Run ID: ERR4816717
Sample name:
Date: 01-04-2023 14:35:22
Number of reads: 1605624
Percentage reads mapped: 29.0
Strain: lineage3.1.2.1
Drug-resistance: RR-TB
Drug | Resistance | Supporting mutations |
---|
Lineage | Family | Main Spoligotype | RDs | Frequency |
---|---|---|---|---|
lineage3 | East-African-Indian | CAS | RD750 | 1.0 |
lineage3.1 | East-African-Indian | Non-CAS1-Delhi | RD750 | 1.0 |
lineage3.1.2 | East-African-Indian | CAS;CAS2 | RD750 | 1.0 |
lineage3.1.2.1 | East-African-Indian | CAS2 | RD750 | 1.0 |
Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs |
---|---|---|---|---|---|
rpoB | 761127 | p.Ser441Ala | missense_variant | 0.67 | rifampicin |
rrs | 1472644 | n.799C>T | non_coding_transcript_exon_variant | 0.83 | streptomycin |
rrs | 1473247 | n.1402C>A | non_coding_transcript_exon_variant | 0.78 | kanamycin, capreomycin, aminoglycosides, amikacin |
rrs | 1473329 | n.1484G>T | non_coding_transcript_exon_variant | 0.76 | kanamycin, capreomycin, aminoglycosides, amikacin |
Gene | Chromosome position | Mutation | Type | Estimated fraction |
---|---|---|---|---|
gyrB | 6266 | p.Pro343Asp | missense_variant | 0.24 |
gyrB | 6280 | c.1041T>C | synonymous_variant | 0.37 |
gyrB | 6283 | c.1044C>T | synonymous_variant | 0.37 |
gyrB | 6286 | c.1047T>C | synonymous_variant | 0.38 |
gyrB | 6292 | c.1053G>C | synonymous_variant | 0.38 |
gyrB | 6295 | c.1056A>G | synonymous_variant | 0.39 |
gyrB | 6302 | p.Ala355Thr | missense_variant | 0.41 |
gyrA | 6307 | c.-995T>G | upstream_gene_variant | 0.42 |
gyrB | 6323 | p.Val362Ile | missense_variant | 0.41 |
gyrB | 6326 | p.Ser363Ala | missense_variant | 0.39 |
gyrA | 6331 | c.-971A>G | upstream_gene_variant | 0.42 |
gyrA | 6362 | c.-940T>C | upstream_gene_variant | 0.25 |
gyrA | 7362 | p.Glu21Gln | missense_variant | 1.0 |
gyrA | 7585 | p.Ser95Thr | missense_variant | 1.0 |
gyrA | 9304 | p.Gly668Asp | missense_variant | 1.0 |
fgd1 | 491742 | c.960T>C | synonymous_variant | 1.0 |
ccsA | 619968 | c.78G>A | synonymous_variant | 1.0 |
rpoB | 759746 | c.-61C>T | upstream_gene_variant | 1.0 |
rpoB | 760997 | c.1191G>C | synonymous_variant | 0.17 |
rpoB | 761015 | c.1209G>C | synonymous_variant | 0.18 |
rpoB | 761027 | c.1221A>C | synonymous_variant | 0.34 |
rpoB | 761036 | c.1230G>C | synonymous_variant | 0.46 |
rpoB | 761037 | c.1231T>C | synonymous_variant | 0.46 |
rpoB | 761051 | c.1245G>C | synonymous_variant | 0.68 |
rpoB | 761054 | c.1248G>C | synonymous_variant | 0.69 |
rpoB | 761060 | c.1254C>G | synonymous_variant | 0.71 |
rpoB | 761064 | p.Ala420Ser | missense_variant | 0.72 |
rpoB | 761084 | c.1278C>G | synonymous_variant | 0.74 |
rpoB | 761088 | c.1282_1283delAGinsTC | synonymous_variant | 0.7 |
rpoB | 761097 | c.1291_1293delAGCinsTCG | synonymous_variant | 0.68 |
rpoB | 761102 | c.1296A>G | synonymous_variant | 0.68 |
rpoB | 761132 | c.1326G>C | synonymous_variant | 0.61 |
rpoB | 761133 | c.1327T>C | synonymous_variant | 0.59 |
rpoB | 761147 | c.1341C>G | synonymous_variant | 0.37 |
rpoB | 761150 | c.1344A>C | synonymous_variant | 0.35 |
rpoB | 761156 | c.1350G>C | synonymous_variant | 0.29 |
rpoB | 761165 | c.1359G>C | synonymous_variant | 0.19 |
rpoB | 761204 | c.1398C>G | synonymous_variant | 0.17 |
rpoB | 761219 | c.1413G>C | synonymous_variant | 0.17 |
rpoB | 761222 | c.1416G>C | synonymous_variant | 0.17 |
rpoB | 761549 | c.1743G>C | synonymous_variant | 0.18 |
rpoB | 761552 | c.1746G>C | synonymous_variant | 0.18 |
rpoB | 761562 | p.Ala586Ser | missense_variant | 0.18 |
rpoB | 761565 | p.Met587Leu | missense_variant | 0.18 |
rpoB | 761570 | c.1764T>C | synonymous_variant | 0.18 |
rpoB | 761573 | c.1767C>G | synonymous_variant | 0.18 |
rpoB | 761575 | p.Phe590Tyr | missense_variant | 0.17 |
rpoB | 761627 | c.1821C>T | synonymous_variant | 0.17 |
rpoB | 761908 | p.Cys701Ser | missense_variant | 0.12 |
rpoB | 761912 | c.2106T>G | synonymous_variant | 0.13 |
rpoB | 761916 | p.Asp704Gln | missense_variant | 0.13 |
rpoB | 761925 | p.Met707Leu | missense_variant | 0.13 |
rpoB | 761930 | c.2124G>C | synonymous_variant | 0.13 |
rpoB | 761945 | c.2139G>C | synonymous_variant | 0.15 |
rpoB | 761954 | c.2148C>G | synonymous_variant | 0.14 |
rpoB | 761955 | p.Ile717Tyr | missense_variant | 0.14 |
rpoB | 761961 | p.Pro719Ser | missense_variant | 0.12 |
rpoB | 761974 | p.His723Leu | missense_variant | 0.21 |
rpoB | 762003 | p.Asn733Gln | missense_variant | 0.29 |
rpoB | 762008 | c.2202C>G | synonymous_variant | 0.29 |
rpoB | 762009 | p.Leu735Met | missense_variant | 0.29 |
rpoB | 762015 | p.Glu737Ser | missense_variant | 0.29 |
rpoB | 762020 | p.Glu738Asp | missense_variant | 0.31 |
rpoB | 762029 | c.2223C>G | synonymous_variant | 0.44 |
rpoB | 762053 | c.2247T>C | synonymous_variant | 0.56 |
rpoB | 762062 | c.2256T>C | synonymous_variant | 0.57 |
rpoB | 762065 | c.2259T>C | synonymous_variant | 0.55 |
rpoB | 762080 | c.2274G>C | synonymous_variant | 0.38 |
rpoB | 762083 | c.2277T>C | synonymous_variant | 0.37 |
rpoB | 762086 | c.2280G>C | synonymous_variant | 0.38 |
rpoB | 762101 | c.2295C>G | synonymous_variant | 0.55 |
rpoB | 762114 | p.Ile770Val | missense_variant | 0.6 |
rpoB | 762122 | p.Asp772Glu | missense_variant | 0.53 |
rpoB | 762125 | p.Glu773Asp | missense_variant | 0.47 |
rpoB | 762132 | p.Ala776Ser | missense_variant | 0.41 |
rpoB | 762136 | p.Asp777Ala | missense_variant | 0.38 |
rpoB | 762143 | c.2337T>C | synonymous_variant | 0.3 |
rpoB | 762149 | c.2343G>C | synonymous_variant | 0.27 |
rpoB | 762156 | p.Val784Ile | missense_variant | 0.27 |
rpoB | 762160 | p.Arg785His | missense_variant | 0.28 |
rpoB | 762167 | c.2361T>C | synonymous_variant | 0.26 |
rpoB | 762175 | c.2370_2372delTCG | disruptive_inframe_deletion | 0.27 |
rpoB | 762181 | c.2375_2376insGGC | disruptive_inframe_insertion | 0.27 |
rpoB | 762218 | c.2412T>C | synonymous_variant | 0.6 |
rpoB | 762233 | c.2427G>C | synonymous_variant | 0.66 |
rpoB | 762254 | c.2448T>C | synonymous_variant | 0.65 |
rpoB | 762257 | c.2451C>G | synonymous_variant | 0.65 |
rpoB | 762266 | c.2460T>C | synonymous_variant | 0.64 |
rpoB | 762273 | p.Ala823Ser | missense_variant | 0.66 |
rpoB | 762293 | c.2487T>C | synonymous_variant | 0.61 |
rpoB | 762296 | c.2490G>C | synonymous_variant | 0.6 |
rpoB | 762305 | c.2499G>C | synonymous_variant | 0.5 |
rpoB | 762317 | c.2511A>G | synonymous_variant | 0.3 |
rpoB | 762325 | p.Lys840Thr | missense_variant | 0.15 |
rpoB | 762387 | p.Glu861Gln | missense_variant | 0.2 |
rpoC | 762398 | c.-972T>C | upstream_gene_variant | 0.29 |
rpoC | 762404 | c.-966T>C | upstream_gene_variant | 0.39 |
rpoC | 762410 | c.-960T>C | upstream_gene_variant | 0.47 |
rpoC | 762416 | c.-954A>G | upstream_gene_variant | 0.48 |
rpoB | 762426 | p.Ser874Thr | missense_variant | 0.56 |
rpoC | 762434 | c.-936T>G | upstream_gene_variant | 1.0 |
rpoC | 762443 | c.-927G>C | upstream_gene_variant | 0.64 |
rpoC | 762449 | c.-921C>G | upstream_gene_variant | 0.64 |
rpoC | 762452 | c.-918G>C | upstream_gene_variant | 0.64 |
rpoB | 762474 | p.Gly890Ser | missense_variant | 0.62 |
rpoC | 762482 | c.-888C>T | upstream_gene_variant | 0.45 |
rpoC | 762488 | c.-882G>C | upstream_gene_variant | 0.56 |
rpoC | 762491 | c.-879T>G | upstream_gene_variant | 0.56 |
rpoC | 762503 | c.-867G>C | upstream_gene_variant | 0.52 |
rpoB | 762507 | p.Leu901Met | missense_variant | 0.48 |
rpoC | 762818 | c.-552C>G | upstream_gene_variant | 0.19 |
rpoB | 762832 | p.Ser1009Thr | missense_variant | 0.34 |
rpoB | 762849 | p.Tyr1015Asp | missense_variant | 0.46 |
rpoB | 762855 | p.Val1017Ile | missense_variant | 0.46 |
rpoB | 762858 | p.Thr1018Ser | missense_variant | 0.47 |
rpoC | 762863 | c.-507T>G | upstream_gene_variant | 0.47 |
rpoB | 762870 | p.Met1022Gln | missense_variant | 0.46 |
rpoB | 762879 | p.Met1025Leu | missense_variant | 0.59 |
rpoC | 762929 | c.-441G>C | upstream_gene_variant | 0.59 |
rpoC | 762980 | c.-390T>C | upstream_gene_variant | 0.47 |
rpoC | 762983 | c.-387C>T | upstream_gene_variant | 0.44 |
rpoC | 762989 | c.-381G>C | upstream_gene_variant | 0.4 |
rpoC | 762995 | c.-375G>C | upstream_gene_variant | 0.35 |
rpoB | 763005 | p.Cys1067Val | missense_variant | 0.28 |
rpoB | 763014 | p.Met1070Leu | missense_variant | 0.26 |
rpoB | 763017 | p.Gln1071Glu | missense_variant | 0.26 |
rpoC | 763022 | c.-348C>G | upstream_gene_variant | 0.28 |
rpoC | 763028 | c.-342T>C | upstream_gene_variant | 0.29 |
rpoC | 763031 | c.-339T>G | upstream_gene_variant | 1.0 |
rpoB | 763050 | p.Leu1082Ile | missense_variant | 0.34 |
rpoC | 763053 | c.-317T>C | upstream_gene_variant | 0.36 |
rpoB | 763072 | c.3268_3270delACC | conservative_inframe_deletion | 0.29 |
rpoB | 763078 | c.3272_3273insGCA | disruptive_inframe_insertion | 0.3 |
rpoC | 763082 | c.-288C>T | upstream_gene_variant | 0.29 |
rpoC | 763088 | c.-282C>G | upstream_gene_variant | 0.3 |
rpoC | 763094 | c.-276G>C | upstream_gene_variant | 0.28 |
rpoC | 763103 | c.-267G>C | upstream_gene_variant | 0.28 |
rpoC | 763115 | c.-255T>C | upstream_gene_variant | 0.28 |
rpoB | 763118 | p.Glu1104Asp | missense_variant | 0.26 |
rpoC | 763127 | c.-243G>C | upstream_gene_variant | 0.21 |
rpoC | 763456 | c.87A>G | synonymous_variant | 0.14 |
rpoC | 763468 | c.99G>C | synonymous_variant | 0.24 |
rpoC | 763483 | c.114G>C | synonymous_variant | 0.34 |
rpoC | 763486 | c.117T>C | synonymous_variant | 0.36 |
rpoC | 763501 | p.Asp44Glu | missense_variant | 0.45 |
rpoC | 763504 | c.135C>T | synonymous_variant | 0.44 |
rpoC | 763511 | p.Cys48Asp | missense_variant | 0.44 |
rpoC | 763517 | p.Lys50Arg | missense_variant | 0.43 |
rpoC | 763534 | c.165T>C | synonymous_variant | 0.56 |
rpoC | 763546 | c.177A>G | synonymous_variant | 0.56 |
rpoC | 763570 | c.201G>C | synonymous_variant | 0.58 |
rpoC | 763621 | c.252C>G | synonymous_variant | 0.65 |
rpoC | 763633 | c.264T>C | synonymous_variant | 0.64 |
rpoC | 763660 | c.291T>G | synonymous_variant | 0.68 |
rpoC | 763675 | c.306C>G | synonymous_variant | 0.67 |
rpoC | 763696 | c.327T>C | synonymous_variant | 0.71 |
rpoC | 763705 | c.336G>C | synonymous_variant | 0.72 |
rpoC | 763708 | c.339G>C | synonymous_variant | 0.72 |
rpoC | 763714 | c.345G>C | synonymous_variant | 0.69 |
rpoC | 763717 | c.348T>C | synonymous_variant | 0.69 |
rpoC | 763726 | c.357C>T | synonymous_variant | 0.67 |
rpoC | 763732 | c.363C>G | synonymous_variant | 0.64 |
rpoC | 763741 | c.372C>T | synonymous_variant | 0.6 |
rpoC | 763765 | c.396T>C | synonymous_variant | 0.5 |
rpoC | 763772 | p.Val135Met | missense_variant | 0.47 |
rpoC | 763783 | c.414G>C | synonymous_variant | 0.16 |
rpoC | 763786 | c.417C>G | synonymous_variant | 0.14 |
rpoC | 764297 | p.Met310Leu | missense_variant | 0.21 |
rpoC | 764308 | c.939G>C | synonymous_variant | 0.36 |
rpoC | 764311 | c.942C>G | synonymous_variant | 0.37 |
rpoC | 764317 | c.948C>G | synonymous_variant | 0.38 |
rpoC | 764320 | c.951C>G | synonymous_variant | 0.44 |
rpoC | 764344 | c.975C>T | synonymous_variant | 0.57 |
rpoC | 764359 | c.990C>G | synonymous_variant | 0.57 |
rpoC | 764371 | c.1002G>C | synonymous_variant | 0.57 |
rpoC | 764377 | c.1008C>G | synonymous_variant | 0.56 |
rpoC | 764380 | c.1011G>C | synonymous_variant | 0.55 |
rpoC | 764383 | c.1014C>G | synonymous_variant | 0.54 |
rpoC | 764387 | c.1018T>C | synonymous_variant | 0.55 |
rpoC | 764404 | c.1035C>T | synonymous_variant | 0.5 |
rpoC | 764405 | c.1036A>C | synonymous_variant | 0.5 |
rpoC | 764410 | c.1041G>C | synonymous_variant | 0.54 |
rpoC | 764428 | c.1059G>C | synonymous_variant | 0.43 |
rpoC | 764434 | c.1065A>G | synonymous_variant | 0.44 |
rpoC | 764435 | c.1066_1068delAGGinsCGC | synonymous_variant | 0.44 |
rpoC | 764441 | p.Ile358Leu | missense_variant | 0.44 |
rpoC | 764449 | c.1080G>C | synonymous_variant | 0.47 |
rpoC | 764452 | c.1083T>C | synonymous_variant | 0.47 |
rpoC | 764458 | c.1089G>C | synonymous_variant | 0.54 |
rpoC | 764461 | c.1092A>G | synonymous_variant | 0.56 |
rpoC | 764470 | c.1101C>G | synonymous_variant | 0.58 |
rpoC | 764472 | p.Asn368Ser | missense_variant | 0.58 |
rpoC | 764497 | c.1128A>G | synonymous_variant | 0.55 |
rpoC | 764498 | p.Ser377Ala | missense_variant | 0.57 |
rpoC | 764507 | p.Ala380Ser | missense_variant | 0.68 |
rpoC | 764521 | c.1152T>C | synonymous_variant | 0.76 |
rpoC | 764527 | c.1158C>G | synonymous_variant | 0.77 |
rpoC | 764533 | c.1164C>T | synonymous_variant | 0.75 |
rpoC | 764536 | c.1167G>C | synonymous_variant | 0.74 |
rpoC | 764539 | c.1170C>G | synonymous_variant | 0.76 |
rpoC | 764560 | c.1191T>C | synonymous_variant | 0.76 |
rpoC | 764566 | c.1197C>G | synonymous_variant | 0.75 |
rpoC | 764572 | c.1203G>C | synonymous_variant | 0.73 |
rpoC | 764575 | c.1206T>G | synonymous_variant | 0.72 |
rpoC | 764578 | c.1209C>G | synonymous_variant | 0.71 |
rpoC | 764581 | c.1212T>C | synonymous_variant | 0.7 |
rpoC | 764582 | p.Leu405Met | missense_variant | 0.7 |
rpoC | 764611 | c.1242G>C | synonymous_variant | 0.71 |
rpoC | 764621 | c.1252_1254delCTCinsTTG | synonymous_variant | 0.72 |
rpoC | 764632 | c.1263T>C | synonymous_variant | 0.74 |
rpoC | 764635 | c.1266C>G | synonymous_variant | 0.76 |
rpoC | 764650 | c.1281G>C | synonymous_variant | 0.75 |
rpoC | 764665 | c.1296C>G | synonymous_variant | 0.77 |
rpoC | 764677 | c.1308C>G | synonymous_variant | 0.79 |
rpoC | 764681 | p.Leu438Met | missense_variant | 0.77 |
rpoC | 764706 | p.Leu446Gln | missense_variant | 0.75 |
rpoC | 764713 | c.1344G>C | synonymous_variant | 0.74 |
rpoC | 764731 | c.1362G>C | synonymous_variant | 0.66 |
rpoC | 764746 | c.1377G>C | synonymous_variant | 0.59 |
rpoC | 764758 | c.1389C>G | synonymous_variant | 0.48 |
rpoC | 764764 | c.1395T>C | synonymous_variant | 0.43 |
rpoC | 764780 | c.1411_1412delAGinsTC | synonymous_variant | 0.31 |
rpoC | 764791 | c.1422C>G | synonymous_variant | 0.32 |
rpoC | 764804 | p.Gln479Phe | missense_variant | 0.18 |
rpoC | 764812 | c.1443C>G | synonymous_variant | 0.19 |
rpoC | 764815 | c.1446A>G | synonymous_variant | 0.19 |
rpoC | 764818 | c.1449G>C | synonymous_variant | 0.18 |
rpoC | 764824 | c.1455T>C | synonymous_variant | 0.18 |
rpoC | 764830 | c.1461C>G | synonymous_variant | 0.19 |
rpoC | 764833 | c.1464A>G | synonymous_variant | 0.19 |
rpoC | 764837 | p.Val490Ile | missense_variant | 0.2 |
rpoC | 764843 | p.Ala492Thr | missense_variant | 0.25 |
rpoC | 764858 | c.1489T>C | synonymous_variant | 0.31 |
rpoC | 764863 | c.1494G>C | synonymous_variant | 0.32 |
rpoC | 764872 | c.1503A>C | synonymous_variant | 0.29 |
rpoC | 764887 | c.1518G>C | synonymous_variant | 0.21 |
rpoC | 764888 | c.1519T>C | synonymous_variant | 0.21 |
rpoC | 764893 | c.1524T>G | synonymous_variant | 0.21 |
rpoC | 764911 | c.1542A>G | synonymous_variant | 0.27 |
rpoC | 764912 | p.Met515Gln | missense_variant | 0.27 |
rpoC | 764923 | c.1554A>G | synonymous_variant | 0.32 |
rpoC | 764935 | c.1566T>C | synonymous_variant | 0.23 |
rpoC | 764948 | c.1579T>C | synonymous_variant | 0.19 |
rpoC | 764953 | c.1584G>C | synonymous_variant | 0.19 |
rpoC | 764956 | c.1587T>C | synonymous_variant | 0.2 |
rpoC | 764957 | p.Glu530Ser | missense_variant | 0.19 |
rpoC | 764968 | c.1599T>C | synonymous_variant | 0.21 |
rpoC | 764971 | c.1602C>G | synonymous_variant | 0.23 |
rpoC | 764983 | c.1614T>C | synonymous_variant | 0.24 |
rpoC | 765962 | c.2593T>C | synonymous_variant | 0.11 |
rpoC | 766322 | p.Thr985Ser | missense_variant | 0.14 |
rpoC | 766327 | c.2958C>G | synonymous_variant | 0.17 |
rpoC | 766330 | p.Lys987Asn | missense_variant | 0.17 |
rpoC | 766336 | c.2967C>G | synonymous_variant | 0.18 |
rpoC | 766345 | c.2976T>C | synonymous_variant | 0.19 |
rpoC | 766348 | c.2979A>G | synonymous_variant | 0.19 |
rpoC | 766354 | c.2985C>G | synonymous_variant | 0.21 |
rpoC | 766361 | p.Val998Ile | missense_variant | 0.19 |
rpoC | 766369 | c.3000C>G | synonymous_variant | 0.19 |
rpoC | 766384 | c.3015A>G | synonymous_variant | 0.2 |
rpoC | 766387 | c.3018C>G | synonymous_variant | 0.17 |
mmpL5 | 775639 | p.Ile948Val | missense_variant | 1.0 |
mmpL5 | 776100 | p.Thr794Ile | missense_variant | 1.0 |
rpsL | 781395 | c.-165T>C | upstream_gene_variant | 1.0 |
rpsL | 781751 | c.192G>C | synonymous_variant | 0.47 |
rpsL | 781760 | c.201T>C | synonymous_variant | 0.55 |
rpsL | 781766 | c.207C>T | synonymous_variant | 0.58 |
rpsL | 781793 | c.234G>C | synonymous_variant | 0.56 |
rpsL | 781796 | p.Met79Ile | missense_variant | 0.54 |
rpsL | 781802 | c.243G>C | synonymous_variant | 0.53 |
rpsL | 781814 | c.255C>T | synonymous_variant | 0.51 |
rpsL | 781817 | c.258G>T | synonymous_variant | 0.51 |
rpsL | 781829 | c.270G>C | synonymous_variant | 0.49 |
rpsL | 781832 | c.273T>C | synonymous_variant | 0.49 |
rpsL | 781835 | c.276T>C | synonymous_variant | 0.49 |
rpsL | 781841 | c.282C>G | synonymous_variant | 0.46 |
rpsL | 781851 | p.Ile98Val | missense_variant | 0.16 |
rplC | 800618 | c.-191T>C | upstream_gene_variant | 0.17 |
rplC | 800633 | c.-176T>C | upstream_gene_variant | 0.19 |
rplC | 800639 | c.-170C>G | upstream_gene_variant | 0.19 |
rplC | 800648 | c.-161A>G | upstream_gene_variant | 0.19 |
rplC | 800654 | c.-155T>C | upstream_gene_variant | 0.2 |
rplC | 800667 | c.-142_-140delTCGinsAGC | upstream_gene_variant | 0.18 |
rplC | 800672 | c.-137G>C | upstream_gene_variant | 0.24 |
rplC | 800693 | c.-116A>G | upstream_gene_variant | 0.24 |
rplC | 800703 | c.-106T>C | upstream_gene_variant | 0.2 |
rplC | 800715 | c.-94A>G | upstream_gene_variant | 0.17 |
rrs | 1471659 | n.-187C>T | upstream_gene_variant | 1.0 |
rrs | 1472094 | n.249T>G | non_coding_transcript_exon_variant | 0.73 |
rrs | 1472106 | n.261G>A | non_coding_transcript_exon_variant | 0.79 |
rrs | 1472108 | n.263C>T | non_coding_transcript_exon_variant | 0.83 |
rrs | 1472150 | n.305T>A | non_coding_transcript_exon_variant | 0.87 |
rrs | 1472172 | n.327T>C | non_coding_transcript_exon_variant | 0.89 |
rrs | 1472251 | n.406G>A | non_coding_transcript_exon_variant | 0.78 |
rrs | 1472286 | n.441C>G | non_coding_transcript_exon_variant | 0.29 |
rrs | 1472338 | n.493A>G | non_coding_transcript_exon_variant | 0.67 |
rrs | 1472344 | n.499C>T | non_coding_transcript_exon_variant | 0.67 |
rrs | 1472379 | n.534T>C | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472382 | n.537G>A | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472400 | n.555C>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472422 | n.577T>C | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472425 | n.580T>C | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472505 | n.660G>A | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472530 | n.685G>A | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472558 | n.713G>A | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472569 | n.724G>A | non_coding_transcript_exon_variant | 0.94 |
rrs | 1472573 | n.728C>T | non_coding_transcript_exon_variant | 0.94 |
rrs | 1472574 | n.729T>A | non_coding_transcript_exon_variant | 0.94 |
rrs | 1472581 | n.736A>T | non_coding_transcript_exon_variant | 0.94 |
rrs | 1472584 | n.739A>T | non_coding_transcript_exon_variant | 0.94 |
rrs | 1472607 | n.762G>A | non_coding_transcript_exon_variant | 0.93 |
rrs | 1472655 | n.810G>T | non_coding_transcript_exon_variant | 0.67 |
rrs | 1472660 | n.815T>C | non_coding_transcript_exon_variant | 0.67 |
rrs | 1472692 | n.847T>C | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472714 | n.869A>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472790 | n.945T>C | non_coding_transcript_exon_variant | 0.96 |
rrs | 1472824 | n.979T>A | non_coding_transcript_exon_variant | 0.83 |
rrs | 1472825 | n.980G>A | non_coding_transcript_exon_variant | 0.83 |
rrs | 1472828 | n.983T>C | non_coding_transcript_exon_variant | 0.83 |
rrs | 1472836 | n.991G>A | non_coding_transcript_exon_variant | 0.8 |
rrs | 1472875 | n.1030T>G | non_coding_transcript_exon_variant | 0.67 |
rrs | 1472880 | n.1035G>A | non_coding_transcript_exon_variant | 0.87 |
rrs | 1472895 | n.1050C>T | non_coding_transcript_exon_variant | 0.9 |
rrs | 1472952 | n.1107T>C | non_coding_transcript_exon_variant | 0.94 |
rrs | 1472955 | n.1110C>T | non_coding_transcript_exon_variant | 0.94 |
rrs | 1472956 | n.1111T>C | non_coding_transcript_exon_variant | 0.94 |
rrs | 1472957 | n.1112C>T | non_coding_transcript_exon_variant | 0.94 |
rrs | 1472973 | n.1128A>G | non_coding_transcript_exon_variant | 0.95 |
rrs | 1472987 | n.1142G>A | non_coding_transcript_exon_variant | 0.9 |
rrs | 1472989 | n.1144G>A | non_coding_transcript_exon_variant | 0.89 |
rrs | 1472990 | n.1145A>G | non_coding_transcript_exon_variant | 0.91 |
rrs | 1473035 | n.1190G>A | non_coding_transcript_exon_variant | 0.95 |
rrs | 1473055 | n.1210C>T | non_coding_transcript_exon_variant | 0.95 |
rrs | 1473056 | n.1211A>T | non_coding_transcript_exon_variant | 0.95 |
rrs | 1473066 | n.1221A>G | non_coding_transcript_exon_variant | 0.96 |
rrs | 1473081 | n.1236C>T | non_coding_transcript_exon_variant | 0.32 |
rrs | 1473089 | n.1244A>T | non_coding_transcript_exon_variant | 0.98 |
rrs | 1473093 | n.1248C>T | non_coding_transcript_exon_variant | 0.98 |
rrs | 1473100 | n.1255G>A | non_coding_transcript_exon_variant | 0.97 |
rrs | 1473102 | n.1257C>T | non_coding_transcript_exon_variant | 0.97 |
rrs | 1473104 | n.1259C>T | non_coding_transcript_exon_variant | 0.97 |
rrs | 1473110 | n.1265T>G | non_coding_transcript_exon_variant | 0.97 |
rrs | 1473111 | n.1266A>G | non_coding_transcript_exon_variant | 0.97 |
rrs | 1473115 | n.1270G>T | non_coding_transcript_exon_variant | 0.97 |
rrs | 1473121 | n.1276T>C | non_coding_transcript_exon_variant | 0.97 |
rrs | 1473122 | n.1277T>A | non_coding_transcript_exon_variant | 0.97 |
rrs | 1473145 | n.1300C>T | non_coding_transcript_exon_variant | 0.95 |
rrs | 1473166 | n.1321G>A | non_coding_transcript_exon_variant | 0.89 |
rrs | 1473252 | n.1407T>C | non_coding_transcript_exon_variant | 0.77 |
rrs | 1473259 | n.1414C>T | non_coding_transcript_exon_variant | 0.79 |
rrs | 1473276 | n.1431A>G | non_coding_transcript_exon_variant | 0.75 |
rrs | 1473277 | n.1432G>A | non_coding_transcript_exon_variant | 0.75 |
rrs | 1473290 | n.1445C>T | non_coding_transcript_exon_variant | 0.79 |
rrs | 1473291 | n.1446_1447insT | non_coding_transcript_exon_variant | 0.82 |
rrs | 1473300 | n.1455C>T | non_coding_transcript_exon_variant | 0.81 |
rrs | 1473301 | n.1456T>C | non_coding_transcript_exon_variant | 0.81 |
rrs | 1473315 | n.1470T>C | non_coding_transcript_exon_variant | 0.79 |
rrs | 1473316 | n.1471C>T | non_coding_transcript_exon_variant | 0.78 |
rrl | 1474164 | n.507C>T | non_coding_transcript_exon_variant | 0.6 |
rrl | 1474171 | n.514C>T | non_coding_transcript_exon_variant | 0.6 |
rrl | 1474184 | n.527C>T | non_coding_transcript_exon_variant | 0.5 |
rrl | 1474185 | n.529delA | non_coding_transcript_exon_variant | 0.5 |
rrl | 1474197 | n.540C>T | non_coding_transcript_exon_variant | 0.62 |
rrl | 1474202 | n.545T>C | non_coding_transcript_exon_variant | 0.6 |
rrl | 1474249 | n.592G>T | non_coding_transcript_exon_variant | 0.83 |
rrl | 1474275 | n.618T>G | non_coding_transcript_exon_variant | 0.8 |
rrl | 1474284 | n.631_633delCCT | non_coding_transcript_exon_variant | 0.82 |
rrl | 1474293 | n.637_651delCCTCTCCGGAGGAGG | non_coding_transcript_exon_variant | 0.9 |
rrl | 1474310 | n.653T>G | non_coding_transcript_exon_variant | 0.82 |
rrl | 1474348 | n.691C>T | non_coding_transcript_exon_variant | 0.6 |
rrl | 1474351 | n.694G>T | non_coding_transcript_exon_variant | 0.5 |
rrl | 1474353 | n.696A>T | non_coding_transcript_exon_variant | 0.5 |
rrl | 1474354 | n.697C>T | non_coding_transcript_exon_variant | 0.5 |
rrl | 1474355 | n.698A>C | non_coding_transcript_exon_variant | 0.5 |
rrl | 1474362 | n.705A>G | non_coding_transcript_exon_variant | 0.5 |
rrl | 1474384 | n.727C>T | non_coding_transcript_exon_variant | 0.4 |
rrl | 1474387 | n.730C>T | non_coding_transcript_exon_variant | 0.5 |
rrl | 1474406 | n.749T>G | non_coding_transcript_exon_variant | 0.5 |
rrl | 1474488 | n.831G>T | non_coding_transcript_exon_variant | 0.83 |
rrl | 1474496 | n.839C>T | non_coding_transcript_exon_variant | 0.29 |
rrl | 1474498 | n.841G>T | non_coding_transcript_exon_variant | 0.87 |
rrl | 1474505 | n.848C>G | non_coding_transcript_exon_variant | 0.93 |
rrl | 1474516 | n.859C>A | non_coding_transcript_exon_variant | 0.93 |
rrl | 1474529 | n.872A>C | non_coding_transcript_exon_variant | 0.88 |
rrl | 1474530 | n.873G>A | non_coding_transcript_exon_variant | 0.88 |
rrl | 1474537 | n.880G>A | non_coding_transcript_exon_variant | 0.93 |
rrl | 1474539 | n.882C>T | non_coding_transcript_exon_variant | 0.93 |
rrl | 1474540 | n.883T>G | non_coding_transcript_exon_variant | 0.88 |
rrl | 1474584 | n.927C>T | non_coding_transcript_exon_variant | 0.78 |
rrl | 1474632 | n.975G>T | non_coding_transcript_exon_variant | 0.67 |
rrl | 1474633 | n.977_981delTCACC | non_coding_transcript_exon_variant | 0.67 |
rrl | 1474640 | n.983_984insTTGCT | non_coding_transcript_exon_variant | 0.75 |
rrl | 1474658 | n.1001A>T | non_coding_transcript_exon_variant | 0.8 |
rrl | 1474663 | n.1006C>T | non_coding_transcript_exon_variant | 0.8 |
rrl | 1474672 | n.1015C>T | non_coding_transcript_exon_variant | 0.44 |
rrl | 1474675 | n.1018C>T | non_coding_transcript_exon_variant | 0.44 |
rrl | 1474676 | n.1019T>C | non_coding_transcript_exon_variant | 0.44 |
rrl | 1474677 | n.1020A>G | non_coding_transcript_exon_variant | 0.44 |
rrl | 1474691 | n.1034A>T | non_coding_transcript_exon_variant | 0.38 |
rrl | 1474734 | n.1077G>A | non_coding_transcript_exon_variant | 0.5 |
rrl | 1474736 | n.1079C>T | non_coding_transcript_exon_variant | 0.5 |
rrl | 1474749 | n.1092C>T | non_coding_transcript_exon_variant | 0.43 |
rrl | 1474751 | n.1094G>A | non_coding_transcript_exon_variant | 0.43 |
rrl | 1474760 | n.1103A>G | non_coding_transcript_exon_variant | 0.6 |
rrl | 1474777 | n.1120T>C | non_coding_transcript_exon_variant | 0.75 |
rrl | 1474779 | n.1122G>A | non_coding_transcript_exon_variant | 0.75 |
rrl | 1474780 | n.1123C>T | non_coding_transcript_exon_variant | 0.6 |
rrl | 1474782 | n.1125G>A | non_coding_transcript_exon_variant | 0.6 |
rrl | 1474783 | n.1126G>A | non_coding_transcript_exon_variant | 0.6 |
rrl | 1474794 | n.1137C>T | non_coding_transcript_exon_variant | 0.6 |
rrl | 1474823 | n.1166C>G | non_coding_transcript_exon_variant | 0.6 |
rrl | 1474827 | n.1170C>T | non_coding_transcript_exon_variant | 0.5 |
rrl | 1474830 | n.1173A>T | non_coding_transcript_exon_variant | 0.5 |
rrl | 1474831 | n.1174A>G | non_coding_transcript_exon_variant | 0.5 |
rrl | 1474864 | n.1207C>T | non_coding_transcript_exon_variant | 0.6 |
rrl | 1474904 | n.1247G>C | non_coding_transcript_exon_variant | 0.5 |
rrl | 1475672 | n.2015C>T | non_coding_transcript_exon_variant | 0.67 |
rrl | 1475673 | n.2016T>C | non_coding_transcript_exon_variant | 0.67 |
rrl | 1475722 | n.2065G>T | non_coding_transcript_exon_variant | 0.96 |
rrl | 1475752 | n.2095C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475762 | n.2105G>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475763 | n.2106C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475764 | n.2107A>C | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475765 | n.2108A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475769 | n.2112_2113insC | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475869 | n.2212C>A | non_coding_transcript_exon_variant | 0.96 |
rrl | 1475881 | n.2224T>C | non_coding_transcript_exon_variant | 0.95 |
rrl | 1475883 | n.2226A>T | non_coding_transcript_exon_variant | 0.95 |
rrl | 1475898 | n.2241A>G | non_coding_transcript_exon_variant | 0.94 |
rrl | 1475899 | n.2242G>A | non_coding_transcript_exon_variant | 0.94 |
rrl | 1475916 | n.2259C>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475937 | n.2280A>T | non_coding_transcript_exon_variant | 0.94 |
rrl | 1475943 | n.2286G>A | non_coding_transcript_exon_variant | 0.94 |
rrl | 1475952 | n.2295A>G | non_coding_transcript_exon_variant | 0.94 |
rrl | 1475963 | n.2306G>T | non_coding_transcript_exon_variant | 0.92 |
rrl | 1475970 | n.2313C>T | non_coding_transcript_exon_variant | 0.92 |
rrl | 1475975 | n.2318C>T | non_coding_transcript_exon_variant | 0.85 |
rrl | 1475977 | n.2320A>G | non_coding_transcript_exon_variant | 0.82 |
rrl | 1475978 | n.2321C>T | non_coding_transcript_exon_variant | 0.82 |
rrl | 1475988 | n.2331A>G | non_coding_transcript_exon_variant | 0.83 |
rrl | 1475997 | n.2340A>G | non_coding_transcript_exon_variant | 0.83 |
rrl | 1475998 | n.2341C>T | non_coding_transcript_exon_variant | 0.83 |
rrl | 1476001 | n.2344T>C | non_coding_transcript_exon_variant | 0.77 |
rrl | 1476076 | n.2419A>G | non_coding_transcript_exon_variant | 0.33 |
rrl | 1476079 | n.2422G>A | non_coding_transcript_exon_variant | 0.33 |
rrl | 1476130 | n.2473G>A | non_coding_transcript_exon_variant | 0.45 |
rrl | 1476131 | n.2474C>T | non_coding_transcript_exon_variant | 0.45 |
rrl | 1476164 | n.2507A>G | non_coding_transcript_exon_variant | 0.5 |
rrl | 1476165 | n.2508T>A | non_coding_transcript_exon_variant | 0.5 |
rrl | 1476194 | n.2537A>G | non_coding_transcript_exon_variant | 0.57 |
rrl | 1476200 | n.2543A>T | non_coding_transcript_exon_variant | 0.57 |
rrl | 1476201 | n.2544C>T | non_coding_transcript_exon_variant | 0.57 |
rrl | 1476214 | n.2557G>T | non_coding_transcript_exon_variant | 0.57 |
rrl | 1476215 | n.2558C>T | non_coding_transcript_exon_variant | 0.57 |
rrl | 1476224 | n.2567A>G | non_coding_transcript_exon_variant | 0.5 |
rrl | 1476245 | n.2588C>T | non_coding_transcript_exon_variant | 0.29 |
rrl | 1476337 | n.2680C>T | non_coding_transcript_exon_variant | 0.64 |
rrl | 1476359 | n.2702C>G | non_coding_transcript_exon_variant | 0.84 |
rrl | 1476381 | n.2724G>C | non_coding_transcript_exon_variant | 0.86 |
rrl | 1476428 | n.2771C>T | non_coding_transcript_exon_variant | 0.93 |
rrl | 1476429 | n.2772A>T | non_coding_transcript_exon_variant | 0.95 |
rrl | 1476466 | n.2809C>T | non_coding_transcript_exon_variant | 0.79 |
rrl | 1476481 | n.2824T>C | non_coding_transcript_exon_variant | 0.77 |
rrl | 1476506 | n.2849T>C | non_coding_transcript_exon_variant | 0.38 |
rpsA | 1833734 | p.Ala65Ser | missense_variant | 0.16 |
rpsA | 1833742 | c.201A>G | synonymous_variant | 0.16 |
rpsA | 1833761 | p.Val74Ile | missense_variant | 0.15 |
rpsA | 1833769 | c.228C>G | synonymous_variant | 0.14 |
rpsA | 1833770 | p.Asn77Asp | missense_variant | 0.14 |
rpsA | 1833782 | p.Ser81Ala | missense_variant | 0.12 |
rpsA | 1833787 | c.246C>G | synonymous_variant | 0.12 |
rpsA | 1833793 | c.252C>T | synonymous_variant | 0.18 |
rpsA | 1833802 | c.261A>G | synonymous_variant | 0.21 |
rpsA | 1833805 | c.264C>T | synonymous_variant | 0.21 |
rpsA | 1833811 | c.270G>C | synonymous_variant | 0.22 |
rpsA | 1833829 | c.288A>G | synonymous_variant | 0.15 |
rpsA | 1833832 | c.291G>A | synonymous_variant | 0.16 |
rpsA | 1833838 | c.297G>C | synonymous_variant | 0.16 |
rpsA | 1833841 | c.300C>G | synonymous_variant | 0.16 |
rpsA | 1833847 | c.306C>G | synonymous_variant | 0.16 |
rpsA | 1833856 | c.315A>G | synonymous_variant | 0.18 |
rpsA | 1833874 | c.333T>C | synonymous_variant | 0.18 |
rpsA | 1833928 | c.387G>C | synonymous_variant | 0.25 |
rpsA | 1833949 | c.408T>C | synonymous_variant | 0.28 |
rpsA | 1833955 | c.414G>C | synonymous_variant | 0.28 |
rpsA | 1833961 | c.420C>G | synonymous_variant | 0.27 |
rpsA | 1833979 | c.438T>C | synonymous_variant | 0.51 |
rpsA | 1833988 | c.447C>G | synonymous_variant | 0.57 |
rpsA | 1833994 | c.453G>C | synonymous_variant | 0.6 |
rpsA | 1834012 | c.471G>C | synonymous_variant | 0.64 |
rpsA | 1834039 | c.498C>G | synonymous_variant | 0.6 |
rpsA | 1834040 | p.Lys167Gln | missense_variant | 0.6 |
rpsA | 1834043 | p.Glu168Lys | missense_variant | 0.6 |
rpsA | 1834093 | c.552G>C | synonymous_variant | 0.35 |
rpsA | 1834114 | c.573G>C | synonymous_variant | 0.17 |
rpsA | 1834189 | c.648G>C | synonymous_variant | 0.15 |
rpsA | 1834195 | c.654G>C | synonymous_variant | 0.31 |
rpsA | 1834213 | c.672G>C | synonymous_variant | 0.35 |
rpsA | 1834219 | c.678C>G | synonymous_variant | 0.35 |
rpsA | 1834222 | c.681T>C | synonymous_variant | 0.35 |
rpsA | 1834225 | c.684C>G | synonymous_variant | 0.36 |
rpsA | 1834231 | c.690T>G | synonymous_variant | 0.42 |
rpsA | 1834234 | c.693G>C | synonymous_variant | 0.48 |
rpsA | 1834240 | c.699T>C | synonymous_variant | 0.49 |
rpsA | 1834249 | c.708T>C | synonymous_variant | 0.58 |
rpsA | 1834261 | c.720A>G | synonymous_variant | 0.6 |
rpsA | 1834264 | c.723G>C | synonymous_variant | 0.61 |
rpsA | 1834285 | c.744G>C | synonymous_variant | 0.55 |
rpsA | 1834294 | c.753G>C | synonymous_variant | 0.45 |
rpsA | 1834298 | p.Gln253Glu | missense_variant | 0.44 |
rpsA | 1834303 | c.762T>C | synonymous_variant | 0.43 |
rpsA | 1834306 | c.765T>C | synonymous_variant | 0.43 |
rpsA | 1834307 | p.Asp256Gln | missense_variant | 0.43 |
rpsA | 1834333 | p.Asp264Glu | missense_variant | 0.45 |
rpsA | 1834336 | c.795C>G | synonymous_variant | 0.41 |
rpsA | 1834348 | c.807T>C | synonymous_variant | 0.31 |
rpsA | 1834354 | c.813G>C | synonymous_variant | 0.23 |
rpsA | 1834357 | c.816T>G | synonymous_variant | 0.24 |
rpsA | 1834360 | c.819G>C | synonymous_variant | 0.26 |
rpsA | 1834361 | c.820T>C | synonymous_variant | 0.24 |
rpsA | 1834366 | c.825A>C | synonymous_variant | 0.23 |
rpsA | 1834369 | c.828C>G | synonymous_variant | 0.22 |
rpsA | 1834375 | c.834G>C | synonymous_variant | 0.23 |
rpsA | 1834378 | c.837T>C | synonymous_variant | 0.24 |
rpsA | 1834395 | p.Arg285Gln | missense_variant | 0.25 |
rpsA | 1834397 | p.His286Thr | missense_variant | 0.2 |
rpsA | 1834435 | c.894G>C | synonymous_variant | 0.13 |
rpsA | 1834451 | c.910T>C | synonymous_variant | 0.15 |
rpsA | 1834456 | c.915T>G | synonymous_variant | 0.16 |
rpsA | 1834459 | c.918G>C | synonymous_variant | 0.15 |
rpsA | 1834465 | c.924T>C | synonymous_variant | 0.16 |
rpsA | 1834468 | c.927A>G | synonymous_variant | 0.17 |
rpsA | 1834474 | c.933C>G | synonymous_variant | 0.19 |
rpsA | 1834480 | c.939C>G | synonymous_variant | 0.18 |
rpsA | 1834486 | p.Glu315Asp | missense_variant | 0.18 |
rpsA | 1834489 | c.948T>C | synonymous_variant | 0.17 |
rpsA | 1834498 | c.957C>T | synonymous_variant | 0.2 |
rpsA | 1834524 | p.Glu328Val | missense_variant | 0.16 |
rpsA | 1834528 | c.987T>C | synonymous_variant | 0.13 |
tlyA | 1917972 | c.33A>G | synonymous_variant | 1.0 |
katG | 2154724 | p.Arg463Leu | missense_variant | 1.0 |
PPE35 | 2167926 | p.Leu896Ser | missense_variant | 1.0 |
PPE35 | 2168604 | p.Pro670Leu | missense_variant | 1.0 |
Rv1979c | 2223293 | c.-129A>G | upstream_gene_variant | 1.0 |
pncA | 2289047 | c.195C>T | synonymous_variant | 1.0 |
pncA | 2289365 | c.-125delC | upstream_gene_variant | 1.0 |
pncA | 2289905 | c.-664T>C | upstream_gene_variant | 0.12 |
ahpC | 2726105 | c.-88G>A | upstream_gene_variant | 1.0 |
pepQ | 2860575 | c.-157G>C | upstream_gene_variant | 1.0 |
ald | 3086788 | c.-32T>C | upstream_gene_variant | 1.0 |
Rv3083 | 3449236 | c.733A>C | synonymous_variant | 1.0 |
fprA | 3473996 | c.-11_-10insA | upstream_gene_variant | 1.0 |
rpoA | 3878331 | c.177A>G | synonymous_variant | 0.14 |
rpoA | 3878334 | c.174T>C | synonymous_variant | 0.14 |
rpoA | 3878337 | c.171T>C | synonymous_variant | 0.14 |
rpoA | 3878346 | c.162T>C | synonymous_variant | 0.16 |
rpoA | 3878355 | c.153C>G | synonymous_variant | 0.16 |
rpoA | 3878361 | c.147G>C | synonymous_variant | 0.16 |
rpoA | 3878364 | c.144A>C | synonymous_variant | 0.16 |
rpoA | 3878370 | c.138T>C | synonymous_variant | 0.16 |
clpC1 | 4038860 | c.1845G>C | synonymous_variant | 0.36 |
clpC1 | 4038875 | c.1830C>G | synonymous_variant | 0.27 |
clpC1 | 4038878 | c.1827A>G | synonymous_variant | 0.32 |
clpC1 | 4038905 | c.1800A>G | synonymous_variant | 0.23 |
clpC1 | 4038911 | c.1794G>C | synonymous_variant | 0.23 |
clpC1 | 4038917 | c.1788C>G | synonymous_variant | 0.15 |
clpC1 | 4038923 | c.1782A>G | synonymous_variant | 0.15 |
clpC1 | 4039817 | c.888A>C | synonymous_variant | 0.34 |
clpC1 | 4039820 | c.885T>G | synonymous_variant | 0.34 |
clpC1 | 4039823 | c.882T>G | synonymous_variant | 0.34 |
clpC1 | 4039829 | c.874_876delTTGinsCTC | synonymous_variant | 0.36 |
clpC1 | 4039838 | p.Leu289Ile | missense_variant | 0.36 |
clpC1 | 4039844 | c.861C>T | synonymous_variant | 0.38 |
clpC1 | 4039850 | c.855T>C | synonymous_variant | 0.38 |
clpC1 | 4039865 | c.840T>G | synonymous_variant | 0.36 |
clpC1 | 4039875 | p.Asn277Arg | missense_variant | 0.36 |
clpC1 | 4039898 | c.807C>G | synonymous_variant | 0.29 |
clpC1 | 4039901 | c.804C>G | synonymous_variant | 0.2 |
clpC1 | 4039904 | c.801A>G | synonymous_variant | 0.19 |
clpC1 | 4039916 | c.789T>C | synonymous_variant | 0.22 |
clpC1 | 4039925 | c.780C>G | synonymous_variant | 0.21 |
clpC1 | 4039929 | c.775_776delAGinsTC | synonymous_variant | 0.22 |
clpC1 | 4039931 | c.774T>C | synonymous_variant | 0.22 |
clpC1 | 4039934 | c.771G>C | synonymous_variant | 0.24 |
clpC1 | 4039943 | c.762G>C | synonymous_variant | 0.22 |
clpC1 | 4039946 | c.759A>C | synonymous_variant | 0.22 |
clpC1 | 4039949 | c.756G>C | synonymous_variant | 0.21 |
clpC1 | 4039952 | c.753T>C | synonymous_variant | 0.24 |
clpC1 | 4039958 | c.747G>C | synonymous_variant | 0.4 |
clpC1 | 4039967 | p.Gln246His | missense_variant | 0.56 |
clpC1 | 4039979 | c.726C>G | synonymous_variant | 0.51 |
clpC1 | 4039982 | c.723G>C | synonymous_variant | 0.48 |
clpC1 | 4039988 | c.717C>G | synonymous_variant | 0.45 |
clpC1 | 4039991 | c.714G>C | synonymous_variant | 0.45 |
clpC1 | 4039994 | p.Glu237Asp | missense_variant | 0.48 |
clpC1 | 4039997 | c.708C>G | synonymous_variant | 0.48 |
clpC1 | 4040001 | p.His235Arg | missense_variant | 0.51 |
clpC1 | 4040015 | c.690G>C | synonymous_variant | 0.62 |
clpC1 | 4040021 | c.684A>C | synonymous_variant | 0.63 |
clpC1 | 4040024 | c.681A>G | synonymous_variant | 0.65 |
clpC1 | 4040027 | c.678C>G | synonymous_variant | 0.65 |
clpC1 | 4040033 | c.672G>C | synonymous_variant | 0.65 |
clpC1 | 4040063 | c.642G>C | synonymous_variant | 0.62 |
clpC1 | 4040069 | c.636G>C | synonymous_variant | 0.57 |
clpC1 | 4040090 | c.615T>C | synonymous_variant | 0.59 |
clpC1 | 4040093 | c.612C>G | synonymous_variant | 0.58 |
clpC1 | 4040114 | p.Ile197Met | missense_variant | 0.26 |
clpC1 | 4040117 | c.588A>G | synonymous_variant | 0.23 |
clpC1 | 4040123 | p.Glu194Phe | missense_variant | 0.23 |
clpC1 | 4040129 | c.576C>G | synonymous_variant | 0.24 |
clpC1 | 4040135 | c.570C>G | synonymous_variant | 0.24 |
clpC1 | 4040147 | c.558A>G | synonymous_variant | 0.19 |
embC | 4242075 | p.Arg738Gln | missense_variant | 1.0 |
embA | 4242643 | c.-590C>T | upstream_gene_variant | 1.0 |
whiB6 | 4338595 | c.-75delG | upstream_gene_variant | 1.0 |
gid | 4407588 | c.615A>G | synonymous_variant | 1.0 |