EBG00000313339 - n.1307T>C
Drug resistance types
1 Sensitive
0 RR-TB
14 HR-TB
8 MDR-TB
2 Pre-XDR-TB
2 XDR-TB
30 Other
lineage Counts
| lineage | Count |
|---|---|
| 5 | |
| lineage2.1;lineage4.9 | 4 |
| La3;lineage4.9 | 4 |
| lineage4.1.1.3 | 4 |
| lineage3 | 4 |
| lineage4.9 | 12 |
| lineage4.9;lineage6.3 | 2 |
| lineage1.2.2.2 | 1 |
| lineage4 | 2 |
| lineage4.8.1 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.2 | 2 |
| lineage4.1.2.1 | 3 |
| La3;lineage2.1;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage4.1.3 | 2 |
| lineage2.1 | 1 |
| lineage4.8 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage6.3 | 1 |
| lineage2.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 57 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR212001 | HR-TB | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | SRR1169306 | Other | La3;lineage4.9 | None | SAMEA2533358 | MDR-TB | lineage4.1.1.3 | None | ERR4797588 | MDR-TB | lineage3 | None | SRR3675248 | Other | lineage4.9 | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4816478 | HR-TB | lineage4 | None | ERR176643 | Other | La3;lineage4.9 | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR12708389 | MDR-TB | lineage4.8.1 | None | ERR3797070 | Other | lineage4.9 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR234659 | Other | None | SRR1167384 | Other | La3;lineage4.9 | None | SRR3675572 | Other | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | SRR3675232 | Other | lineage4.1.2.1 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR161034 | HR-TB | lineage4.3.4.2.1 | None | ERR2199988 | MDR-TB | lineage4.1.1.3 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | ERR4820773 | HR-TB | lineage4.9 | None | ERR2027263 | Other | lineage4 | None | SRR6789626 | Other | None | ERR553132 | MDR-TB | lineage4.1.2.1 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR3675549 | Other | lineage4.9 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | SRR7496509 | Other | None | ERR176751 | Other | lineage4.9 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | ERR2229542 | Other | lineage4.8 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | SRR3675311 | Other | lineage4.9 | None | ERR212033 | Other | lineage4.9 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR4819422 | HR-TB | lineage4.9 | None | SRR5341333 | Other | lineage2.1;lineage4.9 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR550637 | MDR-TB | lineage4.1.1.3 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | ERR9896144 | Other | lineage3 | None | SRR5341332 | Pre-XDR-TB | lineage3 | None | SRR1165628 | Other | La3;lineage4.9 | None | SRR3675448 | Other | lineage4.9 | None | SRR18910194 | HR-TB | lineage2.2.2 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4800341 | Other | lineage3 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None |
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