Rv0668 - c.1281G>C
Drug resistance types
25 Sensitive
21 RR-TB
71 HR-TB
28 MDR-TB
9 Pre-XDR-TB
0 XDR-TB
116 Other
lineage Counts
| lineage | Count |
|---|---|
| 88 | |
| lineage3 | 11 |
| lineage4.9 | 35 |
| lineage2.2.1 | 26 |
| lineage3.1.2.2 | 1 |
| lineage4.2.1 | 7 |
| lineage4.2.2.2 | 2 |
| lineage4.8 | 17 |
| lineage4 | 9 |
| lineage4.3.1 | 1 |
| lineage4.4.1.1 | 7 |
| lineage4.3.2 | 2 |
| lineage4.1.2.1 | 17 |
| lineage4.7 | 2 |
| La1.8.1 | 2 |
| lineage4.1.3 | 2 |
| La1.3 | 1 |
| lineage2 | 3 |
| lineage1.2.2.2 | 1 |
| lineage2.2 | 3 |
| La1 | 1 |
| lineage1.1.2 | 1 |
| lineage1.1.3.2 | 1 |
| lineage4.1 | 1 |
| lineage4.1.1 | 2 |
| lineage4.6.2.2 | 1 |
| lineage6 | 2 |
| lineage6.3.1 | 1 |
| lineage4.3.3 | 5 |
| lineage3.1 | 2 |
| La2 | 1 |
| lineage2.1 | 2 |
| lineage4.4 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.5 | 1 |
| lineage3.1.1 | 1 |
| La1.7.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.1;lineage1 | 1 |
| lineage4.8;La3 | 1 |
| lineage4.1.2 | 1 |
| lineage4.9;lineage3.1.2.1 | 1 |
| lineage1.2.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 270 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2693231 | Other | None | ERR2693257 | Other | None | ERR2693230 | Other | None | ERR2693254 | Other | None | ERR2517457 | Sensitive | lineage3 | None | SRR6044890 | Other | lineage4.9 | None | ERR2660539 | Other | lineage4.9 | None | ERR4821550 | Other | lineage2.2.1 | None | ERR4822222 | Other | lineage3.1.2.2 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR6045817 | Sensitive | lineage4.8 | gb | SRR6044790 | HR-TB | None | ERR2693232 | Other | lineage4.9 | None | SRR6044855 | Other | lineage4.9 | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6045217 | Other | lineage4 | None | SRR6046066 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6046305 | Other | lineage4.9 | None | SRR6046362 | HR-TB | None | ERR502532 | HR-TB | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6785413 | Other | lineage2.2.1 | None | ERR4829039 | RR-TB | lineage4.3.1 | None | ERR4829238 | Sensitive | lineage3 | None | SRR6046460 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6046609 | Sensitive | lineage4.9 | None | SRR6046834 | Sensitive | lineage4.9 | None | SRR6896383 | RR-TB | lineage4.4.1.1 | None | SRR6789626 | Other | None | SRR6797469 | Sensitive | lineage4.3.2 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR7131160 | Sensitive | lineage3 | None | SRR7645899 | RR-TB | lineage2.2.1 | None | ERR502908 | HR-TB | lineage2.2.1 | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR7496509 | Other | None | SRR7496517 | Other | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR7645927 | Other | lineage4.8 | None | SRR7645928 | RR-TB | lineage4.7 | None | SRR7646018 | MDR-TB | lineage4.2.1 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR7755657 | Other | lineage4.8 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | ERR1035157 | Other | lineage4.9 | None | SRR7645971 | Other | lineage2.2.1 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | ERR323043 | HR-TB | None | ERR036207 | Other | lineage4.9 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | ERR11049143 | Sensitive | lineage4.1.2.1 | None | ERR11049020 | Other | lineage4.8 | None | ERR3283032 | HR-TB | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR3283024 | Other | None | ERR3283027 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283051 | Other | lineage4.9 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3283049 | Sensitive | lineage4.9 | None | ERR3797014 | Other | None | ERR3797044 | Other | None | ERR3797017 | Other | None | ERR3797067 | Other | La1.8.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3797061 | Other | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797069 | Other | None | ERR3797071 | Other | lineage4.9 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR387051 | HR-TB | None | ERR4407463 | HR-TB | None | ERR4769423 | Other | La1.3 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4796577 | MDR-TB | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4798262 | HR-TB | La1 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4800341 | Other | lineage3 | None | ERR4811142 | MDR-TB | None | ERR4811105 | HR-TB | None | ERR4810741 | HR-TB | None | ERR4811022 | HR-TB | None | ERR9117805 | Other | lineage4.3.2 | None | ERR5336148 | Other | None | ERR702406 | HR-TB | None | ERR736874 | HR-TB | None | ERR9117709 | HR-TB | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR736867 | HR-TB | None | ERR751317 | Sensitive | lineage4.9 | None | ERR7821123 | Other | lineage1.1.3.2 | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9786440 | Other | lineage4.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786617 | Other | lineage4.1.1 | None | ERR9786515 | Other | lineage4.1.2.1 | None | ERR9786569 | Other | lineage4.8 | None | ERR9786604 | Other | None | ERR9786671 | Other | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9786627 | Other | lineage4.1.2.1 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9787197 | Other | None | ERR9787165 | Other | lineage6 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR9787336 | Other | lineage6 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1172234 | Other | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1169194 | Other | None | SRR1172857 | MDR-TB | None | SRR1172728 | MDR-TB | None | SRR1172817 | HR-TB | None | SRR1172844 | MDR-TB | lineage4.4.1.1 | None | SRR1172951 | Other | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1173310 | MDR-TB | None | SRR1173118 | Other | None | SRR1173153 | HR-TB | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173484 | Other | lineage4 | None | SRR1173363 | HR-TB | None | SRR1173384 | Other | lineage4 | None | SRR1173400 | Other | None | SRR1173330 | Pre-XDR-TB | lineage4 | None | SRR1173788 | Other | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173629 | Other | None | SRR1173706 | Other | lineage4.9 | None | SRR1173719 | HR-TB | lineage3 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173778 | Other | None | SRR1184294 | HR-TB | None | SRR1175049 | RR-TB | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1175074 | MDR-TB | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1196546 | HR-TB | None | SRR1184372 | MDR-TB | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1184381 | MDR-TB | None | SRR1184380 | HR-TB | None | SRR1184388 | Other | None | SRR1196494 | MDR-TB | None | SRR1196677 | HR-TB | lineage2 | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196566 | HR-TB | None | SRR1196587 | MDR-TB | lineage4.3.3 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR1196768 | MDR-TB | None | SRR13837502 | Sensitive | lineage4.9 | None | SRR12416824 | HR-TB | None | SRR12142341 | HR-TB | None | SRR13888750 | Other | La2 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR14334195 | Pre-XDR-TB | lineage2.2.1 | None | SRR15368973 | Other | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR16156832 | RR-TB | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR1710057 | Other | lineage2.1 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR17567887 | Sensitive | lineage4.4.1.2 | None | SRR17567930 | Other | lineage4.4.1.1 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR18572454 | RR-TB | lineage4.9 | None | SRR18003019 | Other | lineage2.2.1 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR19303884 | HR-TB | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR18572456 | Sensitive | lineage4.9 | None | SRR19304036 | HR-TB | None | SRR2101471 | RR-TB | lineage4.4.1.1 | None | SRR20969677 | HR-TB | lineage2 | None | ERR11068570 | Other | lineage4 | None | ERR11081257 | Other | lineage4.8 | None | SRR3675465 | HR-TB | None | ERR4815604 | HR-TB | None | ERR11081258 | Other | lineage4.8 | None | SRR24061597 | Sensitive | None | ERR176793 | Other | lineage4.1.1 | None | ERR4815777 | Other | lineage4.9 | None | ERR4814352 | HR-TB | lineage2.2.1 | None | ERR4815334 | Other | lineage3.1.1 | None | SRR3675221 | HR-TB | None | ERR1815538 | Other | La1.7.1 | None | SRR3416776 | Other | lineage2.1 | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675236 | HR-TB | None | ERR2446544 | Sensitive | lineage3 | nl | SRR3675234 | Other | None | ERR4814748 | Other | lineage4.8 | None | SRR3675232 | Other | lineage4.1.2.1 | None | ERR176549 | Other | lineage4.3.4.2.1 | None | SRR3675311 | Other | None | SRR3675284 | HR-TB | lineage4.9 | None | ERR4815079 | RR-TB | lineage3 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4815555 | Sensitive | lineage4.1.2.1 | None | SRR3675456 | HR-TB | None | ERR4815752 | Other | lineage4.9 | None | ERR4816999 | Other | None | ERR2229542 | Other | lineage4.8 | None | SRR3675555 | HR-TB | None | ERR4817037 | Other | lineage4.9 | None | ERR2027263 | Other | lineage4 | None | ERR2229084 | Sensitive | lineage4.8 | dk | ERR3275548 | Sensitive | lineage3 | nl | ERR4817060 | RR-TB | None | SRR3742665 | HR-TB | None | SRR3675572 | Other | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | SRR3742667 | Sensitive | lineage4.9 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR4816585 | Other | lineage2.2 | None | ERR502912 | Other | lineage2.2.1 | None | ERR2229791 | RR-TB | lineage4.9 | None | ERR4817735 | Other | lineage4.8 | None | ERR4816755 | Other | lineage4.1.1.3 | None | ERR4817301 | Other | lineage4.9 | None | ERR2512986 | Other | lineage3 | None | ERR4819068 | Sensitive | lineage4.1;lineage1 | None | ERR4819002 | HR-TB | lineage4.8 | None | SRR7496472 | Other | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR553132 | MDR-TB | lineage4.1.2.1 | None | ERR4817893 | Other | lineage4.8;La3 | None | ERR4818021 | Other | La1.8.1 | None | ERR4818347 | Other | lineage4.1.2 | None | ERR234659 | HR-TB | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR2513470 | Other | lineage4.2.2.2 | None | ERR2509885 | RR-TB | lineage3 | None | ERR4819280 | Sensitive | lineage4 | None | ERR4818615 | Other | None | ERR4819093 | Other | lineage4.3.3 | None | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR4819655 | Other | lineage4.8 | None | ERR4819430 | Sensitive | lineage4.1.2.1 | None | ERR4819491 | Other | lineage4.1.2.1 | None | ERR2514390 | Sensitive | lineage4.9;lineage3.1.2.1 | None | ERR2514181 | Other | lineage1.2.1.2.1 | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR4819730 | Other | lineage4.8 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR5341302 | HR-TB | None | ERR4819932 | Other | lineage4.7 | None | ERR4820586 | Other | lineage3 | gb | SRR5341333 | HR-TB | None |
|---|
