Rv0668 - c.948C>G


Drug resistance types
30 Sensitive 9 RR-TB 53 HR-TB 18 MDR-TB 4 Pre-XDR-TB 1 XDR-TB 66 Other
lineage Counts
lineage Count
lineage4.2;lineage4.9 3
lineage4.9 73
lineage2.2 4
La1.7;lineage4.9 4
lineage4.9;lineage7 2
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.1.1.3;lineage4.9 1
lineage1;lineage4.9 2
lineage1.1.1 1
lineage3.1;lineage9 1
M.canetti;lineage4.2;lineage4.9 1
lineage4.1;lineage4.9 1
lineage4.5 2
lineage3.1.2.1;lineage3.1.2.2 1
lineage4.1.1.3 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La1.7.1 1
lineage4 4
M.canetti;lineage4.9 5
lineage2.2.1 13
lineage4.9;lineage9 3
lineage1.1.2 1
lineage3.1.2.2 1
La3;lineage4.3.4 1
lineage4.1.2.1 8
lineage2.1;lineage4.3.2;lineage4.9 1
lineage2.2.1.2 2
lineage2.2.1.1 4
lineage3 3
3
lineage4.9;lineage6.3 1
lineage2.2.1.2;lineage7 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
M.canetti;lineage4.9;lineage9 1
lineage3.1.2.1 1
La2;lineage4.9 1
lineage4.6.3;lineage4.9;lineage6.3 1
La1.7;M.canetti;lineage4.9 2
lineage4.2;lineage4.8.1;lineage4.9 2
M.canetti;lineage1 1
La1.7.1;lineage4.9 1
lineage6.1.3 1
La1;lineage4.9 1
lineage4.3.2;lineage4.9 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La3;lineage4.9 1
lineage4.3.4 1
La1.7.X-unk4;lineage4.9 1
lineage4.6.3;lineage4.9 1
lineage4.8 2
lineage2.1;lineage4.9 1
La1.7.1;La1.7.X-unk4 1
lineage4.4.2 1
La2;lineage4.9;lineage9 1
lineage2.2.1;lineage3;lineage4 1
lineage4.6.1.1 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
La1.7.1;La1.7.X-unk4;lineage7 1
spoligotype Counts
spoligotype Count
None 181
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR3445502 Sensitive lineage4.9;lineage7 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
SRR6046878 Other lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
ERR4819314 Other lineage1.1.1 None
ERR176651 Other lineage4.9 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
SRR6045359 Sensitive lineage4.9 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR550636 MDR-TB lineage4.1.1.3 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR1792478 HR-TB La1.7.1 None
SRR6045053 Other lineage4 None
SRR20969708 HR-TB lineage2.2 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR6045548 Sensitive lineage4.9 None
ERR181887 Other lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR373945 Sensitive lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR7898221 MDR-TB lineage1.1.2 None
ERR4178226 Sensitive lineage4 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR216938 HR-TB La1.7;lineage4.9 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR6865513 Other lineage4.1.2.1 None
SRR6046245 Other lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR1063862 HR-TB lineage4.9 None
ERR400336 Sensitive lineage4.9 None
ERR3283021 HR-TB lineage4.9 None
ERR176779 HR-TB lineage4.9 None
ERR4816466 HR-TB lineage4.9 None
SRR3675387 Other lineage4.9 None
ERR11465232 Sensitive lineage4.1.2.1 None
SRR3675229 Sensitive lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
SRR1180172 Other lineage2.2.1 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR12416840 MDR-TB lineage4.9 None
SRR1184024 RR-TB lineage2.2.1.1 None
ERR502470 RR-TB lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR176560 HR-TB La1.7;lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR987722 MDR-TB None
SRR10808730 Other lineage4.9 None
ERR369156 Sensitive lineage4.9 None
ERR4829606 Sensitive lineage4.1.2.1 None
ERR3283055 HR-TB lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
SRR6045217 Sensitive lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR1063858 HR-TB lineage4.9 None
ERR4798823 HR-TB lineage4 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR752229 Other lineage4.5 None
ERR4811030 Sensitive lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR4810624 MDR-TB lineage2.2 None
SRR1175127 Other lineage2.2.1.2 None
SAMN02585910 Other lineage2.2.1 None
SRR12142339 HR-TB lineage2.2.1 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR369151 Other lineage4.9 None
ERR400320 Sensitive lineage4.9 None
SRR5535933 Other lineage4.9 None
ERR4816717 RR-TB lineage3.1.2.1 None
ERR323039 HR-TB La2;lineage4.9 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR20969731 Other lineage2.2.1 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR6045526 Other lineage4.9 None
ERR2446566 Other lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR400345 Other lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR6865502 Sensitive lineage4 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SRR11662694 Other lineage4.9 None
ERR4798504 RR-TB lineage3 None
ERR161037 Other lineage4.9 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SRR6044942 HR-TB lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR212138 HR-TB lineage4.9 None
SRR1181091 Other lineage2.2.1.1 None
ERR4812155 Other lineage4.9 None
ERR3797047 MDR-TB lineage4.9 None
ERR2660539 Other lineage4.9 None
ERR1023236 Other lineage6.1.3 None
ERR373947 Other lineage4.9 None
ERR212125 HR-TB lineage4.9 None
ERR9786656 Sensitive lineage4.1.2.1 None
SRR1180147 Other lineage2.2.1.1 None
SRR29017081 Sensitive lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR1180270 Other lineage2.2.1 None
ERR4815815 Sensitive lineage4.9 None
SRR6045233 Other M.canetti;lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
ERR2514692 Other None
ERR181824 HR-TB lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR4797313 Sensitive lineage2.2.1 None
ERR176778 HR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
ERR4796577 HR-TB None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR4816762 Sensitive lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
SRR9971114 Other lineage2.2.1 None
SRR3675270 Other lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
SRR3675522 Other lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
SRR6046046 Other lineage4.9 None
ERR4817667 HR-TB lineage4.8 None
ERR4178309 Other lineage4.1.2.1 None
ERR363506 Sensitive lineage4.9 None
SRR3675279 Sensitive lineage4.9 None
SRR1181251 Other lineage2.2.1 None
ERR108125 RR-TB lineage4.9 None
ERR4799025 Other lineage4.8 None
SRR6046492 Other lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR29097004 Other lineage3 None
SRR14782054 Other lineage4.9 None
SRR5341330 Other lineage4.9 None
ERR212123 Other lineage4.9 None
SRR6045347 Other lineage4.9 None
SRR22424787 Sensitive lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR3675248 Other lineage4.9 None
ERR4814639 HR-TB lineage4.9 None
SRR6045399 Other M.canetti;lineage4.9 None
DRR188519 Other lineage4.4.2 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR25827605 Pre-XDR-TB lineage2.2.1;lineage3;lineage4 None
SRR8217918 HR-TB lineage4.9 None
SRR7535047 RR-TB lineage4.6.1.1 None
ERR1063849 HR-TB lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR3675449 Other M.canetti;lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR473332 Other lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
ERR4769452 Other lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
SRR1183111 HR-TB lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR369157 Sensitive lineage4.9 None
SRR1183144 Other lineage2.2.1 None
SRR1183145 Other lineage2.2.1 None
ERR6359082 Other lineage4.9 None