Rv0668 - c.1281G>C


Drug resistance types
35 Sensitive 27 RR-TB 41 HR-TB 23 MDR-TB 5 Pre-XDR-TB 1 XDR-TB 155 Other
lineage Counts
lineage Count
La3;M.canetti 9
lineage2.1;lineage4.9 15
lineage4.9;lineage6.3 6
lineage4.3.4.2.1 2
lineage3 8
lineage4.1.1.1 3
lineage4.9 45
lineage4.1.2.1 16
24
lineage4.4.1.1 5
lineage4.2.1 4
lineage2.2.1 23
lineage2.1;lineage4.9;lineage7 1
lineage4.8 16
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage6.3.1 1
lineage2.1 5
lineage6.1.3 2
lineage2.1;lineage4.9;lineage6.3 9
lineage3.1.2.2 1
M.canetti;lineage2.1;lineage4.9 2
lineage4.7 2
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
La3;lineage1.1.2 1
lineage4.9;lineage7 3
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La3;lineage2.1;lineage4.9;lineage6.3 3
lineage2.2.1;lineage3 1
La1.7.1 1
lineage4 2
lineage4.4 1
M.canetti 11
lineage4.1.3 2
lineage4.2.2.2 2
La2 1
lineage3.1 1
lineage1.1.3.2 1
lineage2.2 2
La3 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La3;lineage4.8 2
lineage4.1.2 1
lineage1.2.2.2 1
La3;lineage2.1;lineage4.9 2
lineage3.1.1 1
lineage4.6.2.2 1
lineage2.1;lineage6.3 2
lineage1.1.2 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.2.2 1
lineage4.1.1.3 2
La1.3 1
La1.6;La3;lineage4.6.4;lineage4.9 1
lineage2.2.1;lineage6.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage4.3.2 1
lineage4.3.3 3
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
La3;lineage2 1
lineage4.8.1 1
La3;lineage2.1;lineage6.3 1
La1.2.BCG 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage3.1.2.1;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage2.2.1 1
La3;lineage4.9 1
lineage3.1.2.1 1
lineage4.4.1.2 1
La1.6;La3;lineage4.9 2
lineage2.2;lineage4 1
La2;M.canetti 1
La1.2.BCG;La1.8.1 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
lineage4.3;lineage4.9 1
lineage4.3.1 1
lineage4.1 1
M.canetti;lineage2.1;lineage6.3 1
La3;lineage2.2.1 1
spoligotype Counts
spoligotype Count
None 287
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR1336826 Sensitive La3;M.canetti None
SRR6045380 Other lineage2.1;lineage4.9 None
SRR1165667 Other lineage4.9;lineage6.3 None
ERR11466146 Other lineage4.3.4.2.1 None
ERR4820586 Other lineage3 gb
SRR25827507 MDR-TB lineage4.1.1.1 None
ERR9786617 Other lineage4.1.1.1 None
ERR108125 RR-TB lineage4.9 None
ERR9786642 Other lineage4.1.2.1 None
SRR1184381 MDR-TB None
ERR9786604 Other None
ERR4815604 Other None
SRR1184372 MDR-TB None
ERR9117709 Other None
SRR6789626 Other None
ERR4796577 HR-TB None
ERR234659 HR-TB None
SRR18213713 HR-TB None
SRR1172857 Other None
SRR7496517 Other None
ERR9787197 Other None
SRR28119805 Other lineage4.9 None
ERR4817060 Other None
ERR1035157 Other lineage4.9 None
SRR6896383 Sensitive lineage4.4.1.1 None
ERR10762275 MDR-TB lineage4.2.1 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR1336821 Sensitive La3;M.canetti None
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR2514327 HR-TB lineage4.8 None
ERR9786515 Other lineage4.1.2.1 None
SRR3675549 Other lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR9787139 Other lineage6.3.1 None
SRR18572456 Sensitive lineage4.9 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR1710057 Other lineage2.1 None
ERR9787336 RR-TB lineage6.1.3 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR2446544 Sensitive lineage3 nl
ERR4822222 Other lineage3.1.2.2 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR16156697 RR-TB lineage2.2.1 None
SRR6045217 Other lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR2101471 Sensitive lineage4.4.1.1 None
ERR3797065 RR-TB lineage4.9 None
ERR4819932 Other lineage4.7 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR3283046 Sensitive lineage4.9 None
SAMEA3501073 RR-TB lineage4.8 None
SRR1140724 Other lineage2.2.1 None
ERR9786569 Other lineage4.8 None
ERR2513229 MDR-TB lineage2.2.1 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR702406 Other lineage2.1 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR3675214 Other lineage4.9 None
SRR10869071 MDR-TB lineage2.2.1 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
SRR1184312 Other lineage2.2.1 None
SRR7645927 Other lineage4.8 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR7131160 Sensitive lineage3 None
SRR3742667 Sensitive lineage4.9 None
ERR1815538 Other La1.7.1 None
SRR3675232 Other lineage4.1.2.1 None
ERR2027263 Other lineage4 None
SRR16627752 RR-TB lineage4.4 None
ERR266120 Other M.canetti None
ERR502912 Other lineage2.2.1 None
SRR24061597 Sensitive M.canetti None
ERR3804169 HR-TB lineage4.1.3 None
ERR2513470 Other lineage4.2.2.2 None
SRR13888750 Other La2 None
SRR1184346 HR-TB lineage3.1 None
SRR1173400 Other lineage4.9 None
SRR7645901 MDR-TB lineage2.2.1 None
SRR1175052 HR-TB lineage4.9 None
SRR7645928 Other lineage4.7 None
SRR3675582 Other lineage4.9 None
ERR553132 MDR-TB lineage4.1.2.1 None
ERR4796351 Sensitive lineage4.9 None
ERR7821123 Other lineage1.1.3.2 None
ERR4799513 HR-TB lineage2.2 None
ERR4815079 RR-TB lineage3 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR551180 Sensitive M.canetti None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1184294 Other lineage4.9 None
ERR1336823 Sensitive La3;M.canetti None
SRR1196566 Other lineage4.9 None
SRR1172728 RR-TB La3 None
ERR11049020 Other lineage4.8 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4819781 Other lineage2.2.1 None
SRR3675457 Other lineage4.9 None
ERR12015083 Other La3;lineage4.8 None
ERR4818347 Other lineage4.1.2 None
ERR4797201 Other lineage1.2.2.2 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR2229542 Other lineage4.8 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1173310 Other lineage3.1.1 None
SRR1062919 HR-TB lineage2.2.1 None
ERR3283006 RR-TB lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
ERR9786682 Other lineage4.1.2.1 None
SRR3675572 Other None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR4818615 Sensitive None
ERR4407463 HR-TB None
SRR1196768 MDR-TB None
SRR28119777 Other lineage4.9 None
ERR3597004 Sensitive M.canetti None
ERR266125 Other La3;M.canetti None
SRR3675275 Other lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR25827687 MDR-TB lineage1.1.2 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR3797069 Other lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
SRR18003019 Other lineage2.2.1 None
ERR11465025 Other lineage4.1.1.3 None
ERR1336824 Sensitive La3;M.canetti None
ERR4769423 Other La1.3 None
ERR387051 RR-TB lineage4.9 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
SRR6045548 Other lineage4.9 None
ERR3275548 Sensitive lineage3 nl
SRR14782539 MDR-TB lineage4.2.1 None
ERR9786627 Other lineage4.1.2.1 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR1173778 Other lineage4.9 None
SRR3675495 RR-TB lineage2.1;lineage4.9 None
SRR6046066 Other lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR1049674 HR-TB lineage2.2.1 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR7645972 MDR-TB lineage4.2.1 None
SRR6789621 Other lineage4.9 None
ERR3283032 Other lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR7755649 MDR-TB lineage4.2.1 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
SRR7645906 Other lineage2.2.1 None
SRR7645899 Other lineage2.2.1 None
SRR3675280 RR-TB lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR9117805 Other lineage4.3.2 None
ERR3797070 Other lineage4.9 None
SRR3675221 Other lineage4.9 None
ERR9786421 Other lineage4.1.2.1 None
SRR1165699 Other lineage4.9 None
ERR1336820 Sensitive La3;M.canetti None
SRR21732980 Other lineage4.3.3 None
ERR2517457 Sensitive lineage3 None
SRR21690574 Other lineage4.1.2.1 None
ERR4814352 Other lineage2.2.1 None
ERR978767_ERR978765_ERR978766 RR-TB lineage4.8 None
ERR3804155 Other lineage4.1.2.1 None
ERR3797062 RR-TB lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
ERR9786694 Other lineage4.1.2.1 None
ERR2693257 HR-TB La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
SRR20969677 HR-TB La3;lineage2 None
SRR3675456 RR-TB lineage4.9;lineage7 None
ERR11081258 Other lineage4.8 None
SRR12708389 MDR-TB lineage4.8.1 None
SRR1172817 Other La3 None
ERR9786601 Other lineage4.1.2.1 None
ERR1043164 Other La3;M.canetti None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675311 Other lineage4.9 None
SRR17567930 Sensitive lineage4.4.1.1 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR7131023 Other lineage4.1.2.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR551179 Sensitive M.canetti None
SRR7496509 Other None
SRR18289195 Sensitive M.canetti None
ERR9786671 Other None
SRR1175074 Other None
SRR28119717 Other lineage4.9;lineage6.3 None
SRR1173363 Other None
SRR25827682 Other None
SRR3675236 Other None
ERR4816999 Other None
ERR9786444 Sensitive lineage4.8 None
SRR1196583 Other lineage4.9 None
SRR1049675 HR-TB lineage2.2.1 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR4798262 HR-TB La1.2.BCG None
ERR4800341 HR-TB lineage3 None
SRR7755657 Other lineage4.8 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR4817893 Other La3;lineage4.8 None
SRR17567917 RR-TB lineage4.4.1.1 None
ERR502908 HR-TB lineage2.2.1 None
ERR2514390 Sensitive lineage3.1.2.1;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR7645971 Other lineage2.2.1 None
SRR6785413 Other lineage2.2.1 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR10522763 Sensitive M.canetti None
SRR26399973 Other La3;lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4817735 Other lineage4.8 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR16156804 Sensitive lineage4.9 None
ERR5162090 RR-TB lineage4.9 None
SRR7755655 Other lineage4.1.2.1 None
ERR4817896 HR-TB lineage2.2.1 None
ERR4816717 RR-TB lineage3.1.2.1 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR176549 Other lineage4.3.4.2.1 None
SRR1196677 Other lineage2.2 None
SRR17567887 Sensitive lineage4.4.1.2 None
SRR1173218 Other lineage4.3.3 None
ERR2229791 Other lineage4.9 None
ERR3797061 Other La1.6;La3;lineage4.9 None
ERR3283044 Other lineage4 None
SRR16156832 RR-TB lineage2.2;lineage4 None
ERR266126 Other La2;M.canetti None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR10522783 Sensitive M.canetti None
ERR4819655 Other lineage4.8 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR12142341 HR-TB lineage2.1 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR3675234 HR-TB La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR978765 RR-TB lineage4.8 None
ERR2693254 Other La1.6;La3;lineage4.9 None
ERR1336825 Sensitive La3;M.canetti None
ERR036207 Other lineage4.3;lineage4.9 None
SRR26159043 Other lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR6046382 RR-TB lineage2.2.1 None
SRR7496472 Other lineage4.9 None
SRR5818586 RR-TB lineage4.2.2.2 None
ERR551182 Sensitive M.canetti None
ERR176793 Other lineage4.1.1.1 None
ERR4815555 Sensitive lineage4.1.2.1 None
SRR1172951 Other lineage4.9 None
ERR551181 Sensitive M.canetti None
ERR11049143 Sensitive lineage4.1.2.1 None
ERR1336822 Sensitive M.canetti None
ERR978767 RR-TB lineage4.8 None
ERR4829039 RR-TB lineage4.3.1 None
SRR1172885 HR-TB lineage4.9 None
SRR18572454 RR-TB lineage4.9 None
ERR978766 RR-TB lineage4.8 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9786440 Other lineage4.1 None
ERR4829238 Sensitive lineage3 None
ERR4814748 Other lineage4.8 None
SRR6458423 HR-TB lineage2.2.1 None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR1043163 Other La3;M.canetti None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR1196546 Other lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR3416776 Other lineage2.1 None
ERR4815752 Other lineage4.9 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
ERR11465024 Other lineage4.1.1.3 None
ERR9787165 Other lineage6.1.3 None