Rv1630 - c.252C>T
Drug resistance types
96 Sensitive
14 RR-TB
108 HR-TB
19 MDR-TB
10 Pre-XDR-TB
0 XDR-TB
116 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3.1.3 | 1 |
| lineage4 | 68 |
| lineage4.1 | 2 |
| lineage4.1.2.1 | 6 |
| lineage4.1.1.2 | 1 |
| lineage4.9.1 | 1 |
| lineage4.3.4.2.1 | 4 |
| lineage4.9 | 77 |
| 89 | |
| lineage4.3.3 | 2 |
| lineage4.8 | 6 |
| lineage3 | 7 |
| lineage4.6.2.2 | 6 |
| lineage2.2.1 | 23 |
| lineage1.1.2 | 3 |
| lineage4.9;lineage2.1 | 1 |
| La1.8.1 | 7 |
| lineage5.2 | 2 |
| lineage2.2 | 7 |
| lineage2.2.1.1 | 4 |
| La2 | 1 |
| lineage4.3.2.1 | 2 |
| lineage4.1.2 | 2 |
| lineage4.8.1 | 1 |
| lineage4.3.4 | 1 |
| lineage4.4.1.2 | 1 |
| La1 | 1 |
| lineage6.1.1 | 2 |
| lineage4;lineage3.1 | 1 |
| La1.2 | 2 |
| La1.3 | 5 |
| lineage4.9;La1.3 | 1 |
| lineage1.2.2.2 | 1 |
| lineage3.1.2 | 1 |
| lineage4.7 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.8;lineage4.1 | 2 |
| lineage6.1.3 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage4.6.1.1 | 1 |
| La3 | 1 |
| lineage4.9;lineage2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2 | 1 |
| lineage4.4 | 1 |
| lineage1.2.1.2 | 1 |
| lineage1.1.1 | 1 |
| La1.7.1 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage4.1.1.3 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage4.3 | 1 |
| lineage2.1 | 2 |
| lineage3.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 363 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2513121 | Sensitive | lineage3.1.3 | None | SRR5341366 | Sensitive | lineage4 | None | ERR2446566 | Other | lineage4.1 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR245758 | Other | lineage4.9.1 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR4818536 | Other | lineage4.9 | None | SRR5341453 | Sensitive | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341387 | Other | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341293 | HR-TB | lineage4 | None | ERR4819357 | Other | lineage4.9 | None | ERR4819462 | Other | lineage4 | None | ERR2514327 | HR-TB | lineage4.8 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341408 | Sensitive | lineage3 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341425 | Other | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR1023509 | Other | None | SRR5341310 | Other | lineage1.1.2 | None | ERR4819933 | Other | lineage4.9 | None | SRR5341313 | HR-TB | None | SRR5341315 | Sensitive | None | SRR5341467 | Other | lineage4 | None | ERR2515228 | Other | lineage2.2.1 | None | SRR5341469 | Other | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | ERR2693231 | Other | None | SRR5341470 | HR-TB | None | SRR5431730 | Other | La1.8.1 | None | ERR2693254 | Other | None | ERR2693230 | Other | None | ERR4821143 | RR-TB | lineage4.9 | None | SRR6045832 | HR-TB | lineage4.9 | None | ERR2693257 | Other | None | SRR6046141 | Other | lineage4.9 | None | SRR6045555 | HR-TB | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6046133 | HR-TB | None | ERR4872077 | Pre-XDR-TB | lineage5.2 | None | SRR6044876 | Sensitive | lineage4 | None | ERR2693232 | Other | lineage4.9 | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046397 | Other | None | ERR502510 | Sensitive | lineage4 | None | ERR4831117 | HR-TB | None | SRR6045892 | Sensitive | None | SRR6044835 | Sensitive | lineage4 | None | SRR6044890 | Other | lineage4.9 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6046210 | Other | lineage4 | None | SRR6045233 | HR-TB | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6046385 | Other | lineage4.9 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6046482 | HR-TB | None | SRR6046492 | Other | None | SRR6046594 | HR-TB | lineage4 | None | SRR6511621 | HR-TB | None | ERR323037 | HR-TB | lineage4 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR5311090 | HR-TB | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | ERR294266 | HR-TB | None | ERR502524 | HR-TB | La2 | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR6982365 | Other | lineage2.2.1 | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR323039 | HR-TB | None | ERR1063857 | HR-TB | None | ERR1035122 | Sensitive | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR323107 | Other | lineage4 | None | ERR323045 | HR-TB | None | ERR323053 | HR-TB | None | ERR323066 | Sensitive | lineage4 | None | ERR323108 | HR-TB | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR067699 | HR-TB | lineage4 | None | ERR1063855 | Other | lineage4 | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR1063896 | Sensitive | None | ERR3283024 | Other | None | ERR323115 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283014 | HR-TB | None | ERR3283025 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR133825 | Sensitive | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR3283010 | Other | La1 | None | ERR3283028 | Other | None | ERR3283032 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283040 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3283041 | Other | lineage4.9 | None | ERR3283057 | HR-TB | lineage4 | None | ERR3283047 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445503 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3797024 | Other | lineage4.9 | None | ERR3468544 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797044 | Other | None | ERR3797017 | Other | None | ERR3797015 | HR-TB | None | ERR3797014 | Other | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797043 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797048 | HR-TB | None | ERR3797061 | Other | None | ERR3797060 | Other | La1.8.1 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797063 | HR-TB | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR3797086 | Other | lineage4.9 | None | ERR3797081 | Sensitive | lineage4 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR3797087 | Sensitive | lineage4 | None | ERR405209 | Sensitive | lineage4 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR4024991 | Other | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4188350 | HR-TB | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR473332 | Other | lineage4 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769516 | Other | La1.3 | None | ERR4769552 | Other | La1.3 | None | ERR4769521 | HR-TB | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769514 | Other | La1.3 | None | ERR4797264 | Sensitive | None | ERR4796254 | Sensitive | lineage4 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR4769555 | Other | La1.3 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4798099 | Other | None | ERR4797285 | MDR-TB | lineage1.2.2.2 | None | ERR4797474 | Other | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4798504 | Other | lineage3 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4811493 | HR-TB | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR6198317 | Other | La1.2 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6358979 | Other | None | ERR6359070 | Other | lineage4.9 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6866639 | Other | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR6866410 | Sensitive | None | ERR6359069 | Other | lineage4.9 | None | ERR6866022 | Other | None | ERR6866547 | Sensitive | lineage4 | None | ERR736834 | Sensitive | lineage4 | None | ERR6866807 | HR-TB | lineage4 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR736837 | Other | lineage4.9 | None | ERR736856 | HR-TB | lineage4 | None | ERR736839 | Other | None | ERR736872 | Sensitive | lineage4 | None | ERR736865 | HR-TB | None | ERR9786507 | Sensitive | lineage4.7 | None | ERR751326 | Sensitive | lineage4 | None | ERR7821163 | Other | lineage2.2.1 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9119669 | HR-TB | None | ERR9786076 | Sensitive | lineage3 | None | ERR8976043 | HR-TB | None | ERR9119483 | Pre-XDR-TB | lineage5.2 | None | ERR9634265 | Sensitive | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR9786843 | Other | None | ERR987722 | HR-TB | None | ERR9787014 | Other | lineage6.1.1 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | ERR9896144 | Other | lineage3 | None | ERR990545 | Other | lineage3 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR10808805 | Sensitive | None | SRR10809074 | Sensitive | lineage4 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR11462861 | Other | La1.8.1 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1169249 | Other | La3 | None | SRR1167384 | Other | lineage4 | None | SRR1169306 | Other | None | SRR1173777 | Other | lineage4 | None | SRR1172310 | HR-TB | None | SRR1173568 | Other | lineage4.9 | None | SRR1172214 | HR-TB | lineage4.9 | None | SRR1172717 | Other | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1174897 | HR-TB | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR17658565 | Other | lineage3 | None | SRR1791696 | Other | La1.8.1 | None | SRR1791747 | Other | La1.8.1 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | ERR11082350 | MDR-TB | lineage4.6.2.2 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR8692807 | Other | lineage4.9 | None | SRR8692790 | RR-TB | lineage4 | None | SRR8692782 | Other | lineage4.9 | None | SRR8692822 | Other | lineage4.9 | None | SRR8692893 | Other | lineage4.9 | None | SRR8692899 | Other | lineage4.9 | None | SRR8692825 | Other | lineage4.9 | None | SRR8692882 | HR-TB | lineage4.9 | None | SRR8692887 | Other | None | ERR176778 | HR-TB | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | ERR176779 | HR-TB | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR161034 | Other | lineage4.3.4.2.1 | None | ERR1035239 | HR-TB | None | ERR4815471 | Other | lineage4.9 | None | ERR176568 | Other | lineage4.3 | None | SRR3675234 | Other | None | ERR702405 | Sensitive | lineage2.1 | None | SRR3675246 | Sensitive | lineage4 | None | ERR181824 | HR-TB | lineage4 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR212138 | HR-TB | lineage4 | None | ERR176643 | HR-TB | None | ERR176751 | HR-TB | None | ERR4816964 | Other | lineage4.9 | None | ERR4816151 | Other | lineage4.8 | None | ERR212001 | HR-TB | None | ERR176651 | HR-TB | None | ERR181887 | HR-TB | None | ERR176740 | HR-TB | None | SRR3675510 | Other | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR212033 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | ERR216965 | HR-TB | lineage4.9 | None | SRR3675571 | HR-TB | None | SRR7898221 | MDR-TB | lineage1.1.2 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR2229437 | Other | lineage4.8 | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR4818710 | Sensitive | lineage4.9 | None |
|---|
