TB-Profiler result

Run: ERR9786656
Summary

Run ID: ERR9786656

Sample name:

Date: 2025-09-15T15:41:01.024796

Number of reads: 5192292

Percentage reads mapped: 85.46

Median coverage: 207.0

Strain: lineage4.1.2.1

Spoligotype:

Drug-resistance: Sensitive

Download CSV Download TXT Download JSON
Lineage Table: The lineage is inferred by analysing lineage specific SNPs
Lineage Family RDs Frequency
lineage4 Euro-American None 100.0
lineage4.1 Euro-American None 100.0
lineage4.1.2 Euro-American None 100.0
lineage4.1.2.1 Euro-American (Haarlem) RD182 99.33
Drug resistance: This table reports drug-resistance associated mutations found in known resistance genes
Drug Resistance Supporting mutations WHO confidence Comment
rifampicin
isoniazid
ethambutol
pyrazinamide
streptomycin
fluoroquinolones
moxifloxacin
ofloxacin
levofloxacin
ciprofloxacin
aminoglycosides
amikacin
capreomycin
kanamycin
cycloserine
ethionamide
clofazimine
para-aminosalicylic_acid
delamanid
bedaquiline
linezolid
Drug resistance-Associated Mutations: This table reports mutations found in candidate resistance genes which have been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs Confidence Comment
Non-Associated Mutations: This table reports mutations found in candidate resistance genes which have not been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs Confidence
gyrA 7362 p.Glu21Gln missense_variant 1.0 levofloxacin Not assoc w R
moxifloxacin Not assoc w R
gyrA 7585 p.Ser95Thr missense_variant 1.0 levofloxacin Not assoc w R
moxifloxacin Not assoc w R
gyrA 7661 c.360C>T synonymous_variant 0.15 levofloxacin Uncertain significance
moxifloxacin Uncertain significance
gyrA 8693 c.1392T>C synonymous_variant 0.15 levofloxacin Uncertain significance
moxifloxacin Uncertain significance
gyrA 8903 c.1602T>C synonymous_variant 0.16 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8990 c.1689C>G synonymous_variant 0.17 levofloxacin Uncertain significance
moxifloxacin Uncertain significance
gyrA 9304 p.Gly668Asp missense_variant 1.0 levofloxacin Not assoc w R
moxifloxacin Not assoc w R
gyrA 9365 c.2064G>A synonymous_variant 0.17 levofloxacin Uncertain significance
moxifloxacin Uncertain significance
gyrA 9374 c.2073G>T synonymous_variant 0.17 levofloxacin Uncertain significance
moxifloxacin Uncertain significance
gyrA 9377 c.2076A>G synonymous_variant 0.17 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 9383 c.2082T>C synonymous_variant 0.17 levofloxacin Uncertain significance
moxifloxacin Uncertain significance
gyrA 9386 c.2085T>C synonymous_variant 0.17 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 9398 c.2097T>C synonymous_variant 0.16 levofloxacin Uncertain significance
moxifloxacin Uncertain significance
fgd1 491007 c.225G>C synonymous_variant 0.16 clofazimine Uncertain significance
delamanid Uncertain significance
pretomanid Uncertain significance
fgd1 491013 c.231C>G synonymous_variant 0.16 clofazimine Uncertain significance
delamanid Uncertain significance
pretomanid Uncertain significance
fgd1 491022 c.240C>G synonymous_variant 0.16 clofazimine Uncertain significance
delamanid Uncertain significance
pretomanid Uncertain significance
fgd1 491043 c.261T>C synonymous_variant 0.16 clofazimine Uncertain significance
delamanid Uncertain significance
pretomanid Uncertain significance
fgd1 491049 c.267T>A synonymous_variant 0.16 clofazimine Uncertain significance
delamanid Uncertain significance
pretomanid Uncertain significance
fgd1 491097 c.315G>C synonymous_variant 0.16 clofazimine Uncertain significance
delamanid Uncertain significance
pretomanid Uncertain significance
fgd1 491591 p.Lys270Met missense_variant 0.9 clofazimine Not assoc w R
delamanid Uncertain significance
pretomanid Uncertain significance
mshA 575659 c.312A>G synonymous_variant 0.16 ethionamide Uncertain significance
isoniazid Uncertain significance
mshA 575674 c.327G>C synonymous_variant 0.18 ethionamide Uncertain significance
isoniazid Uncertain significance
mshA 575679 p.Asn111Ser missense_variant 0.83 ethionamide Not assoc w R
isoniazid Not assoc w R
mshA 575683 c.336G>C synonymous_variant 0.18 ethionamide Uncertain significance
isoniazid Uncertain significance
mshA 575692 c.345G>C synonymous_variant 0.18 ethionamide Uncertain significance
isoniazid Uncertain significance
mshA 575695 c.348C>G synonymous_variant 0.18 ethionamide Uncertain significance
isoniazid Not assoc w R - Interim
mshA 575704 c.357T>C synonymous_variant 0.17 ethionamide Uncertain significance
isoniazid Uncertain significance
mshA 575705 c.358T>C synonymous_variant 0.17 ethionamide Uncertain significance
isoniazid Uncertain significance
mshA 575812 c.465C>T synonymous_variant 0.19 ethionamide Uncertain significance
isoniazid Uncertain significance
mshA 575821 c.474G>C synonymous_variant 0.2 ethionamide Uncertain significance
isoniazid Uncertain significance
mshA 575824 c.477T>A synonymous_variant 0.21 ethionamide Uncertain significance
isoniazid Uncertain significance
mshA 575833 c.486C>T synonymous_variant 0.21 ethionamide Not assoc w R - Interim
isoniazid Not assoc w R - Interim
mshA 575845 c.498C>G synonymous_variant 0.21 ethionamide Uncertain significance
isoniazid Uncertain significance
Rv0565c 657269 p.Ser68Pro missense_variant 0.91 ethionamide Uncertain significance
hadA 732389 p.Ser154Thr missense_variant 0.15 isoniazid Uncertain significance
hadA 732398 p.Ala157Thr missense_variant 0.15 isoniazid Uncertain significance
nusG 734460 c.207G>T synonymous_variant 0.15 rifampicin Not assoc w R - Interim
nusG 734532 c.279A>G synonymous_variant 0.18 rifampicin Not assoc w R - Interim
nusG 734538 c.285C>T synonymous_variant 0.17 rifampicin Not assoc w R - Interim
nusG 734541 c.288A>G synonymous_variant 0.18 rifampicin Not assoc w R - Interim
nusG 734559 c.306T>C synonymous_variant 0.19 rifampicin Uncertain significance
nusG 734580 c.327T>C synonymous_variant 0.19 rifampicin Not assoc w R - Interim
nusG 734589 c.336G>C synonymous_variant 0.2 rifampicin Uncertain significance
nusG 734596 c.343T>C synonymous_variant 0.2 rifampicin Uncertain significance
nusG 734625 c.372T>C synonymous_variant 0.17 rifampicin Uncertain significance
nusG 734631 c.378G>C synonymous_variant 0.2 rifampicin Uncertain significance
nusG 734637 c.384G>C synonymous_variant 0.2 rifampicin Uncertain significance
nusG 734643 c.390G>C synonymous_variant 0.21 rifampicin Uncertain significance
nusG 734646 c.393G>A synonymous_variant 0.2 rifampicin Uncertain significance
nusG 734652 c.399T>C synonymous_variant 0.2 rifampicin Uncertain significance
nusG 734658 c.405A>G synonymous_variant 0.2 rifampicin Not assoc w R
nusG 734661 c.408A>C synonymous_variant 0.19 rifampicin Uncertain significance
nusG 734664 c.411T>G synonymous_variant 0.19 rifampicin Uncertain significance
nusG 734673 c.420A>G synonymous_variant 0.2 rifampicin Uncertain significance
nusG 734679 c.426C>G synonymous_variant 0.2 rifampicin Not assoc w R - Interim
nusG 734680 p.Ala143Thr missense_variant 0.2 rifampicin Uncertain significance
nusG 734703 c.450T>C synonymous_variant 0.21 rifampicin Uncertain significance
nusG 734709 c.456T>G synonymous_variant 0.2 rifampicin Uncertain significance
nusG 734715 c.462G>C synonymous_variant 0.18 rifampicin Uncertain significance
nusG 734718 c.465G>C synonymous_variant 0.18 rifampicin Uncertain significance
nusG 734719 p.Ser156Thr missense_variant 0.19 rifampicin Uncertain significance
nusG 734726 p.Arg158Lys missense_variant 0.2 rifampicin Uncertain significance
nusG 734733 c.480T>C synonymous_variant 0.2 rifampicin Uncertain significance
nusG 734750 p.Ser166Thr missense_variant 0.19 rifampicin Uncertain significance
nusG 734757 c.504T>C synonymous_variant 0.19 rifampicin Uncertain significance
nusG 734771 p.Ala173Val missense_variant 0.17 rifampicin Uncertain significance
nusG 734787 c.534T>C synonymous_variant 0.16 rifampicin Uncertain significance
nusG 734792 p.Val180Ala missense_variant 0.15 rifampicin Uncertain significance
nusG 734794 p.Val181Ile missense_variant 0.15 rifampicin Uncertain significance
rpoB 760085 c.279C>T synonymous_variant 0.15 rifampicin Not assoc w R - Interim
rpoB 760115 c.309C>T synonymous_variant 0.86 rifampicin Not assoc w R
rpoB 760181 c.375T>A synonymous_variant 0.15 rifampicin Uncertain significance
rpoB 760196 c.390C>G synonymous_variant 0.18 rifampicin Not assoc w R - Interim
rpoB 760235 c.429T>C synonymous_variant 0.18 rifampicin Not assoc w R - Interim
rpoB 760244 c.438G>C synonymous_variant 0.17 rifampicin Not assoc w R - Interim
rpoB 760274 c.468G>A synonymous_variant 0.2 rifampicin Uncertain significance
rpoB 760283 c.477G>C synonymous_variant 0.19 rifampicin Not assoc w R - Interim
rpoB 760328 c.522G>C synonymous_variant 0.22 rifampicin Uncertain significance
rpoB 760331 c.525G>C synonymous_variant 0.21 rifampicin Uncertain significance
rpoB 760337 c.531C>G synonymous_variant 0.21 rifampicin Uncertain significance
rpoB 760340 c.534G>C synonymous_variant 0.21 rifampicin Uncertain significance
rpoB 760361 c.555T>C synonymous_variant 0.2 rifampicin Not assoc w R - Interim
rpoB 760370 c.564C>G synonymous_variant 0.19 rifampicin Uncertain significance
rpoB 760376 p.Asp190Glu missense_variant 0.19 rifampicin Uncertain significance
rpoB 760380 p.Thr192Leu missense_variant 0.18 rifampicin Uncertain significance
rpoB 760415 c.609C>T synonymous_variant 0.22 rifampicin Not assoc w R - Interim
rpoB 760424 c.618C>G synonymous_variant 0.21 rifampicin Not assoc w R - Interim
rpoB 760430 c.624T>C synonymous_variant 0.22 rifampicin Not assoc w R - Interim
rpoB 760463 c.657C>T synonymous_variant 0.19 rifampicin Not assoc w R - Interim
rpoB 760475 c.669A>G synonymous_variant 0.18 rifampicin Not assoc w R - Interim
rpoB 760481 c.675G>C synonymous_variant 0.17 rifampicin Not assoc w R - Interim
rpoB 760484 c.678A>G synonymous_variant 0.17 rifampicin Not assoc w R - Interim
rpoB 760487 c.681G>C synonymous_variant 0.18 rifampicin Uncertain significance
rpoB 760496 c.690G>A synonymous_variant 0.23 rifampicin Uncertain significance
rpoB 760520 c.714C>G synonymous_variant 0.17 rifampicin Uncertain significance
rpoB 760522 p.Ser239Asn missense_variant 0.17 rifampicin Uncertain significance
rpoB 760532 c.726T>C synonymous_variant 0.16 rifampicin Not assoc w R - Interim
rpoB 760533 p.Val243Thr missense_variant 0.15 rifampicin Uncertain significance
rpoB 760547 c.741G>T synonymous_variant 0.16 rifampicin Uncertain significance
rpoB 760563 p.Arg253Met missense_variant 0.19 rifampicin Uncertain significance
rpoB 760591 p.Val262Ala missense_variant 0.19 rifampicin Uncertain significance
rpoB 760611 c.805T>C synonymous_variant 0.2 rifampicin Not assoc w R - Interim
rpoB 760646 c.840C>G synonymous_variant 0.24 rifampicin Not assoc w R - Interim
rpoB 760655 c.849A>G synonymous_variant 0.22 rifampicin Not assoc w R - Interim
rpoB 760661 c.855A>C synonymous_variant 0.2 rifampicin Not assoc w R - Interim
rpoB 760670 c.864G>C synonymous_variant 0.18 rifampicin Uncertain significance
rpoB 760674 c.868T>C synonymous_variant 0.18 rifampicin Not assoc w R - Interim
rpoB 760679 c.873A>G synonymous_variant 0.18 rifampicin Not assoc w R - Interim
rpoB 760683 c.877T>C synonymous_variant 0.19 rifampicin Not assoc w R - Interim
rpoB 760724 c.918T>C synonymous_variant 0.19 rifampicin Not assoc w R - Interim
rpoB 760730 c.924T>C synonymous_variant 0.17 rifampicin Not assoc w R - Interim
rpoB 760751 c.945G>C synonymous_variant 0.17 rifampicin Uncertain significance
rpoB 760757 c.951T>C synonymous_variant 0.17 rifampicin Uncertain significance
rpoB 760759 p.Val318Ala missense_variant 0.17 rifampicin Uncertain significance
rpoB 760769 c.963C>G synonymous_variant 0.19 rifampicin Uncertain significance
rpoB 760784 c.978G>C synonymous_variant 0.2 rifampicin Uncertain significance
rpoB 760793 c.987A>G synonymous_variant 0.21 rifampicin Uncertain significance
rpoB 760805 c.999G>C synonymous_variant 0.23 rifampicin Uncertain significance
rpoB 760817 c.1011A>G synonymous_variant 0.21 rifampicin Uncertain significance
rpoB 760820 c.1014T>C synonymous_variant 0.21 rifampicin Uncertain significance
rpoB 760826 c.1020C>G synonymous_variant 0.22 rifampicin Not assoc w R - Interim
rpoB 760830 c.1024T>C synonymous_variant 0.23 rifampicin Not assoc w R - Interim
rpoB 760841 c.1035T>C synonymous_variant 0.24 rifampicin Not assoc w R - Interim
rpoB 760845 p.Thr347Ala missense_variant 0.24 rifampicin Uncertain significance
rpoB 760859 c.1053T>C synonymous_variant 0.24 rifampicin Uncertain significance
rpoB 760862 c.1056G>C synonymous_variant 0.23 rifampicin Not assoc w R - Interim
rpoB 760869 p.Val355Thr missense_variant 0.23 rifampicin Uncertain significance
rpoB 760886 c.1080A>G synonymous_variant 0.24 rifampicin Uncertain significance
rpoB 760919 c.1113C>G synonymous_variant 0.24 rifampicin Uncertain significance
rpoB 760925 c.1119T>C synonymous_variant 0.23 rifampicin Uncertain significance
rpoB 760928 c.1122G>C synonymous_variant 0.22 rifampicin Not assoc w R - Interim
rpoB 760931 c.1125C>G synonymous_variant 0.22 rifampicin Uncertain significance
rpoB 760946 c.1140A>G synonymous_variant 0.26 rifampicin Not assoc w R - Interim
rpoB 760973 c.1167G>C synonymous_variant 0.28 rifampicin Uncertain significance
rpoB 760982 c.1176G>C synonymous_variant 0.27 rifampicin Not assoc w R - Interim
rpoB 761006 c.1200C>G synonymous_variant 0.26 rifampicin Not assoc w R - Interim
rpoB 761015 c.1209G>C synonymous_variant 0.29 rifampicin Not assoc w R - Interim
rpoB 761021 c.1215G>C synonymous_variant 0.28 rifampicin Uncertain significance
rpoB 761027 c.1221A>G synonymous_variant 0.28 rifampicin Not assoc w R - Interim
rpoB 761036 c.1230G>C synonymous_variant 0.29 rifampicin Not assoc w R - Interim
rpoB 761037 c.1231T>C synonymous_variant 0.28 rifampicin Not assoc w R - Interim
rpoB 761057 c.1251G>C synonymous_variant 0.28 rifampicin Not assoc w R - Interim
rpoB 761097 c.1291_1293delAGCinsTCG synonymous_variant 0.27 rifampicin Uncertain significance
rpoB 761102 c.1296A>G synonymous_variant 0.28 rifampicin Uncertain significance
rpoB 761129 c.1323G>C synonymous_variant 0.32 rifampicin Not assoc w R - Interim
rpoB 761133 c.1327T>C synonymous_variant 0.32 rifampicin Not assoc w R - Interim
rpoB 761150 c.1344A>C synonymous_variant 0.32 rifampicin Not assoc w R - Interim
rpoB 761165 c.1359G>T synonymous_variant 0.33 rifampicin Not assoc w R - Interim
rpoB 761180 c.1374A>C synonymous_variant 0.32 rifampicin Not assoc w R - Interim
rpoB 761189 c.1383T>C synonymous_variant 0.31 rifampicin Not assoc w R - Interim
rpoB 761195 c.1389G>C synonymous_variant 0.29 rifampicin Not assoc w R - Interim
rpoB 761207 c.1401C>T synonymous_variant 0.28 rifampicin Uncertain significance
rpoB 761213 c.1407G>T synonymous_variant 0.27 rifampicin Uncertain significance
rpoB 761234 c.1428G>C synonymous_variant 0.26 rifampicin Not assoc w R - Interim
rpoB 761249 c.1443A>G synonymous_variant 0.24 rifampicin Not assoc w R - Interim
rpoB 761255 c.1449T>G synonymous_variant 0.24 rifampicin Not assoc w R - Interim
rpoB 761261 c.1455G>T synonymous_variant 0.21 rifampicin Not assoc w R - Interim
rpoB 761264 c.1458C>G synonymous_variant 0.21 rifampicin Not assoc w R - Interim
rpoB 761300 c.1494G>C synonymous_variant 0.2 rifampicin Not assoc w R - Interim
rpoB 761318 c.1512G>C synonymous_variant 0.17 rifampicin Not assoc w R - Interim
rpoB 761327 c.1521A>G synonymous_variant 0.18 rifampicin Not assoc w R - Interim
rpoB 761345 c.1539G>C synonymous_variant 0.17 rifampicin Uncertain significance
rpoB 761354 c.1548C>T synonymous_variant 0.15 rifampicin Uncertain significance
rpoB 761465 c.1659G>C synonymous_variant 0.15 rifampicin Uncertain significance
rpoB 761510 c.1704T>C synonymous_variant 0.18 rifampicin Uncertain significance
rpoB 761531 c.1725C>G synonymous_variant 0.16 rifampicin Uncertain significance
rpoB 761561 c.1755C>G synonymous_variant 0.16 rifampicin Uncertain significance
rpoB 761579 c.1773G>C synonymous_variant 0.16 rifampicin Not assoc w R - Interim
rpoB 761612 c.1806G>T synonymous_variant 0.15 rifampicin Not assoc w R - Interim
rpoB 761615 c.1809A>C synonymous_variant 0.15 rifampicin Not assoc w R - Interim
rpoB 761636 c.1830G>T synonymous_variant 0.16 rifampicin Not assoc w R - Interim
rpoB 761948 c.2142G>C synonymous_variant 0.16 rifampicin Not assoc w R - Interim
rpoB 761954 c.2148C>G synonymous_variant 0.16 rifampicin Not assoc w R - Interim
rpoB 761999 c.2193G>C synonymous_variant 0.21 rifampicin Uncertain significance
rpoB 762008 c.2202C>G synonymous_variant 0.2 rifampicin Uncertain significance
rpoB 762014 c.2208C>T synonymous_variant 0.22 rifampicin Uncertain significance
rpoB 762017 c.2211A>G synonymous_variant 0.23 rifampicin Not assoc w R - Interim
rpoB 762053 c.2247T>C synonymous_variant 0.23 rifampicin Not assoc w R - Interim
rpoB 762062 c.2256T>C synonymous_variant 0.24 rifampicin Not assoc w R - Interim
rpoB 762065 c.2259T>C synonymous_variant 0.24 rifampicin Not assoc w R - Interim
rpoB 762083 c.2277T>C synonymous_variant 0.23 rifampicin Not assoc w R - Interim
rpoB 762086 c.2280G>C synonymous_variant 0.23 rifampicin Not assoc w R - Interim
rpoB 762101 c.2295C>G synonymous_variant 0.24 rifampicin Not assoc w R - Interim
rpoB 762114 p.Ile770Val missense_variant 0.25 rifampicin Uncertain significance
rpoB 762131 c.2325C>G synonymous_variant 0.25 rifampicin Uncertain significance
rpoB 762143 c.2337T>C synonymous_variant 0.25 rifampicin Uncertain significance
rpoB 762149 c.2343G>C synonymous_variant 0.26 rifampicin Not assoc w R - Interim
rpoB 762185 c.2379G>C synonymous_variant 0.26 rifampicin Not assoc w R - Interim
rpoB 762233 c.2427G>C synonymous_variant 0.28 rifampicin Not assoc w R - Interim
rpoB 762254 c.2448T>C synonymous_variant 0.25 rifampicin Not assoc w R - Interim
rpoB 762257 c.2451C>G synonymous_variant 0.25 rifampicin Uncertain significance
rpoB 762266 c.2460T>C synonymous_variant 0.25 rifampicin Uncertain significance
rpoB 762284 c.2478G>C synonymous_variant 0.24 rifampicin Not assoc w R - Interim
rpoB 762293 c.2487T>C synonymous_variant 0.22 rifampicin Not assoc w R - Interim
rpoB 762296 c.2490G>C synonymous_variant 0.22 rifampicin Not assoc w R - Interim
rpoB 762317 c.2511A>G synonymous_variant 0.19 rifampicin Not assoc w R - Interim
rpoB 762329 c.2523G>C synonymous_variant 0.2 rifampicin Not assoc w R - Interim
rpoB 762338 c.2532T>C synonymous_variant 0.22 rifampicin Uncertain significance
rpoB 762347 c.2541T>C synonymous_variant 0.22 rifampicin Uncertain significance
rpoB 762362 p.Glu852Asp missense_variant 0.22 rifampicin Uncertain significance
rpoB 762369 c.2563T>C synonymous_variant 0.22 rifampicin Uncertain significance
rpoC 762398 c.-972T>C upstream_gene_variant 0.2 rifampicin Uncertain significance
rpoC 762410 c.-960T>C upstream_gene_variant 0.19 rifampicin Uncertain significance
rpoB 762416 c.2610A>G synonymous_variant 0.19 rifampicin Not assoc w R - Interim
rpoC 762434 c.-936T>C upstream_gene_variant 0.16 rifampicin Uncertain significance
rpoC 762443 c.-927G>C upstream_gene_variant 0.16 rifampicin Uncertain significance
rpoB 762449 c.2643C>A synonymous_variant 0.15 rifampicin Not assoc w R - Interim
rpoB 762827 c.3021G>C synonymous_variant 0.16 rifampicin Not assoc w R - Interim
rpoB 762836 c.3030C>T synonymous_variant 0.16 rifampicin Not assoc w R - Interim
rpoB 762857 c.3051C>G synonymous_variant 0.17 rifampicin Not assoc w R - Interim
rpoB 762860 c.3054G>C synonymous_variant 0.17 rifampicin Not assoc w R - Interim
rpoB 762863 c.3057T>C synonymous_variant 0.17 rifampicin Not assoc w R - Interim
rpoB 762920 c.3114C>T synonymous_variant 0.24 rifampicin Not assoc w R - Interim
rpoB 762929 c.3123G>T synonymous_variant 0.21 rifampicin Not assoc w R - Interim
rpoC 762947 c.-423C>G upstream_gene_variant 0.23 rifampicin Uncertain significance
rpoB 762962 c.3156C>T synonymous_variant 0.23 rifampicin Not assoc w R - Interim
rpoC 762989 c.-381G>C upstream_gene_variant 0.21 rifampicin Uncertain significance
rpoB 762995 c.3189G>T synonymous_variant 0.22 rifampicin Not assoc w R - Interim
rpoB 763028 c.3222T>C synonymous_variant 0.23 rifampicin Not assoc w R - Interim
rpoB 763031 c.3225T>G synonymous_variant 0.23 rifampicin Not assoc w R - Interim
rpoB 763034 c.3228C>G synonymous_variant 0.24 rifampicin Not assoc w R - Interim
rpoB 763040 c.3234C>G synonymous_variant 0.26 rifampicin Not assoc w R - Interim
rpoB 763070 c.3264T>C synonymous_variant 0.27 rifampicin Not assoc w R - Interim
rpoB 763085 c.3279C>G synonymous_variant 0.26 rifampicin Not assoc w R - Interim
rpoB 763115 c.3309T>C synonymous_variant 0.24 rifampicin Not assoc w R - Interim
rpoC 763139 c.-231C>T upstream_gene_variant 0.21 rifampicin Uncertain significance
rpoC 763148 c.-222G>C upstream_gene_variant 0.21 rifampicin Uncertain significance
rpoC 763158 c.-212C>T upstream_gene_variant 0.19 rifampicin Uncertain significance
rpoB 763166 c.3360A>G synonymous_variant 0.18 rifampicin Not assoc w R - Interim
rpoC 763441 c.72C>T synonymous_variant 0.15 rifampicin Uncertain significance
rpoC 763486 c.117T>G synonymous_variant 0.2 rifampicin Uncertain significance
rpoC 763528 c.159G>A synonymous_variant 0.25 rifampicin Not assoc w R - Interim
rpoC 763546 c.177A>G synonymous_variant 0.27 rifampicin Not assoc w R - Interim
rpoC 763570 c.201G>T synonymous_variant 0.3 rifampicin Uncertain significance
rpoC 763573 c.204G>C synonymous_variant 0.3 rifampicin Not assoc w R - Interim
rpoC 763576 c.207C>G synonymous_variant 0.29 rifampicin Uncertain significance
rpoC 763594 c.225C>T synonymous_variant 0.3 rifampicin Not assoc w R - Interim
rpoC 763603 c.234C>T synonymous_variant 0.3 rifampicin Not assoc w R - Interim
rpoC 763636 c.267T>C synonymous_variant 0.29 rifampicin Uncertain significance
rpoC 763660 c.291T>G synonymous_variant 0.31 rifampicin Not assoc w R - Interim
rpoC 763675 c.306C>G synonymous_variant 0.3 rifampicin Not assoc w R - Interim
rpoC 763702 c.333C>G synonymous_variant 0.27 rifampicin Not assoc w R - Interim
rpoC 763714 c.345G>C synonymous_variant 0.25 rifampicin Not assoc w R - Interim
rpoC 763717 c.348T>C synonymous_variant 0.26 rifampicin Not assoc w R - Interim
rpoC 763723 c.354G>C synonymous_variant 0.25 rifampicin Uncertain significance
rpoC 763732 c.363C>G synonymous_variant 0.25 rifampicin Uncertain significance
rpoC 763741 c.372C>T synonymous_variant 0.25 rifampicin Uncertain significance
rpoC 763744 c.375G>C synonymous_variant 0.25 rifampicin Uncertain significance
rpoC 763765 c.396T>C synonymous_variant 0.22 rifampicin Uncertain significance
rpoC 763774 c.405G>C synonymous_variant 0.21 rifampicin Uncertain significance
rpoC 763792 p.Glu141Asp missense_variant 0.2 rifampicin Uncertain significance
rpoC 763801 c.432C>T synonymous_variant 0.21 rifampicin Uncertain significance
rpoC 763807 c.438T>C synonymous_variant 0.21 rifampicin Not assoc w R - Interim
rpoC 763816 c.447C>G synonymous_variant 0.2 rifampicin Uncertain significance
rpoC 763835 p.Ala156Met missense_variant 0.19 rifampicin Uncertain significance
rpoC 763853 p.Val162Ile missense_variant 0.19 rifampicin Uncertain significance
rpoC 763858 c.489A>G synonymous_variant 0.19 rifampicin Uncertain significance
rpoC 763872 p.Gly168Ala missense_variant 0.19 rifampicin Uncertain significance
rpoC 763876 p.Glu169Asp missense_variant 0.19 rifampicin Uncertain significance
rpoC 763879 c.510A>G synonymous_variant 0.18 rifampicin Uncertain significance
rpoC 763888 c.519G>C synonymous_variant 0.18 rifampicin Uncertain significance
rpoC 763891 c.522G>C synonymous_variant 0.17 rifampicin Uncertain significance
rpoC 763894 c.525A>G synonymous_variant 0.17 rifampicin Uncertain significance
rpoC 763900 c.531G>C synonymous_variant 0.18 rifampicin Not assoc w R - Interim
rpoC 763933 c.564C>T synonymous_variant 0.2 rifampicin Not assoc w R - Interim
rpoC 763945 c.576T>C synonymous_variant 0.2 rifampicin Uncertain significance
rpoC 763951 c.582G>C synonymous_variant 0.21 rifampicin Not assoc w R - Interim
rpoC 763960 c.591T>C synonymous_variant 0.21 rifampicin Not assoc w R - Interim
rpoC 763969 c.600C>T synonymous_variant 0.2 rifampicin Not assoc w R - Interim
rpoC 763972 c.603C>T synonymous_variant 0.2 rifampicin Uncertain significance
rpoC 763987 c.618C>T synonymous_variant 0.16 rifampicin Uncertain significance
rpoC 763996 c.627T>C synonymous_variant 0.16 rifampicin Uncertain significance
rpoC 764002 c.633C>G synonymous_variant 0.18 rifampicin Uncertain significance
rpoC 764005 c.636G>C synonymous_variant 0.18 rifampicin Not assoc w R - Interim
rpoC 764011 c.642T>C synonymous_variant 0.18 rifampicin Uncertain significance
rpoC 764024 c.655_657delTTGinsCTC synonymous_variant 0.18 rifampicin Uncertain significance
rpoC 764059 c.690G>C synonymous_variant 0.16 rifampicin Uncertain significance
rpoC 764083 c.714A>G synonymous_variant 0.16 rifampicin Uncertain significance
rpoC 764112 p.Tyr248Phe missense_variant 0.15 rifampicin Uncertain significance
rpoC 764116 c.747C>T synonymous_variant 0.15 rifampicin Not assoc w R - Interim
rpoC 764131 c.762T>C synonymous_variant 0.17 rifampicin Uncertain significance
rpoC 764140 c.771C>T synonymous_variant 0.16 rifampicin Not assoc w R - Interim
rpoC 764188 c.819A>G synonymous_variant 0.19 rifampicin Not assoc w R - Interim
rpoC 764203 c.834G>T synonymous_variant 0.15 rifampicin Uncertain significance
rpoC 764213 p.Arg282Lys missense_variant 0.15 rifampicin Uncertain significance
rpoC 764254 c.885G>C synonymous_variant 0.17 rifampicin Uncertain significance
rpoC 764263 c.894G>C synonymous_variant 0.18 rifampicin Uncertain significance
rpoC 764266 c.897T>C synonymous_variant 0.18 rifampicin Uncertain significance
rpoC 764269 c.900G>C synonymous_variant 0.18 rifampicin Uncertain significance
rpoC 764278 c.909A>G synonymous_variant 0.18 rifampicin Not assoc w R - Interim
rpoC 764287 c.918C>T synonymous_variant 0.19 rifampicin Uncertain significance
rpoC 764293 c.924G>C synonymous_variant 0.2 rifampicin Not assoc w R - Interim
rpoC 764317 c.948C>G synonymous_variant 0.17 rifampicin Uncertain significance
rpoC 764320 c.951C>G synonymous_variant 0.17 rifampicin Uncertain significance
rpoC 764338 c.969G>A synonymous_variant 0.2 rifampicin Not assoc w R - Interim
rpoC 764365 c.996C>T synonymous_variant 0.21 rifampicin Not assoc w R - Interim
rpoC 764380 c.1011G>A synonymous_variant 0.21 rifampicin Uncertain significance
rpoC 764387 c.1018T>C synonymous_variant 0.22 rifampicin Not assoc w R - Interim
rpoC 764405 c.1036_1038delAGGinsCGC synonymous_variant 0.2 rifampicin Not assoc w R - Interim
rpoC 764419 c.1050C>G synonymous_variant 0.2 rifampicin Uncertain significance
rpoC 764428 c.1059G>C synonymous_variant 0.18 rifampicin Not assoc w R - Interim
rpoC 764431 c.1062G>C synonymous_variant 0.17 rifampicin Not assoc w R - Interim
rpoC 764434 c.1065A>G synonymous_variant 0.17 rifampicin Not assoc w R - Interim
rpoC 764446 c.1077T>C synonymous_variant 0.17 rifampicin Uncertain significance
rpoC 764449 c.1080G>C synonymous_variant 0.17 rifampicin Uncertain significance
rpoC 764452 c.1083T>C synonymous_variant 0.17 rifampicin Uncertain significance
rpoC 764458 c.1089G>C synonymous_variant 0.18 rifampicin Not assoc w R - Interim
rpoC 764461 c.1092A>G synonymous_variant 0.19 rifampicin Not assoc w R - Interim
rpoC 764497 c.1128A>G synonymous_variant 0.21 rifampicin Not assoc w R - Interim
rpoC 764521 c.1152T>C synonymous_variant 0.2 rifampicin Not assoc w R - Interim
rpoC 764536 c.1167G>C synonymous_variant 0.2 rifampicin Uncertain significance
rpoC 764539 c.1170C>G synonymous_variant 0.2 rifampicin Not assoc w R - Interim
rpoC 764554 c.1185C>T synonymous_variant 0.19 rifampicin Uncertain significance
rpoC 764560 c.1191T>C synonymous_variant 0.18 rifampicin Not assoc w R - Interim
rpoC 764566 c.1197C>G synonymous_variant 0.18 rifampicin Not assoc w R - Interim
rpoC 764576 c.1207_1208delTCinsAG synonymous_variant 0.18 rifampicin Uncertain significance
rpoC 764593 c.1224C>T synonymous_variant 0.18 rifampicin Uncertain significance
rpoC 764611 c.1242G>C synonymous_variant 0.19 rifampicin Uncertain significance
rpoC 764626 c.1257C>T synonymous_variant 0.2 rifampicin Not assoc w R - Interim
rpoC 764632 c.1263T>C synonymous_variant 0.21 rifampicin Not assoc w R - Interim
rpoC 764650 c.1281G>T synonymous_variant 0.21 rifampicin Not assoc w R - Interim
rpoC 764668 c.1299C>T synonymous_variant 0.2 rifampicin Not assoc w R - Interim
rpoC 764752 c.1383G>C synonymous_variant 0.22 rifampicin Not assoc w R - Interim
rpoC 764764 c.1395T>C synonymous_variant 0.22 rifampicin Not assoc w R - Interim
rpoC 764791 c.1422C>G synonymous_variant 0.22 rifampicin Not assoc w R - Interim
rpoC 764803 c.1434C>T synonymous_variant 0.22 rifampicin Not assoc w R - Interim
rpoC 764809 c.1440C>T synonymous_variant 0.22 rifampicin Not assoc w R
rpoC 764815 c.1446A>G synonymous_variant 0.22 rifampicin Not assoc w R - Interim
rpoC 764827 c.1458G>C synonymous_variant 0.22 rifampicin Not assoc w R - Interim
rpoC 764888 c.1519T>C synonymous_variant 0.19 rifampicin Not assoc w R - Interim
rpoC 764902 c.1533C>T synonymous_variant 0.16 rifampicin Uncertain significance
rpoC 764915 c.1546C>T synonymous_variant 0.17 rifampicin Uncertain significance
rpoC 764932 c.1563C>G synonymous_variant 0.16 rifampicin Uncertain significance
rpoC 764935 c.1566T>C synonymous_variant 0.17 rifampicin Uncertain significance
rpoC 765150 p.Gly594Glu missense_variant 1.0 rifampicin Not assoc w R
rpoC 765499 c.2130C>G synonymous_variant 0.19 rifampicin Not assoc w R - Interim
rpoC 765508 c.2139C>G synonymous_variant 0.18 rifampicin Not assoc w R - Interim
rpoC 765529 c.2160C>T synonymous_variant 0.18 rifampicin Uncertain significance
rpoC 765541 c.2172C>G synonymous_variant 0.19 rifampicin Uncertain significance
rpoC 765550 c.2181C>T synonymous_variant 0.18 rifampicin Uncertain significance
rpoC 765553 c.2184C>T synonymous_variant 0.18 rifampicin Not assoc w R - Interim
rpoC 765556 c.2187G>C synonymous_variant 0.18 rifampicin Uncertain significance
rpoC 765562 c.2193G>C synonymous_variant 0.18 rifampicin Uncertain significance
rpoC 765580 c.2211G>C synonymous_variant 0.18 rifampicin Uncertain significance
rpoC 765583 c.2214G>C synonymous_variant 0.18 rifampicin Uncertain significance
rpoC 765613 p.His748Gln missense_variant 0.16 rifampicin Uncertain significance
rpoC 765928 c.2559C>G synonymous_variant 0.19 rifampicin Not assoc w R - Interim
rpoC 765967 c.2598C>T synonymous_variant 0.18 rifampicin Not assoc w R - Interim
rpoC 765979 c.2610C>G synonymous_variant 0.18 rifampicin Not assoc w R - Interim
rpoC 765982 c.2613C>T synonymous_variant 0.17 rifampicin Not assoc w R - Interim
rpoC 765994 c.2625A>T synonymous_variant 0.16 rifampicin Not assoc w R - Interim
rpoC 766010 p.Ser881Thr missense_variant 0.14 rifampicin Uncertain significance
rpoC 766054 c.2685C>G synonymous_variant 0.16 rifampicin Uncertain significance
rpoC 766061 p.Val898Ile missense_variant 0.17 rifampicin Uncertain significance
rpoC 766129 c.2760C>G synonymous_variant 0.16 rifampicin Uncertain significance
rpoC 766135 c.2766G>A synonymous_variant 0.15 rifampicin Not assoc w R - Interim
rpoC 766321 c.2952C>G synonymous_variant 0.15 rifampicin Uncertain significance
rpoC 766345 c.2976T>C synonymous_variant 0.19 rifampicin Uncertain significance
rpoC 766348 c.2979A>G synonymous_variant 0.18 rifampicin Not assoc w R - Interim
rpoC 766357 c.2988C>T synonymous_variant 0.16 rifampicin Uncertain significance
rpoC 766363 c.2994G>C synonymous_variant 0.16 rifampicin Uncertain significance
rpoC 766369 c.3000C>G synonymous_variant 0.16 rifampicin Uncertain significance
rpoC 766381 c.3012C>T synonymous_variant 0.18 rifampicin Uncertain significance
rpoC 766384 c.3015A>G synonymous_variant 0.17 rifampicin Uncertain significance
rpoC 766390 c.3021C>T synonymous_variant 0.17 rifampicin Uncertain significance
rpoC 766408 c.3039C>T synonymous_variant 0.17 rifampicin Not assoc w R - Interim
rpoC 766426 c.3057C>T synonymous_variant 0.18 rifampicin Uncertain significance
rpoC 766447 c.3078T>C synonymous_variant 0.16 rifampicin Uncertain significance
rpoC 766462 c.3093G>T synonymous_variant 0.17 rifampicin Uncertain significance
rpoC 766483 c.3114G>C synonymous_variant 0.16 rifampicin Uncertain significance
rpoC 766484 p.Val1039Ile missense_variant 0.16 rifampicin Uncertain significance
rpoC 766492 c.3123T>C synonymous_variant 0.17 rifampicin Uncertain significance
rpoC 766495 c.3126C>T synonymous_variant 0.18 rifampicin Not assoc w R - Interim
rpoC 766522 c.3153C>G synonymous_variant 0.17 rifampicin Uncertain significance
rpoC 766530 p.Arg1054Gln missense_variant 0.18 rifampicin Uncertain significance
rpoC 766540 c.3171C>T synonymous_variant 0.17 rifampicin Uncertain significance
rpoC 766543 c.3174C>T synonymous_variant 0.16 rifampicin Uncertain significance
rpoC 766549 c.3180G>C synonymous_variant 0.17 rifampicin Uncertain significance
rpoC 766573 c.3204T>C synonymous_variant 0.16 rifampicin Uncertain significance
rpoC 766583 p.Gly1072Ser missense_variant 0.15 rifampicin Uncertain significance
rpoC 766597 c.3228C>G synonymous_variant 0.16 rifampicin Not assoc w R - Interim
rpoC 766607 p.Ile1080Leu missense_variant 0.18 rifampicin Uncertain significance
rpoC 766630 c.3261G>T synonymous_variant 0.2 rifampicin Uncertain significance
rpoC 766657 c.3288A>G synonymous_variant 0.22 rifampicin Uncertain significance
rpoC 766666 c.3297C>G synonymous_variant 0.22 rifampicin Uncertain significance
rpoC 766672 c.3303T>C synonymous_variant 0.23 rifampicin Uncertain significance
rpoC 766693 c.3324C>T synonymous_variant 0.21 rifampicin Uncertain significance
rpoC 766726 c.3357T>C synonymous_variant 0.24 rifampicin Uncertain significance
rpoC 766738 c.3369G>C synonymous_variant 0.23 rifampicin Uncertain significance
rpoC 766765 c.3396A>C synonymous_variant 0.21 rifampicin Not assoc w R - Interim
rpoC 766774 c.3405T>C synonymous_variant 0.21 rifampicin Uncertain significance
rpoC 766801 c.3432C>A synonymous_variant 0.16 rifampicin Uncertain significance
rpoC 766804 c.3435A>G synonymous_variant 0.17 rifampicin Not assoc w R - Interim
rpoC 766837 c.3468G>C synonymous_variant 0.23 rifampicin Not assoc w R - Interim
rpoC 766843 c.3474T>C synonymous_variant 0.22 rifampicin Not assoc w R - Interim
rpoC 766861 c.3492G>C synonymous_variant 0.22 rifampicin Not assoc w R - Interim
rpoC 766864 c.3495G>C synonymous_variant 0.22 rifampicin Uncertain significance
rpoC 766894 c.3525T>C synonymous_variant 0.23 rifampicin Uncertain significance
rpoC 766895 c.3526T>C synonymous_variant 0.23 rifampicin Uncertain significance
rpoC 766900 c.3531T>C synonymous_variant 0.24 rifampicin Uncertain significance
rpoC 766918 c.3549C>T synonymous_variant 0.21 rifampicin Not assoc w R - Interim
rpoC 766933 c.3564A>G synonymous_variant 0.21 rifampicin Uncertain significance
rpoC 766945 c.3576A>G synonymous_variant 0.22 rifampicin Not assoc w R - Interim
rpoC 766963 c.3594T>C synonymous_variant 0.22 rifampicin Not assoc w R - Interim
rpoC 766972 c.3603G>C synonymous_variant 0.23 rifampicin Uncertain significance
rpoC 766978 c.3609C>A synonymous_variant 0.24 rifampicin Uncertain significance
rpoC 766996 c.3627C>T synonymous_variant 0.24 rifampicin Not assoc w R - Interim
rpoC 767033 c.3664_3666delTCGinsAGT synonymous_variant 0.26 rifampicin Uncertain significance
rpoC 767059 c.3690T>G synonymous_variant 0.25 rifampicin Not assoc w R - Interim
rpoC 767062 c.3693C>A synonymous_variant 0.25 rifampicin Uncertain significance
rpoC 767098 c.3729T>C synonymous_variant 0.22 rifampicin Not assoc w R - Interim
rpoC 767119 c.3750A>G synonymous_variant 0.22 rifampicin Not assoc w R - Interim
rpoC 767134 c.3765C>A synonymous_variant 0.22 rifampicin Uncertain significance
rpoC 767149 c.3780C>A synonymous_variant 0.21 rifampicin Uncertain significance
rpoC 767164 c.3795C>T synonymous_variant 0.21 rifampicin Uncertain significance
rpoC 767167 c.3798C>G synonymous_variant 0.21 rifampicin Not assoc w R - Interim
rpoC 767180 p.Ala1271Gln missense_variant 0.19 rifampicin Uncertain significance
rpoC 767191 c.3822C>G synonymous_variant 0.17 rifampicin Not assoc w R - Interim
rpoC 767206 c.3837C>G synonymous_variant 0.17 rifampicin Not assoc w R - Interim
mmpL5 775639 p.Ile948Val missense_variant 1.0 bedaquiline Not assoc w R - Interim
clofazimine Not assoc w R
rpsL 781395 c.-165T>C upstream_gene_variant 1.0 streptomycin Not assoc w R
rpsL 781736 c.177T>C synonymous_variant 0.16 streptomycin Uncertain significance
rpsL 781742 c.183C>T synonymous_variant 0.18 streptomycin Uncertain significance
rpsL 781751 c.192G>C synonymous_variant 0.17 streptomycin Uncertain significance
rpsL 781754 c.195G>C synonymous_variant 0.18 streptomycin Uncertain significance
rpsL 781760 c.201T>C synonymous_variant 0.19 streptomycin Uncertain significance
rpsL 781811 c.252C>T synonymous_variant 0.19 streptomycin Uncertain significance
rpsL 781814 c.255C>T synonymous_variant 0.2 streptomycin Uncertain significance
rpsL 781817 c.258G>T synonymous_variant 0.19 streptomycin Uncertain significance
rpsL 781832 c.273T>C synonymous_variant 0.19 streptomycin Uncertain significance
rpsL 781838 c.279G>C synonymous_variant 0.18 streptomycin Uncertain significance
rpsL 781841 c.282C>G synonymous_variant 0.17 streptomycin Uncertain significance
rpsL 781865 c.306G>C synonymous_variant 0.17 streptomycin Uncertain significance
rpsL 781868 c.309T>C synonymous_variant 0.17 streptomycin Uncertain significance
rpsL 781871 c.312G>C synonymous_variant 0.17 streptomycin Uncertain significance
rpsL 781898 c.339A>T synonymous_variant 0.15 streptomycin Uncertain significance
fbiC 1304853 c.1923C>T synonymous_variant 0.16 clofazimine Uncertain significance
delamanid Uncertain significance
pretomanid Uncertain significance
fbiC 1304856 c.1926C>G synonymous_variant 0.16 clofazimine Uncertain significance
delamanid Uncertain significance
pretomanid Uncertain significance
fbiC 1304869 c.1939C>T synonymous_variant 0.16 clofazimine Uncertain significance
delamanid Uncertain significance
pretomanid Uncertain significance
fbiC 1304880 c.1950C>T synonymous_variant 0.16 clofazimine Uncertain significance
delamanid Uncertain significance
pretomanid Uncertain significance
fbiC 1304893 p.Gly655Ser missense_variant 0.19 clofazimine Uncertain significance
delamanid Uncertain significance
pretomanid Uncertain significance
fbiC 1304907 c.1977C>G synonymous_variant 0.2 clofazimine Uncertain significance
delamanid Uncertain significance
pretomanid Uncertain significance
fbiC 1304910 c.1980G>C synonymous_variant 0.2 clofazimine Uncertain significance
delamanid Uncertain significance
pretomanid Uncertain significance
fbiC 1304916 c.1986T>C synonymous_variant 0.2 clofazimine Uncertain significance
delamanid Uncertain significance
pretomanid Uncertain significance
fbiC 1304928 c.1998T>C synonymous_variant 0.23 clofazimine Uncertain significance
delamanid Uncertain significance
pretomanid Uncertain significance
fbiC 1304937 c.2007G>C synonymous_variant 0.23 clofazimine Uncertain significance
delamanid Uncertain significance
pretomanid Uncertain significance
fbiC 1304940 c.2010A>G synonymous_variant 0.23 clofazimine Uncertain significance
delamanid Uncertain significance
pretomanid Uncertain significance
fbiC 1304944 c.2014C>T synonymous_variant 0.24 clofazimine Uncertain significance
delamanid Uncertain significance
pretomanid Uncertain significance
fbiC 1304955 c.2025G>A synonymous_variant 0.22 clofazimine Uncertain significance
delamanid Uncertain significance
pretomanid Uncertain significance
fbiC 1304958 c.2028T>G synonymous_variant 0.22 clofazimine Uncertain significance
delamanid Uncertain significance
pretomanid Uncertain significance
fbiC 1304961 c.2031C>T synonymous_variant 0.22 clofazimine Uncertain significance
delamanid Uncertain significance
pretomanid Uncertain significance
fbiC 1304983 c.2053C>T synonymous_variant 0.24 clofazimine Uncertain significance
delamanid Uncertain significance
pretomanid Uncertain significance
fbiC 1304994 c.2064A>G synonymous_variant 0.21 clofazimine Uncertain significance
delamanid Uncertain significance
pretomanid Uncertain significance
fbiC 1304995 c.2065T>C synonymous_variant 0.2 clofazimine Uncertain significance
delamanid Uncertain significance
pretomanid Uncertain significance
fbiC 1305012 c.2082G>C synonymous_variant 0.2 clofazimine Uncertain significance
delamanid Uncertain significance
pretomanid Uncertain significance
fbiC 1305014 p.Thr695Ser missense_variant 0.21 clofazimine Uncertain significance
delamanid Uncertain significance
pretomanid Uncertain significance
fbiC 1305021 c.2091C>A synonymous_variant 0.22 clofazimine Uncertain significance
delamanid Uncertain significance
pretomanid Uncertain significance
fbiC 1305033 c.2103T>G synonymous_variant 0.21 clofazimine Uncertain significance
delamanid Uncertain significance
pretomanid Uncertain significance
fbiC 1305042 c.2112A>G synonymous_variant 0.22 clofazimine Uncertain significance
delamanid Uncertain significance
pretomanid Uncertain significance
fbiC 1305045 c.2115A>G synonymous_variant 0.22 clofazimine Uncertain significance
delamanid Uncertain significance
pretomanid Uncertain significance
fbiC 1305051 c.2121G>C synonymous_variant 0.21 clofazimine Uncertain significance
delamanid Uncertain significance
pretomanid Uncertain significance
fbiC 1305063 c.2133G>C synonymous_variant 0.18 clofazimine Uncertain significance
delamanid Uncertain significance
pretomanid Uncertain significance
fbiC 1305069 c.2139G>C synonymous_variant 0.16 clofazimine Uncertain significance
delamanid Uncertain significance
pretomanid Uncertain significance
fbiC 1305075 c.2145T>C synonymous_variant 0.15 clofazimine Uncertain significance
delamanid Uncertain significance
pretomanid Uncertain significance
rrs 1471659 n.-187C>T upstream_gene_variant 1.0 amikacin Uncertain significance
capreomycin Uncertain significance
kanamycin Uncertain significance
streptomycin Uncertain significance
rrs 1472300 n.455C>T non_coding_transcript_exon_variant 0.14 amikacin Uncertain significance
capreomycin Uncertain significance
kanamycin Uncertain significance
streptomycin Uncertain significance
rrl 1473806 n.149C>T non_coding_transcript_exon_variant 0.23 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1473813 n.156C>T non_coding_transcript_exon_variant 0.22 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1473839 n.182G>T non_coding_transcript_exon_variant 0.3 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1473877 n.220G>A non_coding_transcript_exon_variant 0.32 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1473898 n.241C>T non_coding_transcript_exon_variant 0.3 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1473899 n.242A>C non_coding_transcript_exon_variant 0.3 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1473943 n.286G>T non_coding_transcript_exon_variant 0.29 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1473944 n.287G>A non_coding_transcript_exon_variant 0.29 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1473966 n.309T>C non_coding_transcript_exon_variant 0.33 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1473971 n.314G>T non_coding_transcript_exon_variant 0.31 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1473981 n.324delGinsTT non_coding_transcript_exon_variant 0.28 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1473995 n.338G>T non_coding_transcript_exon_variant 0.29 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474001 n.344C>T non_coding_transcript_exon_variant 0.28 capreomycin Not assoc w R
linezolid Not assoc w R
rrl 1474009 n.352A>G non_coding_transcript_exon_variant 0.25 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474012 n.355C>T non_coding_transcript_exon_variant 0.25 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474036 n.379G>A non_coding_transcript_exon_variant 0.24 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474040 n.383G>A non_coding_transcript_exon_variant 0.23 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474054 n.397T>C non_coding_transcript_exon_variant 0.23 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474093 n.436G>T non_coding_transcript_exon_variant 0.21 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474099 n.442G>A non_coding_transcript_exon_variant 0.21 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474103 n.446A>T non_coding_transcript_exon_variant 0.21 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474111 n.454T>C non_coding_transcript_exon_variant 0.22 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474140 n.483C>T non_coding_transcript_exon_variant 0.23 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474151 n.494C>T non_coding_transcript_exon_variant 0.21 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474181 n.524C>T non_coding_transcript_exon_variant 0.22 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474639 n.982G>A non_coding_transcript_exon_variant 0.17 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474794 n.1137C>T non_coding_transcript_exon_variant 0.18 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474812 n.1155G>A non_coding_transcript_exon_variant 0.16 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474823 n.1166C>T non_coding_transcript_exon_variant 0.17 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474831 n.1174A>G non_coding_transcript_exon_variant 0.17 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474904 n.1247G>A non_coding_transcript_exon_variant 0.2 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474956 n.1299C>T non_coding_transcript_exon_variant 0.19 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474961 n.1304T>G non_coding_transcript_exon_variant 0.18 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474963 n.1306G>A non_coding_transcript_exon_variant 0.19 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474964 n.1307T>C non_coding_transcript_exon_variant 0.19 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474970 n.1313G>A non_coding_transcript_exon_variant 0.2 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475006 n.1349A>T non_coding_transcript_exon_variant 0.28 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475013 n.1356G>A non_coding_transcript_exon_variant 0.29 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475028 n.1371G>A non_coding_transcript_exon_variant 0.32 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475061 n.1404C>T non_coding_transcript_exon_variant 0.31 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475088 n.1431A>T non_coding_transcript_exon_variant 0.3 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475199 n.1542G>A non_coding_transcript_exon_variant 0.15 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475201 n.1544G>A non_coding_transcript_exon_variant 0.15 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475206 n.1549C>T non_coding_transcript_exon_variant 0.15 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475213 n.1556C>T non_coding_transcript_exon_variant 0.15 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475355 n.1698C>T non_coding_transcript_exon_variant 0.16 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475369 n.1712G>T non_coding_transcript_exon_variant 0.17 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475402 n.1745C>T non_coding_transcript_exon_variant 0.17 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475409 n.1752T>C non_coding_transcript_exon_variant 0.19 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475419 n.1762C>T non_coding_transcript_exon_variant 0.18 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475429 n.1772G>A non_coding_transcript_exon_variant 0.2 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475483 n.1826C>T non_coding_transcript_exon_variant 0.17 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475505 n.1848G>A non_coding_transcript_exon_variant 0.17 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475526 n.1869C>A non_coding_transcript_exon_variant 0.16 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475638 n.1981C>T non_coding_transcript_exon_variant 0.15 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475881 n.2224T>C non_coding_transcript_exon_variant 0.16 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475988 n.2331A>G non_coding_transcript_exon_variant 0.16 capreomycin Not assoc w R
linezolid Uncertain significance
rrl 1476214 n.2557G>T non_coding_transcript_exon_variant 0.19 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476215 n.2558C>T non_coding_transcript_exon_variant 0.19 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476224 n.2567A>G non_coding_transcript_exon_variant 0.18 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476281 n.2624T>C non_coding_transcript_exon_variant 0.19 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476297 n.2640C>T non_coding_transcript_exon_variant 0.2 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476299 n.2642C>T non_coding_transcript_exon_variant 0.2 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476583 n.2926G>A non_coding_transcript_exon_variant 0.15 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476584 n.2927C>T non_coding_transcript_exon_variant 0.15 capreomycin Not assoc w R
linezolid Uncertain significance
rrl 1476597 n.2940G>A non_coding_transcript_exon_variant 0.16 capreomycin Uncertain significance
linezolid Uncertain significance
inhA 1674601 p.Leu134Thr missense_variant 0.16 ethionamide Uncertain significance
isoniazid Uncertain significance
inhA 1674636 c.435C>G synonymous_variant 0.18 ethionamide Uncertain significance
isoniazid Uncertain significance
inhA 1674654 c.453G>C synonymous_variant 0.17 ethionamide Uncertain significance
isoniazid Uncertain significance
inhA 1674690 c.489C>G synonymous_variant 0.17 ethionamide Uncertain significance
isoniazid Uncertain significance
rpsA 1833667 c.126C>G synonymous_variant 0.17 pyrazinamide Uncertain significance
rpsA 1833703 c.162C>T synonymous_variant 0.17 pyrazinamide Not assoc w R - Interim
rpsA 1833724 c.183C>G synonymous_variant 0.17 pyrazinamide Uncertain significance
rpsA 1833727 c.186G>C synonymous_variant 0.16 pyrazinamide Uncertain significance
rpsA 1833745 c.204G>C synonymous_variant 0.19 pyrazinamide Uncertain significance
rpsA 1833760 c.219C>T synonymous_variant 0.19 pyrazinamide Not assoc w R - Interim
rpsA 1833793 c.252C>T synonymous_variant 0.2 pyrazinamide Uncertain significance
rpsA 1833811 c.270G>C synonymous_variant 0.19 pyrazinamide Uncertain significance
rpsA 1833835 c.294C>T synonymous_variant 0.19 pyrazinamide Uncertain significance
rpsA 1833838 c.297G>C synonymous_variant 0.18 pyrazinamide Uncertain significance
rpsA 1833841 c.300C>G synonymous_variant 0.19 pyrazinamide Uncertain significance
rpsA 1833844 c.303C>T synonymous_variant 0.19 pyrazinamide Uncertain significance
rpsA 1833856 c.315A>G synonymous_variant 0.2 pyrazinamide Uncertain significance
rpsA 1833874 c.333T>C synonymous_variant 0.19 pyrazinamide Uncertain significance
rpsA 1833928 c.387G>C synonymous_variant 0.21 pyrazinamide Uncertain significance
rpsA 1833940 c.399C>G synonymous_variant 0.2 pyrazinamide Uncertain significance
rpsA 1833971 c.430C>T synonymous_variant 0.2 pyrazinamide Uncertain significance
rpsA 1833979 c.438T>C synonymous_variant 0.2 pyrazinamide Uncertain significance
rpsA 1834000 c.459G>C synonymous_variant 0.2 pyrazinamide Uncertain significance
rpsA 1834021 c.480C>T synonymous_variant 0.23 pyrazinamide Uncertain significance
rpsA 1834030 c.489C>G synonymous_variant 0.22 pyrazinamide Uncertain significance
rpsA 1834097 c.556_557delTCinsAG synonymous_variant 0.17 pyrazinamide Uncertain significance
rpsA 1834102 c.561T>C synonymous_variant 0.17 pyrazinamide Uncertain significance
rpsA 1834195 c.654G>C synonymous_variant 0.16 pyrazinamide Uncertain significance
rpsA 1834210 c.669C>T synonymous_variant 0.17 pyrazinamide Uncertain significance
rpsA 1834222 c.681T>C synonymous_variant 0.17 pyrazinamide Uncertain significance
rpsA 1834249 c.708T>C synonymous_variant 0.17 pyrazinamide Uncertain significance
rpsA 1834261 c.720A>G synonymous_variant 0.16 pyrazinamide Not assoc w R - Interim
rpsA 1834264 c.723G>C synonymous_variant 0.17 pyrazinamide Uncertain significance
rpsA 1834396 c.855G>C synonymous_variant 0.15 pyrazinamide Uncertain significance
rpsA 1834451 c.910T>C synonymous_variant 0.17 pyrazinamide Uncertain significance
rpsA 1834468 c.927A>G synonymous_variant 0.17 pyrazinamide Uncertain significance
rpsA 1834474 c.933C>G synonymous_variant 0.16 pyrazinamide Uncertain significance
rpsA 1834477 c.936C>T synonymous_variant 0.17 pyrazinamide Not assoc w R - Interim
rpsA 1834489 c.948T>C synonymous_variant 0.16 pyrazinamide Uncertain significance
rpsA 1834495 c.954G>A synonymous_variant 0.17 pyrazinamide Uncertain significance
rpsA 1834498 c.957C>T synonymous_variant 0.17 pyrazinamide Uncertain significance
rpsA 1834528 c.987T>C synonymous_variant 0.18 pyrazinamide Uncertain significance
rpsA 1834540 c.999G>C synonymous_variant 0.19 pyrazinamide Uncertain significance
rpsA 1834546 c.1005T>C synonymous_variant 0.2 pyrazinamide Uncertain significance
rpsA 1834555 c.1014T>C synonymous_variant 0.19 pyrazinamide Uncertain significance
rpsA 1834609 c.1068T>C synonymous_variant 0.19 pyrazinamide Uncertain significance
rpsA 1834633 c.1092A>G synonymous_variant 0.17 pyrazinamide Uncertain significance
rpsA 1834639 c.1098T>C synonymous_variant 0.17 pyrazinamide Uncertain significance
rpsA 1834654 p.Glu371Asp missense_variant 0.16 pyrazinamide Uncertain significance
rpsA 1834690 c.1149T>C synonymous_variant 0.17 pyrazinamide Uncertain significance
tsnR 1854300 p.Leu232Pro missense_variant 1.0 linezolid Not assoc w R
tlyA 1917972 c.33A>G synonymous_variant 1.0 capreomycin Not assoc w R
katG 2156607 c.-497delA upstream_gene_variant 1.0 isoniazid Uncertain significance
Rv1979c 2223293 c.-129A>G upstream_gene_variant 1.0 bedaquiline Not assoc w R - Interim
clofazimine Not assoc w R
kasA 2518076 c.-39C>T upstream_gene_variant 0.9 isoniazid Uncertain significance
kasA 2518561 c.447T>C synonymous_variant 0.19 isoniazid Uncertain significance
kasA 2518574 p.Ile154Val missense_variant 0.17 isoniazid Uncertain significance
kasA 2518579 c.465T>C synonymous_variant 0.16 isoniazid Uncertain significance
kasA 2518585 c.471G>A synonymous_variant 0.16 isoniazid Uncertain significance
kasA 2518588 c.474T>C synonymous_variant 0.17 isoniazid Uncertain significance
kasA 2518591 c.477G>T synonymous_variant 0.18 isoniazid Uncertain significance
kasA 2518606 c.492G>C synonymous_variant 0.19 isoniazid Uncertain significance
kasA 2518609 p.Met165Ile missense_variant 0.18 isoniazid Uncertain significance
kasA 2518618 c.504G>C synonymous_variant 0.2 isoniazid Uncertain significance
kasA 2518627 c.513T>C synonymous_variant 0.21 isoniazid Uncertain significance
kasA 2518636 c.522C>T synonymous_variant 0.21 isoniazid Uncertain significance
kasA 2518642 c.528A>G synonymous_variant 0.21 isoniazid Uncertain significance
kasA 2518645 c.531G>C synonymous_variant 0.21 isoniazid Uncertain significance
kasA 2518672 c.558G>C synonymous_variant 0.23 isoniazid Uncertain significance
kasA 2518678 c.564C>T synonymous_variant 0.23 isoniazid Uncertain significance
kasA 2518684 c.570C>G synonymous_variant 0.24 isoniazid Uncertain significance
kasA 2518688 p.Val192Phe missense_variant 0.23 isoniazid Uncertain significance
kasA 2518702 c.588C>T synonymous_variant 0.24 isoniazid Uncertain significance
kasA 2518705 c.591T>G synonymous_variant 0.23 isoniazid Uncertain significance
kasA 2518711 c.597A>G synonymous_variant 0.22 isoniazid Uncertain significance
kasA 2518714 c.600A>C synonymous_variant 0.24 isoniazid Uncertain significance
kasA 2518723 c.609G>A synonymous_variant 0.25 isoniazid Uncertain significance
kasA 2518747 c.633C>G synonymous_variant 0.21 isoniazid Uncertain significance
kasA 2518759 c.645C>G synonymous_variant 0.2 isoniazid Uncertain significance
kasA 2518768 c.654C>G synonymous_variant 0.19 isoniazid Uncertain significance
kasA 2518777 c.663C>T synonymous_variant 0.19 isoniazid Uncertain significance
kasA 2518783 c.669T>C synonymous_variant 0.18 isoniazid Uncertain significance
kasA 2518789 c.675G>C synonymous_variant 0.17 isoniazid Uncertain significance
kasA 2518795 c.681C>G synonymous_variant 0.16 isoniazid Uncertain significance
kasA 2518825 c.711T>C synonymous_variant 0.16 isoniazid Uncertain significance
kasA 2518834 c.720C>T synonymous_variant 0.16 isoniazid Uncertain significance
kasA 2518837 c.723G>A synonymous_variant 0.16 isoniazid Uncertain significance
kasA 2518843 c.729T>C synonymous_variant 0.16 isoniazid Uncertain significance
kasA 2518847 p.Leu245Met missense_variant 0.15 isoniazid Uncertain significance
kasA 2518853 p.Leu247Ile missense_variant 0.16 isoniazid Uncertain significance
folC 2746551 p.Ile350Leu missense_variant 0.18 para-aminosalicylic_acid Uncertain significance
folC 2746564 c.1035A>G synonymous_variant 0.17 para-aminosalicylic_acid Uncertain significance
Rv2477c 2782981 c.1062G>C synonymous_variant 0.17 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2782984 c.1059T>C synonymous_variant 0.17 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783002 c.1041T>C synonymous_variant 0.18 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783008 c.1035C>G synonymous_variant 0.18 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783013 c.1030T>C synonymous_variant 0.18 amikacin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
kanamycin Not assoc w R - Interim
levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
rifampicin Not assoc w R - Interim
streptomycin Not assoc w R - Interim
Rv2477c 2783015 p.Ser343Thr missense_variant 0.19 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783020 c.1023G>C synonymous_variant 0.19 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783040 p.Ala335Thr missense_variant 0.21 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783044 c.999G>C synonymous_variant 0.21 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783059 c.984T>C synonymous_variant 0.22 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783065 c.978C>T synonymous_variant 0.23 amikacin Uncertain significance
ethambutol Not assoc w R - Interim
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Not assoc w R - Interim
streptomycin Not assoc w R - Interim
Rv2477c 2783077 c.966T>C synonymous_variant 0.25 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783086 c.957C>T synonymous_variant 0.26 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783092 c.951A>G synonymous_variant 0.23 amikacin Uncertain significance
ethambutol Not assoc w R - Interim
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Not assoc w R - Interim
streptomycin Uncertain significance
Rv2477c 2783095 c.948C>G synonymous_variant 0.22 amikacin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
kanamycin Not assoc w R - Interim
levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
rifampicin Not assoc w R
streptomycin Not assoc w R - Interim
Rv2477c 2783098 c.945C>A synonymous_variant 0.22 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783101 c.942G>C synonymous_variant 0.23 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783107 c.936G>C synonymous_variant 0.23 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783116 c.927T>C synonymous_variant 0.23 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783140 c.903C>G synonymous_variant 0.21 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783149 c.894G>C synonymous_variant 0.2 amikacin Not assoc w R - Interim
ethambutol Uncertain significance
kanamycin Not assoc w R - Interim
levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
rifampicin Not assoc w R - Interim
streptomycin Uncertain significance
Rv2477c 2783158 c.885A>C synonymous_variant 0.19 amikacin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
kanamycin Not assoc w R - Interim
levofloxacin Not assoc w R - Interim
moxifloxacin Uncertain significance
rifampicin Not assoc w R - Interim
streptomycin Uncertain significance
Rv2477c 2783182 c.861C>G synonymous_variant 0.17 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783341 c.702C>A synonymous_variant 0.16 amikacin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
kanamycin Not assoc w R - Interim
levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
rifampicin Not assoc w R - Interim
streptomycin Uncertain significance
Rv2477c 2783344 c.699C>G synonymous_variant 0.16 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783395 c.648T>G synonymous_variant 0.16 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783422 c.621T>C synonymous_variant 0.19 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783425 p.Pro206Ala missense_variant 0.19 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783432 c.610_611delAGinsTC synonymous_variant 0.2 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783434 c.609C>T synonymous_variant 0.2 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783437 c.606G>C synonymous_variant 0.2 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783440 c.603T>C synonymous_variant 0.2 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783461 c.582T>C synonymous_variant 0.23 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783464 c.579A>G synonymous_variant 0.24 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783467 c.576G>C synonymous_variant 0.24 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783473 c.570A>G synonymous_variant 0.23 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783499 c.544T>C synonymous_variant 0.22 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783502 c.541T>C synonymous_variant 0.22 amikacin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
kanamycin Not assoc w R - Interim
levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
rifampicin Not assoc w R - Interim
streptomycin Not assoc w R - Interim
Rv2477c 2783512 c.531A>G synonymous_variant 0.21 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783520 c.523T>C synonymous_variant 0.21 amikacin Uncertain significance
ethambutol Not assoc w R - Interim
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Not assoc w R - Interim
streptomycin Uncertain significance
Rv2477c 2783527 c.516A>G synonymous_variant 0.19 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783563 c.480A>G synonymous_variant 0.15 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783572 c.471A>G synonymous_variant 0.16 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783586 p.Ala153Pro missense_variant 0.17 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783593 c.450T>C synonymous_variant 0.18 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783605 c.438T>C synonymous_variant 0.18 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783620 c.423C>G synonymous_variant 0.17 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783628 p.Ala139Ser missense_variant 0.17 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783629 c.414C>T synonymous_variant 0.17 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783641 c.402G>A synonymous_variant 0.18 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783674 c.369T>C synonymous_variant 0.16 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783683 c.360A>G synonymous_variant 0.17 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783695 c.348C>T synonymous_variant 0.19 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783700 p.Thr115Ser missense_variant 0.18 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783719 c.324A>G synonymous_variant 0.18 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2477c 2783751 p.Ile98Val missense_variant 0.17 amikacin Uncertain significance
ethambutol Uncertain significance
kanamycin Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
Rv2680 2996034 c.-71G>A upstream_gene_variant 0.16 capreomycin Uncertain significance
Rv2680 2996136 p.Ser11Asn missense_variant 0.23 capreomycin Uncertain significance
thyX 3067442 c.504C>T synonymous_variant 0.15 para-aminosalicylic_acid Uncertain significance
ald 3086788 c.-32T>C upstream_gene_variant 1.0 cycloserine Uncertain significance
lpqB 3624125 c.786A>G synonymous_variant 0.17 bedaquiline Uncertain significance
rifampicin Uncertain significance
lpqB 3624133 c.778A>C synonymous_variant 0.17 bedaquiline Uncertain significance
rifampicin Uncertain significance
lpqB 3624166 p.Met249Leu missense_variant 0.17 bedaquiline Uncertain significance
rifampicin Uncertain significance
lpqB 3624179 c.732C>G synonymous_variant 0.16 bedaquiline Uncertain significance
rifampicin Uncertain significance
mtrB 3625065 p.Met517Leu missense_variant 1.0 bedaquiline Uncertain significance
rifampicin Not assoc w R
mtrB 3625656 c.958T>C synonymous_variant 0.2 bedaquiline Not assoc w R - Interim
rifampicin Not assoc w R - Interim
lpqB 3625663 c.-753G>C upstream_gene_variant 0.2 bedaquiline Uncertain significance
rifampicin Uncertain significance
lpqB 3625687 c.-777G>C upstream_gene_variant 0.21 bedaquiline Uncertain significance
rifampicin Uncertain significance
lpqB 3625690 c.-780T>C upstream_gene_variant 0.21 bedaquiline Uncertain significance
rifampicin Uncertain significance
mtrB 3625705 c.909C>G synonymous_variant 0.2 bedaquiline Uncertain significance
rifampicin Not assoc w R - Interim
mtrB 3625711 c.903C>T synonymous_variant 0.18 bedaquiline Uncertain significance
rifampicin Not assoc w R - Interim
lpqB 3625714 c.-804C>T upstream_gene_variant 0.18 bedaquiline Uncertain significance
rifampicin Uncertain significance
mtrB 3625720 c.894G>C synonymous_variant 0.18 bedaquiline Uncertain significance
rifampicin Not assoc w R - Interim
mtrB 3625729 c.885A>G synonymous_variant 0.17 bedaquiline Uncertain significance
rifampicin Not assoc w R - Interim
mtrB 3625732 c.882C>T synonymous_variant 0.17 bedaquiline Uncertain significance
rifampicin Not assoc w R - Interim
lpqB 3625735 c.-825C>T upstream_gene_variant 0.17 bedaquiline Uncertain significance
rifampicin Uncertain significance
mtrB 3625755 p.Ala287Thr missense_variant 0.18 bedaquiline Uncertain significance
rifampicin Uncertain significance
mtrB 3625762 c.852A>T synonymous_variant 0.17 bedaquiline Uncertain significance
rifampicin Not assoc w R - Interim
mtrB 3625765 c.849C>G synonymous_variant 0.17 bedaquiline Uncertain significance
rifampicin Not assoc w R - Interim
lpqB 3625768 c.-858G>C upstream_gene_variant 0.16 bedaquiline Uncertain significance
rifampicin Uncertain significance
lpqB 3625786 c.-876C>T upstream_gene_variant 0.16 bedaquiline Uncertain significance
rifampicin Uncertain significance
mtrB 3625797 p.Val273Met missense_variant 0.15 bedaquiline Uncertain significance
rifampicin Uncertain significance
mtrB 3625852 c.762A>G synonymous_variant 0.17 bedaquiline Uncertain significance
rifampicin Not assoc w R - Interim
mtrB 3625855 c.759G>A synonymous_variant 0.17 bedaquiline Uncertain significance
rifampicin Not assoc w R - Interim
lpqB 3625864 c.-954T>G upstream_gene_variant 0.16 bedaquiline Uncertain significance
rifampicin Uncertain significance
mtrB 3625876 c.738G>C synonymous_variant 0.15 bedaquiline Uncertain significance
rifampicin Not assoc w R - Interim
mtrB 3625888 c.726G>A synonymous_variant 0.15 bedaquiline Uncertain significance
rifampicin Not assoc w R - Interim
mtrB 3626119 c.495C>T synonymous_variant 0.19 bedaquiline Uncertain significance
rifampicin Not assoc w R - Interim
mtrB 3626125 c.489C>G synonymous_variant 0.19 bedaquiline Uncertain significance
rifampicin Uncertain significance
mtrB 3626134 c.480C>G synonymous_variant 0.19 bedaquiline Uncertain significance
rifampicin Uncertain significance
mtrB 3626155 p.Ala153Ser missense_variant 0.17 bedaquiline Uncertain significance
rifampicin Uncertain significance
mtrB 3626158 p.Asn152Ser missense_variant 0.16 bedaquiline Uncertain significance
rifampicin Uncertain significance
mtrB 3626170 c.444T>C synonymous_variant 0.16 bedaquiline Uncertain significance
rifampicin Uncertain significance
mtrB 3626866 c.-253T>C upstream_gene_variant 0.17 bedaquiline Uncertain significance
rifampicin Uncertain significance
mtrB 3626891 c.-278G>C upstream_gene_variant 0.17 bedaquiline Uncertain significance
rifampicin Uncertain significance
mtrB 3626903 c.-290T>C upstream_gene_variant 0.19 bedaquiline Uncertain significance
rifampicin Uncertain significance
mtrB 3626912 c.-299T>G upstream_gene_variant 0.2 bedaquiline Uncertain significance
rifampicin Uncertain significance
mtrB 3626930 c.-317A>G upstream_gene_variant 0.2 bedaquiline Uncertain significance
rifampicin Uncertain significance
mtrA 3626939 c.411A>G synonymous_variant 0.2 bedaquiline Uncertain significance
rifampicin Not assoc w R - Interim
mtrB 3626942 c.-329A>C upstream_gene_variant 0.2 bedaquiline Uncertain significance
rifampicin Uncertain significance
mtrB 3626972 c.-359A>G upstream_gene_variant 0.19 bedaquiline Uncertain significance
rifampicin Uncertain significance
mtrB 3626987 c.-374C>G upstream_gene_variant 0.17 bedaquiline Uncertain significance
rifampicin Uncertain significance
mtrB 3627008 c.-395G>C upstream_gene_variant 0.18 bedaquiline Uncertain significance
rifampicin Uncertain significance
mtrB 3627011 c.-398T>G upstream_gene_variant 0.19 bedaquiline Uncertain significance
rifampicin Uncertain significance
mtrB 3627023 c.-410C>G upstream_gene_variant 0.2 bedaquiline Uncertain significance
rifampicin Uncertain significance
mtrA 3627056 c.294C>T synonymous_variant 0.22 bedaquiline Uncertain significance
rifampicin Not assoc w R - Interim
mtrB 3627065 c.-452G>C upstream_gene_variant 0.2 bedaquiline Uncertain significance
rifampicin Uncertain significance
mtrA 3627068 c.282T>C synonymous_variant 0.2 bedaquiline Uncertain significance
rifampicin Not assoc w R - Interim
mtrB 3627074 c.-461G>C upstream_gene_variant 0.21 bedaquiline Uncertain significance
rifampicin Uncertain significance
mtrA 3627080 c.270T>C synonymous_variant 0.22 bedaquiline Uncertain significance
rifampicin Not assoc w R - Interim
mtrB 3627083 c.-470G>C upstream_gene_variant 0.22 bedaquiline Uncertain significance
rifampicin Uncertain significance
mtrA 3627098 c.252A>C synonymous_variant 0.22 bedaquiline Uncertain significance
rifampicin Not assoc w R - Interim
mtrB 3627104 c.-491C>G upstream_gene_variant 0.21 bedaquiline Uncertain significance
rifampicin Uncertain significance
mtrA 3627119 c.231T>G synonymous_variant 0.18 bedaquiline Uncertain significance
rifampicin Not assoc w R - Interim
mtrB 3627122 c.-509T>C upstream_gene_variant 0.18 bedaquiline Uncertain significance
rifampicin Uncertain significance
mtrB 3627128 c.-515T>C upstream_gene_variant 0.18 bedaquiline Uncertain significance
rifampicin Uncertain significance
mtrB 3627167 c.-554T>C upstream_gene_variant 0.19 bedaquiline Uncertain significance
rifampicin Uncertain significance
mtrB 3627170 c.-557C>G upstream_gene_variant 0.19 bedaquiline Uncertain significance
rifampicin Uncertain significance
mtrB 3627182 c.-569T>C upstream_gene_variant 0.17 bedaquiline Uncertain significance
rifampicin Uncertain significance
mtrA 3627188 c.162A>G synonymous_variant 0.18 bedaquiline Uncertain significance
rifampicin Not assoc w R - Interim
mtrA 3627221 c.129C>T synonymous_variant 0.17 bedaquiline Uncertain significance
rifampicin Not assoc w R - Interim
mtrA 3627227 c.123T>C synonymous_variant 0.17 bedaquiline Uncertain significance
rifampicin Not assoc w R - Interim
rpoA 3877770 c.738A>G synonymous_variant 0.15 rifampicin Not assoc w R - Interim
rpoA 3877983 c.525C>A synonymous_variant 0.16 rifampicin Uncertain significance
rpoA 3878022 c.486T>C synonymous_variant 0.15 rifampicin Uncertain significance
rpoA 3878028 c.480G>C synonymous_variant 0.15 rifampicin Uncertain significance
rpoA 3878163 c.345C>T synonymous_variant 0.16 rifampicin Not assoc w R - Interim
rpoA 3878169 c.339G>C synonymous_variant 0.17 rifampicin Not assoc w R - Interim
rpoA 3878184 c.324C>G synonymous_variant 0.18 rifampicin Uncertain significance
rpoA 3878187 c.321C>G synonymous_variant 0.19 rifampicin Uncertain significance
rpoA 3878193 c.315T>C synonymous_variant 0.21 rifampicin Not assoc w R - Interim
rpoA 3878205 c.303T>C synonymous_variant 0.22 rifampicin Not assoc w R - Interim
rpoA 3878217 c.291A>G synonymous_variant 0.22 rifampicin Not assoc w R - Interim
rpoA 3878247 c.261G>C synonymous_variant 0.22 rifampicin Uncertain significance
rpoA 3878271 c.237T>C synonymous_variant 0.21 rifampicin Not assoc w R - Interim
rpoA 3878276 c.232C>T synonymous_variant 0.22 rifampicin Not assoc w R - Interim
rpoA 3878283 p.Glu75Ala missense_variant 0.22 rifampicin Uncertain significance
rpoA 3878292 c.216T>C synonymous_variant 0.2 rifampicin Not assoc w R - Interim
rpoA 3878298 c.210A>G synonymous_variant 0.19 rifampicin Not assoc w R - Interim
rpoA 3878304 c.204G>T synonymous_variant 0.19 rifampicin Uncertain significance
rpoA 3878307 c.201C>G synonymous_variant 0.18 rifampicin Uncertain significance
rpoA 3878313 c.195G>C synonymous_variant 0.18 rifampicin Not assoc w R - Interim
rpoA 3878322 c.186A>G synonymous_variant 0.17 rifampicin Not assoc w R - Interim
rpoA 3878331 c.177A>G synonymous_variant 0.17 rifampicin Not assoc w R - Interim
rpoA 3878334 c.174T>C synonymous_variant 0.18 rifampicin Not assoc w R - Interim
rpoA 3878337 c.171T>C synonymous_variant 0.18 rifampicin Not assoc w R - Interim
rpoA 3878346 c.162T>C synonymous_variant 0.19 rifampicin Uncertain significance
rpoA 3878364 c.144A>T synonymous_variant 0.17 rifampicin Uncertain significance
rpoA 3878367 c.141C>G synonymous_variant 0.16 rifampicin Uncertain significance
rpoA 3878385 c.123C>G synonymous_variant 0.16 rifampicin Uncertain significance
rpoA 3878388 c.120C>G synonymous_variant 0.15 rifampicin Uncertain significance
rpoA 3878391 c.117T>C synonymous_variant 0.15 rifampicin Uncertain significance
rpoA 3878396 c.112C>T synonymous_variant 0.16 rifampicin Uncertain significance
rpoA 3878672 c.-165A>T upstream_gene_variant 0.16 rifampicin Uncertain significance
rpoA 3878683 c.-176G>C upstream_gene_variant 0.19 rifampicin Uncertain significance
rpoA 3878698 c.-191A>G upstream_gene_variant 0.18 rifampicin Uncertain significance
rpoA 3878701 c.-194C>G upstream_gene_variant 0.18 rifampicin Uncertain significance
rpoA 3878716 c.-209C>G upstream_gene_variant 0.21 rifampicin Uncertain significance
rpoA 3878725 c.-218A>G upstream_gene_variant 0.18 rifampicin Uncertain significance
rpoA 3878734 c.-229_-227delATCinsGTG upstream_gene_variant 0.17 rifampicin Uncertain significance
rpoA 3878737 c.-230G>C upstream_gene_variant 0.17 rifampicin Uncertain significance
rpoA 3878742 c.-235G>A upstream_gene_variant 0.17 rifampicin Uncertain significance
rpoA 3878746 c.-239A>G upstream_gene_variant 0.17 rifampicin Uncertain significance
rpoA 3878749 c.-242G>T upstream_gene_variant 0.17 rifampicin Uncertain significance
rpoA 3878764 c.-257A>G upstream_gene_variant 0.2 rifampicin Uncertain significance
rpoA 3878785 c.-278T>C upstream_gene_variant 0.21 rifampicin Uncertain significance
rpoA 3878788 c.-281G>C upstream_gene_variant 0.19 rifampicin Uncertain significance
rpoA 3878806 c.-299C>G upstream_gene_variant 0.18 rifampicin Uncertain significance
rpoA 3878809 c.-302T>C upstream_gene_variant 0.19 rifampicin Uncertain significance
rpoA 3878824 c.-317G>C upstream_gene_variant 0.2 rifampicin Uncertain significance
rpoA 3878833 c.-326C>G upstream_gene_variant 0.17 rifampicin Uncertain significance
rpoA 3878836 c.-331_-329delAAGinsGGC upstream_gene_variant 0.17 rifampicin Uncertain significance
rpoA 3878853 c.-346G>A upstream_gene_variant 0.22 rifampicin Uncertain significance
rpoA 3878878 c.-371T>C upstream_gene_variant 0.19 rifampicin Uncertain significance
rpoA 3878884 c.-377C>G upstream_gene_variant 0.21 rifampicin Uncertain significance
rpoA 3878909 c.-402A>G upstream_gene_variant 0.22 rifampicin Uncertain significance
rpoA 3878914 c.-407T>C upstream_gene_variant 0.21 rifampicin Uncertain significance
rpoA 3878917 c.-410G>A upstream_gene_variant 0.22 rifampicin Uncertain significance
rpoA 3878935 c.-428C>T upstream_gene_variant 0.2 rifampicin Uncertain significance
rpoA 3878938 c.-431T>G upstream_gene_variant 0.21 rifampicin Uncertain significance
rpoA 3878947 c.-440G>C upstream_gene_variant 0.22 rifampicin Uncertain significance
rpoA 3878953 c.-446C>T upstream_gene_variant 0.22 rifampicin Uncertain significance
rpoA 3878962 c.-455G>C upstream_gene_variant 0.22 rifampicin Uncertain significance
rpoA 3878968 c.-461T>C upstream_gene_variant 0.22 rifampicin Uncertain significance
rpoA 3878974 c.-469_-467delATCinsGTG upstream_gene_variant 0.23 rifampicin Uncertain significance
rpoA 3878998 c.-491C>G upstream_gene_variant 0.18 rifampicin Uncertain significance
rpoA 3879004 c.-499_-497delAAGinsCGC upstream_gene_variant 0.17 rifampicin Uncertain significance
rpoA 3879013 c.-506A>G upstream_gene_variant 0.17 rifampicin Uncertain significance
rpoA 3879028 c.-521C>T upstream_gene_variant 0.17 rifampicin Uncertain significance
rpoA 3879037 c.-530G>C upstream_gene_variant 0.17 rifampicin Uncertain significance
rpoA 3879061 c.-554C>T upstream_gene_variant 0.15 rifampicin Uncertain significance
clpC1 4038388 c.2317T>C synonymous_variant 0.17 pyrazinamide Uncertain significance
clpC1 4038392 c.2313C>T synonymous_variant 0.18 pyrazinamide Uncertain significance
clpC1 4038398 c.2307G>T synonymous_variant 0.17 pyrazinamide Uncertain significance
clpC1 4038403 c.2302T>C synonymous_variant 0.18 pyrazinamide Not assoc w R - Interim
clpC1 4038419 c.2286T>C synonymous_variant 0.2 pyrazinamide Uncertain significance
clpC1 4038433 c.2272C>T synonymous_variant 0.21 pyrazinamide Uncertain significance
clpC1 4038444 p.Ala754Lys missense_variant 0.19 pyrazinamide Uncertain significance
clpC1 4038446 c.2259T>C synonymous_variant 0.19 pyrazinamide Uncertain significance
clpC1 4038456 p.Val750Glu missense_variant 0.19 pyrazinamide Uncertain significance
clpC1 4038458 c.2247G>C synonymous_variant 0.2 pyrazinamide Uncertain significance
clpC1 4038461 c.2244G>C synonymous_variant 0.2 pyrazinamide Uncertain significance
clpC1 4038486 p.Gly740Thr missense_variant 0.19 pyrazinamide Uncertain significance
clpC1 4038488 c.2217C>G synonymous_variant 0.19 pyrazinamide Uncertain significance
clpC1 4038494 c.2211G>C synonymous_variant 0.19 pyrazinamide Uncertain significance
clpC1 4038498 p.Ser736Asn missense_variant 0.21 pyrazinamide Uncertain significance
clpC1 4038530 p.Glu725Asp missense_variant 0.2 pyrazinamide Uncertain significance
clpC1 4038533 p.Arg724Lys missense_variant 0.19 pyrazinamide Uncertain significance
clpC1 4038596 c.2109A>G synonymous_variant 0.17 pyrazinamide Uncertain significance
clpC1 4038623 c.2082A>G synonymous_variant 0.16 pyrazinamide Uncertain significance
clpC1 4038640 p.Asp689Asn missense_variant 0.15 pyrazinamide Uncertain significance
clpC1 4038653 c.2052C>T synonymous_variant 0.16 pyrazinamide Uncertain significance
clpC1 4038661 p.Ser682Thr missense_variant 0.15 pyrazinamide Uncertain significance
clpC1 4038671 c.2034T>C synonymous_variant 0.17 pyrazinamide Uncertain significance
clpC1 4038683 c.2022T>C synonymous_variant 0.19 pyrazinamide Not assoc w R - Interim
clpC1 4038695 c.2010C>G synonymous_variant 0.19 pyrazinamide Uncertain significance
clpC1 4038701 c.2004G>C synonymous_variant 0.2 pyrazinamide Uncertain significance
clpC1 4038704 c.2001T>C synonymous_variant 0.19 pyrazinamide Uncertain significance
clpC1 4038707 c.1998C>G synonymous_variant 0.2 pyrazinamide Uncertain significance
clpC1 4038710 c.1995G>C synonymous_variant 0.2 pyrazinamide Uncertain significance
clpC1 4038713 c.1992T>C synonymous_variant 0.2 pyrazinamide Uncertain significance
clpC1 4038740 c.1965G>C synonymous_variant 0.22 pyrazinamide Uncertain significance
clpC1 4038755 c.1950G>T synonymous_variant 0.2 pyrazinamide Uncertain significance
clpC1 4038773 c.1932T>C synonymous_variant 0.18 pyrazinamide Uncertain significance
clpC1 4038782 c.1923G>C synonymous_variant 0.19 pyrazinamide Uncertain significance
clpC1 4038790 c.1915C>T synonymous_variant 0.21 pyrazinamide Not assoc w R - Interim
clpC1 4038794 c.1911C>T synonymous_variant 0.21 pyrazinamide Uncertain significance
clpC1 4038812 c.1893T>C synonymous_variant 0.23 pyrazinamide Uncertain significance
clpC1 4038815 c.1890G>C synonymous_variant 0.23 pyrazinamide Uncertain significance
clpC1 4038878 c.1827A>G synonymous_variant 0.21 pyrazinamide Not assoc w R - Interim
clpC1 4038890 c.1815G>A synonymous_variant 0.22 pyrazinamide Uncertain significance
clpC1 4038908 c.1797C>G synonymous_variant 0.21 pyrazinamide Uncertain significance
clpC1 4038914 c.1791G>C synonymous_variant 0.21 pyrazinamide Uncertain significance
clpC1 4038917 c.1788C>T synonymous_variant 0.22 pyrazinamide Uncertain significance
clpC1 4038923 c.1780_1782delCTAinsTTG synonymous_variant 0.21 pyrazinamide Uncertain significance
clpC1 4038953 c.1752A>G synonymous_variant 0.22 pyrazinamide Uncertain significance
clpC1 4038965 c.1740T>C synonymous_variant 0.2 pyrazinamide Uncertain significance
clpC1 4038971 c.1734T>C synonymous_variant 0.18 pyrazinamide Uncertain significance
clpC1 4038974 c.1731T>C synonymous_variant 0.18 pyrazinamide Not assoc w R - Interim
clpC1 4038989 c.1716T>C synonymous_variant 0.19 pyrazinamide Uncertain significance
clpC1 4038997 c.1708T>C synonymous_variant 0.19 pyrazinamide Not assoc w R - Interim
clpC1 4039022 c.1683A>G synonymous_variant 0.19 pyrazinamide Uncertain significance
clpC1 4039064 c.1641C>T synonymous_variant 0.19 pyrazinamide Uncertain significance
clpC1 4039094 c.1611C>G synonymous_variant 0.18 pyrazinamide Uncertain significance
clpC1 4039103 c.1602T>C synonymous_variant 0.17 pyrazinamide Uncertain significance
clpC1 4039106 c.1599G>C synonymous_variant 0.16 pyrazinamide Uncertain significance
clpC1 4039112 c.1593C>G synonymous_variant 0.16 pyrazinamide Uncertain significance
clpC1 4039142 c.1563A>G synonymous_variant 0.16 pyrazinamide Uncertain significance
clpC1 4039178 c.1527G>C synonymous_variant 0.16 pyrazinamide Uncertain significance
clpC1 4039183 c.1522T>C synonymous_variant 0.17 pyrazinamide Uncertain significance
clpC1 4039208 c.1497C>G synonymous_variant 0.17 pyrazinamide Uncertain significance
clpC1 4039274 c.1431G>C synonymous_variant 0.16 pyrazinamide Not assoc w R - Interim
clpC1 4039277 c.1428C>T synonymous_variant 0.16 pyrazinamide Uncertain significance
clpC1 4039283 c.1422C>T synonymous_variant 0.14 pyrazinamide Uncertain significance
clpC1 4039298 c.1407T>C synonymous_variant 0.17 pyrazinamide Uncertain significance
clpC1 4039338 p.Thr456Lys missense_variant 0.14 pyrazinamide Uncertain significance
clpC1 4039364 c.1341C>G synonymous_variant 0.16 pyrazinamide Uncertain significance
clpC1 4039391 c.1314T>G synonymous_variant 0.18 pyrazinamide Uncertain significance
clpC1 4039409 c.1296T>C synonymous_variant 0.18 pyrazinamide Uncertain significance
clpC1 4039412 c.1293T>G synonymous_variant 0.19 pyrazinamide Uncertain significance
clpC1 4039430 c.1275T>C synonymous_variant 0.2 pyrazinamide Uncertain significance
clpC1 4039442 c.1263A>G synonymous_variant 0.2 pyrazinamide Uncertain significance
clpC1 4039454 c.1251A>G synonymous_variant 0.2 pyrazinamide Not assoc w R - Interim
clpC1 4039463 c.1242C>G synonymous_variant 0.19 pyrazinamide Uncertain significance
clpC1 4039466 c.1239T>G synonymous_variant 0.19 pyrazinamide Uncertain significance
clpC1 4039469 c.1236T>C synonymous_variant 0.19 pyrazinamide Uncertain significance
clpC1 4039472 c.1233G>C synonymous_variant 0.19 pyrazinamide Uncertain significance
clpC1 4039481 c.1224T>C synonymous_variant 0.21 pyrazinamide Uncertain significance
clpC1 4039484 c.1221T>C synonymous_variant 0.21 pyrazinamide Uncertain significance
clpC1 4039556 c.1149G>C synonymous_variant 0.21 pyrazinamide Uncertain significance
clpC1 4039559 c.1146C>G synonymous_variant 0.21 pyrazinamide Uncertain significance
clpC1 4039574 p.Ala377Gly missense_variant 0.2 pyrazinamide Uncertain significance
clpC1 4039577 c.1128T>C synonymous_variant 0.2 pyrazinamide Not assoc w R - Interim
clpC1 4039586 c.1119G>C synonymous_variant 0.23 pyrazinamide Uncertain significance
clpC1 4039601 c.1104G>A synonymous_variant 0.2 pyrazinamide Uncertain significance
clpC1 4039610 c.1095G>T synonymous_variant 0.21 pyrazinamide Uncertain significance
clpC1 4039616 c.1089G>C synonymous_variant 0.2 pyrazinamide Uncertain significance
clpC1 4039622 c.1083C>T synonymous_variant 0.2 pyrazinamide Uncertain significance
clpC1 4039661 c.1044T>C synonymous_variant 0.19 pyrazinamide Uncertain significance
clpC1 4039670 c.1035G>C synonymous_variant 0.19 pyrazinamide Uncertain significance
clpC1 4039673 c.1032G>C synonymous_variant 0.18 pyrazinamide Uncertain significance
clpC1 4039724 c.981A>G synonymous_variant 0.22 pyrazinamide Uncertain significance
clpC1 4039748 c.957G>C synonymous_variant 0.19 pyrazinamide Uncertain significance
clpC1 4039751 c.954A>G synonymous_variant 0.18 pyrazinamide Uncertain significance
clpC1 4039757 c.948A>G synonymous_variant 0.17 pyrazinamide Uncertain significance
clpC1 4039760 c.945T>C synonymous_variant 0.16 pyrazinamide Uncertain significance
clpC1 4039766 c.939T>C synonymous_variant 0.16 pyrazinamide Uncertain significance
clpC1 4039769 c.936C>G synonymous_variant 0.16 pyrazinamide Uncertain significance
clpC1 4039775 c.930G>C synonymous_variant 0.17 pyrazinamide Uncertain significance
clpC1 4039778 c.927A>G synonymous_variant 0.16 pyrazinamide Uncertain significance
clpC1 4039787 p.Ser306Thr missense_variant 0.16 pyrazinamide Uncertain significance
clpC1 4039790 c.915C>G synonymous_variant 0.16 pyrazinamide Uncertain significance
clpC1 4039814 c.891C>G synonymous_variant 0.17 pyrazinamide Uncertain significance
clpC1 4039817 c.888A>C synonymous_variant 0.16 pyrazinamide Not assoc w R - Interim
clpC1 4039820 c.885T>G synonymous_variant 0.16 pyrazinamide Uncertain significance
clpC1 4039831 c.874T>C synonymous_variant 0.18 pyrazinamide Uncertain significance
clpC1 4039850 c.855T>C synonymous_variant 0.21 pyrazinamide Uncertain significance
clpC1 4039865 c.840T>C synonymous_variant 0.2 pyrazinamide Uncertain significance
clpC1 4039898 c.807C>G synonymous_variant 0.2 pyrazinamide Uncertain significance
clpC1 4039904 c.801A>G synonymous_variant 0.19 pyrazinamide Uncertain significance
clpC1 4039931 c.774T>C synonymous_variant 0.17 pyrazinamide Uncertain significance
clpC1 4039946 c.759A>T synonymous_variant 0.16 pyrazinamide Uncertain significance
clpC1 4039952 c.753T>C synonymous_variant 0.16 pyrazinamide Uncertain significance
clpC1 4039979 c.726C>G synonymous_variant 0.16 pyrazinamide Uncertain significance
clpC1 4040021 c.684A>C synonymous_variant 0.16 pyrazinamide Not assoc w R - Interim
clpC1 4040030 c.675C>G synonymous_variant 0.16 pyrazinamide Uncertain significance
clpC1 4040033 c.672G>C synonymous_variant 0.16 pyrazinamide Uncertain significance
clpC1 4040042 c.663C>T synonymous_variant 0.18 pyrazinamide Not assoc w R - Interim
clpC1 4040105 c.600C>G synonymous_variant 0.17 pyrazinamide Uncertain significance
clpC1 4040162 c.543G>C synonymous_variant 0.16 pyrazinamide Not assoc w R - Interim
clpC1 4040171 c.534C>G synonymous_variant 0.17 pyrazinamide Uncertain significance
clpC1 4040201 c.504C>G synonymous_variant 0.16 pyrazinamide Uncertain significance
clpC1 4040213 p.Ser164Thr missense_variant 0.16 pyrazinamide Uncertain significance
clpC1 4040225 c.480A>C synonymous_variant 0.16 pyrazinamide Uncertain significance
clpC1 4040228 c.477G>C synonymous_variant 0.16 pyrazinamide Uncertain significance
clpC1 4040237 c.468C>T synonymous_variant 0.19 pyrazinamide Uncertain significance
clpC1 4040243 c.462C>A synonymous_variant 0.18 pyrazinamide Uncertain significance
clpC1 4040249 c.456A>G synonymous_variant 0.18 pyrazinamide Uncertain significance
clpC1 4040252 c.453C>G synonymous_variant 0.19 pyrazinamide Uncertain significance
clpC1 4040267 c.438A>G synonymous_variant 0.18 pyrazinamide Not assoc w R - Interim
clpC1 4040273 c.432T>C synonymous_variant 0.17 pyrazinamide Not assoc w R - Interim
clpC1 4040278 p.Ser143Thr missense_variant 0.16 pyrazinamide Uncertain significance
clpC1 4040279 c.426C>G synonymous_variant 0.16 pyrazinamide Not assoc w R - Interim
clpC1 4040284 c.421C>T synonymous_variant 0.17 pyrazinamide Uncertain significance
clpC1 4040300 c.405C>T synonymous_variant 0.2 pyrazinamide Uncertain significance
clpC1 4040315 c.390G>A synonymous_variant 0.2 pyrazinamide Uncertain significance
clpC1 4040330 c.375C>G synonymous_variant 0.19 pyrazinamide Uncertain significance
clpC1 4040342 c.363C>G synonymous_variant 0.17 pyrazinamide Uncertain significance
clpC1 4040354 c.351A>G synonymous_variant 0.18 pyrazinamide Uncertain significance
clpC1 4040363 c.342A>C synonymous_variant 0.18 pyrazinamide Uncertain significance
clpC1 4040369 c.336C>G synonymous_variant 0.19 pyrazinamide Uncertain significance
clpC1 4040393 c.312G>C synonymous_variant 0.17 pyrazinamide Not assoc w R - Interim
clpC1 4040408 c.297C>T synonymous_variant 0.17 pyrazinamide Uncertain significance
clpC1 4040411 c.294T>C synonymous_variant 0.16 pyrazinamide Not assoc w R - Interim
clpC1 4040426 c.279T>C synonymous_variant 0.16 pyrazinamide Uncertain significance
clpC1 4040431 c.274T>C synonymous_variant 0.17 pyrazinamide Uncertain significance
clpC1 4040444 c.261C>T synonymous_variant 0.18 pyrazinamide Uncertain significance
clpC1 4040450 c.255A>G synonymous_variant 0.18 pyrazinamide Not assoc w R - Interim
clpC1 4040462 c.243C>G synonymous_variant 0.17 pyrazinamide Uncertain significance
clpC1 4040465 c.240T>C synonymous_variant 0.17 pyrazinamide Uncertain significance
clpC1 4040477 c.228G>A synonymous_variant 0.17 pyrazinamide Uncertain significance
clpC1 4040480 c.225T>G synonymous_variant 0.17 pyrazinamide Uncertain significance
clpC1 4040486 c.219G>C synonymous_variant 0.18 pyrazinamide Uncertain significance
clpC1 4040522 c.183T>C synonymous_variant 0.16 pyrazinamide Not assoc w R - Interim
clpC1 4040528 c.177G>T synonymous_variant 0.15 pyrazinamide Uncertain significance
glpK 4138547 c.1209C>T synonymous_variant 0.15 ethambutol Not assoc w R - Interim
isoniazid Not assoc w R - Interim
levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
rifampicin Not assoc w R - Interim
streptomycin Not assoc w R - Interim
glpK 4138580 c.1176C>T synonymous_variant 0.18 ethambutol Uncertain significance
isoniazid Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
glpK 4138601 c.1155G>C synonymous_variant 0.18 ethambutol Uncertain significance
isoniazid Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
glpK 4138606 c.1150T>C synonymous_variant 0.19 ethambutol Uncertain significance
isoniazid Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
glpK 4138634 c.1122G>A synonymous_variant 0.19 ethambutol Not assoc w R - Interim
isoniazid Not assoc w R - Interim
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Not assoc w R - Interim
streptomycin Not assoc w R - Interim
glpK 4138643 c.1113A>C synonymous_variant 0.21 ethambutol Uncertain significance
isoniazid Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
glpK 4138654 c.1102C>T synonymous_variant 0.2 ethambutol Not assoc w R - Interim
isoniazid Not assoc w R - Interim
levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
rifampicin Not assoc w R - Interim
streptomycin Not assoc w R - Interim
glpK 4138655 c.1101G>A synonymous_variant 0.2 ethambutol Uncertain significance
isoniazid Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
glpK 4138667 c.1089G>C synonymous_variant 0.21 ethambutol Uncertain significance
isoniazid Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
glpK 4138670 c.1086G>T synonymous_variant 0.21 ethambutol Uncertain significance
isoniazid Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
glpK 4138679 p.Met359Val missense_variant 0.18 ethambutol Uncertain significance
isoniazid Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
glpK 4138682 c.1074C>A synonymous_variant 0.18 ethambutol Uncertain significance
isoniazid Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
glpK 4138685 c.1071C>T synonymous_variant 0.19 ethambutol Uncertain significance
isoniazid Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
glpK 4138695 p.Pro354Asp missense_variant 0.19 ethambutol Uncertain significance
isoniazid Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
glpK 4138706 c.1050C>A synonymous_variant 0.2 ethambutol Uncertain significance
isoniazid Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
glpK 4138714 p.Ala348Ser missense_variant 0.2 ethambutol Uncertain significance
isoniazid Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
glpK 4138715 c.1041G>A synonymous_variant 0.2 ethambutol Uncertain significance
isoniazid Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
glpK 4138718 c.1038T>C synonymous_variant 0.2 ethambutol Uncertain significance
isoniazid Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
glpK 4138721 c.1035G>A synonymous_variant 0.2 ethambutol Not assoc w R - Interim
isoniazid Not assoc w R - Interim
levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
rifampicin Not assoc w R - Interim
streptomycin Uncertain significance
glpK 4138724 c.1032A>G synonymous_variant 0.2 ethambutol Uncertain significance
isoniazid Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
glpK 4138757 c.999A>G synonymous_variant 0.2 ethambutol Uncertain significance
isoniazid Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
glpK 4138769 c.987G>C synonymous_variant 0.21 ethambutol Uncertain significance
isoniazid Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
glpK 4138774 p.Ser328Ala missense_variant 0.2 ethambutol Uncertain significance
isoniazid Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
glpK 4138796 c.960A>G synonymous_variant 0.17 ethambutol Uncertain significance
isoniazid Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
glpK 4138799 c.957T>C synonymous_variant 0.17 ethambutol Uncertain significance
isoniazid Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
glpK 4138805 c.951C>T synonymous_variant 0.16 ethambutol Uncertain significance
isoniazid Uncertain significance
levofloxacin Uncertain significance
moxifloxacin Uncertain significance
rifampicin Uncertain significance
streptomycin Uncertain significance
embC 4239298 c.-565C>T upstream_gene_variant 0.99 ethambutol Not assoc w R
embC 4240780 c.918T>C synonymous_variant 0.21 ethambutol Uncertain significance
embC 4240783 c.921G>C synonymous_variant 0.21 ethambutol Uncertain significance
embC 4240789 c.927T>C synonymous_variant 0.21 ethambutol Uncertain significance
embC 4240798 c.936C>T synonymous_variant 0.19 ethambutol Uncertain significance
embC 4240813 p.Phe317Leu missense_variant 0.2 ethambutol Uncertain significance
embC 4240819 c.957A>G synonymous_variant 0.19 ethambutol Uncertain significance
embC 4240831 c.969T>G synonymous_variant 0.18 ethambutol Uncertain significance
embC 4240867 c.1005T>G synonymous_variant 0.22 ethambutol Uncertain significance
embC 4240873 c.1011C>G synonymous_variant 0.23 ethambutol Uncertain significance
embC 4240880 p.Ala340Thr missense_variant 0.22 ethambutol Uncertain significance
embC 4240885 c.1023T>C synonymous_variant 0.2 ethambutol Uncertain significance
embC 4240886 p.Ile342Val missense_variant 0.19 ethambutol Uncertain significance
embC 4240897 c.1035C>G synonymous_variant 0.23 ethambutol Not assoc w R
embC 4240900 c.1038A>G synonymous_variant 0.22 ethambutol Uncertain significance
embC 4240910 p.Ala350Leu missense_variant 0.22 ethambutol Uncertain significance
embC 4240921 c.1059C>G synonymous_variant 0.21 ethambutol Uncertain significance
embC 4240924 c.1062C>G synonymous_variant 0.22 ethambutol Uncertain significance
embC 4240936 c.1074A>G synonymous_variant 0.24 ethambutol Uncertain significance
embC 4240939 c.1077C>A synonymous_variant 0.24 ethambutol Uncertain significance
embC 4240954 p.Ile364Met missense_variant 0.2 ethambutol Uncertain significance
embC 4240957 c.1095C>G synonymous_variant 0.2 ethambutol Uncertain significance
embC 4240966 c.1104G>C synonymous_variant 0.2 ethambutol Uncertain significance
embC 4240972 c.1110C>A synonymous_variant 0.18 ethambutol Uncertain significance
embC 4240978 c.1116G>A synonymous_variant 0.17 ethambutol Not assoc w R - Interim
embC 4240979 p.Thr373Gln missense_variant 0.17 ethambutol Uncertain significance
embC 4240983 p.Ser374Asn missense_variant 0.17 ethambutol Uncertain significance
embC 4240987 c.1125G>C synonymous_variant 0.17 ethambutol Uncertain significance
embC 4240990 c.1128A>G synonymous_variant 0.17 ethambutol Uncertain significance
embC 4241002 c.1140G>C synonymous_variant 0.18 ethambutol Uncertain significance
embC 4241017 c.1155T>C synonymous_variant 0.19 ethambutol Uncertain significance
embC 4241023 c.1161T>C synonymous_variant 0.21 ethambutol Uncertain significance
embC 4241026 c.1164C>T synonymous_variant 0.2 ethambutol Uncertain significance
embC 4241050 c.1188T>G synonymous_variant 0.2 ethambutol Uncertain significance
embC 4241053 c.1191G>T synonymous_variant 0.21 ethambutol Uncertain significance
embC 4241071 c.1209C>G synonymous_variant 0.18 ethambutol Uncertain significance
embC 4241086 c.1224G>C synonymous_variant 0.18 ethambutol Uncertain significance
embC 4242643 c.2781C>T synonymous_variant 0.99 ethambutol Not assoc w R
embC 4242803 p.Val981Leu missense_variant 1.0 ethambutol Not assoc w R
embA 4245377 c.2145T>G synonymous_variant 0.17 ethambutol Uncertain significance
whiB6 4338595 c.-75delG upstream_gene_variant 1.0 amikacin Not assoc w R
capreomycin Not assoc w R
kanamycin Not assoc w R
whiB6 4338732 c.-211C>T upstream_gene_variant 1.0 amikacin Uncertain significance
capreomycin Uncertain significance
kanamycin Uncertain significance