Rv0668 - c.948C>G


Drug resistance types
30 Sensitive 9 RR-TB 53 HR-TB 18 MDR-TB 4 Pre-XDR-TB 1 XDR-TB 66 Other
lineage Counts
lineage Count
lineage3 3
lineage4.9 73
lineage4.9;lineage9 3
La1.7.1;La1.7.X-unk4 1
La1.7;lineage4.9 4
lineage2.1;lineage4.3.2;lineage4.9 1
M.canetti;lineage4.9 5
La2;lineage4.9;lineage9 1
lineage4.1.2.1 8
lineage4.6.1.1 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage2.2.1 13
lineage2.2.1.2 2
La1;lineage4.9 1
lineage4.3.2;lineage4.9 1
lineage1;lineage4.9 2
lineage4 4
lineage1.1.1 1
lineage4.5 2
lineage2.2 4
lineage4.3.4 1
M.canetti;lineage4.9;lineage9 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage4.6.3;lineage4.9 1
lineage4.8 2
lineage4.2;lineage4.8.1;lineage4.9 2
M.canetti;lineage1 1
lineage4.4.2 1
lineage2.2.1.1 4
La1.7.1;La1.7.X-unk4;lineage7 1
lineage4.9;lineage7 2
lineage6.1.3 1
3
lineage4.2;lineage4.9 3
lineage4.1.1.3;lineage4.9 1
lineage4.9;lineage6.3 1
lineage2.2.1.2;lineage7 1
M.canetti;lineage4.2;lineage4.9 1
lineage4.1;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage4.1.1.3 1
La1.7.X-unk4;lineage4.9 1
La1.7.1 1
lineage3.1.2.1 1
lineage2.1;lineage4.9 1
La1.7;M.canetti;lineage4.9 2
lineage1.1.2 1
lineage3.1.2.2 1
La3;lineage4.3.4 1
La1.7.1;lineage4.9 1
lineage2.2.1;lineage3;lineage4 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La3;lineage4.9 1
lineage3.1;lineage9 1
lineage3.1.2.1;lineage3.1.2.2 1
La2;lineage4.9 1
lineage4.6.3;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 181
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR29097004 Other lineage3 None
SRR6045526 Other lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR2446566 Other lineage4.9 None
ERR373945 Sensitive lineage4.9 None
SRR6045347 Other lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
SRR11662694 Other lineage4.9 None
SRR22424787 Sensitive lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR161037 Other lineage4.9 None
SRR3675248 Other lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR4814639 HR-TB lineage4.9 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR212138 HR-TB lineage4.9 None
ERR4816466 HR-TB lineage4.9 None
SRR3675387 Other lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
SRR7535047 RR-TB lineage4.6.1.1 None
SRR3675229 Sensitive lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR14782405 HR-TB lineage4.9 None
SRR1180172 Other lineage2.2.1 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR12416840 MDR-TB lineage4.9 None
ERR373947 Other lineage4.9 None
ERR212125 HR-TB lineage4.9 None
SRR1183144 Other lineage2.2.1 None
SRR1183145 Other lineage2.2.1 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR6359082 Other lineage4.9 None
ERR4815815 Sensitive lineage4.9 None
SRR6045233 Other M.canetti;lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR4797313 Sensitive lineage2.2.1 None
ERR176778 HR-TB lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
ERR4798823 HR-TB lineage4 None
ERR4819314 Other lineage1.1.1 None
SRR1172310 HR-TB lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR4811031 Sensitive lineage4.5 None
SRR3675270 Other lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
ERR736817 HR-TB lineage4.3.4 None
SRR12142339 HR-TB lineage2.2.1 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR369151 Other lineage4.9 None
SRR5535933 Other lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
SRR6046046 Other lineage4.9 None
ERR4817667 HR-TB lineage4.8 None
ERR4178309 Other lineage4.1.2.1 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR20969731 Other lineage2.2.1 None
SRR14782054 Other lineage4.9 None
ERR181887 Other lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR400345 Other lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR6865502 Sensitive lineage4 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
SRR6046245 Other lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SRR6044942 HR-TB lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
ERR176779 HR-TB lineage4.9 None
DRR188519 Other lineage4.4.2 None
SRR1181091 Other lineage2.2.1.1 None
ERR4812155 Other lineage4.9 None
SRR3675449 Other M.canetti;lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR1023236 Other lineage6.1.3 None
SRR1184024 RR-TB lineage2.2.1.1 None
ERR9786656 Sensitive lineage4.1.2.1 None
SRR1180147 Other lineage2.2.1.1 None
SRR29017081 Sensitive lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR1180270 Other lineage2.2.1 None
SRR11662690 HR-TB lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR2514692 Other None
ERR369156 Sensitive lineage4.9 None
ERR4829606 Sensitive lineage4.1.2.1 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR736875 HR-TB lineage4.9 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
SRR6046878 Other lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR1063858 HR-TB lineage4.9 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
ERR4816762 Sensitive lineage4.9 None
ERR176651 Other lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR752229 Other lineage4.5 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR400320 Sensitive lineage4.9 None
ERR550636 MDR-TB lineage4.1.1.3 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
ERR4816717 RR-TB lineage3.1.2.1 None
SRR6045053 Other lineage4 None
SRR20969708 HR-TB lineage2.2 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR3675279 Sensitive lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR5341330 Other lineage4.9 None
ERR212123 Other lineage4.9 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR7898221 MDR-TB lineage1.1.2 None
ERR4178226 Sensitive lineage4 None
ERR4769450 Other lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR4798504 RR-TB lineage3 None
ERR6865513 Other lineage4.1.2.1 None
ERR1063862 HR-TB lineage4.9 None
ERR400336 Sensitive lineage4.9 None
ERR3283021 HR-TB lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR25827605 Pre-XDR-TB lineage2.2.1;lineage3;lineage4 None
ERR11465232 Sensitive lineage4.1.2.1 None
ERR3797047 MDR-TB lineage4.9 None
ERR473332 Other lineage4.9 None
ERR2660539 Other lineage4.9 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
ERR4769452 Other lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
ERR502470 RR-TB lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR369157 Sensitive lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR987722 MDR-TB None
SRR10808730 Other lineage4.9 None
ERR181824 HR-TB lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
ERR3445502 Sensitive lineage4.9;lineage7 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR6045217 Sensitive lineage4.9 None
ERR4796577 HR-TB None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR181744 HR-TB La3;lineage4.9 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
SRR6045359 Sensitive lineage4.9 None
ERR4811030 Sensitive lineage4.9 None
SRR1175127 Other lineage2.2.1.2 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
SAMN02585910 Other lineage2.2.1 None
SRR3675522 Other lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR323039 HR-TB La2;lineage4.9 None
SRR6045548 Sensitive lineage4.9 None
ERR363506 Sensitive lineage4.9 None
SRR1181251 Other lineage2.2.1 None
ERR108125 RR-TB lineage4.9 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR4799025 Other lineage4.8 None
SRR6046492 Other lineage4.9 None