Run ID: ERR9786627
Sample name:
Date: 2024-10-05T00:45:44.716234
Number of reads: 2764976
Percentage reads mapped: 83.78
Median coverage: 120.0
Strain: lineage4.1.2.1
Spoligotype:
Drug-resistance: Other
Lineage | Family | RDs | Frequency |
---|---|---|---|
lineage4.1 | Euro-American | None | 0.96 |
lineage4.1.2 | Euro-American | None | 0.99 |
lineage4.1.2.1 | Euro-American (Haarlem) | RD182 | 0.99 |
lineage4 | Euro-American | None | 0.97 |
Drug | Resistance | Supporting mutations | WHO confidence | Comment |
---|---|---|---|---|
rifampicin | ||||
isoniazid | ||||
ethambutol | embB | p.Ala388Gly | Mutation from literature | |
pyrazinamide | ||||
streptomycin | ||||
fluoroquinolones | ||||
moxifloxacin | ||||
ofloxacin | ||||
levofloxacin | ||||
ciprofloxacin | ||||
aminoglycosides | ||||
amikacin | ||||
capreomycin | ||||
kanamycin | ||||
cycloserine | ||||
ethionamide | ||||
clofazimine | ||||
para-aminosalicylic_acid | ||||
delamanid | ||||
bedaquiline | ||||
linezolid |
Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs | Confidence | Comment |
---|---|---|---|---|---|---|---|
embB | 4247676 | p.Ala388Gly | missense_variant | 0.16 | ethambutol | Mutation from literature |
Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs | Confidence |
---|---|---|---|---|---|---|
gyrA | 6403 | c.-899T>C | upstream_gene_variant | 0.16 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 6931 | c.1692A>G | synonymous_variant | 0.16 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrB | 6952 | c.1713C>G | synonymous_variant | 0.17 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7007 | c.-295C>T | upstream_gene_variant | 0.17 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7010 | c.-292C>T | upstream_gene_variant | 0.17 | levofloxacin | |
moxifloxacin | ||||||
gyrB | 7023 | p.Leu595Gln | missense_variant | 0.14 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7362 | p.Glu21Gln | missense_variant | 1.0 | levofloxacin | Not assoc w R |
moxifloxacin | Not assoc w R | |||||
gyrA | 7541 | c.240C>G | synonymous_variant | 0.16 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7547 | c.246C>T | synonymous_variant | 0.17 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7562 | c.261C>T | synonymous_variant | 0.16 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7571 | c.270G>C | synonymous_variant | 0.17 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7585 | p.Ser95Thr | missense_variant | 1.0 | levofloxacin | Not assoc w R |
moxifloxacin | Not assoc w R | |||||
gyrA | 7595 | c.294C>G | synonymous_variant | 0.19 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7601 | c.300C>G | synonymous_variant | 0.19 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7607 | c.306C>A | synonymous_variant | 0.18 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7622 | c.321C>T | synonymous_variant | 0.2 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7625 | c.324G>C | synonymous_variant | 0.2 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7631 | c.330G>C | synonymous_variant | 0.19 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7637 | c.336C>G | synonymous_variant | 0.21 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7652 | c.351C>T | synonymous_variant | 0.22 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7658 | c.357A>G | synonymous_variant | 0.22 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7664 | c.363T>C | synonymous_variant | 0.22 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7673 | c.372G>A | synonymous_variant | 0.21 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7683 | c.382_384delAGGinsCGC | synonymous_variant | 0.21 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7694 | c.393A>G | synonymous_variant | 0.2 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7697 | c.396C>G | synonymous_variant | 0.2 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7710 | c.409_411delTTGinsCTC | synonymous_variant | 0.18 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7715 | c.414G>C | synonymous_variant | 0.17 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7721 | c.420G>A | synonymous_variant | 0.17 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7725 | c.424C>T | synonymous_variant | 0.17 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | ||||||
gyrA | 7728 | c.427_429delAGGinsCGC | synonymous_variant | 0.17 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7739 | c.438C>T | synonymous_variant | 0.18 | levofloxacin | |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7763 | c.462T>C | synonymous_variant | 0.19 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7772 | c.471C>T | synonymous_variant | 0.18 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | ||||||
gyrA | 8767 | p.Arg489Lys | missense_variant | 0.15 | levofloxacin | Uncertain significance |
moxifloxacin | Uncertain significance | |||||
gyrA | 8870 | c.1569G>C | synonymous_variant | 0.17 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8897 | c.1596T>C | synonymous_variant | 0.16 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8903 | c.1602T>C | synonymous_variant | 0.17 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9182 | c.1881T>C | synonymous_variant | 0.17 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9191 | c.1890G>C | synonymous_variant | 0.16 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9204 | p.Ser635Thr | missense_variant | 0.16 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9304 | p.Gly668Asp | missense_variant | 1.0 | levofloxacin | Not assoc w R |
moxifloxacin | Not assoc w R | |||||
fgd1 | 490984 | p.Leu68Met | missense_variant | 0.14 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 491007 | c.225G>C | synonymous_variant | 0.18 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 491043 | c.261T>G | synonymous_variant | 0.17 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 491202 | c.420G>C | synonymous_variant | 0.16 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 491217 | c.435T>C | synonymous_variant | 0.16 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 491232 | c.450T>C | synonymous_variant | 0.16 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fgd1 | 491591 | p.Lys270Met | missense_variant | 0.94 | pretomanid | |
delamanid | Uncertain significance | |||||
clofazimine | Not assoc w R | |||||
mshA | 575665 | c.318G>A | synonymous_variant | 0.15 | isoniazid | |
ethionamide | ||||||
mshA | 575674 | c.327G>C | synonymous_variant | 0.17 | isoniazid | |
ethionamide | ||||||
mshA | 575679 | p.Asn111Ser | missense_variant | 0.84 | isoniazid | Not assoc w R |
ethionamide | Not assoc w R | |||||
mshA | 575695 | c.348C>G | synonymous_variant | 0.16 | isoniazid | Not assoc w R - Interim |
ethionamide | ||||||
mshA | 575701 | c.354G>A | synonymous_variant | 0.16 | isoniazid | |
ethionamide | ||||||
mshA | 575713 | c.366G>A | synonymous_variant | 0.16 | isoniazid | |
ethionamide | ||||||
mshA | 575719 | c.372C>T | synonymous_variant | 0.17 | isoniazid | Not assoc w R - Interim |
ethionamide | Not assoc w R - Interim | |||||
mshA | 575734 | c.387T>G | synonymous_variant | 0.18 | isoniazid | |
ethionamide | ||||||
mshA | 575737 | c.390T>C | synonymous_variant | 0.19 | isoniazid | |
ethionamide | ||||||
mshA | 575755 | c.408G>A | synonymous_variant | 0.16 | isoniazid | |
ethionamide | ||||||
mshA | 575756 | c.409C>T | synonymous_variant | 0.16 | isoniazid | |
ethionamide | ||||||
mshA | 575770 | c.423G>A | synonymous_variant | 0.16 | isoniazid | |
ethionamide | ||||||
mshA | 575771 | p.Val142Ser | missense_variant | 0.16 | isoniazid | |
ethionamide | ||||||
ccsA | 620340 | c.450C>G | synonymous_variant | 0.16 | kanamycin | |
capreomycin | ||||||
amikacin | ||||||
ccsA | 620346 | c.456C>G | synonymous_variant | 0.17 | kanamycin | |
capreomycin | ||||||
amikacin | ||||||
ccsA | 620362 | p.Ala158Thr | missense_variant | 0.16 | kanamycin | |
capreomycin | ||||||
amikacin | ||||||
Rv0565c | 657269 | p.Ser68Pro | missense_variant | 0.93 | ethionamide | Uncertain significance |
nusG | 734424 | c.171G>A | synonymous_variant | 0.19 | rifampicin | |
nusG | 734442 | c.189G>A | synonymous_variant | 0.21 | rifampicin | |
nusG | 734451 | c.198G>C | synonymous_variant | 0.21 | rifampicin | |
nusG | 734457 | c.204C>G | synonymous_variant | 0.21 | rifampicin | |
nusG | 734472 | c.219T>C | synonymous_variant | 0.22 | rifampicin | |
nusG | 734475 | c.222T>C | synonymous_variant | 0.21 | rifampicin | Not assoc w R - Interim |
nusG | 734532 | c.279A>G | synonymous_variant | 0.24 | rifampicin | Not assoc w R - Interim |
nusG | 734556 | c.303C>T | synonymous_variant | 0.22 | rifampicin | |
nusG | 734559 | c.306T>C | synonymous_variant | 0.22 | rifampicin | |
nusG | 734580 | c.327T>C | synonymous_variant | 0.22 | rifampicin | Not assoc w R - Interim |
nusG | 734589 | c.336G>C | synonymous_variant | 0.2 | rifampicin | |
nusG | 734596 | c.343T>C | synonymous_variant | 0.22 | rifampicin | |
nusG | 734601 | c.348C>G | synonymous_variant | 0.2 | rifampicin | |
nusG | 734610 | c.357C>G | synonymous_variant | 0.17 | rifampicin | |
rpoB | 760115 | c.309C>T | synonymous_variant | 0.85 | rifampicin | Not assoc w R |
rpoB | 760139 | c.333A>G | synonymous_variant | 0.16 | rifampicin | Not assoc w R - Interim |
rpoB | 760142 | c.336C>G | synonymous_variant | 0.16 | rifampicin | |
rpoB | 760181 | c.375T>C | synonymous_variant | 0.22 | rifampicin | Not assoc w R - Interim |
rpoB | 760184 | c.378A>G | synonymous_variant | 0.23 | rifampicin | Not assoc w R - Interim |
rpoB | 760196 | c.390C>G | synonymous_variant | 0.24 | rifampicin | Not assoc w R - Interim |
rpoB | 760223 | c.417T>C | synonymous_variant | 0.24 | rifampicin | |
rpoB | 760235 | c.429T>C | synonymous_variant | 0.23 | rifampicin | Not assoc w R - Interim |
rpoB | 760283 | c.477G>C | synonymous_variant | 0.25 | rifampicin | Not assoc w R - Interim |
rpoB | 760298 | c.492G>C | synonymous_variant | 0.21 | rifampicin | Not assoc w R - Interim |
rpoB | 760307 | c.501T>C | synonymous_variant | 0.23 | rifampicin | |
rpoB | 760310 | c.504G>C | synonymous_variant | 0.23 | rifampicin | |
rpoB | 760319 | c.513C>T | synonymous_variant | 0.23 | rifampicin | |
rpoB | 760328 | c.522G>C | synonymous_variant | 0.22 | rifampicin | |
rpoB | 760331 | c.525G>C | synonymous_variant | 0.21 | rifampicin | |
rpoB | 760340 | c.534G>T | synonymous_variant | 0.21 | rifampicin | Not assoc w R - Interim |
rpoB | 760361 | c.555T>C | synonymous_variant | 0.22 | rifampicin | Not assoc w R - Interim |
rpoB | 760370 | c.564C>G | synonymous_variant | 0.22 | rifampicin | |
rpoB | 760376 | p.Asp190Glu | missense_variant | 0.21 | rifampicin | Uncertain significance |
rpoB | 760380 | p.Thr192Leu | missense_variant | 0.21 | rifampicin | |
rpoB | 760406 | c.600G>C | synonymous_variant | 0.22 | rifampicin | |
rpoB | 760412 | c.606C>G | synonymous_variant | 0.22 | rifampicin | |
rpoB | 760424 | c.618C>G | synonymous_variant | 0.23 | rifampicin | Not assoc w R - Interim |
rpoB | 760430 | c.624T>C | synonymous_variant | 0.23 | rifampicin | Not assoc w R - Interim |
rpoB | 760475 | c.669A>G | synonymous_variant | 0.18 | rifampicin | Not assoc w R - Interim |
rpoB | 760481 | c.675G>C | synonymous_variant | 0.18 | rifampicin | Not assoc w R - Interim |
rpoB | 760484 | c.678A>G | synonymous_variant | 0.17 | rifampicin | Not assoc w R - Interim |
rpoB | 760541 | c.735G>C | synonymous_variant | 0.17 | rifampicin | Not assoc w R - Interim |
rpoB | 760547 | c.741G>C | synonymous_variant | 0.18 | rifampicin | Not assoc w R - Interim |
rpoB | 760563 | p.Arg253Met | missense_variant | 0.17 | rifampicin | Uncertain significance |
rpoB | 760591 | p.Val262Ala | missense_variant | 0.19 | rifampicin | |
rpoB | 760634 | c.828T>C | synonymous_variant | 0.17 | rifampicin | Not assoc w R - Interim |
rpoB | 760670 | c.864G>C | synonymous_variant | 0.16 | rifampicin | |
rpoB | 760718 | c.912C>T | synonymous_variant | 0.19 | rifampicin | |
rpoB | 760724 | c.918T>C | synonymous_variant | 0.17 | rifampicin | Not assoc w R - Interim |
rpoB | 760934 | c.1128C>T | synonymous_variant | 0.15 | rifampicin | |
rpoB | 760982 | c.1176G>C | synonymous_variant | 0.19 | rifampicin | Not assoc w R - Interim |
rpoB | 760985 | c.1179G>C | synonymous_variant | 0.2 | rifampicin | Not assoc w R - Interim |
rpoB | 760991 | c.1185G>C | synonymous_variant | 0.19 | rifampicin | |
rpoB | 761006 | c.1200C>G | synonymous_variant | 0.22 | rifampicin | Not assoc w R - Interim |
rpoB | 761015 | c.1209G>C | synonymous_variant | 0.22 | rifampicin | Not assoc w R - Interim |
rpoB | 761021 | c.1215G>C | synonymous_variant | 0.23 | rifampicin | |
rpoB | 761027 | c.1221A>G | synonymous_variant | 0.23 | rifampicin | Not assoc w R - Interim |
rpoB | 761036 | c.1230G>C | synonymous_variant | 0.23 | rifampicin | Not assoc w R - Interim |
rpoB | 761037 | c.1231T>C | synonymous_variant | 0.23 | rifampicin | Not assoc w R - Interim |
rpoB | 761057 | c.1251G>C | synonymous_variant | 0.24 | rifampicin | Not assoc w R - Interim |
rpoB | 761102 | c.1296A>G | synonymous_variant | 0.25 | rifampicin | |
rpoB | 761123 | c.1317G>C | synonymous_variant | 0.24 | rifampicin | |
rpoB | 761129 | c.1323G>C | synonymous_variant | 0.23 | rifampicin | Not assoc w R - Interim |
rpoB | 761132 | c.1326G>T | synonymous_variant | 0.23 | rifampicin | Not assoc w R - Interim |
rpoB | 761133 | c.1327T>C | synonymous_variant | 0.24 | rifampicin | Not assoc w R - Interim |
rpoB | 761150 | c.1344A>C | synonymous_variant | 0.28 | rifampicin | Not assoc w R - Interim |
rpoB | 761153 | c.1347G>C | synonymous_variant | 0.28 | rifampicin | |
rpoB | 761165 | c.1359G>C | synonymous_variant | 0.25 | rifampicin | Not assoc w R - Interim |
rpoB | 761180 | c.1374A>C | synonymous_variant | 0.25 | rifampicin | Not assoc w R - Interim |
rpoB | 761189 | c.1383T>C | synonymous_variant | 0.24 | rifampicin | Not assoc w R - Interim |
rpoB | 761195 | c.1389G>C | synonymous_variant | 0.25 | rifampicin | Not assoc w R - Interim |
rpoB | 761207 | c.1401C>T | synonymous_variant | 0.26 | rifampicin | |
rpoB | 761213 | c.1407G>C | synonymous_variant | 0.24 | rifampicin | |
rpoB | 761219 | c.1413G>C | synonymous_variant | 0.23 | rifampicin | Not assoc w R - Interim |
rpoB | 761249 | c.1443A>G | synonymous_variant | 0.19 | rifampicin | Not assoc w R - Interim |
rpoB | 761255 | c.1449T>G | synonymous_variant | 0.19 | rifampicin | Not assoc w R - Interim |
rpoB | 761261 | c.1455G>T | synonymous_variant | 0.21 | rifampicin | Not assoc w R - Interim |
rpoB | 761306 | c.1500C>G | synonymous_variant | 0.23 | rifampicin | |
rpoB | 761327 | c.1521A>G | synonymous_variant | 0.24 | rifampicin | Not assoc w R - Interim |
rpoB | 761330 | c.1524G>C | synonymous_variant | 0.24 | rifampicin | |
rpoB | 761354 | c.1548C>T | synonymous_variant | 0.26 | rifampicin | |
rpoB | 761360 | c.1554T>C | synonymous_variant | 0.24 | rifampicin | Not assoc w R - Interim |
rpoB | 761362 | p.Ser519Thr | missense_variant | 0.24 | rifampicin | |
rpoB | 761373 | p.Val523His | missense_variant | 0.2 | rifampicin | |
rpoB | 761408 | c.1602G>C | synonymous_variant | 0.22 | rifampicin | |
rpoB | 761414 | c.1608A>G | synonymous_variant | 0.22 | rifampicin | Not assoc w R - Interim |
rpoB | 761423 | c.1617T>C | synonymous_variant | 0.22 | rifampicin | |
rpoB | 761435 | c.1629T>C | synonymous_variant | 0.21 | rifampicin | |
rpoB | 761438 | c.1632G>C | synonymous_variant | 0.21 | rifampicin | |
rpoB | 761439 | p.Asp545Lys | missense_variant | 0.21 | rifampicin | |
rpoB | 761444 | c.1638T>C | synonymous_variant | 0.22 | rifampicin | |
rpoB | 761447 | c.1641C>G | synonymous_variant | 0.21 | rifampicin | |
rpoB | 761452 | p.Val549Glu | missense_variant | 0.21 | rifampicin | |
rpoB | 761457 | p.Pro551Ser | missense_variant | 0.21 | rifampicin | |
rpoB | 761477 | c.1671C>G | synonymous_variant | 0.22 | rifampicin | |
rpoB | 761492 | c.1686G>C | synonymous_variant | 0.22 | rifampicin | |
rpoB | 761510 | c.1704T>C | synonymous_variant | 0.23 | rifampicin | |
rpoB | 761537 | c.1731C>G | synonymous_variant | 0.2 | rifampicin | Not assoc w R - Interim |
rpoB | 761570 | c.1764T>C | synonymous_variant | 0.19 | rifampicin | Not assoc w R - Interim |
rpoB | 761573 | c.1767C>G | synonymous_variant | 0.19 | rifampicin | Not assoc w R - Interim |
rpoB | 761579 | c.1773G>C | synonymous_variant | 0.2 | rifampicin | Not assoc w R - Interim |
rpoB | 761588 | c.1782C>T | synonymous_variant | 0.22 | rifampicin | |
rpoB | 761606 | c.1800C>G | synonymous_variant | 0.19 | rifampicin | |
rpoB | 761612 | c.1806G>C | synonymous_variant | 0.18 | rifampicin | Not assoc w R - Interim |
rpoB | 761615 | c.1809A>C | synonymous_variant | 0.18 | rifampicin | Not assoc w R - Interim |
rpoB | 761636 | c.1830G>T | synonymous_variant | 0.2 | rifampicin | Not assoc w R - Interim |
rpoB | 761645 | c.1839C>G | synonymous_variant | 0.2 | rifampicin | Not assoc w R - Interim |
rpoB | 761648 | c.1842T>C | synonymous_variant | 0.2 | rifampicin | |
rpoB | 761657 | c.1851C>G | synonymous_variant | 0.19 | rifampicin | Not assoc w R - Interim |
rpoB | 761675 | c.1869G>C | synonymous_variant | 0.2 | rifampicin | |
rpoB | 761720 | c.1914_1916delCGAinsGG | frameshift_variant&synonymous_variant | 0.22 | rifampicin | |
rpoB | 761727 | p.Ser641Gly | missense_variant | 0.21 | rifampicin | |
rpoB | 761728 | c.1923dupC | frameshift_variant | 0.22 | rifampicin | |
rpoB | 761732 | c.1926C>G | synonymous_variant | 0.22 | rifampicin | Not assoc w R - Interim |
rpoB | 761735 | c.1929C>G | synonymous_variant | 0.21 | rifampicin | |
rpoB | 761747 | c.1941G>C | synonymous_variant | 0.22 | rifampicin | |
rpoB | 761750 | c.1944G>C | synonymous_variant | 0.22 | rifampicin | |
rpoB | 761765 | c.1959T>C | synonymous_variant | 0.23 | rifampicin | |
rpoB | 761772 | p.His656Ala | missense_variant | 0.21 | rifampicin | |
rpoB | 761778 | p.Asn658Asp | missense_variant | 0.21 | rifampicin | |
rpoB | 761791 | p.Arg662His | missense_variant | 0.2 | rifampicin | |
rpoB | 761813 | c.2007T>C | synonymous_variant | 0.18 | rifampicin | |
rpoB | 761815 | p.Ala670Glu | missense_variant | 0.18 | rifampicin | |
rpoB | 761834 | c.2028T>C | synonymous_variant | 0.21 | rifampicin | |
rpoB | 761848 | p.Cys681Ser | missense_variant | 0.18 | rifampicin | |
rpoB | 761852 | c.2046C>G | synonymous_variant | 0.19 | rifampicin | |
rpoB | 761858 | c.2052G>C | synonymous_variant | 0.19 | rifampicin | |
rpoB | 761873 | c.2067A>C | synonymous_variant | 0.22 | rifampicin | |
rpoB | 761885 | c.2079T>C | synonymous_variant | 0.22 | rifampicin | |
rpoB | 761906 | c.2100C>G | synonymous_variant | 0.2 | rifampicin | |
rpoB | 761909 | c.2103T>C | synonymous_variant | 0.19 | rifampicin | |
rpoB | 761912 | c.2106T>C | synonymous_variant | 0.2 | rifampicin | |
rpoB | 761915 | p.Asp703Glu | missense_variant | 0.2 | rifampicin | |
rpoB | 761916 | p.Asp704Asn | missense_variant | 0.2 | rifampicin | |
rpoB | 761948 | c.2142G>C | synonymous_variant | 0.2 | rifampicin | Not assoc w R - Interim |
rpoB | 761954 | c.2148C>G | synonymous_variant | 0.22 | rifampicin | Not assoc w R - Interim |
rpoB | 762008 | c.2202C>T | synonymous_variant | 0.19 | rifampicin | Not assoc w R - Interim |
rpoB | 762014 | c.2208C>T | synonymous_variant | 0.18 | rifampicin | |
rpoB | 762017 | c.2211A>G | synonymous_variant | 0.18 | rifampicin | Not assoc w R - Interim |
rpoB | 762053 | c.2247T>C | synonymous_variant | 0.19 | rifampicin | Not assoc w R - Interim |
rpoB | 762062 | c.2256T>C | synonymous_variant | 0.19 | rifampicin | Not assoc w R - Interim |
rpoB | 762065 | c.2259T>C | synonymous_variant | 0.19 | rifampicin | Not assoc w R - Interim |
rpoB | 762083 | c.2277T>C | synonymous_variant | 0.19 | rifampicin | Not assoc w R - Interim |
rpoB | 762086 | c.2280G>C | synonymous_variant | 0.19 | rifampicin | Not assoc w R - Interim |
rpoB | 762101 | c.2295C>G | synonymous_variant | 0.2 | rifampicin | Not assoc w R - Interim |
rpoB | 762114 | p.Ile770Val | missense_variant | 0.2 | rifampicin | Uncertain significance |
rpoB | 762131 | c.2325C>G | synonymous_variant | 0.21 | rifampicin | |
rpoB | 762140 | c.2334G>C | synonymous_variant | 0.23 | rifampicin | |
rpoB | 762143 | c.2337T>C | synonymous_variant | 0.22 | rifampicin | |
rpoB | 762149 | c.2343G>C | synonymous_variant | 0.23 | rifampicin | Not assoc w R - Interim |
rpoB | 762167 | c.2361T>C | synonymous_variant | 0.24 | rifampicin | Not assoc w R - Interim |
rpoB | 762176 | c.2370T>C | synonymous_variant | 0.22 | rifampicin | Not assoc w R - Interim |
rpoB | 762185 | c.2379G>C | synonymous_variant | 0.21 | rifampicin | Not assoc w R - Interim |
rpoB | 762206 | c.2400C>G | synonymous_variant | 0.19 | rifampicin | |
rpoB | 762233 | c.2427G>C | synonymous_variant | 0.22 | rifampicin | Not assoc w R - Interim |
rpoB | 762246 | c.2440C>T | synonymous_variant | 0.2 | rifampicin | |
rpoB | 762254 | c.2448T>G | synonymous_variant | 0.19 | rifampicin | |
rpoB | 762257 | c.2451C>G | synonymous_variant | 0.18 | rifampicin | |
rpoB | 762266 | c.2460T>C | synonymous_variant | 0.17 | rifampicin | |
rpoB | 762284 | c.2478G>C | synonymous_variant | 0.16 | rifampicin | Not assoc w R - Interim |
rpoB | 762317 | c.2511A>G | synonymous_variant | 0.18 | rifampicin | Not assoc w R - Interim |
rpoB | 762329 | c.2523G>C | synonymous_variant | 0.17 | rifampicin | Not assoc w R - Interim |
rpoB | 762338 | c.2532T>C | synonymous_variant | 0.18 | rifampicin | |
rpoB | 762347 | c.2541T>C | synonymous_variant | 0.18 | rifampicin | |
rpoB | 762362 | p.Glu852Asp | missense_variant | 0.18 | rifampicin | |
rpoB | 762369 | c.2563T>C | synonymous_variant | 0.19 | rifampicin | |
rpoC | 762398 | c.-972T>C | upstream_gene_variant | 0.2 | rifampicin | |
rpoC | 762401 | c.-969G>C | upstream_gene_variant | 0.2 | rifampicin | |
rpoB | 762404 | c.2598T>C | synonymous_variant | 0.21 | rifampicin | Not assoc w R - Interim |
rpoC | 762410 | c.-960T>C | upstream_gene_variant | 0.23 | rifampicin | |
rpoB | 762416 | c.2610A>G | synonymous_variant | 0.23 | rifampicin | Not assoc w R - Interim |
rpoC | 762419 | c.-951C>G | upstream_gene_variant | 0.23 | rifampicin | |
rpoC | 762434 | c.-936T>C | upstream_gene_variant | 0.22 | rifampicin | |
rpoB | 762449 | c.2643C>A | synonymous_variant | 0.22 | rifampicin | Not assoc w R - Interim |
rpoC | 762467 | c.-903C>T | upstream_gene_variant | 0.21 | rifampicin | |
rpoB | 762490 | p.Val895Asp | missense_variant | 0.16 | rifampicin | |
rpoC | 762509 | c.-861T>G | upstream_gene_variant | 0.17 | rifampicin | |
rpoB | 762510 | p.Ala902Pro | missense_variant | 0.17 | rifampicin | Uncertain significance |
rpoC | 762521 | c.-849C>T | upstream_gene_variant | 0.18 | rifampicin | |
rpoB | 762929 | c.3123G>C | synonymous_variant | 0.25 | rifampicin | Not assoc w R - Interim |
rpoC | 762989 | c.-381G>C | upstream_gene_variant | 0.25 | rifampicin | |
rpoB | 762995 | c.3189G>T | synonymous_variant | 0.24 | rifampicin | Not assoc w R - Interim |
rpoC | 763013 | c.-357C>G | upstream_gene_variant | 0.24 | rifampicin | |
rpoB | 763028 | c.3222T>C | synonymous_variant | 0.26 | rifampicin | Not assoc w R - Interim |
rpoB | 763031 | c.3225T>G | synonymous_variant | 0.26 | rifampicin | Not assoc w R - Interim |
rpoB | 763034 | c.3228C>G | synonymous_variant | 0.25 | rifampicin | Not assoc w R - Interim |
rpoB | 763040 | c.3234C>G | synonymous_variant | 0.25 | rifampicin | Not assoc w R - Interim |
rpoB | 763070 | c.3264T>C | synonymous_variant | 0.24 | rifampicin | Not assoc w R - Interim |
rpoB | 763085 | c.3279C>G | synonymous_variant | 0.21 | rifampicin | Not assoc w R - Interim |
rpoB | 763115 | c.3309T>C | synonymous_variant | 0.17 | rifampicin | Not assoc w R - Interim |
rpoB | 763136 | c.3330C>T | synonymous_variant | 0.17 | rifampicin | Not assoc w R - Interim |
rpoC | 763148 | c.-222G>C | upstream_gene_variant | 0.17 | rifampicin | |
rpoC | 763190 | c.-180C>T | upstream_gene_variant | 0.16 | rifampicin | |
rpoC | 763402 | c.33C>G | synonymous_variant | 0.19 | rifampicin | |
rpoC | 763411 | c.42T>G | synonymous_variant | 0.21 | rifampicin | Not assoc w R - Interim |
rpoC | 763414 | c.45T>C | synonymous_variant | 0.21 | rifampicin | |
rpoC | 763441 | c.72C>T | synonymous_variant | 0.25 | rifampicin | |
rpoC | 763444 | c.75T>C | synonymous_variant | 0.25 | rifampicin | Not assoc w R - Interim |
rpoC | 763456 | c.87A>G | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoC | 763486 | c.117T>G | synonymous_variant | 0.29 | rifampicin | |
rpoC | 763528 | c.159G>A | synonymous_variant | 0.3 | rifampicin | Not assoc w R - Interim |
rpoC | 763546 | c.177A>G | synonymous_variant | 0.31 | rifampicin | Not assoc w R - Interim |
rpoC | 763570 | c.201G>C | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoC | 763573 | c.204G>C | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoC | 763594 | c.225C>T | synonymous_variant | 0.28 | rifampicin | Not assoc w R - Interim |
rpoC | 763603 | c.234C>T | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoC | 763633 | c.264T>C | synonymous_variant | 0.28 | rifampicin | Not assoc w R - Interim |
rpoC | 763636 | c.267T>C | synonymous_variant | 0.27 | rifampicin | |
rpoC | 763660 | c.291T>G | synonymous_variant | 0.27 | rifampicin | Not assoc w R - Interim |
rpoC | 763675 | c.306C>G | synonymous_variant | 0.25 | rifampicin | Not assoc w R - Interim |
rpoC | 763696 | c.327T>C | synonymous_variant | 0.25 | rifampicin | Not assoc w R - Interim |
rpoC | 763702 | c.333C>G | synonymous_variant | 0.25 | rifampicin | Not assoc w R - Interim |
rpoC | 763717 | c.348T>C | synonymous_variant | 0.23 | rifampicin | Not assoc w R - Interim |
rpoC | 763723 | c.354G>C | synonymous_variant | 0.23 | rifampicin | |
rpoC | 763732 | c.363C>G | synonymous_variant | 0.25 | rifampicin | |
rpoC | 763741 | c.372C>T | synonymous_variant | 0.26 | rifampicin | |
rpoC | 763744 | c.375G>C | synonymous_variant | 0.26 | rifampicin | |
rpoC | 763765 | c.396T>C | synonymous_variant | 0.26 | rifampicin | |
rpoC | 763774 | c.405G>C | synonymous_variant | 0.26 | rifampicin | |
rpoC | 763807 | c.438T>C | synonymous_variant | 0.24 | rifampicin | Not assoc w R - Interim |
rpoC | 763816 | c.447C>G | synonymous_variant | 0.23 | rifampicin | |
rpoC | 763835 | p.Ala156Met | missense_variant | 0.19 | rifampicin | |
rpoC | 763853 | p.Val162Ile | missense_variant | 0.19 | rifampicin | |
rpoC | 763858 | c.489A>G | synonymous_variant | 0.19 | rifampicin | |
rpoC | 763872 | p.Gly168Ala | missense_variant | 0.19 | rifampicin | |
rpoC | 763876 | p.Glu169Asp | missense_variant | 0.19 | rifampicin | |
rpoC | 763879 | c.510A>G | synonymous_variant | 0.19 | rifampicin | |
rpoC | 763888 | c.519G>C | synonymous_variant | 0.18 | rifampicin | |
rpoC | 763891 | c.522G>C | synonymous_variant | 0.18 | rifampicin | |
rpoC | 763894 | c.525A>G | synonymous_variant | 0.18 | rifampicin | |
rpoC | 763900 | c.531G>C | synonymous_variant | 0.19 | rifampicin | Not assoc w R - Interim |
rpoC | 763936 | c.567C>G | synonymous_variant | 0.2 | rifampicin | |
rpoC | 763939 | c.570G>A | synonymous_variant | 0.2 | rifampicin | |
rpoC | 763942 | c.573C>G | synonymous_variant | 0.2 | rifampicin | Not assoc w R - Interim |
rpoC | 763945 | c.576T>C | synonymous_variant | 0.2 | rifampicin | |
rpoC | 763948 | c.579G>A | synonymous_variant | 0.2 | rifampicin | Not assoc w R - Interim |
rpoC | 763949 | c.580C>A | synonymous_variant | 0.2 | rifampicin | |
rpoC | 763954 | c.585C>G | synonymous_variant | 0.21 | rifampicin | |
rpoC | 763963 | c.594C>T | synonymous_variant | 0.22 | rifampicin | Not assoc w R - Interim |
rpoC | 763987 | c.618C>T | synonymous_variant | 0.22 | rifampicin | |
rpoC | 763991 | p.Ile208Leu | missense_variant | 0.19 | rifampicin | |
rpoC | 763996 | c.627T>C | synonymous_variant | 0.2 | rifampicin | |
rpoC | 764002 | c.633C>G | synonymous_variant | 0.22 | rifampicin | |
rpoC | 764005 | c.636G>C | synonymous_variant | 0.22 | rifampicin | Not assoc w R - Interim |
rpoC | 764024 | c.655_657delTTGinsCTC | synonymous_variant | 0.2 | rifampicin | |
rpoC | 764032 | p.Asp221Glu | missense_variant | 0.2 | rifampicin | |
rpoC | 764040 | p.Ser224Thr | missense_variant | 0.2 | rifampicin | |
rpoC | 764044 | c.675T>C | synonymous_variant | 0.2 | rifampicin | |
rpoC | 764059 | c.690G>T | synonymous_variant | 0.21 | rifampicin | |
rpoC | 764083 | c.714A>G | synonymous_variant | 0.22 | rifampicin | |
rpoC | 764098 | c.729A>G | synonymous_variant | 0.2 | rifampicin | Not assoc w R - Interim |
rpoC | 764101 | c.732C>G | synonymous_variant | 0.2 | rifampicin | Not assoc w R - Interim |
rpoC | 764102 | p.Val245Ile | missense_variant | 0.19 | rifampicin | |
rpoC | 764107 | c.738C>T | synonymous_variant | 0.18 | rifampicin | Not assoc w R - Interim |
rpoC | 764112 | p.Tyr248Phe | missense_variant | 0.18 | rifampicin | |
rpoC | 764116 | c.747C>T | synonymous_variant | 0.19 | rifampicin | Not assoc w R - Interim |
rpoC | 764131 | c.762T>C | synonymous_variant | 0.2 | rifampicin | |
rpoC | 764140 | c.771C>T | synonymous_variant | 0.2 | rifampicin | Not assoc w R - Interim |
rpoC | 764195 | p.Ser276Thr | missense_variant | 0.16 | rifampicin | |
rpoC | 764203 | c.834G>C | synonymous_variant | 0.16 | rifampicin | |
rpoC | 764215 | c.846A>G | synonymous_variant | 0.19 | rifampicin | |
rpoC | 764236 | c.867G>A | synonymous_variant | 0.21 | rifampicin | Not assoc w R - Interim |
rpoC | 764248 | c.879C>G | synonymous_variant | 0.21 | rifampicin | Not assoc w R - Interim |
rpoC | 764257 | c.888G>C | synonymous_variant | 0.18 | rifampicin | |
rpoC | 764338 | c.969G>A | synonymous_variant | 0.19 | rifampicin | Not assoc w R - Interim |
rpoC | 764353 | c.984G>C | synonymous_variant | 0.19 | rifampicin | |
rpoC | 764365 | c.996C>T | synonymous_variant | 0.18 | rifampicin | Not assoc w R - Interim |
rpoC | 764380 | c.1011G>C | synonymous_variant | 0.17 | rifampicin | Not assoc w R - Interim |
rpoC | 764381 | p.Ser338Thr | missense_variant | 0.16 | rifampicin | |
rpoC | 764389 | p.Leu340Phe | missense_variant | 0.17 | rifampicin | Uncertain significance |
rpoC | 764405 | c.1036A>C | synonymous_variant | 0.21 | rifampicin | Not assoc w R - Interim |
rpoC | 764419 | c.1050C>G | synonymous_variant | 0.24 | rifampicin | |
rpoC | 764431 | c.1062G>C | synonymous_variant | 0.25 | rifampicin | Not assoc w R - Interim |
rpoC | 764434 | c.1065A>G | synonymous_variant | 0.24 | rifampicin | Not assoc w R - Interim |
rpoC | 764446 | c.1077T>C | synonymous_variant | 0.23 | rifampicin | |
rpoC | 764449 | c.1080G>C | synonymous_variant | 0.23 | rifampicin | |
rpoC | 764452 | c.1083T>C | synonymous_variant | 0.23 | rifampicin | |
rpoC | 764458 | c.1089G>C | synonymous_variant | 0.24 | rifampicin | Not assoc w R - Interim |
rpoC | 764461 | c.1092A>G | synonymous_variant | 0.24 | rifampicin | Not assoc w R - Interim |
rpoC | 764489 | c.1120C>T | synonymous_variant | 0.29 | rifampicin | |
rpoC | 764497 | c.1128A>G | synonymous_variant | 0.3 | rifampicin | Not assoc w R - Interim |
rpoC | 764510 | c.1141C>T | synonymous_variant | 0.3 | rifampicin | Not assoc w R - Interim |
rpoC | 764521 | c.1152T>C | synonymous_variant | 0.3 | rifampicin | Not assoc w R - Interim |
rpoC | 764527 | c.1158C>T | synonymous_variant | 0.31 | rifampicin | Not assoc w R - Interim |
rpoC | 764536 | c.1167G>C | synonymous_variant | 0.31 | rifampicin | |
rpoC | 764539 | c.1170C>G | synonymous_variant | 0.3 | rifampicin | Not assoc w R - Interim |
rpoC | 764554 | c.1185C>T | synonymous_variant | 0.3 | rifampicin | |
rpoC | 764560 | c.1191T>C | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoC | 764566 | c.1197C>G | synonymous_variant | 0.3 | rifampicin | Not assoc w R - Interim |
rpoC | 764575 | c.1206T>G | synonymous_variant | 0.32 | rifampicin | Not assoc w R - Interim |
rpoC | 764581 | c.1212T>C | synonymous_variant | 0.31 | rifampicin | |
rpoC | 764593 | c.1224C>T | synonymous_variant | 0.31 | rifampicin | |
rpoC | 764611 | c.1242G>T | synonymous_variant | 0.31 | rifampicin | Not assoc w R - Interim |
rpoC | 764650 | c.1281G>C | synonymous_variant | 0.28 | rifampicin | |
rpoC | 764651 | c.1282_1284delTCGinsAGC | synonymous_variant | 0.28 | rifampicin | |
rpoC | 764752 | c.1383G>C | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoC | 764764 | c.1395T>C | synonymous_variant | 0.31 | rifampicin | Not assoc w R - Interim |
rpoC | 764809 | c.1440C>T | synonymous_variant | 0.28 | rifampicin | Not assoc w R |
rpoC | 764815 | c.1446A>G | synonymous_variant | 0.28 | rifampicin | Not assoc w R - Interim |
rpoC | 764827 | c.1458G>C | synonymous_variant | 0.31 | rifampicin | Not assoc w R - Interim |
rpoC | 764858 | c.1489T>C | synonymous_variant | 0.26 | rifampicin | Not assoc w R - Interim |
rpoC | 764872 | c.1503A>G | synonymous_variant | 0.25 | rifampicin | Not assoc w R - Interim |
rpoC | 764888 | c.1519T>C | synonymous_variant | 0.24 | rifampicin | Not assoc w R - Interim |
rpoC | 764911 | c.1542A>G | synonymous_variant | 0.25 | rifampicin | |
rpoC | 764932 | c.1563C>A | synonymous_variant | 0.2 | rifampicin | Not assoc w R - Interim |
rpoC | 764935 | c.1566T>C | synonymous_variant | 0.2 | rifampicin | |
rpoC | 764948 | c.1579T>C | synonymous_variant | 0.2 | rifampicin | Not assoc w R - Interim |
rpoC | 764968 | c.1599T>C | synonymous_variant | 0.2 | rifampicin | Not assoc w R - Interim |
rpoC | 764995 | c.1626C>G | synonymous_variant | 0.21 | rifampicin | Not assoc w R |
rpoC | 765019 | c.1650A>G | synonymous_variant | 0.19 | rifampicin | Not assoc w R - Interim |
rpoC | 765034 | c.1665T>C | synonymous_variant | 0.18 | rifampicin | |
rpoC | 765040 | c.1671T>C | synonymous_variant | 0.17 | rifampicin | Not assoc w R - Interim |
rpoC | 765041 | c.1672T>C | synonymous_variant | 0.17 | rifampicin | Not assoc w R - Interim |
rpoC | 765047 | c.1678T>C | synonymous_variant | 0.19 | rifampicin | Not assoc w R - Interim |
rpoC | 765053 | c.1684_1685delTCinsAG | synonymous_variant | 0.19 | rifampicin | |
rpoC | 765150 | p.Gly594Glu | missense_variant | 0.96 | rifampicin | Not assoc w R |
rpoC | 765383 | p.Met672Leu | missense_variant | 0.22 | rifampicin | Uncertain significance |
rpoC | 765404 | p.Leu679Val | missense_variant | 0.24 | rifampicin | |
rpoC | 765409 | c.2040T>C | synonymous_variant | 0.23 | rifampicin | |
rpoC | 765421 | c.2052C>G | synonymous_variant | 0.22 | rifampicin | Not assoc w R - Interim |
rpoC | 765478 | c.2109T>C | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoC | 765499 | c.2130C>G | synonymous_variant | 0.32 | rifampicin | Not assoc w R - Interim |
rpoC | 765529 | c.2160C>T | synonymous_variant | 0.34 | rifampicin | |
rpoC | 765541 | c.2172C>G | synonymous_variant | 0.34 | rifampicin | |
rpoC | 765553 | c.2184C>T | synonymous_variant | 0.3 | rifampicin | Not assoc w R - Interim |
rpoC | 765556 | c.2187G>C | synonymous_variant | 0.31 | rifampicin | |
rpoC | 765559 | c.2190G>C | synonymous_variant | 0.29 | rifampicin | |
rpoC | 765580 | c.2211G>C | synonymous_variant | 0.3 | rifampicin | |
rpoC | 765613 | p.His748Gln | missense_variant | 0.3 | rifampicin | |
rpoC | 765625 | c.2256C>G | synonymous_variant | 0.27 | rifampicin | Not assoc w R - Interim |
rpoC | 765631 | p.Asp754Glu | missense_variant | 0.27 | rifampicin | |
rpoC | 765700 | c.2331T>C | synonymous_variant | 0.31 | rifampicin | Not assoc w R - Interim |
rpoC | 765734 | c.2365T>C | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoC | 765739 | c.2370G>T | synonymous_variant | 0.28 | rifampicin | |
rpoC | 765751 | c.2382C>G | synonymous_variant | 0.26 | rifampicin | |
rpoC | 765753 | p.Asp795Ala | missense_variant | 0.26 | rifampicin | Uncertain significance |
rpoC | 765772 | c.2403C>G | synonymous_variant | 0.3 | rifampicin | |
rpoC | 765784 | c.2415C>G | synonymous_variant | 0.3 | rifampicin | |
rpoC | 765787 | c.2418C>T | synonymous_variant | 0.3 | rifampicin | |
rpoC | 765793 | c.2424C>G | synonymous_variant | 0.3 | rifampicin | |
rpoC | 765796 | c.2427C>T | synonymous_variant | 0.3 | rifampicin | |
rpoC | 765811 | c.2442T>C | synonymous_variant | 0.31 | rifampicin | Not assoc w R - Interim |
rpoC | 765814 | c.2445A>G | synonymous_variant | 0.33 | rifampicin | Not assoc w R - Interim |
rpoC | 765826 | c.2457T>C | synonymous_variant | 0.32 | rifampicin | Not assoc w R - Interim |
rpoC | 765835 | c.2466C>T | synonymous_variant | 0.31 | rifampicin | Not assoc w R - Interim |
rpoC | 765850 | c.2481G>C | synonymous_variant | 0.34 | rifampicin | Not assoc w R - Interim |
rpoC | 765883 | c.2514C>G | synonymous_variant | 0.3 | rifampicin | |
rpoC | 765886 | c.2517C>G | synonymous_variant | 0.3 | rifampicin | |
rpoC | 765892 | c.2523T>C | synonymous_variant | 0.31 | rifampicin | Not assoc w R - Interim |
rpoC | 765937 | c.2568T>C | synonymous_variant | 0.33 | rifampicin | Not assoc w R - Interim |
rpoC | 765967 | c.2598C>T | synonymous_variant | 0.32 | rifampicin | Not assoc w R - Interim |
rpoC | 765982 | c.2613C>G | synonymous_variant | 0.3 | rifampicin | |
rpoC | 765994 | c.2625A>T | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoC | 766010 | c.2641_2642delTCinsAG | synonymous_variant | 0.26 | rifampicin | |
rpoC | 766021 | c.2652G>C | synonymous_variant | 0.27 | rifampicin | |
rpoC | 766027 | c.2658G>C | synonymous_variant | 0.28 | rifampicin | |
rpoC | 766030 | c.2661C>G | synonymous_variant | 0.28 | rifampicin | |
rpoC | 766043 | p.Gln892Glu | missense_variant | 0.27 | rifampicin | |
rpoC | 766054 | c.2685C>G | synonymous_variant | 0.28 | rifampicin | |
rpoC | 766082 | p.Ala905Gln | missense_variant | 0.26 | rifampicin | |
rpoC | 766096 | c.2727G>C | synonymous_variant | 0.27 | rifampicin | |
rpoC | 766129 | c.2760C>G | synonymous_variant | 0.22 | rifampicin | |
rpoC | 766135 | c.2766G>A | synonymous_variant | 0.21 | rifampicin | Not assoc w R - Interim |
rpoC | 766141 | c.2772C>T | synonymous_variant | 0.2 | rifampicin | |
rpoC | 766142 | c.2773C>T | synonymous_variant | 0.2 | rifampicin | Not assoc w R - Interim |
rpoC | 766357 | c.2988C>T | synonymous_variant | 0.17 | rifampicin | |
rpoC | 766363 | c.2994G>C | synonymous_variant | 0.18 | rifampicin | |
rpoC | 766381 | c.3012C>T | synonymous_variant | 0.21 | rifampicin | |
rpoC | 766384 | c.3015A>G | synonymous_variant | 0.22 | rifampicin | |
rpoC | 766408 | c.3039C>G | synonymous_variant | 0.22 | rifampicin | |
rpoC | 766411 | c.3042C>G | synonymous_variant | 0.23 | rifampicin | |
rpoC | 766426 | c.3057C>T | synonymous_variant | 0.28 | rifampicin | |
rpoC | 766447 | c.3078T>C | synonymous_variant | 0.28 | rifampicin | |
rpoC | 766462 | c.3093G>C | synonymous_variant | 0.27 | rifampicin | |
rpoC | 766483 | c.3114G>C | synonymous_variant | 0.26 | rifampicin | |
rpoC | 766484 | p.Val1039Ile | missense_variant | 0.26 | rifampicin | Uncertain significance |
rpoC | 766492 | c.3123T>C | synonymous_variant | 0.28 | rifampicin | |
rpoC | 766522 | c.3153C>G | synonymous_variant | 0.26 | rifampicin | |
rpoC | 766528 | c.3159T>C | synonymous_variant | 0.25 | rifampicin | |
rpoC | 766531 | c.3162G>C | synonymous_variant | 0.27 | rifampicin | |
rpoC | 766540 | p.Asp1057Glu | missense_variant | 0.28 | rifampicin | |
rpoC | 766549 | c.3180G>C | synonymous_variant | 0.25 | rifampicin | |
rpoC | 766573 | c.3204T>C | synonymous_variant | 0.27 | rifampicin | |
rpoC | 766582 | c.3213C>G | synonymous_variant | 0.26 | rifampicin | |
rpoC | 766583 | p.Gly1072Ser | missense_variant | 0.26 | rifampicin | |
rpoC | 766591 | c.3222A>G | synonymous_variant | 0.26 | rifampicin | |
rpoC | 766594 | c.3225G>C | synonymous_variant | 0.26 | rifampicin | |
rpoC | 766597 | c.3228C>G | synonymous_variant | 0.27 | rifampicin | Not assoc w R - Interim |
rpoC | 766607 | p.Ile1080Leu | missense_variant | 0.3 | rifampicin | |
rpoC | 766625 | c.3256C>T | synonymous_variant | 0.26 | rifampicin | Not assoc w R - Interim |
rpoC | 766630 | c.3261G>C | synonymous_variant | 0.25 | rifampicin | |
rpoC | 766657 | c.3288A>G | synonymous_variant | 0.23 | rifampicin | |
rpoC | 766672 | c.3303T>C | synonymous_variant | 0.2 | rifampicin | |
rpoC | 766673 | p.Gly1102Asn | missense_variant | 0.2 | rifampicin | |
rpoC | 766726 | c.3357T>C | synonymous_variant | 0.23 | rifampicin | |
rpoC | 766738 | c.3369G>C | synonymous_variant | 0.22 | rifampicin | |
rpoC | 766765 | c.3396A>C | synonymous_variant | 0.21 | rifampicin | Not assoc w R - Interim |
rpoC | 766774 | c.3405T>C | synonymous_variant | 0.21 | rifampicin | |
rpoC | 766801 | c.3432C>G | synonymous_variant | 0.23 | rifampicin | |
rpoC | 766804 | c.3435A>G | synonymous_variant | 0.25 | rifampicin | Not assoc w R - Interim |
rpoC | 766861 | c.3492G>C | synonymous_variant | 0.25 | rifampicin | Not assoc w R - Interim |
rpoC | 766864 | c.3495G>C | synonymous_variant | 0.25 | rifampicin | |
rpoC | 766876 | c.3507C>T | synonymous_variant | 0.27 | rifampicin | Not assoc w R - Interim |
rpoC | 766882 | c.3513C>T | synonymous_variant | 0.27 | rifampicin | Not assoc w R - Interim |
rpoC | 766900 | c.3531T>C | synonymous_variant | 0.29 | rifampicin | |
rpoC | 766933 | c.3564A>G | synonymous_variant | 0.26 | rifampicin | |
rpoC | 766945 | c.3576A>G | synonymous_variant | 0.3 | rifampicin | Not assoc w R - Interim |
rpoC | 766963 | c.3594T>C | synonymous_variant | 0.31 | rifampicin | Not assoc w R - Interim |
rpoC | 766972 | c.3603G>C | synonymous_variant | 0.3 | rifampicin | |
rpoC | 766996 | c.3627C>T | synonymous_variant | 0.28 | rifampicin | Not assoc w R - Interim |
rpoC | 767009 | c.3640_3642delTCGinsAGC | synonymous_variant | 0.28 | rifampicin | |
rpoC | 767014 | c.3645G>C | synonymous_variant | 0.28 | rifampicin | |
rpoC | 767033 | c.3664_3666delTCGinsAGC | synonymous_variant | 0.3 | rifampicin | |
rpoC | 767059 | c.3690T>G | synonymous_variant | 0.31 | rifampicin | Not assoc w R - Interim |
rpoC | 767062 | c.3693C>A | synonymous_variant | 0.31 | rifampicin | |
rpoC | 767098 | c.3729T>C | synonymous_variant | 0.26 | rifampicin | Not assoc w R - Interim |
rpoC | 767111 | c.3742C>T | synonymous_variant | 0.25 | rifampicin | |
rpoC | 767119 | c.3750A>G | synonymous_variant | 0.25 | rifampicin | Not assoc w R - Interim |
rpoC | 767134 | c.3765C>A | synonymous_variant | 0.25 | rifampicin | |
rpoC | 767158 | c.3789T>G | synonymous_variant | 0.21 | rifampicin | |
rpoC | 767180 | p.Ala1271Gln | missense_variant | 0.16 | rifampicin | |
rpoC | 767206 | c.3837C>G | synonymous_variant | 0.18 | rifampicin | Not assoc w R - Interim |
rpoC | 767209 | c.3840T>C | synonymous_variant | 0.17 | rifampicin | Not assoc w R - Interim |
rpoC | 767212 | c.3843G>C | synonymous_variant | 0.17 | rifampicin | |
rpoC | 767221 | c.3852C>G | synonymous_variant | 0.18 | rifampicin | Not assoc w R - Interim |
mmpL5 | 775639 | p.Ile948Val | missense_variant | 1.0 | bedaquiline | Not assoc w R - Interim |
clofazimine | Not assoc w R | |||||
rpsL | 781395 | c.-165T>C | upstream_gene_variant | 1.0 | streptomycin | Not assoc w R |
rpsL | 781700 | c.141G>C | synonymous_variant | 0.18 | streptomycin | |
rpsL | 781703 | c.144G>T | synonymous_variant | 0.18 | streptomycin | |
rpsL | 781715 | c.156T>C | synonymous_variant | 0.19 | streptomycin | |
rpsL | 781728 | c.169T>C | synonymous_variant | 0.19 | streptomycin | |
rpsL | 781736 | c.177T>C | synonymous_variant | 0.19 | streptomycin | |
rpsL | 781742 | c.183C>T | synonymous_variant | 0.2 | streptomycin | |
rpsL | 781748 | c.189C>G | synonymous_variant | 0.2 | streptomycin | |
rpsL | 781754 | c.195G>C | synonymous_variant | 0.2 | streptomycin | |
rpsL | 781760 | c.201T>C | synonymous_variant | 0.2 | streptomycin | |
rpsL | 781772 | c.213C>A | synonymous_variant | 0.2 | streptomycin | |
rpsL | 781808 | c.249C>T | synonymous_variant | 0.23 | streptomycin | |
rpsL | 781811 | c.252C>T | synonymous_variant | 0.22 | streptomycin | |
rpsL | 781832 | c.273T>C | synonymous_variant | 0.22 | streptomycin | |
rpsL | 781838 | c.279G>C | synonymous_variant | 0.21 | streptomycin | |
rpsL | 781841 | c.282C>G | synonymous_variant | 0.22 | streptomycin | |
rpsL | 781865 | c.306G>C | synonymous_variant | 0.2 | streptomycin | |
rpsL | 781868 | c.309T>C | synonymous_variant | 0.19 | streptomycin | |
rpsL | 781871 | c.312G>C | synonymous_variant | 0.19 | streptomycin | |
rpsL | 781877 | c.318T>C | synonymous_variant | 0.2 | streptomycin | |
rpsL | 781892 | c.333A>G | synonymous_variant | 0.2 | streptomycin | |
rpsL | 781898 | c.339A>T | synonymous_variant | 0.2 | streptomycin | |
rpsL | 781916 | c.357T>C | synonymous_variant | 0.21 | streptomycin | |
rpsL | 781929 | p.Gly124Ser | missense_variant | 0.24 | streptomycin | Uncertain significance |
rplC | 800612 | c.-197A>G | upstream_gene_variant | 0.16 | linezolid | |
rplC | 800618 | c.-191T>C | upstream_gene_variant | 0.15 | linezolid | |
rplC | 800627 | c.-182C>T | upstream_gene_variant | 0.17 | linezolid | |
rplC | 800648 | c.-161A>T | upstream_gene_variant | 0.21 | linezolid | |
rplC | 800654 | c.-155T>C | upstream_gene_variant | 0.22 | linezolid | |
rplC | 800693 | c.-116A>G | upstream_gene_variant | 0.21 | linezolid | |
rplC | 800703 | c.-106T>C | upstream_gene_variant | 0.23 | linezolid | |
rplC | 800715 | c.-94A>C | upstream_gene_variant | 0.23 | linezolid | |
rplC | 800720 | c.-89T>C | upstream_gene_variant | 0.23 | linezolid | |
rplC | 800723 | c.-86C>G | upstream_gene_variant | 0.23 | linezolid | |
rplC | 800747 | c.-62C>G | upstream_gene_variant | 0.24 | linezolid | |
rplC | 800771 | c.-38C>T | upstream_gene_variant | 0.23 | linezolid | |
rplC | 800794 | c.-15A>G | upstream_gene_variant | 0.22 | linezolid | |
rplC | 800796 | c.-13A>G | upstream_gene_variant | 0.22 | linezolid | |
rplC | 800798 | c.-10_-9delGG | upstream_gene_variant | 0.22 | linezolid | |
rplC | 800814 | c.6A>G | synonymous_variant | 0.26 | linezolid | |
rplC | 800817 | c.9A>T | synonymous_variant | 0.25 | linezolid | |
rplC | 800844 | c.36T>C | synonymous_variant | 0.23 | linezolid | |
rplC | 800865 | c.57A>G | synonymous_variant | 0.21 | linezolid | |
rplC | 800867 | p.Ser20Asn | missense_variant | 0.2 | linezolid | |
rplC | 800874 | c.66A>G | synonymous_variant | 0.19 | linezolid | |
rplC | 800875 | p.Val23Ile | missense_variant | 0.18 | linezolid | |
rplC | 800880 | c.72A>G | synonymous_variant | 0.18 | linezolid | |
rplC | 800889 | c.81C>G | synonymous_variant | 0.19 | linezolid | |
rplC | 800892 | c.84G>C | synonymous_variant | 0.19 | linezolid | |
rplC | 801367 | p.Ala187Thr | missense_variant | 0.14 | linezolid | |
rplC | 801402 | c.594T>C | synonymous_variant | 0.17 | linezolid | |
rplC | 801405 | c.597T>C | synonymous_variant | 0.17 | linezolid | |
rplC | 801427 | p.Met207Val | missense_variant | 0.16 | linezolid | |
rplC | 801438 | c.630T>C | synonymous_variant | 0.17 | linezolid | |
rplC | 801442 | p.Ile212Val | missense_variant | 0.18 | linezolid | |
fbiC | 1303884 | c.954T>G | synonymous_variant | 0.17 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303905 | c.975G>C | synonymous_variant | 0.19 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303920 | c.990C>T | synonymous_variant | 0.16 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303932 | c.1002G>T | synonymous_variant | 0.16 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303961 | p.Arg344Leu | missense_variant | 0.15 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303971 | c.1041T>C | synonymous_variant | 0.16 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1303980 | c.1050G>A | synonymous_variant | 0.17 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304008 | c.1078T>C | synonymous_variant | 0.17 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304727 | c.1797A>G | synonymous_variant | 0.16 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304742 | c.1812T>C | synonymous_variant | 0.19 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304757 | c.1827A>G | synonymous_variant | 0.2 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304778 | c.1848T>C | synonymous_variant | 0.22 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304784 | c.1854T>C | synonymous_variant | 0.22 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304787 | c.1857T>G | synonymous_variant | 0.22 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304808 | c.1878C>G | synonymous_variant | 0.2 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304811 | c.1881C>G | synonymous_variant | 0.2 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304817 | c.1887T>C | synonymous_variant | 0.21 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304829 | c.1899T>C | synonymous_variant | 0.21 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304832 | c.1902C>T | synonymous_variant | 0.2 | pretomanid | |
delamanid | Not assoc w R - Interim | |||||
clofazimine | Not assoc w R - Interim | |||||
fbiC | 1304856 | c.1926C>G | synonymous_variant | 0.22 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304862 | c.1932G>A | synonymous_variant | 0.2 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304869 | c.1939C>T | synonymous_variant | 0.21 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304875 | p.Ile649Val | missense_variant | 0.2 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304883 | p.Glu651Asp | missense_variant | 0.21 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304891 | p.Ile654Thr | missense_variant | 0.21 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304893 | p.Gly655Ser | missense_variant | 0.21 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304907 | c.1977C>G | synonymous_variant | 0.22 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304910 | c.1980G>C | synonymous_variant | 0.22 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304916 | c.1986T>C | synonymous_variant | 0.23 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304928 | c.1998T>C | synonymous_variant | 0.22 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304937 | c.2007G>C | synonymous_variant | 0.21 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304958 | c.2028T>G | synonymous_variant | 0.2 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304983 | c.2053C>T | synonymous_variant | 0.16 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304995 | p.Leu689Met | missense_variant | 0.15 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
sigE | 1365072 | c.660G>T | synonymous_variant | 0.94 | pyrazinamide | Not assoc w R - Interim |
rrs | 1471659 | n.-187C>T | upstream_gene_variant | 1.0 | kanamycin | |
capreomycin | ||||||
streptomycin | ||||||
amikacin | ||||||
rrl | 1473832 | n.175C>T | non_coding_transcript_exon_variant | 0.18 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1473877 | n.220G>A | non_coding_transcript_exon_variant | 0.18 | capreomycin | |
linezolid | ||||||
rrl | 1473898 | n.241C>T | non_coding_transcript_exon_variant | 0.2 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1473945 | n.288T>A | non_coding_transcript_exon_variant | 0.15 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1473946 | n.289A>T | non_coding_transcript_exon_variant | 0.15 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1473986 | n.329T>C | non_coding_transcript_exon_variant | 0.17 | capreomycin | |
linezolid | ||||||
rrl | 1473987 | n.330G>A | non_coding_transcript_exon_variant | 0.17 | capreomycin | |
linezolid | ||||||
rrl | 1473995 | n.338G>T | non_coding_transcript_exon_variant | 0.2 | capreomycin | |
linezolid | ||||||
rrl | 1474001 | n.344C>T | non_coding_transcript_exon_variant | 0.19 | capreomycin | Not assoc w R |
linezolid | Not assoc w R | |||||
rrl | 1474009 | n.352A>G | non_coding_transcript_exon_variant | 0.16 | capreomycin | |
linezolid | ||||||
rrl | 1474012 | n.355C>T | non_coding_transcript_exon_variant | 0.15 | capreomycin | |
linezolid | ||||||
rrl | 1474093 | n.436G>T | non_coding_transcript_exon_variant | 0.17 | capreomycin | |
linezolid | ||||||
rrl | 1474099 | n.442G>A | non_coding_transcript_exon_variant | 0.15 | capreomycin | |
linezolid | ||||||
rrl | 1474103 | n.446A>T | non_coding_transcript_exon_variant | 0.15 | capreomycin | |
linezolid | ||||||
rrl | 1474140 | n.483C>T | non_coding_transcript_exon_variant | 0.18 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474151 | n.494C>T | non_coding_transcript_exon_variant | 0.19 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474181 | n.524C>T | non_coding_transcript_exon_variant | 0.16 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1474362 | n.705A>G | non_coding_transcript_exon_variant | 0.17 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474376 | n.719T>C | non_coding_transcript_exon_variant | 0.18 | capreomycin | |
linezolid | ||||||
rrl | 1474639 | n.982G>A | non_coding_transcript_exon_variant | 0.17 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474794 | n.1137C>T | non_coding_transcript_exon_variant | 0.2 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474812 | n.1155G>A | non_coding_transcript_exon_variant | 0.19 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474823 | n.1166C>T | non_coding_transcript_exon_variant | 0.19 | capreomycin | |
linezolid | ||||||
rrl | 1474831 | n.1174A>G | non_coding_transcript_exon_variant | 0.18 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1474904 | n.1247G>A | non_coding_transcript_exon_variant | 0.21 | capreomycin | |
linezolid | ||||||
rrl | 1474956 | n.1299C>T | non_coding_transcript_exon_variant | 0.19 | capreomycin | |
linezolid | ||||||
rrl | 1474960 | n.1303C>G | non_coding_transcript_exon_variant | 0.18 | capreomycin | |
linezolid | ||||||
rrl | 1474963 | n.1306G>T | non_coding_transcript_exon_variant | 0.18 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1474964 | n.1307T>A | non_coding_transcript_exon_variant | 0.19 | capreomycin | |
linezolid | ||||||
rrl | 1474965 | n.1308G>C | non_coding_transcript_exon_variant | 0.19 | capreomycin | |
linezolid | ||||||
rrl | 1474970 | n.1313G>A | non_coding_transcript_exon_variant | 0.2 | capreomycin | |
linezolid | ||||||
rrl | 1475006 | n.1349A>T | non_coding_transcript_exon_variant | 0.24 | capreomycin | |
linezolid | ||||||
rrl | 1475061 | n.1404C>T | non_coding_transcript_exon_variant | 0.21 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475088 | n.1431A>T | non_coding_transcript_exon_variant | 0.23 | capreomycin | |
linezolid | ||||||
rrl | 1475199 | n.1542G>A | non_coding_transcript_exon_variant | 0.18 | capreomycin | |
linezolid | ||||||
rrl | 1475206 | n.1549C>T | non_coding_transcript_exon_variant | 0.18 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475209 | n.1552G>C | non_coding_transcript_exon_variant | 0.18 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475213 | n.1556C>T | non_coding_transcript_exon_variant | 0.18 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475249 | n.1592T>C | non_coding_transcript_exon_variant | 0.2 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475252 | n.1595C>T | non_coding_transcript_exon_variant | 0.19 | capreomycin | |
linezolid | ||||||
rrl | 1475266 | n.1609T>C | non_coding_transcript_exon_variant | 0.19 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475267 | n.1610G>A | non_coding_transcript_exon_variant | 0.18 | capreomycin | |
linezolid | ||||||
rrl | 1475275 | n.1618C>T | non_coding_transcript_exon_variant | 0.17 | capreomycin | |
linezolid | ||||||
rrl | 1475276 | n.1619T>C | non_coding_transcript_exon_variant | 0.17 | capreomycin | |
linezolid | ||||||
rrl | 1475291 | n.1634A>C | non_coding_transcript_exon_variant | 0.21 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475313 | n.1656G>A | non_coding_transcript_exon_variant | 0.21 | capreomycin | |
linezolid | ||||||
rrl | 1475315 | n.1658A>T | non_coding_transcript_exon_variant | 0.22 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475355 | n.1698C>T | non_coding_transcript_exon_variant | 0.19 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475369 | n.1712G>T | non_coding_transcript_exon_variant | 0.2 | capreomycin | |
linezolid | ||||||
rrl | 1475402 | n.1745C>T | non_coding_transcript_exon_variant | 0.18 | capreomycin | |
linezolid | ||||||
rrl | 1475419 | n.1762C>T | non_coding_transcript_exon_variant | 0.19 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475436 | n.1779C>T | non_coding_transcript_exon_variant | 0.18 | capreomycin | |
linezolid | ||||||
rrl | 1475483 | n.1826C>T | non_coding_transcript_exon_variant | 0.2 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475505 | n.1848G>A | non_coding_transcript_exon_variant | 0.2 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475526 | n.1869C>A | non_coding_transcript_exon_variant | 0.19 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475881 | n.2224T>C | non_coding_transcript_exon_variant | 0.17 | capreomycin | |
linezolid | ||||||
rrl | 1476224 | n.2567A>G | non_coding_transcript_exon_variant | 0.17 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476281 | n.2624T>C | non_coding_transcript_exon_variant | 0.17 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476583 | n.2926G>A | non_coding_transcript_exon_variant | 0.16 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476584 | n.2927C>T | non_coding_transcript_exon_variant | 0.16 | capreomycin | Not assoc w R |
linezolid | Uncertain significance | |||||
rrl | 1476597 | n.2940G>A | non_coding_transcript_exon_variant | 0.15 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476603 | n.2946G>A | non_coding_transcript_exon_variant | 0.15 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
inhA | 1673710 | c.-492C>A | upstream_gene_variant | 0.15 | isoniazid | |
ethionamide | ||||||
inhA | 1673716 | c.-486G>A | upstream_gene_variant | 0.16 | isoniazid | Uncertain significance |
ethionamide | ||||||
inhA | 1673733 | c.-469G>C | upstream_gene_variant | 0.18 | isoniazid | |
ethionamide | ||||||
inhA | 1673748 | c.-454A>G | upstream_gene_variant | 0.18 | isoniazid | |
ethionamide | ||||||
inhA | 1673749 | c.-453A>C | upstream_gene_variant | 0.17 | isoniazid | |
ethionamide | ||||||
inhA | 1673758 | c.-444A>G | upstream_gene_variant | 0.17 | isoniazid | |
ethionamide | ||||||
inhA | 1674537 | c.336C>G | synonymous_variant | 0.21 | isoniazid | |
ethionamide | ||||||
inhA | 1674561 | c.360C>T | synonymous_variant | 0.2 | isoniazid | |
ethionamide | ||||||
inhA | 1674846 | p.Ile215Met | missense_variant | 0.16 | isoniazid | |
ethionamide | ||||||
inhA | 1674864 | c.663C>T | synonymous_variant | 0.17 | isoniazid | Not assoc w R - Interim |
ethionamide | Not assoc w R - Interim | |||||
inhA | 1674870 | c.669T>C | synonymous_variant | 0.17 | isoniazid | |
ethionamide | ||||||
inhA | 1674879 | c.678T>C | synonymous_variant | 0.18 | isoniazid | |
ethionamide | ||||||
inhA | 1674888 | c.687C>G | synonymous_variant | 0.17 | isoniazid | |
ethionamide | ||||||
inhA | 1674903 | c.702T>C | synonymous_variant | 0.16 | isoniazid | |
ethionamide | ||||||
rpsA | 1833589 | c.48A>T | synonymous_variant | 0.17 | pyrazinamide | |
rpsA | 1833595 | c.54T>C | synonymous_variant | 0.19 | pyrazinamide | |
rpsA | 1833661 | c.120A>G | synonymous_variant | 0.23 | pyrazinamide | |
rpsA | 1833667 | c.126C>G | synonymous_variant | 0.22 | pyrazinamide | |
rpsA | 1833721 | c.180A>G | synonymous_variant | 0.26 | pyrazinamide | |
rpsA | 1833724 | c.183C>G | synonymous_variant | 0.26 | pyrazinamide | |
rpsA | 1833727 | c.186G>C | synonymous_variant | 0.27 | pyrazinamide | |
rpsA | 1833742 | c.201A>G | synonymous_variant | 0.28 | pyrazinamide | |
rpsA | 1833745 | c.204G>C | synonymous_variant | 0.28 | pyrazinamide | |
rpsA | 1833748 | c.207C>G | synonymous_variant | 0.28 | pyrazinamide | |
rpsA | 1833787 | c.246C>G | synonymous_variant | 0.31 | pyrazinamide | |
rpsA | 1833790 | c.249T>C | synonymous_variant | 0.3 | pyrazinamide | |
rpsA | 1833802 | c.261A>G | synonymous_variant | 0.31 | pyrazinamide | |
rpsA | 1833811 | c.270G>T | synonymous_variant | 0.31 | pyrazinamide | |
rpsA | 1833838 | c.297G>C | synonymous_variant | 0.29 | pyrazinamide | |
rpsA | 1833841 | c.300C>G | synonymous_variant | 0.29 | pyrazinamide | |
rpsA | 1833847 | c.306C>G | synonymous_variant | 0.32 | pyrazinamide | |
rpsA | 1833856 | c.315A>G | synonymous_variant | 0.32 | pyrazinamide | |
rpsA | 1833874 | c.333T>C | synonymous_variant | 0.29 | pyrazinamide | |
rpsA | 1833928 | c.387G>C | synonymous_variant | 0.25 | pyrazinamide | |
rpsA | 1833940 | c.399C>G | synonymous_variant | 0.24 | pyrazinamide | |
rpsA | 1833971 | c.430C>T | synonymous_variant | 0.22 | pyrazinamide | |
rpsA | 1833979 | c.438T>C | synonymous_variant | 0.22 | pyrazinamide | |
rpsA | 1834000 | c.459G>C | synonymous_variant | 0.22 | pyrazinamide | |
rpsA | 1834021 | c.480C>T | synonymous_variant | 0.23 | pyrazinamide | |
rpsA | 1834030 | c.489C>G | synonymous_variant | 0.24 | pyrazinamide | |
rpsA | 1834096 | c.555G>C | synonymous_variant | 0.18 | pyrazinamide | |
rpsA | 1834099 | c.558C>G | synonymous_variant | 0.17 | pyrazinamide | |
rpsA | 1834102 | c.561T>C | synonymous_variant | 0.18 | pyrazinamide | |
rpsA | 1834105 | c.564C>G | synonymous_variant | 0.17 | pyrazinamide | |
rpsA | 1834108 | c.567C>G | synonymous_variant | 0.17 | pyrazinamide | |
rpsA | 1834123 | c.582C>G | synonymous_variant | 0.19 | pyrazinamide | |
rpsA | 1834153 | c.612T>C | synonymous_variant | 0.16 | pyrazinamide | |
rpsA | 1834154 | p.Asn205His | missense_variant | 0.16 | pyrazinamide | |
rpsA | 1834169 | p.Thr210Ala | missense_variant | 0.17 | pyrazinamide | Uncertain significance |
rpsA | 1834177 | c.636A>C | synonymous_variant | 0.17 | pyrazinamide | Not assoc w R - Interim |
rpsA | 1834189 | c.648G>C | synonymous_variant | 0.21 | pyrazinamide | |
rpsA | 1834195 | c.654G>C | synonymous_variant | 0.22 | pyrazinamide | |
rpsA | 1834210 | c.669C>T | synonymous_variant | 0.2 | pyrazinamide | |
rpsA | 1834222 | c.681T>C | synonymous_variant | 0.18 | pyrazinamide | |
rpsA | 1834231 | c.690T>C | synonymous_variant | 0.19 | pyrazinamide | |
rpsA | 1834234 | c.693G>C | synonymous_variant | 0.18 | pyrazinamide | |
rpsA | 1834249 | c.708T>C | synonymous_variant | 0.22 | pyrazinamide | |
rpsA | 1834261 | c.720A>G | synonymous_variant | 0.19 | pyrazinamide | Not assoc w R - Interim |
rpsA | 1834262 | c.721_723delTCGinsAGC | synonymous_variant | 0.18 | pyrazinamide | |
rpsA | 1834303 | c.762T>C | synonymous_variant | 0.27 | pyrazinamide | |
rpsA | 1834306 | c.765T>C | synonymous_variant | 0.27 | pyrazinamide | |
rpsA | 1834333 | c.792C>T | synonymous_variant | 0.3 | pyrazinamide | |
rpsA | 1834348 | c.807T>C | synonymous_variant | 0.3 | pyrazinamide | Not assoc w R - Interim |
rpsA | 1834366 | c.825A>G | synonymous_variant | 0.27 | pyrazinamide | Not assoc w R - Interim |
rpsA | 1834396 | c.855G>C | synonymous_variant | 0.29 | pyrazinamide | |
rpsA | 1834411 | c.870T>C | synonymous_variant | 0.31 | pyrazinamide | |
rpsA | 1834417 | c.876G>C | synonymous_variant | 0.3 | pyrazinamide | |
rpsA | 1834423 | c.882G>C | synonymous_variant | 0.3 | pyrazinamide | |
rpsA | 1834435 | c.894G>C | synonymous_variant | 0.31 | pyrazinamide | |
rpsA | 1834451 | c.910T>C | synonymous_variant | 0.29 | pyrazinamide | |
rpsA | 1834465 | c.924T>C | synonymous_variant | 0.32 | pyrazinamide | |
rpsA | 1834468 | c.927A>G | synonymous_variant | 0.31 | pyrazinamide | |
rpsA | 1834489 | c.948T>C | synonymous_variant | 0.29 | pyrazinamide | |
rpsA | 1834513 | c.972C>G | synonymous_variant | 0.29 | pyrazinamide | |
rpsA | 1834528 | c.987T>C | synonymous_variant | 0.27 | pyrazinamide | |
rpsA | 1834540 | c.999G>C | synonymous_variant | 0.28 | pyrazinamide | |
rpsA | 1834546 | c.1005T>C | synonymous_variant | 0.29 | pyrazinamide | |
rpsA | 1834555 | c.1014T>G | synonymous_variant | 0.3 | pyrazinamide | |
rpsA | 1834606 | c.1065C>G | synonymous_variant | 0.27 | pyrazinamide | |
rpsA | 1834609 | c.1068T>C | synonymous_variant | 0.27 | pyrazinamide | |
rpsA | 1834633 | c.1092A>G | synonymous_variant | 0.24 | pyrazinamide | |
rpsA | 1834639 | c.1098T>C | synonymous_variant | 0.24 | pyrazinamide | |
rpsA | 1834654 | p.Glu371Asp | missense_variant | 0.21 | pyrazinamide | |
tsnR | 1853361 | c.-245T>C | upstream_gene_variant | 0.19 | linezolid | |
tsnR | 1853370 | c.-236_-234delGCAinsTCG | upstream_gene_variant | 0.19 | linezolid | |
tsnR | 1853387 | c.-219T>G | upstream_gene_variant | 0.19 | linezolid | |
tsnR | 1853394 | c.-212_-211delCTinsGC | upstream_gene_variant | 0.18 | linezolid | |
tsnR | 1854300 | p.Leu232Pro | missense_variant | 1.0 | linezolid | Not assoc w R |
tlyA | 1917972 | c.33A>G | synonymous_variant | 1.0 | capreomycin | Not assoc w R |
ndh | 2101838 | p.Ala402Val | missense_variant | 0.16 | isoniazid | Uncertain significance |
delamanid | ||||||
ethionamide | Uncertain significance | |||||
ndh | 2101873 | p.Phe390Leu | missense_variant | 0.16 | isoniazid | |
delamanid | ||||||
ethionamide | ||||||
ndh | 2101885 | c.1158G>A | synonymous_variant | 0.16 | isoniazid | |
delamanid | ||||||
ethionamide | ||||||
ndh | 2101920 | c.1123A>C | synonymous_variant | 0.17 | isoniazid | |
delamanid | ||||||
ethionamide | ||||||
ndh | 2101924 | c.1119T>G | synonymous_variant | 0.17 | isoniazid | |
delamanid | ||||||
ethionamide | ||||||
ndh | 2101939 | c.1104A>G | synonymous_variant | 0.17 | isoniazid | |
delamanid | ||||||
ethionamide | ||||||
Rv1979c | 2223293 | c.-129A>G | upstream_gene_variant | 1.0 | bedaquiline | Not assoc w R - Interim |
clofazimine | Not assoc w R | |||||
kasA | 2517950 | c.-165C>G | upstream_gene_variant | 0.25 | isoniazid | |
kasA | 2517989 | c.-126T>C | upstream_gene_variant | 0.21 | isoniazid | |
kasA | 2517993 | c.-122G>T | upstream_gene_variant | 0.22 | isoniazid | |
kasA | 2518019 | c.-96A>G | upstream_gene_variant | 0.17 | isoniazid | |
kasA | 2518076 | c.-39C>T | upstream_gene_variant | 1.0 | isoniazid | |
kasA | 2518624 | c.510C>G | synonymous_variant | 0.18 | isoniazid | |
kasA | 2518639 | c.525G>C | synonymous_variant | 0.2 | isoniazid | |
kasA | 2518657 | c.543G>C | synonymous_variant | 0.22 | isoniazid | |
kasA | 2518672 | c.558G>C | synonymous_variant | 0.27 | isoniazid | |
kasA | 2518678 | c.564C>T | synonymous_variant | 0.24 | isoniazid | |
kasA | 2518684 | c.570C>G | synonymous_variant | 0.25 | isoniazid | |
kasA | 2518693 | c.579C>G | synonymous_variant | 0.24 | isoniazid | |
kasA | 2518696 | c.582C>G | synonymous_variant | 0.24 | isoniazid | |
kasA | 2518702 | c.588C>T | synonymous_variant | 0.26 | isoniazid | |
kasA | 2518705 | c.591T>C | synonymous_variant | 0.26 | isoniazid | |
kasA | 2518711 | c.597A>G | synonymous_variant | 0.25 | isoniazid | |
kasA | 2518714 | c.600A>C | synonymous_variant | 0.24 | isoniazid | |
kasA | 2518732 | c.618C>G | synonymous_variant | 0.23 | isoniazid | |
kasA | 2518744 | c.630C>T | synonymous_variant | 0.22 | isoniazid | |
kasA | 2518747 | c.633C>G | synonymous_variant | 0.21 | isoniazid | |
kasA | 2518768 | c.654C>T | synonymous_variant | 0.23 | isoniazid | |
kasA | 2518777 | c.663C>T | synonymous_variant | 0.23 | isoniazid | |
kasA | 2518783 | c.669T>C | synonymous_variant | 0.22 | isoniazid | |
kasA | 2518789 | c.675G>C | synonymous_variant | 0.21 | isoniazid | |
kasA | 2518792 | c.678C>A | synonymous_variant | 0.21 | isoniazid | |
kasA | 2518795 | c.681C>G | synonymous_variant | 0.21 | isoniazid | |
kasA | 2518819 | c.705C>T | synonymous_variant | 0.22 | isoniazid | |
kasA | 2518825 | c.711T>C | synonymous_variant | 0.22 | isoniazid | |
kasA | 2518864 | c.750G>C | synonymous_variant | 0.19 | isoniazid | |
kasA | 2518910 | p.Leu266Met | missense_variant | 0.15 | isoniazid | |
kasA | 2518999 | c.885G>A | synonymous_variant | 0.14 | isoniazid | |
Rv2477c | 2782816 | c.1227T>G | synonymous_variant | 0.16 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2782822 | c.1221G>C | synonymous_variant | 0.17 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2782828 | c.1215T>C | synonymous_variant | 0.19 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | Not assoc w R - Interim | |||||
streptomycin | Not assoc w R - Interim | |||||
rifampicin | Not assoc w R - Interim | |||||
ethambutol | Not assoc w R - Interim | |||||
amikacin | ||||||
Rv2477c | 2782841 | p.Thr401Asn | missense_variant | 0.22 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2782847 | p.Arg399Lys | missense_variant | 0.21 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2782852 | c.1191T>C | synonymous_variant | 0.21 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2782861 | c.1182T>G | synonymous_variant | 0.22 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2782864 | c.1179T>C | synonymous_variant | 0.22 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2782869 | p.Ala392Thr | missense_variant | 0.23 | kanamycin | Uncertain significance |
levofloxacin | Uncertain significance | |||||
moxifloxacin | Uncertain significance | |||||
streptomycin | ||||||
rifampicin | Uncertain significance | |||||
ethambutol | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
Rv2477c | 2782876 | c.1167G>C | synonymous_variant | 0.25 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2782882 | c.1161T>C | synonymous_variant | 0.26 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2782912 | p.Ser377Thr | missense_variant | 0.31 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2782927 | p.Thr372Glu | missense_variant | 0.31 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2782936 | c.1107G>T | synonymous_variant | 0.33 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2782948 | c.1095A>G | synonymous_variant | 0.32 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2782957 | c.1086A>G | synonymous_variant | 0.31 | kanamycin | Not assoc w R - Interim |
levofloxacin | Not assoc w R - Interim | |||||
moxifloxacin | Not assoc w R - Interim | |||||
streptomycin | Not assoc w R - Interim | |||||
rifampicin | Not assoc w R - Interim | |||||
ethambutol | Not assoc w R - Interim | |||||
amikacin | Not assoc w R - Interim | |||||
Rv2477c | 2782966 | c.1077C>A | synonymous_variant | 0.29 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2782969 | c.1074A>C | synonymous_variant | 0.29 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2782972 | c.1071G>C | synonymous_variant | 0.29 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2782981 | c.1062G>C | synonymous_variant | 0.29 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2782984 | c.1059T>C | synonymous_variant | 0.29 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2782990 | c.1053C>G | synonymous_variant | 0.3 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783002 | c.1041T>C | synonymous_variant | 0.29 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783008 | c.1035C>G | synonymous_variant | 0.3 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783013 | c.1030T>C | synonymous_variant | 0.28 | kanamycin | Not assoc w R - Interim |
levofloxacin | Not assoc w R - Interim | |||||
moxifloxacin | Not assoc w R - Interim | |||||
streptomycin | Not assoc w R - Interim | |||||
rifampicin | Not assoc w R - Interim | |||||
ethambutol | Not assoc w R - Interim | |||||
amikacin | Not assoc w R - Interim | |||||
Rv2477c | 2783015 | p.Ser343Thr | missense_variant | 0.3 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783035 | c.1008G>C | synonymous_variant | 0.32 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783040 | p.Ala335Thr | missense_variant | 0.34 | kanamycin | Uncertain significance |
levofloxacin | Uncertain significance | |||||
moxifloxacin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
rifampicin | Uncertain significance | |||||
ethambutol | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
Rv2477c | 2783044 | c.999G>C | synonymous_variant | 0.34 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783048 | p.Asp332Gly | missense_variant | 0.32 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783059 | c.984T>C | synonymous_variant | 0.31 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783068 | p.Asp325Glu | missense_variant | 0.3 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783077 | c.966T>C | synonymous_variant | 0.31 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783092 | c.951A>G | synonymous_variant | 0.24 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | Not assoc w R - Interim | |||||
ethambutol | Not assoc w R - Interim | |||||
amikacin | ||||||
Rv2477c | 2783095 | c.948C>G | synonymous_variant | 0.24 | kanamycin | Not assoc w R - Interim |
levofloxacin | Not assoc w R - Interim | |||||
moxifloxacin | Not assoc w R - Interim | |||||
streptomycin | Not assoc w R - Interim | |||||
rifampicin | Not assoc w R | |||||
ethambutol | Not assoc w R - Interim | |||||
amikacin | Not assoc w R - Interim | |||||
Rv2477c | 2783098 | c.945C>G | synonymous_variant | 0.24 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783101 | c.942G>T | synonymous_variant | 0.24 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783116 | c.927T>C | synonymous_variant | 0.23 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783140 | c.903C>G | synonymous_variant | 0.25 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783149 | c.894G>C | synonymous_variant | 0.26 | kanamycin | Not assoc w R - Interim |
levofloxacin | Not assoc w R - Interim | |||||
moxifloxacin | Not assoc w R - Interim | |||||
streptomycin | ||||||
rifampicin | Not assoc w R - Interim | |||||
ethambutol | ||||||
amikacin | Not assoc w R - Interim | |||||
Rv2477c | 2783158 | c.885A>C | synonymous_variant | 0.26 | kanamycin | Not assoc w R - Interim |
levofloxacin | Not assoc w R - Interim | |||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | Not assoc w R - Interim | |||||
ethambutol | Not assoc w R - Interim | |||||
amikacin | Not assoc w R - Interim | |||||
Rv2477c | 2783179 | c.864G>C | synonymous_variant | 0.25 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783182 | c.861C>G | synonymous_variant | 0.24 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783185 | c.858G>A | synonymous_variant | 0.24 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783194 | c.849A>G | synonymous_variant | 0.25 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783221 | c.822G>C | synonymous_variant | 0.22 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783224 | c.819C>G | synonymous_variant | 0.22 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783230 | c.813T>G | synonymous_variant | 0.22 | kanamycin | |
levofloxacin | Not assoc w R - Interim | |||||
moxifloxacin | Not assoc w R - Interim | |||||
streptomycin | Not assoc w R - Interim | |||||
rifampicin | Not assoc w R - Interim | |||||
ethambutol | Not assoc w R - Interim | |||||
amikacin | ||||||
Rv2477c | 2783235 | c.808T>C | synonymous_variant | 0.2 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783254 | c.789A>G | synonymous_variant | 0.21 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783263 | c.780G>C | synonymous_variant | 0.22 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783275 | c.768C>G | synonymous_variant | 0.19 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783278 | c.765A>G | synonymous_variant | 0.19 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783293 | c.750G>A | synonymous_variant | 0.2 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783299 | c.744A>G | synonymous_variant | 0.19 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783302 | c.741A>G | synonymous_variant | 0.19 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783317 | c.726G>C | synonymous_variant | 0.18 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783350 | c.693T>C | synonymous_variant | 0.19 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783353 | c.690T>C | synonymous_variant | 0.18 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783359 | c.684G>A | synonymous_variant | 0.18 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783374 | c.669G>C | synonymous_variant | 0.18 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783395 | c.648T>G | synonymous_variant | 0.16 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783401 | c.642C>T | synonymous_variant | 0.15 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783512 | c.531A>G | synonymous_variant | 0.16 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783521 | c.522G>C | synonymous_variant | 0.17 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783527 | c.516A>G | synonymous_variant | 0.19 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783539 | c.504G>C | synonymous_variant | 0.18 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783542 | c.501G>C | synonymous_variant | 0.21 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783548 | c.495T>C | synonymous_variant | 0.21 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783554 | c.489C>T | synonymous_variant | 0.21 | kanamycin | Not assoc w R - Interim |
levofloxacin | Not assoc w R - Interim | |||||
moxifloxacin | Not assoc w R - Interim | |||||
streptomycin | ||||||
rifampicin | Not assoc w R - Interim | |||||
ethambutol | Not assoc w R - Interim | |||||
amikacin | Not assoc w R - Interim | |||||
Rv2477c | 2783557 | c.486T>C | synonymous_variant | 0.22 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783563 | c.480A>G | synonymous_variant | 0.25 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783572 | c.471A>G | synonymous_variant | 0.26 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783586 | p.Ala153Pro | missense_variant | 0.25 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783593 | c.450T>C | synonymous_variant | 0.26 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783605 | c.438T>C | synonymous_variant | 0.27 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783620 | c.423C>G | synonymous_variant | 0.3 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783628 | p.Ala139Ser | missense_variant | 0.29 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783656 | c.387G>C | synonymous_variant | 0.3 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783665 | c.378A>G | synonymous_variant | 0.32 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783674 | c.369T>C | synonymous_variant | 0.33 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783683 | c.360A>G | synonymous_variant | 0.32 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783700 | p.Thr115Ser | missense_variant | 0.31 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783718 | c.325T>C | synonymous_variant | 0.32 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783719 | c.324A>G | synonymous_variant | 0.32 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783751 | p.Ile98Val | missense_variant | 0.3 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783758 | p.Asp95Glu | missense_variant | 0.29 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783761 | c.282G>C | synonymous_variant | 0.27 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783766 | p.Met93Leu | missense_variant | 0.26 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783776 | c.267G>C | synonymous_variant | 0.24 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783779 | c.264T>C | synonymous_variant | 0.23 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783797 | p.Asp82Glu | missense_variant | 0.21 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783815 | c.228A>G | synonymous_variant | 0.21 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783821 | p.Gln74Leu | missense_variant | 0.19 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783833 | c.210G>C | synonymous_variant | 0.21 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783839 | c.204C>G | synonymous_variant | 0.21 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783843 | p.Gly67Asp | missense_variant | 0.22 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783846 | p.Thr66Asn | missense_variant | 0.22 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783860 | c.183T>C | synonymous_variant | 0.22 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783863 | c.180C>T | synonymous_variant | 0.21 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2477c | 2783932 | c.111C>T | synonymous_variant | 0.15 | kanamycin | |
levofloxacin | ||||||
moxifloxacin | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
amikacin | ||||||
Rv2680 | 2996085 | c.-20G>A | upstream_gene_variant | 0.49 | capreomycin | Uncertain significance |
Rv2752c | 3065040 | c.1152C>G | synonymous_variant | 0.18 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | Not assoc w R - Interim | |||||
rifampicin | Not assoc w R - Interim | |||||
ethambutol | Not assoc w R - Interim | |||||
Rv2752c | 3065196 | c.996T>C | synonymous_variant | 0.15 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
rifampicin | ||||||
ethambutol | ||||||
Rv2752c | 3065202 | c.990T>G | synonymous_variant | 0.16 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
rifampicin | ||||||
ethambutol | ||||||
Rv2752c | 3065205 | c.987T>C | synonymous_variant | 0.16 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
rifampicin | ||||||
ethambutol | ||||||
Rv2752c | 3065223 | c.969T>C | synonymous_variant | 0.16 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
rifampicin | ||||||
ethambutol | ||||||
Rv2752c | 3065232 | c.960T>C | synonymous_variant | 0.15 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
rifampicin | ||||||
ethambutol | ||||||
Rv2752c | 3065241 | c.951A>G | synonymous_variant | 0.15 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
rifampicin | ||||||
ethambutol | ||||||
Rv2752c | 3066810 | c.-619G>A | upstream_gene_variant | 0.14 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
rifampicin | ||||||
ethambutol | ||||||
thyX | 3067325 | c.621A>G | synonymous_variant | 0.17 | para-aminosalicylic_acid | |
thyX | 3067349 | c.597G>C | synonymous_variant | 0.21 | para-aminosalicylic_acid | |
thyX | 3067355 | c.591A>C | synonymous_variant | 0.21 | para-aminosalicylic_acid | |
thyX | 3067367 | c.579G>C | synonymous_variant | 0.26 | para-aminosalicylic_acid | |
thyX | 3067373 | c.573C>G | synonymous_variant | 0.26 | para-aminosalicylic_acid | |
thyX | 3067391 | c.555G>C | synonymous_variant | 0.25 | para-aminosalicylic_acid | |
thyX | 3067394 | c.552G>C | synonymous_variant | 0.26 | para-aminosalicylic_acid | |
thyX | 3067439 | c.507A>G | synonymous_variant | 0.26 | para-aminosalicylic_acid | |
thyX | 3067445 | c.501C>G | synonymous_variant | 0.26 | para-aminosalicylic_acid | |
thyX | 3067457 | c.489C>G | synonymous_variant | 0.27 | para-aminosalicylic_acid | |
thyX | 3067465 | p.Ile161Val | missense_variant | 0.27 | para-aminosalicylic_acid | |
thyX | 3067475 | c.471A>G | synonymous_variant | 0.23 | para-aminosalicylic_acid | |
thyX | 3067490 | c.456C>G | synonymous_variant | 0.23 | para-aminosalicylic_acid | |
thyX | 3067493 | c.453A>G | synonymous_variant | 0.23 | para-aminosalicylic_acid | |
thyX | 3067515 | p.Ser144Thr | missense_variant | 0.25 | para-aminosalicylic_acid | |
thyX | 3067530 | p.Ala139Ser | missense_variant | 0.26 | para-aminosalicylic_acid | |
thyX | 3067545 | p.Glu134Ala | missense_variant | 0.25 | para-aminosalicylic_acid | |
thyX | 3067549 | p.Thr133Ala | missense_variant | 0.24 | para-aminosalicylic_acid | |
thyX | 3067556 | p.His130Gln | missense_variant | 0.26 | para-aminosalicylic_acid | |
thyX | 3067559 | c.387C>G | synonymous_variant | 0.26 | para-aminosalicylic_acid | |
thyX | 3067565 | p.Asp127Glu | missense_variant | 0.26 | para-aminosalicylic_acid | |
thyX | 3067570 | p.Ala126Pro | missense_variant | 0.26 | para-aminosalicylic_acid | |
thyX | 3067577 | c.369G>A | synonymous_variant | 0.29 | para-aminosalicylic_acid | |
thyX | 3067601 | p.Arg115His | missense_variant | 0.26 | para-aminosalicylic_acid | |
thyX | 3067611 | p.Lys112Thr | missense_variant | 0.25 | para-aminosalicylic_acid | |
thyX | 3067619 | c.327A>C | synonymous_variant | 0.23 | para-aminosalicylic_acid | |
thyX | 3067631 | c.315C>G | synonymous_variant | 0.24 | para-aminosalicylic_acid | |
thyX | 3067634 | c.312C>G | synonymous_variant | 0.24 | para-aminosalicylic_acid | |
thyX | 3067652 | c.294T>C | synonymous_variant | 0.24 | para-aminosalicylic_acid | |
thyX | 3067661 | c.285C>G | synonymous_variant | 0.22 | para-aminosalicylic_acid | |
thyX | 3067685 | c.261A>C | synonymous_variant | 0.19 | para-aminosalicylic_acid | |
thyX | 3067691 | p.Ile85Leu | missense_variant | 0.18 | para-aminosalicylic_acid | |
thyX | 3067694 | c.252G>C | synonymous_variant | 0.18 | para-aminosalicylic_acid | |
thyA | 3073872 | p.Ile200Met | missense_variant | 0.16 | para-aminosalicylic_acid | |
thyA | 3073892 | c.580T>C | synonymous_variant | 0.17 | para-aminosalicylic_acid | |
thyA | 3073898 | p.Ala192Ser | missense_variant | 0.17 | para-aminosalicylic_acid | |
thyA | 3073917 | c.555C>G | synonymous_variant | 0.16 | para-aminosalicylic_acid | |
thyA | 3073920 | c.552C>G | synonymous_variant | 0.17 | para-aminosalicylic_acid | |
thyA | 3073977 | c.495A>G | synonymous_variant | 0.19 | para-aminosalicylic_acid | |
thyA | 3073989 | c.483T>C | synonymous_variant | 0.18 | para-aminosalicylic_acid | |
thyA | 3074004 | c.468T>C | synonymous_variant | 0.2 | para-aminosalicylic_acid | |
thyA | 3074010 | c.462C>G | synonymous_variant | 0.21 | para-aminosalicylic_acid | |
thyA | 3074028 | c.444G>C | synonymous_variant | 0.2 | para-aminosalicylic_acid | |
thyA | 3074031 | c.441T>C | synonymous_variant | 0.19 | para-aminosalicylic_acid | |
thyA | 3074034 | c.438T>C | synonymous_variant | 0.19 | para-aminosalicylic_acid | |
thyA | 3074037 | c.435C>G | synonymous_variant | 0.19 | para-aminosalicylic_acid | |
thyA | 3074053 | p.Arg140Gln | missense_variant | 0.19 | para-aminosalicylic_acid | |
thyA | 3074055 | p.Glu139Pro | missense_variant | 0.18 | para-aminosalicylic_acid | |
thyA | 3074061 | c.411A>G | synonymous_variant | 0.18 | para-aminosalicylic_acid | |
thyA | 3074079 | c.393G>C | synonymous_variant | 0.17 | para-aminosalicylic_acid | |
thyA | 3074097 | c.375C>A | synonymous_variant | 0.16 | para-aminosalicylic_acid | |
thyA | 3074102 | p.Asp124Asn | missense_variant | 0.16 | para-aminosalicylic_acid | |
thyA | 3074106 | c.366T>C | synonymous_variant | 0.16 | para-aminosalicylic_acid | |
thyA | 3074127 | c.345G>C | synonymous_variant | 0.16 | para-aminosalicylic_acid | |
ald | 3086788 | c.-32T>C | upstream_gene_variant | 1.0 | cycloserine | |
mtrB | 3625065 | p.Met517Leu | missense_variant | 1.0 | rifampicin | Not assoc w R |
bedaquiline | Uncertain significance | |||||
mtrB | 3625636 | c.978C>G | synonymous_variant | 0.18 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrB | 3625656 | c.958T>C | synonymous_variant | 0.24 | rifampicin | Not assoc w R - Interim |
bedaquiline | Not assoc w R - Interim | |||||
lpqB | 3625663 | c.-753G>C | upstream_gene_variant | 0.25 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625669 | c.-759G>C | upstream_gene_variant | 0.26 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625687 | c.-777G>C | upstream_gene_variant | 0.3 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625690 | c.-780T>C | upstream_gene_variant | 0.31 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625696 | c.-786A>G | upstream_gene_variant | 0.32 | rifampicin | |
bedaquiline | ||||||
mtrB | 3625705 | c.909C>G | synonymous_variant | 0.33 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrB | 3625711 | c.903C>T | synonymous_variant | 0.34 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
lpqB | 3625714 | c.-804C>T | upstream_gene_variant | 0.34 | rifampicin | |
bedaquiline | ||||||
mtrB | 3625720 | c.894G>C | synonymous_variant | 0.33 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrB | 3625729 | c.885A>G | synonymous_variant | 0.31 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
lpqB | 3625735 | c.-825C>T | upstream_gene_variant | 0.31 | rifampicin | |
bedaquiline | ||||||
lpqB | 3625749 | c.-839C>T | upstream_gene_variant | 0.27 | rifampicin | |
bedaquiline | ||||||
mtrB | 3625750 | c.864G>A | synonymous_variant | 0.27 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrB | 3625755 | p.Ala287Thr | missense_variant | 0.27 | rifampicin | Uncertain significance |
bedaquiline | ||||||
mtrB | 3625765 | c.849C>G | synonymous_variant | 0.26 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrB | 3625774 | c.840G>A | synonymous_variant | 0.26 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrB | 3625797 | p.Val273Met | missense_variant | 0.27 | rifampicin | Uncertain significance |
bedaquiline | Uncertain significance | |||||
mtrB | 3625806 | c.808A>C | synonymous_variant | 0.25 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrB | 3625807 | c.807C>G | synonymous_variant | 0.25 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrB | 3625837 | c.777C>G | synonymous_variant | 0.22 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
lpqB | 3625849 | c.-939T>C | upstream_gene_variant | 0.21 | rifampicin | |
bedaquiline | ||||||
mtrB | 3625852 | c.762A>G | synonymous_variant | 0.19 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
lpqB | 3625864 | c.-954T>G | upstream_gene_variant | 0.2 | rifampicin | |
bedaquiline | ||||||
mtrB | 3625876 | c.738G>C | synonymous_variant | 0.19 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
lpqB | 3625909 | c.-999T>G | upstream_gene_variant | 0.16 | rifampicin | |
bedaquiline | ||||||
mtrA | 3626774 | p.Arg192Ser | missense_variant | 0.16 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626783 | c.-170C>G | upstream_gene_variant | 0.16 | rifampicin | |
bedaquiline | ||||||
mtrA | 3626786 | c.564A>G | synonymous_variant | 0.17 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrA | 3626792 | c.558G>T | synonymous_variant | 0.17 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrB | 3626795 | c.-182C>T | upstream_gene_variant | 0.17 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626798 | c.-185T>C | upstream_gene_variant | 0.18 | rifampicin | |
bedaquiline | ||||||
mtrA | 3626804 | c.546A>G | synonymous_variant | 0.19 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrB | 3626840 | c.-227C>G | upstream_gene_variant | 0.23 | rifampicin | |
bedaquiline | ||||||
mtrA | 3626846 | c.504G>A | synonymous_variant | 0.24 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrB | 3626858 | c.-245A>G | upstream_gene_variant | 0.23 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626861 | c.-248C>G | upstream_gene_variant | 0.22 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626866 | c.-253T>C | upstream_gene_variant | 0.22 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626876 | c.-263A>G | upstream_gene_variant | 0.24 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626885 | c.-272A>C | upstream_gene_variant | 0.25 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626890 | c.-277T>C | upstream_gene_variant | 0.22 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626900 | c.-287G>A | upstream_gene_variant | 0.22 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626903 | c.-290T>C | upstream_gene_variant | 0.23 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626912 | c.-299T>G | upstream_gene_variant | 0.25 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626927 | c.-314G>C | upstream_gene_variant | 0.23 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626930 | c.-317A>G | upstream_gene_variant | 0.24 | rifampicin | |
bedaquiline | ||||||
mtrA | 3626939 | c.411A>G | synonymous_variant | 0.22 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrB | 3626942 | c.-329A>C | upstream_gene_variant | 0.22 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626945 | c.-332C>T | upstream_gene_variant | 0.22 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626957 | c.-344G>C | upstream_gene_variant | 0.23 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626972 | c.-359A>G | upstream_gene_variant | 0.24 | rifampicin | |
bedaquiline | ||||||
mtrB | 3626987 | c.-374C>G | upstream_gene_variant | 0.22 | rifampicin | |
bedaquiline | ||||||
mtrB | 3627008 | c.-395G>C | upstream_gene_variant | 0.23 | rifampicin | |
bedaquiline | ||||||
mtrB | 3627011 | c.-398T>G | upstream_gene_variant | 0.24 | rifampicin | |
bedaquiline | ||||||
mtrB | 3627065 | c.-452G>C | upstream_gene_variant | 0.2 | rifampicin | |
bedaquiline | ||||||
mtrA | 3627068 | c.282T>C | synonymous_variant | 0.2 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrA | 3627071 | c.279G>T | synonymous_variant | 0.2 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrB | 3627074 | c.-461G>C | upstream_gene_variant | 0.2 | rifampicin | |
bedaquiline | ||||||
mtrA | 3627080 | c.270T>C | synonymous_variant | 0.19 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrB | 3627083 | c.-470G>C | upstream_gene_variant | 0.19 | rifampicin | |
bedaquiline | ||||||
mtrA | 3627098 | c.252A>C | synonymous_variant | 0.21 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrB | 3627104 | c.-491C>G | upstream_gene_variant | 0.2 | rifampicin | |
bedaquiline | ||||||
mtrA | 3627119 | c.231T>G | synonymous_variant | 0.2 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrB | 3627122 | c.-509T>C | upstream_gene_variant | 0.2 | rifampicin | |
bedaquiline | ||||||
mtrB | 3627167 | c.-554T>C | upstream_gene_variant | 0.21 | rifampicin | |
bedaquiline | ||||||
mtrB | 3627181 | c.-568T>C | upstream_gene_variant | 0.21 | rifampicin | |
bedaquiline | ||||||
mtrB | 3627182 | c.-569T>C | upstream_gene_variant | 0.21 | rifampicin | |
bedaquiline | ||||||
mtrA | 3627188 | c.162A>G | synonymous_variant | 0.23 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrB | 3627209 | c.-596G>A | upstream_gene_variant | 0.23 | rifampicin | |
bedaquiline | ||||||
mtrA | 3627221 | c.129C>T | synonymous_variant | 0.2 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrA | 3627227 | c.123T>C | synonymous_variant | 0.19 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrB | 3627233 | c.-620T>C | upstream_gene_variant | 0.17 | rifampicin | |
bedaquiline | ||||||
mtrB | 3627236 | c.-623T>C | upstream_gene_variant | 0.17 | rifampicin | |
bedaquiline | ||||||
mtrA | 3627242 | c.108C>T | synonymous_variant | 0.18 | rifampicin | Not assoc w R - Interim |
bedaquiline | ||||||
mtrB | 3627254 | c.-641C>T | upstream_gene_variant | 0.18 | rifampicin | |
bedaquiline | ||||||
mtrB | 3627263 | c.-650C>T | upstream_gene_variant | 0.16 | rifampicin | |
bedaquiline | ||||||
mtrB | 3627272 | c.-659G>T | upstream_gene_variant | 0.16 | rifampicin | |
bedaquiline | ||||||
mtrB | 3627275 | c.-662G>T | upstream_gene_variant | 0.15 | rifampicin | |
bedaquiline | ||||||
rpoA | 3877587 | c.921A>G | synonymous_variant | 0.18 | rifampicin | Not assoc w R - Interim |
rpoA | 3877613 | p.Ile299Val | missense_variant | 0.21 | rifampicin | |
rpoA | 3877617 | c.891G>C | synonymous_variant | 0.21 | rifampicin | |
rpoA | 3877656 | c.852T>G | synonymous_variant | 0.25 | rifampicin | Not assoc w R - Interim |
rpoA | 3877668 | c.840A>G | synonymous_variant | 0.25 | rifampicin | |
rpoA | 3877679 | p.Ala277Ser | missense_variant | 0.28 | rifampicin | |
rpoA | 3877686 | c.822A>G | synonymous_variant | 0.28 | rifampicin | Not assoc w R - Interim |
rpoA | 3877692 | c.816G>C | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoA | 3877704 | c.804G>C | synonymous_variant | 0.28 | rifampicin | |
rpoA | 3877737 | c.771G>C | synonymous_variant | 0.25 | rifampicin | |
rpoA | 3877743 | c.765T>C | synonymous_variant | 0.26 | rifampicin | Not assoc w R - Interim |
rpoA | 3877764 | c.744C>G | synonymous_variant | 0.23 | rifampicin | Not assoc w R - Interim |
rpoA | 3877770 | c.738A>G | synonymous_variant | 0.23 | rifampicin | Not assoc w R - Interim |
rpoA | 3877776 | c.732T>C | synonymous_variant | 0.25 | rifampicin | Not assoc w R - Interim |
rpoA | 3877782 | c.726T>C | synonymous_variant | 0.26 | rifampicin | Not assoc w R - Interim |
rpoA | 3877791 | c.717C>G | synonymous_variant | 0.26 | rifampicin | |
rpoA | 3877818 | c.690A>G | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoA | 3877839 | c.669G>C | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoA | 3877848 | c.660C>T | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoA | 3877857 | c.651G>A | synonymous_variant | 0.28 | rifampicin | |
rpoA | 3877866 | c.642G>C | synonymous_variant | 0.28 | rifampicin | |
rpoA | 3877875 | c.633T>G | synonymous_variant | 0.28 | rifampicin | |
rpoA | 3877878 | c.630G>C | synonymous_variant | 0.27 | rifampicin | |
rpoA | 3877890 | c.618C>T | synonymous_variant | 0.3 | rifampicin | |
rpoA | 3877896 | c.612G>C | synonymous_variant | 0.28 | rifampicin | |
rpoA | 3877900 | p.Ser203Asn | missense_variant | 0.3 | rifampicin | |
rpoA | 3877905 | c.603A>G | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoA | 3877908 | p.Asn200Ser | missense_variant | 0.29 | rifampicin | |
rpoA | 3877920 | c.588G>C | synonymous_variant | 0.28 | rifampicin | Not assoc w R - Interim |
rpoA | 3877923 | c.585C>T | synonymous_variant | 0.28 | rifampicin | Not assoc w R - Interim |
rpoA | 3877926 | c.582G>C | synonymous_variant | 0.28 | rifampicin | |
rpoA | 3877962 | c.546G>T | synonymous_variant | 0.3 | rifampicin | Not assoc w R - Interim |
rpoA | 3877986 | c.522G>C | synonymous_variant | 0.28 | rifampicin | |
rpoA | 3877989 | c.519A>G | synonymous_variant | 0.28 | rifampicin | Not assoc w R - Interim |
rpoA | 3878001 | c.507A>G | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoA | 3878022 | c.486T>C | synonymous_variant | 0.28 | rifampicin | |
rpoA | 3878028 | c.480G>C | synonymous_variant | 0.26 | rifampicin | |
rpoA | 3878031 | c.477T>C | synonymous_variant | 0.26 | rifampicin | |
rpoA | 3878040 | c.468T>C | synonymous_variant | 0.27 | rifampicin | Not assoc w R - Interim |
rpoA | 3878055 | c.453A>G | synonymous_variant | 0.29 | rifampicin | |
rpoA | 3878058 | c.450G>T | synonymous_variant | 0.27 | rifampicin | |
rpoA | 3878061 | c.447G>C | synonymous_variant | 0.26 | rifampicin | |
rpoA | 3878067 | c.441C>G | synonymous_variant | 0.26 | rifampicin | |
rpoA | 3878070 | c.438T>C | synonymous_variant | 0.26 | rifampicin | |
rpoA | 3878076 | c.432C>T | synonymous_variant | 0.27 | rifampicin | |
rpoA | 3878094 | c.414C>G | synonymous_variant | 0.28 | rifampicin | |
rpoA | 3878103 | c.405A>G | synonymous_variant | 0.27 | rifampicin | |
rpoA | 3878106 | c.402G>C | synonymous_variant | 0.28 | rifampicin | |
rpoA | 3878118 | c.390T>C | synonymous_variant | 0.28 | rifampicin | |
rpoA | 3878130 | c.378C>G | synonymous_variant | 0.29 | rifampicin | |
rpoA | 3878141 | p.Met123Leu | missense_variant | 0.25 | rifampicin | Uncertain significance |
rpoA | 3878143 | p.Gly122Asp | missense_variant | 0.25 | rifampicin | Uncertain significance |
rpoA | 3878157 | c.351C>G | synonymous_variant | 0.26 | rifampicin | |
rpoA | 3878163 | c.345C>T | synonymous_variant | 0.27 | rifampicin | Not assoc w R - Interim |
rpoA | 3878169 | c.339G>C | synonymous_variant | 0.26 | rifampicin | Not assoc w R - Interim |
rpoA | 3878172 | c.336G>C | synonymous_variant | 0.25 | rifampicin | |
rpoA | 3878187 | c.321C>G | synonymous_variant | 0.28 | rifampicin | |
rpoA | 3878193 | c.315T>C | synonymous_variant | 0.3 | rifampicin | Not assoc w R - Interim |
rpoA | 3878199 | c.309T>C | synonymous_variant | 0.3 | rifampicin | |
rpoA | 3878217 | c.291A>G | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoA | 3878226 | c.282C>G | synonymous_variant | 0.28 | rifampicin | |
rpoA | 3878232 | c.276G>C | synonymous_variant | 0.3 | rifampicin | |
rpoA | 3878247 | c.261G>C | synonymous_variant | 0.33 | rifampicin | |
rpoA | 3878250 | c.258C>G | synonymous_variant | 0.33 | rifampicin | |
rpoA | 3878271 | c.237T>C | synonymous_variant | 0.31 | rifampicin | Not assoc w R - Interim |
rpoA | 3878284 | p.Glu75Ala | missense_variant | 0.31 | rifampicin | |
rpoA | 3878292 | c.216T>C | synonymous_variant | 0.3 | rifampicin | Not assoc w R - Interim |
rpoA | 3878298 | c.210A>G | synonymous_variant | 0.32 | rifampicin | Not assoc w R - Interim |
rpoA | 3878304 | c.204G>C | synonymous_variant | 0.31 | rifampicin | |
rpoA | 3878310 | c.198G>C | synonymous_variant | 0.3 | rifampicin | |
rpoA | 3878313 | c.195G>C | synonymous_variant | 0.31 | rifampicin | Not assoc w R - Interim |
rpoA | 3878322 | c.186A>G | synonymous_variant | 0.3 | rifampicin | Not assoc w R - Interim |
rpoA | 3878331 | c.177A>G | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoA | 3878334 | c.174T>C | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoA | 3878337 | c.171T>C | synonymous_variant | 0.3 | rifampicin | Not assoc w R - Interim |
rpoA | 3878346 | c.162T>C | synonymous_variant | 0.33 | rifampicin | |
rpoA | 3878364 | c.144A>C | synonymous_variant | 0.27 | rifampicin | |
rpoA | 3878367 | c.141C>G | synonymous_variant | 0.27 | rifampicin | |
rpoA | 3878376 | c.132G>C | synonymous_variant | 0.27 | rifampicin | |
rpoA | 3878385 | c.123C>G | synonymous_variant | 0.25 | rifampicin | |
rpoA | 3878388 | c.120C>G | synonymous_variant | 0.24 | rifampicin | |
rpoA | 3878391 | c.117T>C | synonymous_variant | 0.25 | rifampicin | |
rpoA | 3878415 | c.93C>T | synonymous_variant | 0.26 | rifampicin | |
rpoA | 3878424 | c.84G>C | synonymous_variant | 0.27 | rifampicin | |
rpoA | 3878436 | c.72A>G | synonymous_variant | 0.23 | rifampicin | |
rpoA | 3878442 | c.66G>C | synonymous_variant | 0.23 | rifampicin | |
rpoA | 3878454 | c.54A>C | synonymous_variant | 0.22 | rifampicin | |
rpoA | 3878472 | p.Asp12Glu | missense_variant | 0.21 | rifampicin | |
rpoA | 3878478 | c.30C>G | synonymous_variant | 0.23 | rifampicin | |
rpoA | 3878484 | c.24C>A | synonymous_variant | 0.2 | rifampicin | |
rpoA | 3878490 | c.18C>A | synonymous_variant | 0.19 | rifampicin | |
rpoA | 3878496 | c.12A>T | synonymous_variant | 0.19 | rifampicin | |
rpoA | 3878683 | c.-176G>C | upstream_gene_variant | 0.22 | rifampicin | |
rpoA | 3878698 | c.-191A>G | upstream_gene_variant | 0.24 | rifampicin | |
rpoA | 3878713 | c.-206G>A | upstream_gene_variant | 0.2 | rifampicin | Uncertain significance |
rpoA | 3878716 | c.-209C>G | upstream_gene_variant | 0.23 | rifampicin | |
rpoA | 3878725 | c.-218A>G | upstream_gene_variant | 0.24 | rifampicin | |
rpoA | 3878736 | c.-229A>G | upstream_gene_variant | 0.22 | rifampicin | |
rpoA | 3878737 | c.-230G>C | upstream_gene_variant | 0.22 | rifampicin | |
rpoA | 3878742 | c.-235G>A | upstream_gene_variant | 0.22 | rifampicin | |
rpoA | 3878746 | c.-239A>G | upstream_gene_variant | 0.22 | rifampicin | Uncertain significance |
rpoA | 3878749 | c.-242G>T | upstream_gene_variant | 0.23 | rifampicin | |
rpoA | 3878761 | c.-254G>C | upstream_gene_variant | 0.25 | rifampicin | |
rpoA | 3878764 | c.-257A>G | upstream_gene_variant | 0.25 | rifampicin | |
rpoA | 3878785 | c.-278T>G | upstream_gene_variant | 0.25 | rifampicin | |
rpoA | 3878788 | c.-281G>C | upstream_gene_variant | 0.25 | rifampicin | Uncertain significance |
rpoA | 3878806 | c.-299C>G | upstream_gene_variant | 0.28 | rifampicin | |
rpoA | 3878809 | c.-302T>C | upstream_gene_variant | 0.31 | rifampicin | |
rpoA | 3878818 | c.-311G>A | upstream_gene_variant | 0.26 | rifampicin | |
rpoA | 3878824 | c.-317G>C | upstream_gene_variant | 0.24 | rifampicin | |
rpoA | 3878833 | c.-326C>G | upstream_gene_variant | 0.23 | rifampicin | |
rpoA | 3878836 | c.-331_-329delAAGinsTCC | upstream_gene_variant | 0.22 | rifampicin | |
rpoA | 3878853 | c.-346G>A | upstream_gene_variant | 0.23 | rifampicin | |
rpoA | 3878878 | c.-371T>C | upstream_gene_variant | 0.25 | rifampicin | Uncertain significance |
rpoA | 3878890 | c.-383C>G | upstream_gene_variant | 0.28 | rifampicin | |
rpoA | 3878896 | c.-389G>C | upstream_gene_variant | 0.26 | rifampicin | |
rpoA | 3878909 | c.-402A>G | upstream_gene_variant | 0.26 | rifampicin | |
rpoA | 3878914 | c.-407T>C | upstream_gene_variant | 0.26 | rifampicin | Uncertain significance |
rpoA | 3878917 | c.-410G>A | upstream_gene_variant | 0.26 | rifampicin | Uncertain significance |
rpoA | 3878932 | c.-425G>A | upstream_gene_variant | 0.22 | rifampicin | |
rpoA | 3878938 | c.-431T>C | upstream_gene_variant | 0.24 | rifampicin | |
rpoA | 3878947 | c.-440G>C | upstream_gene_variant | 0.21 | rifampicin | Uncertain significance |
rpoA | 3878968 | c.-461T>C | upstream_gene_variant | 0.21 | rifampicin | Uncertain significance |
rpoA | 3878976 | c.-469A>G | upstream_gene_variant | 0.22 | rifampicin | Uncertain significance |
rpoA | 3878986 | c.-479G>C | upstream_gene_variant | 0.22 | rifampicin | |
rpoA | 3878998 | c.-491C>G | upstream_gene_variant | 0.24 | rifampicin | Uncertain significance |
rpoA | 3879005 | c.-499_-498delAAinsCG | upstream_gene_variant | 0.22 | rifampicin | |
rpoA | 3879013 | c.-506A>G | upstream_gene_variant | 0.21 | rifampicin | |
rpoA | 3879079 | c.-572A>G | upstream_gene_variant | 0.18 | rifampicin | |
rpoA | 3879088 | c.-581A>C | upstream_gene_variant | 0.18 | rifampicin | |
clpC1 | 4038356 | c.2349T>C | synonymous_variant | 0.2 | pyrazinamide | |
clpC1 | 4038359 | c.2346A>G | synonymous_variant | 0.21 | pyrazinamide | |
clpC1 | 4038368 | c.2337T>C | synonymous_variant | 0.23 | pyrazinamide | |
clpC1 | 4038388 | c.2317T>C | synonymous_variant | 0.21 | pyrazinamide | |
clpC1 | 4038392 | c.2313C>T | synonymous_variant | 0.21 | pyrazinamide | |
clpC1 | 4038398 | c.2307G>T | synonymous_variant | 0.22 | pyrazinamide | |
clpC1 | 4038403 | c.2302T>C | synonymous_variant | 0.22 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4038407 | c.2298G>C | synonymous_variant | 0.23 | pyrazinamide | |
clpC1 | 4038419 | c.2286T>C | synonymous_variant | 0.2 | pyrazinamide | |
clpC1 | 4038433 | c.2272C>T | synonymous_variant | 0.19 | pyrazinamide | |
clpC1 | 4038434 | c.2271G>A | synonymous_variant | 0.2 | pyrazinamide | |
clpC1 | 4038444 | p.Ala754Lys | missense_variant | 0.19 | pyrazinamide | |
clpC1 | 4038446 | c.2259T>C | synonymous_variant | 0.19 | pyrazinamide | |
clpC1 | 4038456 | p.Val750Glu | missense_variant | 0.21 | pyrazinamide | |
clpC1 | 4038460 | p.Leu749Met | missense_variant | 0.21 | pyrazinamide | |
clpC1 | 4038486 | p.Gly740Asn | missense_variant | 0.2 | pyrazinamide | |
clpC1 | 4038489 | p.Ala739Gly | missense_variant | 0.2 | pyrazinamide | |
clpC1 | 4038494 | c.2211G>C | synonymous_variant | 0.2 | pyrazinamide | |
clpC1 | 4038497 | p.Ser736Gln | missense_variant | 0.2 | pyrazinamide | |
clpC1 | 4038530 | p.Glu725Asp | missense_variant | 0.2 | pyrazinamide | |
clpC1 | 4038596 | c.2109A>G | synonymous_variant | 0.22 | pyrazinamide | |
clpC1 | 4038623 | c.2082A>G | synonymous_variant | 0.19 | pyrazinamide | |
clpC1 | 4038640 | p.Asp689Asn | missense_variant | 0.21 | pyrazinamide | |
clpC1 | 4038653 | c.2052C>T | synonymous_variant | 0.19 | pyrazinamide | |
clpC1 | 4038658 | p.Lys683Gln | missense_variant | 0.18 | pyrazinamide | |
clpC1 | 4038661 | p.Ser682Thr | missense_variant | 0.17 | pyrazinamide | |
clpC1 | 4038662 | c.2043T>C | synonymous_variant | 0.17 | pyrazinamide | |
clpC1 | 4038671 | c.2034T>C | synonymous_variant | 0.18 | pyrazinamide | |
clpC1 | 4038683 | c.2022T>C | synonymous_variant | 0.18 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4038695 | c.2010C>G | synonymous_variant | 0.18 | pyrazinamide | |
clpC1 | 4038704 | c.2001T>C | synonymous_variant | 0.16 | pyrazinamide | |
clpC1 | 4038713 | c.1992T>C | synonymous_variant | 0.17 | pyrazinamide | |
clpC1 | 4038749 | c.1956C>G | synonymous_variant | 0.22 | pyrazinamide | |
clpC1 | 4038755 | c.1950G>T | synonymous_variant | 0.22 | pyrazinamide | |
clpC1 | 4038770 | c.1935C>T | synonymous_variant | 0.22 | pyrazinamide | |
clpC1 | 4038773 | c.1932T>C | synonymous_variant | 0.23 | pyrazinamide | |
clpC1 | 4038782 | c.1923G>C | synonymous_variant | 0.21 | pyrazinamide | |
clpC1 | 4038812 | c.1893T>C | synonymous_variant | 0.22 | pyrazinamide | |
clpC1 | 4038821 | c.1884G>A | synonymous_variant | 0.19 | pyrazinamide | |
clpC1 | 4038845 | c.1860G>C | synonymous_variant | 0.26 | pyrazinamide | |
clpC1 | 4038860 | c.1845G>C | synonymous_variant | 0.3 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4038878 | c.1827A>G | synonymous_variant | 0.31 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4038908 | c.1797C>G | synonymous_variant | 0.36 | pyrazinamide | |
clpC1 | 4038914 | c.1791G>C | synonymous_variant | 0.37 | pyrazinamide | |
clpC1 | 4038923 | c.1780_1782delCTAinsTTG | synonymous_variant | 0.35 | pyrazinamide | |
clpC1 | 4038953 | c.1752A>G | synonymous_variant | 0.35 | pyrazinamide | |
clpC1 | 4038956 | c.1749T>C | synonymous_variant | 0.36 | pyrazinamide | |
clpC1 | 4038965 | c.1740T>C | synonymous_variant | 0.32 | pyrazinamide | |
clpC1 | 4038971 | c.1734T>C | synonymous_variant | 0.3 | pyrazinamide | |
clpC1 | 4038974 | c.1731T>C | synonymous_variant | 0.3 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4038989 | c.1716T>C | synonymous_variant | 0.33 | pyrazinamide | |
clpC1 | 4038997 | c.1708T>C | synonymous_variant | 0.31 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4039004 | c.1701C>G | synonymous_variant | 0.34 | pyrazinamide | |
clpC1 | 4039022 | c.1683A>G | synonymous_variant | 0.33 | pyrazinamide | |
clpC1 | 4039064 | c.1641C>T | synonymous_variant | 0.34 | pyrazinamide | |
clpC1 | 4039097 | c.1608G>C | synonymous_variant | 0.31 | pyrazinamide | |
clpC1 | 4039103 | c.1602T>C | synonymous_variant | 0.3 | pyrazinamide | |
clpC1 | 4039106 | c.1599G>C | synonymous_variant | 0.28 | pyrazinamide | |
clpC1 | 4039112 | c.1593C>G | synonymous_variant | 0.28 | pyrazinamide | |
clpC1 | 4039121 | c.1584T>C | synonymous_variant | 0.28 | pyrazinamide | |
clpC1 | 4039142 | c.1563A>G | synonymous_variant | 0.29 | pyrazinamide | |
clpC1 | 4039145 | c.1560G>C | synonymous_variant | 0.29 | pyrazinamide | |
clpC1 | 4039169 | p.Glu512Asp | missense_variant | 0.28 | pyrazinamide | |
clpC1 | 4039172 | c.1533A>G | synonymous_variant | 0.28 | pyrazinamide | |
clpC1 | 4039178 | c.1527G>C | synonymous_variant | 0.28 | pyrazinamide | |
clpC1 | 4039183 | c.1522T>C | synonymous_variant | 0.28 | pyrazinamide | |
clpC1 | 4039186 | c.1519C>T | synonymous_variant | 0.29 | pyrazinamide | |
clpC1 | 4039226 | c.1479T>C | synonymous_variant | 0.25 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4039274 | c.1431G>C | synonymous_variant | 0.21 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4039286 | c.1419T>C | synonymous_variant | 0.23 | pyrazinamide | |
clpC1 | 4039295 | c.1410A>C | synonymous_variant | 0.23 | pyrazinamide | |
clpC1 | 4039298 | c.1407T>C | synonymous_variant | 0.23 | pyrazinamide | |
clpC1 | 4039319 | c.1386T>C | synonymous_variant | 0.21 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4039322 | c.1383T>C | synonymous_variant | 0.21 | pyrazinamide | |
clpC1 | 4039328 | c.1377A>C | synonymous_variant | 0.21 | pyrazinamide | |
clpC1 | 4039331 | c.1374C>G | synonymous_variant | 0.21 | pyrazinamide | |
clpC1 | 4039337 | p.Thr456Gln | missense_variant | 0.22 | pyrazinamide | |
clpC1 | 4039349 | c.1356C>T | synonymous_variant | 0.22 | pyrazinamide | |
clpC1 | 4039352 | c.1353C>G | synonymous_variant | 0.24 | pyrazinamide | |
clpC1 | 4039364 | c.1341C>G | synonymous_variant | 0.24 | pyrazinamide | |
clpC1 | 4039391 | c.1314T>G | synonymous_variant | 0.21 | pyrazinamide | |
clpC1 | 4039409 | c.1296T>C | synonymous_variant | 0.22 | pyrazinamide | |
clpC1 | 4039412 | c.1293T>G | synonymous_variant | 0.2 | pyrazinamide | |
clpC1 | 4039415 | p.Glu430Asp | missense_variant | 0.19 | pyrazinamide | Uncertain significance |
clpC1 | 4039430 | c.1275T>C | synonymous_variant | 0.21 | pyrazinamide | |
clpC1 | 4039442 | c.1263A>G | synonymous_variant | 0.21 | pyrazinamide | |
clpC1 | 4039454 | c.1251A>G | synonymous_variant | 0.22 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4039463 | c.1242C>G | synonymous_variant | 0.24 | pyrazinamide | |
clpC1 | 4039466 | c.1239T>C | synonymous_variant | 0.24 | pyrazinamide | |
clpC1 | 4039469 | c.1236T>C | synonymous_variant | 0.24 | pyrazinamide | |
clpC1 | 4039480 | c.1225C>A | synonymous_variant | 0.24 | pyrazinamide | |
clpC1 | 4039481 | c.1224T>G | synonymous_variant | 0.24 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4039484 | c.1221T>C | synonymous_variant | 0.24 | pyrazinamide | |
clpC1 | 4039517 | c.1188C>G | synonymous_variant | 0.24 | pyrazinamide | |
clpC1 | 4039556 | c.1149G>C | synonymous_variant | 0.22 | pyrazinamide | |
clpC1 | 4039559 | c.1146C>G | synonymous_variant | 0.22 | pyrazinamide | |
clpC1 | 4039562 | c.1143C>G | synonymous_variant | 0.22 | pyrazinamide | |
clpC1 | 4039565 | c.1140G>C | synonymous_variant | 0.22 | pyrazinamide | |
clpC1 | 4039570 | p.Met379Leu | missense_variant | 0.22 | pyrazinamide | Uncertain significance |
clpC1 | 4039576 | p.Ala377Pro | missense_variant | 0.22 | pyrazinamide | |
clpC1 | 4039577 | c.1128T>C | synonymous_variant | 0.22 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4039589 | c.1116G>C | synonymous_variant | 0.23 | pyrazinamide | |
clpC1 | 4039610 | c.1095G>C | synonymous_variant | 0.22 | pyrazinamide | |
clpC1 | 4039616 | c.1089G>C | synonymous_variant | 0.22 | pyrazinamide | |
clpC1 | 4039622 | c.1083C>T | synonymous_variant | 0.22 | pyrazinamide | |
clpC1 | 4039661 | c.1044T>G | synonymous_variant | 0.25 | pyrazinamide | |
clpC1 | 4039664 | c.1041G>C | synonymous_variant | 0.25 | pyrazinamide | |
clpC1 | 4039694 | c.1011G>C | synonymous_variant | 0.24 | pyrazinamide | |
clpC1 | 4039724 | c.981A>G | synonymous_variant | 0.21 | pyrazinamide | |
clpC1 | 4039751 | c.954A>G | synonymous_variant | 0.17 | pyrazinamide | |
clpC1 | 4039760 | c.945T>C | synonymous_variant | 0.17 | pyrazinamide | |
clpC1 | 4039766 | c.939T>C | synonymous_variant | 0.17 | pyrazinamide | |
clpC1 | 4039769 | c.936C>G | synonymous_variant | 0.17 | pyrazinamide | |
clpC1 | 4039775 | c.930G>C | synonymous_variant | 0.17 | pyrazinamide | |
clpC1 | 4039781 | c.924G>C | synonymous_variant | 0.17 | pyrazinamide | |
clpC1 | 4039790 | c.915C>G | synonymous_variant | 0.18 | pyrazinamide | |
clpC1 | 4039805 | c.900C>T | synonymous_variant | 0.19 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4039817 | c.888A>C | synonymous_variant | 0.2 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4039820 | c.885T>G | synonymous_variant | 0.2 | pyrazinamide | |
clpC1 | 4039826 | c.879C>G | synonymous_variant | 0.22 | pyrazinamide | |
clpC1 | 4039831 | c.874T>C | synonymous_variant | 0.22 | pyrazinamide | |
clpC1 | 4039850 | c.855T>C | synonymous_variant | 0.19 | pyrazinamide | |
clpC1 | 4039865 | c.840T>C | synonymous_variant | 0.18 | pyrazinamide | |
clpC1 | 4039898 | c.807C>G | synonymous_variant | 0.21 | pyrazinamide | |
clpC1 | 4039928 | c.775_777delAGCinsTCG | synonymous_variant | 0.19 | pyrazinamide | |
clpC1 | 4039931 | c.774T>C | synonymous_variant | 0.18 | pyrazinamide | |
clpC1 | 4039937 | c.768G>C | synonymous_variant | 0.18 | pyrazinamide | |
clpC1 | 4039946 | c.759A>C | synonymous_variant | 0.18 | pyrazinamide | |
clpC1 | 4039951 | c.754C>T | synonymous_variant | 0.2 | pyrazinamide | |
clpC1 | 4039952 | c.753T>C | synonymous_variant | 0.2 | pyrazinamide | |
clpC1 | 4039979 | c.726C>G | synonymous_variant | 0.22 | pyrazinamide | |
clpC1 | 4039988 | c.717C>G | synonymous_variant | 0.22 | pyrazinamide | |
clpC1 | 4039991 | c.714G>C | synonymous_variant | 0.22 | pyrazinamide | |
clpC1 | 4040021 | c.684A>C | synonymous_variant | 0.22 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040024 | c.681A>G | synonymous_variant | 0.21 | pyrazinamide | |
clpC1 | 4040033 | c.672G>C | synonymous_variant | 0.2 | pyrazinamide | |
clpC1 | 4040036 | c.669C>G | synonymous_variant | 0.2 | pyrazinamide | |
clpC1 | 4040090 | p.Ser205Thr | missense_variant | 0.16 | pyrazinamide | |
clpC1 | 4040093 | c.612C>G | synonymous_variant | 0.16 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040105 | c.600C>G | synonymous_variant | 0.2 | pyrazinamide | |
clpC1 | 4040147 | c.558A>G | synonymous_variant | 0.27 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040162 | c.543G>C | synonymous_variant | 0.23 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040165 | c.540G>C | synonymous_variant | 0.23 | pyrazinamide | |
clpC1 | 4040171 | c.534C>G | synonymous_variant | 0.25 | pyrazinamide | |
clpC1 | 4040201 | c.504C>G | synonymous_variant | 0.24 | pyrazinamide | |
clpC1 | 4040204 | c.501G>C | synonymous_variant | 0.22 | pyrazinamide | |
clpC1 | 4040207 | c.498T>G | synonymous_variant | 0.23 | pyrazinamide | |
clpC1 | 4040210 | c.495G>C | synonymous_variant | 0.23 | pyrazinamide | |
clpC1 | 4040213 | c.490_492delTCTinsAGC | synonymous_variant | 0.23 | pyrazinamide | |
clpC1 | 4040225 | c.480A>C | synonymous_variant | 0.22 | pyrazinamide | |
clpC1 | 4040228 | c.477G>T | synonymous_variant | 0.23 | pyrazinamide | |
clpC1 | 4040231 | c.474C>T | synonymous_variant | 0.23 | pyrazinamide | |
clpC1 | 4040237 | c.468C>T | synonymous_variant | 0.27 | pyrazinamide | |
clpC1 | 4040246 | c.459C>G | synonymous_variant | 0.27 | pyrazinamide | |
clpC1 | 4040249 | c.456A>G | synonymous_variant | 0.27 | pyrazinamide | |
clpC1 | 4040267 | c.438A>G | synonymous_variant | 0.27 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040273 | c.432T>C | synonymous_variant | 0.28 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040277 | c.427_428delTCinsAG | synonymous_variant | 0.25 | pyrazinamide | |
clpC1 | 4040279 | c.426C>G | synonymous_variant | 0.25 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040291 | c.414G>C | synonymous_variant | 0.28 | pyrazinamide | |
clpC1 | 4040318 | c.387C>G | synonymous_variant | 0.22 | pyrazinamide | |
clpC1 | 4040330 | c.375C>G | synonymous_variant | 0.21 | pyrazinamide | |
clpC1 | 4040342 | c.363C>G | synonymous_variant | 0.23 | pyrazinamide | |
clpC1 | 4040354 | c.351A>G | synonymous_variant | 0.23 | pyrazinamide | |
clpC1 | 4040363 | c.342A>T | synonymous_variant | 0.2 | pyrazinamide | |
clpC1 | 4040369 | c.336C>G | synonymous_variant | 0.19 | pyrazinamide | |
clpC1 | 4040381 | c.324T>C | synonymous_variant | 0.17 | pyrazinamide | |
clpC1 | 4040393 | c.312G>C | synonymous_variant | 0.17 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040411 | c.294T>C | synonymous_variant | 0.16 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040471 | c.234T>C | synonymous_variant | 0.17 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040522 | c.183T>C | synonymous_variant | 0.17 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040528 | c.177G>C | synonymous_variant | 0.16 | pyrazinamide | |
panD | 4044725 | c.-444C>T | upstream_gene_variant | 0.18 | pyrazinamide | |
panD | 4044737 | c.-456T>C | upstream_gene_variant | 0.19 | pyrazinamide | |
panD | 4044746 | c.-467_-465delGTGinsATC | upstream_gene_variant | 0.19 | pyrazinamide | |
panD | 4044752 | c.-471T>C | upstream_gene_variant | 0.2 | pyrazinamide | |
panD | 4044758 | c.-477C>T | upstream_gene_variant | 0.19 | pyrazinamide | |
panD | 4044779 | c.-500_-498delCTAinsTGC | upstream_gene_variant | 0.22 | pyrazinamide | |
panD | 4044788 | c.-507G>C | upstream_gene_variant | 0.23 | pyrazinamide | |
panD | 4044791 | c.-510G>C | upstream_gene_variant | 0.24 | pyrazinamide | |
panD | 4044800 | c.-519C>G | upstream_gene_variant | 0.24 | pyrazinamide | |
panD | 4044812 | c.-531A>C | upstream_gene_variant | 0.24 | pyrazinamide | |
panD | 4044818 | c.-538_-537delCGinsAC | upstream_gene_variant | 0.24 | pyrazinamide | |
panD | 4044823 | c.-542G>C | upstream_gene_variant | 0.24 | pyrazinamide | |
panD | 4044844 | c.-563T>C | upstream_gene_variant | 0.21 | pyrazinamide | |
panD | 4044848 | c.-567T>G | upstream_gene_variant | 0.22 | pyrazinamide | |
panD | 4044854 | c.-573A>G | upstream_gene_variant | 0.2 | pyrazinamide | |
panD | 4044860 | c.-579C>G | upstream_gene_variant | 0.2 | pyrazinamide | |
panD | 4044869 | c.-588G>A | upstream_gene_variant | 0.18 | pyrazinamide | |
panD | 4044872 | c.-591C>G | upstream_gene_variant | 0.19 | pyrazinamide | |
panD | 4044890 | c.-609G>C | upstream_gene_variant | 0.2 | pyrazinamide | |
panD | 4044895 | c.-614A>G | upstream_gene_variant | 0.19 | pyrazinamide | |
panD | 4044896 | c.-615T>G | upstream_gene_variant | 0.19 | pyrazinamide | |
panD | 4044902 | c.-623_-621delACGinsGCC | upstream_gene_variant | 0.19 | pyrazinamide | |
panD | 4044908 | c.-628_-627delCTinsTC | upstream_gene_variant | 0.19 | pyrazinamide | |
panD | 4044917 | c.-636G>C | upstream_gene_variant | 0.19 | pyrazinamide | |
panD | 4044926 | c.-645C>A | upstream_gene_variant | 0.19 | pyrazinamide | |
panD | 4044929 | c.-648G>C | upstream_gene_variant | 0.19 | pyrazinamide | |
panD | 4044935 | c.-655_-654delAAinsTG | upstream_gene_variant | 0.19 | pyrazinamide | |
panD | 4044941 | c.-660G>C | upstream_gene_variant | 0.2 | pyrazinamide | |
panD | 4044954 | c.-674_-673delCCinsAT | upstream_gene_variant | 0.2 | pyrazinamide | |
panD | 4044959 | c.-678C>G | upstream_gene_variant | 0.19 | pyrazinamide | |
panD | 4044980 | c.-699A>G | upstream_gene_variant | 0.18 | pyrazinamide | |
panD | 4044983 | c.-702G>T | upstream_gene_variant | 0.18 | pyrazinamide | |
panD | 4044989 | c.-708T>C | upstream_gene_variant | 0.17 | pyrazinamide | |
panD | 4045000 | c.-719A>C | upstream_gene_variant | 0.17 | pyrazinamide | |
panD | 4045001 | c.-720G>C | upstream_gene_variant | 0.17 | pyrazinamide | |
panD | 4045028 | c.-747C>G | upstream_gene_variant | 0.16 | pyrazinamide | |
glpK | 4139432 | c.324C>T | synonymous_variant | 0.17 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
glpK | 4139453 | c.303T>C | synonymous_variant | 0.16 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
glpK | 4139489 | c.267G>T | synonymous_variant | 0.14 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | ||||||
isoniazid | Not assoc w R - Interim | |||||
streptomycin | Not assoc w R - Interim | |||||
rifampicin | Not assoc w R - Interim | |||||
ethambutol | Not assoc w R - Interim | |||||
glpK | 4139525 | c.231C>T | synonymous_variant | 0.14 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
glpK | 4139531 | c.225C>A | synonymous_variant | 0.15 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
glpK | 4139554 | p.Ala68Ser | missense_variant | 0.15 | levofloxacin | |
moxifloxacin | ||||||
isoniazid | ||||||
streptomycin | ||||||
rifampicin | ||||||
ethambutol | ||||||
embC | 4239298 | c.-565C>T | upstream_gene_variant | 1.0 | ethambutol | Not assoc w R |
embC | 4240726 | c.864G>C | synonymous_variant | 0.2 | ethambutol | Not assoc w R - Interim |
embC | 4241449 | c.1587C>G | synonymous_variant | 0.18 | ethambutol | |
embC | 4241453 | p.Ile531Val | missense_variant | 0.19 | ethambutol | |
embC | 4241479 | c.1617C>G | synonymous_variant | 0.18 | ethambutol | |
embC | 4241480 | c.1618T>C | synonymous_variant | 0.18 | ethambutol | |
embC | 4241496 | p.Ala545Gly | missense_variant | 0.2 | ethambutol | |
embC | 4241500 | c.1638A>C | synonymous_variant | 0.19 | ethambutol | |
embC | 4241501 | p.Ser547Thr | missense_variant | 0.2 | ethambutol | |
embC | 4241506 | c.1644G>C | synonymous_variant | 0.2 | ethambutol | |
embC | 4241518 | c.1656A>G | synonymous_variant | 0.21 | ethambutol | |
embC | 4241521 | c.1659T>C | synonymous_variant | 0.21 | ethambutol | Not assoc w R - Interim |
embC | 4241530 | c.1668C>A | synonymous_variant | 0.23 | ethambutol | |
embC | 4241536 | c.1674A>G | synonymous_variant | 0.2 | ethambutol | |
embC | 4241539 | c.1677T>C | synonymous_variant | 0.2 | ethambutol | Not assoc w R - Interim |
embC | 4241545 | c.1683T>C | synonymous_variant | 0.2 | ethambutol | |
embC | 4241548 | c.1686T>C | synonymous_variant | 0.2 | ethambutol | |
embC | 4241551 | c.1689A>G | synonymous_variant | 0.2 | ethambutol | |
embC | 4241567 | p.Ile569Val | missense_variant | 0.22 | ethambutol | |
embC | 4241572 | c.1710C>G | synonymous_variant | 0.22 | ethambutol | |
embC | 4241578 | c.1716G>C | synonymous_variant | 0.21 | ethambutol | |
embC | 4241584 | c.1722T>C | synonymous_variant | 0.21 | ethambutol | |
embC | 4241587 | c.1725C>G | synonymous_variant | 0.21 | ethambutol | |
embC | 4241591 | p.Leu577Val | missense_variant | 0.21 | ethambutol | |
embC | 4241611 | c.1749G>C | synonymous_variant | 0.21 | ethambutol | |
embC | 4241614 | c.1752A>C | synonymous_variant | 0.21 | ethambutol | |
embC | 4241626 | c.1764T>C | synonymous_variant | 0.17 | ethambutol | |
embC | 4241635 | c.1773G>C | synonymous_variant | 0.18 | ethambutol | |
embC | 4241650 | p.Leu596Phe | missense_variant | 0.16 | ethambutol | |
embC | 4241657 | p.Ser599Pro | missense_variant | 0.18 | ethambutol | |
embC | 4241665 | c.1803G>C | synonymous_variant | 0.16 | ethambutol | |
embC | 4242643 | c.2781C>T | synonymous_variant | 0.99 | ethambutol | Not assoc w R |
embC | 4242803 | p.Val981Leu | missense_variant | 0.96 | ethambutol | Not assoc w R |
embA | 4245198 | p.Leu656Ile | missense_variant | 0.18 | ethambutol | |
embA | 4245207 | c.1975T>C | synonymous_variant | 0.19 | ethambutol | |
embA | 4245222 | p.Tyr664Gln | missense_variant | 0.19 | ethambutol | |
embA | 4245248 | c.2016G>C | synonymous_variant | 0.22 | ethambutol | |
embA | 4245257 | c.2025A>G | synonymous_variant | 0.24 | ethambutol | |
embA | 4245263 | c.2031A>G | synonymous_variant | 0.22 | ethambutol | Not assoc w R - Interim |
embA | 4245282 | p.Ile684Val | missense_variant | 0.19 | ethambutol | |
embA | 4245285 | c.2053T>C | synonymous_variant | 0.19 | ethambutol | |
embA | 4245290 | c.2058C>G | synonymous_variant | 0.19 | ethambutol | |
embA | 4245293 | c.2061T>G | synonymous_variant | 0.19 | ethambutol | |
embA | 4245296 | c.2064G>C | synonymous_variant | 0.2 | ethambutol | |
embA | 4245299 | c.2067A>G | synonymous_variant | 0.19 | ethambutol | |
embA | 4245315 | p.Val695Thr | missense_variant | 0.17 | ethambutol | |
embB | 4247611 | c.1098G>T | synonymous_variant | 0.15 | ethambutol | Not assoc w R - Interim |
embB | 4247629 | c.1116C>G | synonymous_variant | 0.18 | ethambutol | |
embB | 4247632 | c.1119C>G | synonymous_variant | 0.17 | ethambutol | |
embB | 4247638 | c.1125G>C | synonymous_variant | 0.17 | ethambutol | |
embB | 4247646 | p.Glu378Ala | missense_variant | 0.17 | ethambutol | Not assoc w R |
embB | 4247683 | c.1170C>G | synonymous_variant | 0.17 | ethambutol | |
embB | 4247761 | c.1248T>C | synonymous_variant | 0.18 | ethambutol | |
embB | 4247773 | c.1260G>A | synonymous_variant | 0.18 | ethambutol | |
embB | 4247776 | c.1263G>T | synonymous_variant | 0.18 | ethambutol | |
embB | 4247800 | c.1287A>T | synonymous_variant | 0.15 | ethambutol | |
embB | 4247819 | p.Val436Ile | missense_variant | 0.15 | ethambutol | Uncertain significance |
embB | 4247830 | c.1317A>C | synonymous_variant | 0.17 | ethambutol | |
embB | 4247836 | c.1323A>G | synonymous_variant | 0.17 | ethambutol | Not assoc w R - Interim |
embB | 4247839 | c.1326G>C | synonymous_variant | 0.17 | ethambutol | Not assoc w R - Interim |
embB | 4247866 | c.1353G>C | synonymous_variant | 0.2 | ethambutol | |
embB | 4247875 | c.1362G>C | synonymous_variant | 0.22 | ethambutol | |
embB | 4247876 | c.1363C>T | synonymous_variant | 0.22 | ethambutol | |
embB | 4247881 | c.1368G>C | synonymous_variant | 0.22 | ethambutol | |
embB | 4247887 | c.1374C>T | synonymous_variant | 0.23 | ethambutol | Not assoc w R - Interim |
embB | 4247893 | c.1380C>T | synonymous_variant | 0.24 | ethambutol | |
embB | 4247899 | p.Met462Ile | missense_variant | 0.24 | ethambutol | |
embB | 4247905 | c.1392G>C | synonymous_variant | 0.23 | ethambutol | Not assoc w R - Interim |
embB | 4247909 | c.1396T>C | synonymous_variant | 0.25 | ethambutol | |
embB | 4247914 | c.1401G>C | synonymous_variant | 0.25 | ethambutol | Not assoc w R - Interim |
embB | 4247926 | c.1413C>T | synonymous_variant | 0.25 | ethambutol | |
embB | 4247932 | c.1419C>G | synonymous_variant | 0.26 | ethambutol | |
embB | 4247940 | p.Leu476Trp | missense_variant | 0.25 | ethambutol | |
embB | 4247945 | c.1432T>C | synonymous_variant | 0.25 | ethambutol | |
embB | 4247951 | p.Ser480Ala | missense_variant | 0.24 | ethambutol | |
embB | 4247956 | c.1443G>C | synonymous_variant | 0.23 | ethambutol | Not assoc w R - Interim |
embB | 4247974 | c.1461C>G | synonymous_variant | 0.22 | ethambutol | |
embB | 4248007 | c.1494C>G | synonymous_variant | 0.22 | ethambutol | |
embB | 4248011 | p.Ser500Arg | missense_variant | 0.21 | ethambutol | |
embB | 4248014 | p.Thr501Ala | missense_variant | 0.21 | ethambutol | Uncertain significance |
embB | 4248035 | p.Val508Ile | missense_variant | 0.22 | ethambutol | |
embB | 4248040 | c.1527C>G | synonymous_variant | 0.22 | ethambutol | |
embB | 4248041 | p.Ala510Thr | missense_variant | 0.22 | ethambutol | Uncertain significance |
embB | 4248044 | p.Lys511Ala | missense_variant | 0.22 | ethambutol | |
embB | 4248070 | c.1557T>C | synonymous_variant | 0.24 | ethambutol | |
embB | 4248085 | c.1572T>C | synonymous_variant | 0.21 | ethambutol | |
embB | 4248097 | c.1584C>G | synonymous_variant | 0.23 | ethambutol | |
embB | 4248130 | c.1617G>C | synonymous_variant | 0.22 | ethambutol | |
embB | 4248133 | c.1620C>G | synonymous_variant | 0.22 | ethambutol | |
embB | 4248139 | c.1626C>G | synonymous_variant | 0.22 | ethambutol | |
embB | 4248142 | c.1629T>C | synonymous_variant | 0.22 | ethambutol | |
embB | 4248143 | c.1630T>C | synonymous_variant | 0.22 | ethambutol | |
embB | 4248157 | c.1644A>G | synonymous_variant | 0.24 | ethambutol | Not assoc w R - Interim |
embB | 4248199 | c.1686A>G | synonymous_variant | 0.19 | ethambutol | |
embB | 4248200 | p.Ile563Val | missense_variant | 0.19 | ethambutol | |
embB | 4248205 | c.1692C>G | synonymous_variant | 0.19 | ethambutol | |
embB | 4248206 | p.Ser565Gly | missense_variant | 0.19 | ethambutol | Uncertain significance |
embB | 4248220 | c.1707A>C | synonymous_variant | 0.21 | ethambutol | |
embB | 4248304 | c.1791G>C | synonymous_variant | 0.17 | ethambutol | |
embB | 4249411 | c.2898G>A | synonymous_variant | 0.18 | ethambutol | |
embB | 4249417 | c.2904A>G | synonymous_variant | 0.18 | ethambutol | |
embB | 4249424 | p.Leu971Met | missense_variant | 0.16 | ethambutol | |
embB | 4249429 | c.2916C>T | synonymous_variant | 0.17 | ethambutol | |
embB | 4249432 | c.2919A>G | synonymous_variant | 0.17 | ethambutol | |
embB | 4249441 | c.2928A>G | synonymous_variant | 0.18 | ethambutol | Not assoc w R - Interim |
embB | 4249444 | c.2931T>C | synonymous_variant | 0.19 | ethambutol | |
embB | 4249447 | c.2934G>C | synonymous_variant | 0.2 | ethambutol | |
embB | 4249469 | p.Leu986Met | missense_variant | 0.2 | ethambutol | |
embB | 4249486 | c.2973T>G | synonymous_variant | 0.21 | ethambutol | |
embB | 4249498 | c.2985G>C | synonymous_variant | 0.24 | ethambutol | |
embB | 4249521 | p.Ala1003Val | missense_variant | 0.23 | ethambutol | |
embB | 4249525 | c.3012T>C | synonymous_variant | 0.23 | ethambutol | Not assoc w R - Interim |
embB | 4249529 | p.Ile1006Val | missense_variant | 0.23 | ethambutol | |
embB | 4249532 | p.Ala1007Thr | missense_variant | 0.23 | ethambutol | Uncertain significance |
embB | 4249537 | c.3024A>G | synonymous_variant | 0.23 | ethambutol | |
embB | 4249543 | c.3030G>C | synonymous_variant | 0.23 | ethambutol | |
embB | 4249546 | c.3033G>A | synonymous_variant | 0.23 | ethambutol | |
embB | 4249558 | c.3045A>C | synonymous_variant | 0.22 | ethambutol | |
embB | 4249568 | p.Ser1019Thr | missense_variant | 0.21 | ethambutol | |
embB | 4249573 | c.3060T>C | synonymous_variant | 0.2 | ethambutol | |
embB | 4249579 | c.3066G>A | synonymous_variant | 0.18 | ethambutol | |
embB | 4249580 | p.Leu1023Met | missense_variant | 0.18 | ethambutol | |
embB | 4249594 | c.3081G>C | synonymous_variant | 0.17 | ethambutol | |
embB | 4249606 | c.3093C>A | synonymous_variant | 0.16 | ethambutol | |
aftB | 4269201 | c.-365A>G | upstream_gene_variant | 0.18 | ethambutol | |
aftB | 4269206 | c.-370C>T | upstream_gene_variant | 0.18 | ethambutol | |
ubiA | 4269220 | p.Ala205Lys | missense_variant | 0.16 | ethambutol | |
ubiA | 4269222 | c.612T>C | synonymous_variant | 0.17 | ethambutol | Not assoc w R - Interim |
aftB | 4269242 | c.-406C>T | upstream_gene_variant | 0.17 | ethambutol | |
ubiA | 4269243 | p.His197Gln | missense_variant | 0.17 | ethambutol | |
aftB | 4269249 | c.-413G>A | upstream_gene_variant | 0.18 | ethambutol | |
aftB | 4269258 | c.-422C>T | upstream_gene_variant | 0.18 | ethambutol | |
ubiA | 4269312 | c.522G>A | synonymous_variant | 0.16 | ethambutol | Not assoc w R - Interim |
ubiA | 4269329 | p.Lys169Glu | missense_variant | 0.18 | ethambutol | |
aftB | 4269342 | c.-506G>C | upstream_gene_variant | 0.2 | ethambutol | |
ubiA | 4269380 | p.Val152Ile | missense_variant | 0.22 | ethambutol | |
ubiA | 4269387 | p.Glu149Asp | missense_variant | 0.2 | ethambutol | Not assoc w R |
ubiA | 4269390 | p.Val148Leu | missense_variant | 0.19 | ethambutol | |
aftB | 4269402 | c.-566T>C | upstream_gene_variant | 0.19 | ethambutol | |
aftB | 4269405 | c.-569G>A | upstream_gene_variant | 0.18 | ethambutol | |
aftB | 4269411 | c.-575T>G | upstream_gene_variant | 0.17 | ethambutol | |
aftB | 4269414 | c.-578T>C | upstream_gene_variant | 0.18 | ethambutol | |
aftB | 4269420 | c.-584T>C | upstream_gene_variant | 0.18 | ethambutol | |
aftB | 4269428 | c.-592T>C | upstream_gene_variant | 0.18 | ethambutol | |
ubiA | 4269436 | p.Ala133Gly | missense_variant | 0.17 | ethambutol | |
whiB6 | 4338595 | c.-75delG | upstream_gene_variant | 1.0 | kanamycin | Not assoc w R |
capreomycin | Not assoc w R | |||||
amikacin | Not assoc w R | |||||
whiB6 | 4338732 | c.-211C>T | upstream_gene_variant | 1.0 | kanamycin | |
capreomycin | ||||||
amikacin |