>C upstream_gene_variant 0.21 pyrazinamide
panD 4044848 c.-567T>G upstream_gene_variant 0.22 pyrazinamide
panD 4044854 c.-573A>G upstream_gene_variant 0.2 pyrazinamide
panD 4044860 c.-579C>G upstream_gene_variant 0.2 pyrazinamide
panD 4044869 c.-588G>A upstream_gene_variant 0.18 pyrazinamide
panD 4044872 c.-591C>G upstream_gene_variant 0.19 pyrazinamide
panD 4044890 c.-609G>C upstream_gene_variant 0.2 pyrazinamide
panD 4044895 c.-614A>G upstream_gene_variant 0.19 pyrazinamide
panD 4044896 c.-615T>G upstream_gene_variant 0.19 pyrazinamide
panD 4044902 c.-623_-621delACGinsGCC upstream_gene_variant 0.19 pyrazinamide
panD 4044908 c.-628_-627delCTinsTC upstream_gene_variant 0.19 pyrazinamide
panD 4044917 c.-636G>C upstream_gene_variant 0.19 pyrazinamide
panD 4044926 c.-645C>A upstream_gene_variant 0.19 pyrazinamide
panD 4044929 c.-648G>C upstream_gene_variant 0.19 pyrazinamide
panD 4044935 c.-655_-654delAAinsTG upstream_gene_variant 0.19 pyrazinamide
panD 4044941 c.-660G>C upstream_gene_variant 0.2 pyrazinamide
panD 4044954 c.-674_-673delCCinsAT upstream_gene_variant 0.2 pyrazinamide
panD 4044959 c.-678C>G upstream_gene_variant 0.19 pyrazinamide
panD 4044980 c.-699A>G upstream_gene_variant 0.18 pyrazinamide
panD 4044983 c.-702G>T upstream_gene_variant 0.18 pyrazinamide
panD 4044989 c.-708T>C upstream_gene_variant 0.17 pyrazinamide
panD 4045000 c.-719A>C upstream_gene_variant 0.17 pyrazinamide
panD 4045001 c.-720G>C upstream_gene_variant 0.17 pyrazinamide
panD 4045028 c.-747C>G upstream_gene_variant 0.16 pyrazinamide
glpK 4139432 c.324C>T synonymous_variant 0.17 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4139453 c.303T>C synonymous_variant 0.16 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4139489 c.267G>T synonymous_variant 0.14 levofloxacin Not assoc w R - Interim
moxifloxacin
isoniazid Not assoc w R - Interim
streptomycin Not assoc w R - Interim
rifampicin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
glpK 4139525 c.231C>T synonymous_variant 0.14 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4139531 c.225C>A synonymous_variant 0.15 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4139554 p.Ala68Ser missense_variant 0.15 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
embC 4239298 c.-565C>T upstream_gene_variant 1.0 ethambutol Not assoc w R
embC 4240726 c.864G>C synonymous_variant 0.2 ethambutol Not assoc w R - Interim
embC 4241449 c.1587C>G synonymous_variant 0.18 ethambutol
embC 4241453 p.Ile531Val missense_variant 0.19 ethambutol
embC 4241479 c.1617C>G synonymous_variant 0.18 ethambutol
embC 4241480 c.1618T>C synonymous_variant 0.18 ethambutol
embC 4241496 p.Ala545Gly missense_variant 0.2 ethambutol
embC 4241500 c.1638A>C synonymous_variant 0.19 ethambutol
embC 4241501 p.Ser547Thr missense_variant 0.2 ethambutol
embC 4241506 c.1644G>C synonymous_variant 0.2 ethambutol
embC 4241518 c.1656A>G synonymous_variant 0.21 ethambutol
embC 4241521 c.1659T>C synonymous_variant 0.21 ethambutol Not assoc w R - Interim
embC 4241530 c.1668C>A synonymous_variant 0.23 ethambutol
embC 4241536 c.1674A>G synonymous_variant 0.2 ethambutol
embC 4241539 c.1677T>C synonymous_variant 0.2 ethambutol Not assoc w R - Interim
embC 4241545 c.1683T>C synonymous_variant 0.2 ethambutol
embC 4241548 c.1686T>C synonymous_variant 0.2 ethambutol
embC 4241551 c.1689A>G synonymous_variant 0.2 ethambutol
embC 4241567 p.Ile569Val missense_variant 0.22 ethambutol
embC 4241572 c.1710C>G synonymous_variant 0.22 ethambutol
embC 4241578 c.1716G>C synonymous_variant 0.21 ethambutol
embC 4241584 c.1722T>C synonymous_variant 0.21 ethambutol
embC 4241587 c.1725C>G synonymous_variant 0.21 ethambutol
embC 4241591 p.Leu577Val missense_variant 0.21 ethambutol
embC 4241611 c.1749G>C synonymous_variant 0.21 ethambutol
embC 4241614 c.1752A>C synonymous_variant 0.21 ethambutol
embC 4241626 c.1764T>C synonymous_variant 0.17 ethambutol
embC 4241635 c.1773G>C synonymous_variant 0.18 ethambutol
embC 4241650 p.Leu596Phe missense_variant 0.16 ethambutol
embC 4241657 p.Ser599Pro missense_variant 0.18 ethambutol
embC 4241665 c.1803G>C synonymous_variant 0.16 ethambutol
embC 4242643 c.2781C>T synonymous_variant 0.99 ethambutol Not assoc w R
embC 4242803 p.Val981Leu missense_variant 0.96 ethambutol Not assoc w R
embA 4245198 p.Leu656Ile missense_variant 0.18 ethambutol
embA 4245207 c.1975T>C synonymous_variant 0.19 ethambutol
embA 4245222 p.Tyr664Gln missense_variant 0.19 ethambutol
embA 4245248 c.2016G>C synonymous_variant 0.22 ethambutol
embA 4245257 c.2025A>G synonymous_variant 0.24 ethambutol
embA 4245263 c.2031A>G synonymous_variant 0.22 ethambutol Not assoc w R - Interim
embA 4245282 p.Ile684Val missense_variant 0.19 ethambutol
embA 4245285 c.2053T>C synonymous_variant 0.19 ethambutol
embA 4245290 c.2058C>G synonymous_variant 0.19 ethambutol
embA 4245293 c.2061T>G synonymous_variant 0.19 ethambutol
embA 4245296 c.2064G>C synonymous_variant 0.2 ethambutol
embA 4245299 c.2067A>G synonymous_variant 0.19 ethambutol
embA 4245315 p.Val695Thr missense_variant 0.17 ethambutol
embB 4247611 c.1098G>T synonymous_variant 0.15 ethambutol Not assoc w R - Interim
embB 4247629 c.1116C>G synonymous_variant 0.18 ethambutol
embB 4247632 c.1119C>G synonymous_variant 0.17 ethambutol
embB 4247638 c.1125G>C synonymous_variant 0.17 ethambutol
embB 4247646 p.Glu378Ala missense_variant 0.17 ethambutol Not assoc w R
embB 4247683 c.1170C>G synonymous_variant 0.17 ethambutol
embB 4247761 c.1248T>C synonymous_variant 0.18 ethambutol
embB 4247773 c.1260G>A synonymous_variant 0.18 ethambutol
embB 4247776 c.1263G>T synonymous_variant 0.18 ethambutol
embB 4247800 c.1287A>T synonymous_variant 0.15 ethambutol
embB 4247819 p.Val436Ile missense_variant 0.15 ethambutol Uncertain significance
embB 4247830 c.1317A>C synonymous_variant 0.17 ethambutol
embB 4247836 c.1323A>G synonymous_variant 0.17 ethambutol Not assoc w R - Interim
embB 4247839 c.1326G>C synonymous_variant 0.17 ethambutol Not assoc w R - Interim
embB 4247866 c.1353G>C synonymous_variant 0.2 ethambutol
embB 4247875 c.1362G>C synonymous_variant 0.22 ethambutol
embB 4247876 c.1363C>T synonymous_variant 0.22 ethambutol
embB 4247881 c.1368G>C synonymous_variant 0.22 ethambutol
embB 4247887 c.1374C>T synonymous_variant 0.23 ethambutol Not assoc w R - Interim
embB 4247893 c.1380C>T synonymous_variant 0.24 ethambutol
embB 4247899 p.Met462Ile missense_variant 0.24 ethambutol
embB 4247905 c.1392G>C synonymous_variant 0.23 ethambutol Not assoc w R - Interim
embB 4247909 c.1396T>C synonymous_variant 0.25 ethambutol
embB 4247914 c.1401G>C synonymous_variant 0.25 ethambutol Not assoc w R - Interim
embB 4247926 c.1413C>T synonymous_variant 0.25 ethambutol
embB 4247932 c.1419C>G synonymous_variant 0.26 ethambutol
embB 4247940 p.Leu476Trp missense_variant 0.25 ethambutol
embB 4247945 c.1432T>C synonymous_variant 0.25 ethambutol
embB 4247951 p.Ser480Ala missense_variant 0.24 ethambutol
embB 4247956 c.1443G>C synonymous_variant 0.23 ethambutol Not assoc w R - Interim
embB 4247974 c.1461C>G synonymous_variant 0.22 ethambutol
embB 4248007 c.1494C>G synonymous_variant 0.22 ethambutol
embB 4248011 p.Ser500Arg missense_variant 0.21 ethambutol
embB 4248014 p.Thr501Ala missense_variant 0.21 ethambutol Uncertain significance
embB 4248035 p.Val508Ile missense_variant 0.22 ethambutol
embB 4248040 c.1527C>G synonymous_variant 0.22 ethambutol
embB 4248041 p.Ala510Thr missense_variant 0.22 ethambutol Uncertain significance
embB 4248044 p.Lys511Ala missense_variant 0.22 ethambutol
embB 4248070 c.1557T>C synonymous_variant 0.24 ethambutol
embB 4248085 c.1572T>C synonymous_variant 0.21 ethambutol
embB 4248097 c.1584C>G synonymous_variant 0.23 ethambutol
embB 4248130 c.1617G>C synonymous_variant 0.22 ethambutol
embB 4248133 c.1620C>G synonymous_variant 0.22 ethambutol
embB 4248139 c.1626C>G synonymous_variant 0.22 ethambutol
embB 4248142 c.1629T>C synonymous_variant 0.22 ethambutol
embB 4248143 c.1630T>C synonymous_variant 0.22 ethambutol
embB 4248157 c.1644A>G synonymous_variant 0.24 ethambutol Not assoc w R - Interim
embB 4248199 c.1686A>G synonymous_variant 0.19 ethambutol
embB 4248200 p.Ile563Val missense_variant 0.19 ethambutol
embB 4248205 c.1692C>G synonymous_variant 0.19 ethambutol
embB 4248206 p.Ser565Gly missense_variant 0.19 ethambutol Uncertain significance
embB 4248220 c.1707A>C synonymous_variant 0.21 ethambutol
embB 4248304 c.1791G>C synonymous_variant 0.17 ethambutol
embB 4249411 c.2898G>A synonymous_variant 0.18 ethambutol
embB 4249417 c.2904A>G synonymous_variant 0.18 ethambutol
embB 4249424 p.Leu971Met missense_variant 0.16 ethambutol
embB 4249429 c.2916C>T synonymous_variant 0.17 ethambutol
embB 4249432 c.2919A>G synonymous_variant 0.17 ethambutol
embB 4249441 c.2928A>G synonymous_variant 0.18 ethambutol Not assoc w R - Interim
embB 4249444 c.2931T>C synonymous_variant 0.19 ethambutol
embB 4249447 c.2934G>C synonymous_variant 0.2 ethambutol
embB 4249469 p.Leu986Met missense_variant 0.2 ethambutol
embB 4249486 c.2973T>G synonymous_variant 0.21 ethambutol
embB 4249498 c.2985G>C synonymous_variant 0.24 ethambutol
embB 4249521 p.Ala1003Val missense_variant 0.23 ethambutol
embB 4249525 c.3012T>C synonymous_variant 0.23 ethambutol Not assoc w R - Interim
embB 4249529 p.Ile1006Val missense_variant 0.23 ethambutol
embB 4249532 p.Ala1007Thr missense_variant 0.23 ethambutol Uncertain significance
embB 4249537 c.3024A>G synonymous_variant 0.23 ethambutol
embB 4249543 c.3030G>C synonymous_variant 0.23 ethambutol
embB 4249546 c.3033G>A synonymous_variant 0.23 ethambutol
embB 4249558 c.3045A>C synonymous_variant 0.22 ethambutol
embB 4249568 p.Ser1019Thr missense_variant 0.21 ethambutol
embB 4249573 c.3060T>C synonymous_variant 0.2 ethambutol
embB 4249579 c.3066G>A synonymous_variant 0.18 ethambutol
embB 4249580 p.Leu1023Met missense_variant 0.18 ethambutol
embB 4249594 c.3081G>C synonymous_variant 0.17 ethambutol
embB 4249606 c.3093C>A synonymous_variant 0.16 ethambutol
aftB 4269201 c.-365A>G upstream_gene_variant 0.18 ethambutol
aftB 4269206 c.-370C>T upstream_gene_variant 0.18 ethambutol
ubiA 4269220 p.Ala205Lys missense_variant 0.16 ethambutol
ubiA 4269222 c.612T>C synonymous_variant 0.17 ethambutol Not assoc w R - Interim
aftB 4269242 c.-406C>T upstream_gene_variant 0.17 ethambutol
ubiA 4269243 p.His197Gln missense_variant 0.17 ethambutol
aftB 4269249 c.-413G>A upstream_gene_variant 0.18 ethambutol
aftB 4269258 c.-422C>T upstream_gene_variant 0.18 ethambutol
ubiA 4269312 c.522G>A synonymous_variant 0.16 ethambutol Not assoc w R - Interim
ubiA 4269329 p.Lys169Glu missense_variant 0.18 ethambutol
aftB 4269342 c.-506G>C upstream_gene_variant 0.2 ethambutol
ubiA 4269380 p.Val152Ile missense_variant 0.22 ethambutol
ubiA 4269387 p.Glu149Asp missense_variant 0.2 ethambutol Not assoc w R
ubiA 4269390 p.Val148Leu missense_variant 0.19 ethambutol
aftB 4269402 c.-566T>C upstream_gene_variant 0.19 ethambutol
aftB 4269405 c.-569G>A upstream_gene_variant 0.18 ethambutol
aftB 4269411 c.-575T>G upstream_gene_variant 0.17 ethambutol
aftB 4269414 c.-578T>C upstream_gene_variant 0.18 ethambutol
aftB 4269420 c.-584T>C upstream_gene_variant 0.18 ethambutol
aftB 4269428 c.-592T>C upstream_gene_variant 0.18 ethambutol
ubiA 4269436 p.Ala133Gly missense_variant 0.17 ethambutol
whiB6 4338595 c.-75delG upstream_gene_variant 1.0 kanamycin Not assoc w R
capreomycin Not assoc w R
amikacin Not assoc w R
whiB6 4338732 c.-211C>T upstream_gene_variant 1.0 kanamycin
capreomycin
amikacin