TB-Profiler result

Run: ERR4814734

Summary

Run ID: ERR4814734

Sample name:

Date: 01-04-2023 13:27:43

Number of reads: 1093431

Percentage reads mapped: 53.96

Strain: lineage1.2.1.1

Drug-resistance: Other


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Drug resistance: This table reports drug-resistance associated mutations found in known resistance genes
Drug Resistance Supporting mutations
Lineage Table: The lineage is inferred by analysing lineage specific SNPs
Lineage Family Main Spoligotype RDs Frequency
lineage1 Indo-Oceanic EAI RD239 0.96
lineage1.2.1 Indo-Oceanic EAI2 RD239 1.0
lineage1.2.1.1 Indo-Oceanic NA RD239 0.94
Drug resistance-Associated Mutations: This table reports mutations found in candidate resistance genes which have been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs
gid 4407684 c.518dupA frameshift_variant 1.0 streptomycin
Non-Associated Mutations: This table reports mutations found in candidate resistance genes which have not been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction
gyrB 6112 p.Met291Ile missense_variant 0.93
gyrB 6142 c.903G>C synonymous_variant 0.19
gyrB 6148 c.909C>G synonymous_variant 0.2
gyrB 6175 c.936G>A synonymous_variant 0.28
gyrB 6187 c.948C>T synonymous_variant 0.26
gyrB 6196 c.957C>T synonymous_variant 0.27
gyrB 6203 c.964_966delAGCinsTCG synonymous_variant 0.26
gyrB 6214 c.975G>C synonymous_variant 0.28
gyrB 6215 p.Ser326Thr missense_variant 0.29
gyrB 6242 p.Arg335Lys missense_variant 0.28
gyrB 6250 c.1011A>T synonymous_variant 0.27
gyrB 6253 c.1014G>C synonymous_variant 0.29
gyrB 6265 c.1026C>T synonymous_variant 0.3
gyrB 6268 c.1029C>G synonymous_variant 0.3
gyrB 6280 c.1041T>C synonymous_variant 0.37
gyrB 6286 c.1047T>C synonymous_variant 0.37
gyrB 6292 c.1053G>T synonymous_variant 0.35
gyrA 6307 c.-995T>G upstream_gene_variant 0.37
gyrB 6324 c.1085_1086insGGCC frameshift_variant 0.34
gyrB 6327 c.1090_1093delGAAC frameshift_variant 0.36
gyrA 6362 c.-940_-938delTTGinsCTC upstream_gene_variant 0.36
gyrA 6367 c.-935C>T upstream_gene_variant 0.33
gyrA 6379 c.-923C>G upstream_gene_variant 0.3
gyrA 6382 c.-920A>G upstream_gene_variant 0.26
gyrA 6388 c.-914T>C upstream_gene_variant 0.24
gyrB 6398 p.Val387Ile missense_variant 0.23
gyrA 6403 c.-899T>C upstream_gene_variant 0.24
gyrA 6409 c.-893A>G upstream_gene_variant 0.22
gyrA 6703 c.-599G>C upstream_gene_variant 0.15
gyrA 6706 c.-596G>A upstream_gene_variant 0.15
gyrA 6712 c.-590G>C upstream_gene_variant 0.16
gyrA 6715 c.-587C>T upstream_gene_variant 0.15
gyrA 6745 c.-557T>C upstream_gene_variant 0.17
gyrA 6751 c.-551G>C upstream_gene_variant 0.19
gyrA 6763 c.-539G>C upstream_gene_variant 0.23
gyrA 6769 c.-533C>T upstream_gene_variant 0.22
gyrA 6775 c.-527G>C upstream_gene_variant 0.21
gyrA 6778 c.-524C>T upstream_gene_variant 0.23
gyrA 6793 c.-509T>C upstream_gene_variant 0.26
gyrB 6797 p.Gly520Ser missense_variant 0.25
gyrA 6811 c.-491C>T upstream_gene_variant 0.19
gyrA 7093 c.-209T>C upstream_gene_variant 0.2
gyrA 7099 c.-203G>A upstream_gene_variant 0.19
gyrA 7100 c.-202T>C upstream_gene_variant 0.22
gyrA 7123 c.-179C>G upstream_gene_variant 0.38
gyrA 7129 c.-173T>G upstream_gene_variant 0.39
gyrA 7132 c.-170T>G upstream_gene_variant 0.39
gyrA 7135 c.-167G>A upstream_gene_variant 0.41
gyrA 7138 c.-164G>A upstream_gene_variant 0.41
gyrA 7144 c.-158A>G upstream_gene_variant 0.41
gyrA 7153 c.-149G>C upstream_gene_variant 0.5
gyrA 7156 c.-146C>T upstream_gene_variant 0.5
gyrA 7168 c.-134C>G upstream_gene_variant 0.53
gyrA 7177 c.-125G>A upstream_gene_variant 0.41
gyrA 7178 c.-124T>C upstream_gene_variant 0.41
gyrA 7189 c.-113C>T upstream_gene_variant 0.39
gyrA 7198 c.-104C>T upstream_gene_variant 0.29
gyrA 7362 p.Glu21Gln missense_variant 1.0
gyrA 7424 c.123G>A synonymous_variant 0.29
gyrA 7433 c.132G>C synonymous_variant 0.35
gyrA 7436 c.135C>T synonymous_variant 0.35
gyrA 7442 c.141G>C synonymous_variant 0.46
gyrA 7457 c.156T>C synonymous_variant 0.39
gyrA 7460 c.159C>G synonymous_variant 0.38
gyrA 7463 c.162G>C synonymous_variant 0.41
gyrA 7472 c.171T>C synonymous_variant 0.5
gyrA 7475 c.174A>G synonymous_variant 0.49
gyrA 7480 p.Phe60Tyr missense_variant 0.45
gyrA 7484 c.183T>C synonymous_variant 0.43
gyrA 7487 c.186C>G synonymous_variant 0.45
gyrA 7499 c.198G>A synonymous_variant 0.47
gyrA 7523 c.222C>A synonymous_variant 0.42
gyrA 7526 c.225G>T synonymous_variant 0.44
gyrA 7532 c.231T>C synonymous_variant 0.44
gyrA 7541 c.240C>G synonymous_variant 0.43
gyrA 7547 c.246C>T synonymous_variant 0.42
gyrA 7569 p.Ala90Ser missense_variant 0.28
gyrA 7585 p.Ser95Thr missense_variant 1.0
gyrA 7754 p.Asp151Glu missense_variant 0.17
gyrA 7763 c.462T>C synonymous_variant 0.18
gyrA 7778 c.477G>A synonymous_variant 0.21
gyrA 7784 c.483A>G synonymous_variant 0.25
gyrA 7787 c.486G>A synonymous_variant 0.24
gyrA 7790 c.489G>C synonymous_variant 0.23
gyrA 7799 c.498A>G synonymous_variant 0.21
gyrA 7802 c.501C>G synonymous_variant 0.22
gyrA 7835 c.534A>G synonymous_variant 0.19
gyrA 7841 c.540C>T synonymous_variant 0.19
gyrA 7847 c.546G>C synonymous_variant 0.19
gyrA 7859 c.558A>C synonymous_variant 0.17
gyrA 7865 c.564T>C synonymous_variant 0.17
gyrA 7886 c.585T>C synonymous_variant 0.17
gyrA 7889 c.588G>A synonymous_variant 0.17
gyrA 7890 c.589C>T synonymous_variant 0.17
gyrA 7898 p.Asp199Glu missense_variant 0.15
gyrA 7906 p.Phe202Tyr missense_variant 0.16
gyrA 7970 c.669T>C synonymous_variant 0.15
gyrA 7979 c.678G>T synonymous_variant 0.15
gyrA 8283 p.Ile328Leu missense_variant 0.16
gyrA 8288 c.987T>C synonymous_variant 0.16
gyrA 8294 c.993T>C synonymous_variant 0.21
gyrA 8321 c.1020C>T synonymous_variant 0.28
gyrA 8324 c.1023T>C synonymous_variant 0.27
gyrA 8339 c.1038A>G synonymous_variant 0.24
gyrA 8340 p.Ala347Ser missense_variant 0.24
gyrA 8375 c.1074G>C synonymous_variant 0.24
gyrA 8382 p.Leu361Met missense_variant 0.2
gyrA 8391 p.Tyr364His missense_variant 0.15
gyrA 8401 p.Asp367Ala missense_variant 0.16
gyrA 8442 c.1141C>T synonymous_variant 0.18
gyrA 8452 p.Ala384Val missense_variant 0.8
gyrA 8456 c.1155C>T synonymous_variant 0.18
gyrA 8462 c.1161A>G synonymous_variant 0.18
gyrA 8471 c.1170T>C synonymous_variant 0.17
gyrA 8477 c.1176C>T synonymous_variant 0.2
gyrA 8486 c.1185T>G synonymous_variant 0.19
gyrA 8501 c.1200G>A synonymous_variant 0.16
gyrA 8520 c.1219C>T synonymous_variant 0.15
gyrA 8528 c.1227G>C synonymous_variant 0.15
gyrA 8535 p.Glu412Gln missense_variant 0.15
gyrA 8540 c.1239C>G synonymous_variant 0.16
gyrA 8555 c.1254G>C synonymous_variant 0.17
gyrA 8561 c.1260A>C synonymous_variant 0.19
gyrA 8897 c.1596T>C synonymous_variant 0.27
gyrA 8903 c.1602T>C synonymous_variant 0.27
gyrA 8915 c.1614A>G synonymous_variant 0.29
gyrA 8939 c.1638T>C synonymous_variant 0.29
gyrA 8942 c.1641G>A synonymous_variant 0.29
gyrA 8946 c.1645T>C synonymous_variant 0.23
gyrA 8952 p.Gln551Ala missense_variant 0.21
gyrA 8967 p.Ala556Asn missense_variant 0.27
gyrA 8981 c.1680G>C synonymous_variant 0.24
gyrA 8996 c.1695T>C synonymous_variant 0.24
gyrA 8998 p.Leu566Trp missense_variant 0.24
gyrA 9017 c.1716C>G synonymous_variant 0.2
gyrA 9023 c.1722A>C synonymous_variant 0.17
gyrA 9029 c.1728T>G synonymous_variant 0.16
gyrA 9032 c.1731T>C synonymous_variant 0.16
gyrA 9038 c.1737C>G synonymous_variant 0.16
gyrA 9143 c.1842T>C synonymous_variant 1.0
gyrA 9176 c.1875G>C synonymous_variant 0.16
gyrA 9182 c.1881T>C synonymous_variant 0.15
gyrA 9191 c.1890G>T synonymous_variant 0.15
gyrA 9224 c.1923C>T synonymous_variant 0.18
gyrA 9230 c.1929T>C synonymous_variant 0.19
gyrA 9236 c.1935G>C synonymous_variant 0.18
gyrA 9242 c.1941A>C synonymous_variant 0.18
gyrA 9260 c.1959G>C synonymous_variant 0.76
gyrA 9266 p.Asp655Glu missense_variant 0.26
gyrA 9267 p.Asn656Gly missense_variant 0.26
gyrA 9275 c.1974G>A synonymous_variant 0.25
gyrA 9284 c.1983T>C synonymous_variant 0.26
gyrA 9296 c.1995T>C synonymous_variant 0.24
gyrA 9304 p.Gly668Asp missense_variant 1.0
gyrA 9308 c.2007C>T synonymous_variant 0.24
gyrA 9323 c.2022C>G synonymous_variant 0.21
gyrA 9324 c.2023_2025delTCGinsAGC synonymous_variant 0.21
gyrA 9335 c.2034G>C synonymous_variant 0.21
gyrA 9341 c.2040C>G synonymous_variant 0.24
gyrA 9345 c.2044A>C synonymous_variant 0.24
gyrA 9353 c.2052G>C synonymous_variant 0.25
gyrA 9356 c.2055G>A synonymous_variant 0.24
gyrA 9377 c.2076A>G synonymous_variant 0.2
fgd1 491742 c.960T>C synonymous_variant 1.0
mshA 575680 c.333C>T synonymous_variant 0.19
mshA 575689 c.342G>C synonymous_variant 0.19
mshA 575695 c.348C>G synonymous_variant 0.27
mshA 575704 c.357T>C synonymous_variant 0.3
mshA 575705 c.358T>C synonymous_variant 0.29
mshA 575728 c.381C>A synonymous_variant 0.39
mshA 575734 c.387T>G synonymous_variant 0.38
mshA 575737 c.390T>C synonymous_variant 0.35
mshA 575744 p.Ala133Thr missense_variant 0.38
mshA 575749 c.402C>G synonymous_variant 0.36
mshA 575756 c.409C>T synonymous_variant 0.36
mshA 575771 p.Val142Thr missense_variant 0.28
mshA 575779 c.432A>G synonymous_variant 0.28
mshA 575782 c.435G>C synonymous_variant 0.26
mshA 575785 c.438T>C synonymous_variant 0.27
mshA 575788 c.441C>T synonymous_variant 0.29
mshA 575795 p.Ile150Val missense_variant 0.35
mshA 575800 c.453G>C synonymous_variant 0.34
mshA 575821 c.474G>C synonymous_variant 0.29
mshA 575842 c.495G>C synonymous_variant 0.31
mshA 575845 c.498C>G synonymous_variant 0.31
mshA 575848 c.501C>T synonymous_variant 0.29
mshA 575864 c.517_519delTTGinsCTC synonymous_variant 0.22
mshA 575878 c.531A>G synonymous_variant 0.22
mshA 575884 c.537G>C synonymous_variant 0.22
ccsA 620358 c.468C>G synonymous_variant 0.19
ccsA 620362 p.Ala158Ser missense_variant 0.18
ccsA 620367 c.477T>C synonymous_variant 0.2
ccsA 620373 c.483C>G synonymous_variant 0.19
ccsA 620376 c.486G>C synonymous_variant 0.19
ccsA 620385 c.495G>C synonymous_variant 0.21
ccsA 620388 c.498A>G synonymous_variant 0.22
ccsA 620412 c.522T>C synonymous_variant 0.18
ccsA 620415 c.525T>C synonymous_variant 0.18
ccsA 620421 c.531G>C synonymous_variant 0.19
ccsA 620427 c.537C>G synonymous_variant 0.19
ccsA 620436 c.546T>C synonymous_variant 0.19
ccsA 620439 c.549T>C synonymous_variant 0.19
ccsA 620721 c.831G>C synonymous_variant 0.2
ccsA 620724 c.834C>T synonymous_variant 0.19
ccsA 620730 c.840C>T synonymous_variant 0.21
ccsA 620736 c.846G>C synonymous_variant 0.21
ccsA 620739 c.849A>G synonymous_variant 0.21
ccsA 620742 c.852G>A synonymous_variant 0.21
ccsA 620764 p.Ala292Ser missense_variant 0.27
rpoB 759620 c.-187A>C upstream_gene_variant 0.32
rpoB 760130 p.Asp108Glu missense_variant 0.19
rpoB 760139 c.333A>G synonymous_variant 0.19
rpoB 760142 c.336C>G synonymous_variant 0.21
rpoB 760151 c.345G>A synonymous_variant 0.22
rpoB 760184 c.378A>G synonymous_variant 0.45
rpoB 760196 c.390C>G synonymous_variant 0.49
rpoB 760235 c.429T>C synonymous_variant 0.45
rpoB 760244 c.438G>C synonymous_variant 0.47
rpoB 760283 c.477G>C synonymous_variant 0.44
rpoB 760298 c.492G>C synonymous_variant 0.35
rpoB 760310 c.504G>C synonymous_variant 0.39
rpoB 760316 c.510C>G synonymous_variant 0.4
rpoB 760325 c.519G>C synonymous_variant 0.39
rpoB 760331 c.525G>C synonymous_variant 0.38
rpoB 760334 c.528G>T synonymous_variant 0.37
rpoB 760340 c.534G>T synonymous_variant 0.36
rpoB 760357 p.Thr184Ser missense_variant 0.28
rpoB 760361 c.555T>C synonymous_variant 0.32
rpoB 760370 c.564C>G synonymous_variant 0.28
rpoB 760376 p.Asp190Glu missense_variant 0.29
rpoB 760407 p.Ser201Gly missense_variant 0.29
rpoB 760415 c.609C>T synonymous_variant 0.31
rpoB 760424 c.618C>G synonymous_variant 0.27
rpoB 760430 c.624T>C synonymous_variant 0.26
rpoB 760457 c.651C>T synonymous_variant 0.23
rpoB 760460 c.654G>C synonymous_variant 0.25
rpoB 760475 c.669A>G synonymous_variant 0.24
rpoB 760478 c.672C>T synonymous_variant 0.21
rpoB 760481 c.675G>T synonymous_variant 0.21
rpoB 760484 c.678A>G synonymous_variant 0.2
rpoB 760502 c.696C>G synonymous_variant 0.24
rpoB 760532 c.726T>C synonymous_variant 0.19
rpoB 760533 p.Val243Thr missense_variant 0.19
rpoB 760541 c.735G>C synonymous_variant 0.18
rpoB 760547 c.741G>C synonymous_variant 0.17
rpoB 760585 p.Asn260Ser missense_variant 0.16
rpoB 760591 p.Val262Ala missense_variant 0.17
rpoB 760596 p.Thr264Pro missense_variant 0.2
rpoB 760611 c.805T>C synonymous_variant 0.19
rpoB 760625 c.819C>G synonymous_variant 0.19
rpoB 760646 c.840C>G synonymous_variant 0.21
rpoB 760655 c.849A>G synonymous_variant 0.29
rpoB 760661 c.855A>C synonymous_variant 0.29
rpoB 760670 c.864G>C synonymous_variant 0.35
rpoB 760674 c.868T>C synonymous_variant 0.37
rpoB 760679 c.873A>G synonymous_variant 0.37
rpoB 760683 c.877T>C synonymous_variant 0.43
rpoB 760724 c.918T>C synonymous_variant 0.41
rpoB 760730 c.924T>C synonymous_variant 0.38
rpoB 760748 c.942C>G synonymous_variant 0.34
rpoB 760751 c.945G>C synonymous_variant 0.34
rpoB 760755 p.His317Asn missense_variant 0.35
rpoB 760759 p.Val318Ala missense_variant 0.36
rpoB 760764 p.Glu320Gln missense_variant 0.38
rpoB 760769 c.963C>G synonymous_variant 0.32
rpoB 760784 c.978G>C synonymous_variant 0.32
rpoB 760793 c.987A>G synonymous_variant 0.32
rpoB 760805 c.999G>C synonymous_variant 0.24
rpoB 760817 c.1011A>G synonymous_variant 0.19
rpoB 760820 c.1014T>C synonymous_variant 0.19
rpoB 760826 c.1020C>G synonymous_variant 0.18
rpoB 760829 c.1023C>T synonymous_variant 0.16
rpoB 760830 c.1024T>C synonymous_variant 0.16
rpoB 760841 c.1035T>C synonymous_variant 0.17
rpoB 760916 c.1110C>T synonymous_variant 0.19
rpoB 760919 c.1113C>T synonymous_variant 0.19
rpoB 760925 c.1119T>C synonymous_variant 0.21
rpoB 760928 c.1122G>C synonymous_variant 0.19
rpoB 760934 c.1128C>T synonymous_variant 0.17
rpoB 760946 c.1140A>G synonymous_variant 0.17
rpoB 760965 p.Met387Leu missense_variant 0.19
rpoB 760973 c.1167G>T synonymous_variant 0.21
rpoB 760982 c.1176G>T synonymous_variant 0.2
rpoB 760985 c.1179G>C synonymous_variant 0.21
rpoB 760988 c.1182C>G synonymous_variant 0.23
rpoB 760991 c.1185G>T synonymous_variant 0.26
rpoB 760997 c.1191G>C synonymous_variant 0.32
rpoB 761015 c.1209G>C synonymous_variant 0.32
rpoB 761027 c.1221A>C synonymous_variant 0.38
rpoB 761036 c.1230G>C synonymous_variant 0.36
rpoB 761037 c.1231T>C synonymous_variant 0.36
rpoB 761051 c.1245G>C synonymous_variant 0.32
rpoB 761054 c.1248G>C synonymous_variant 0.32
rpoB 761057 c.1251G>C synonymous_variant 0.32
rpoB 761060 c.1254C>G synonymous_variant 0.32
rpoB 761063 c.1257C>G synonymous_variant 0.32
rpoB 761097 c.1291_1293delAGCinsTCG synonymous_variant 0.26
rpoB 761102 c.1296A>G synonymous_variant 0.26
rpoB 761132 c.1326G>T synonymous_variant 0.16
rpoB 761133 c.1327T>C synonymous_variant 0.17
rpoB 761147 c.1341C>T synonymous_variant 0.18
rpoB 761150 c.1344A>T synonymous_variant 0.21
rpoB 761165 c.1359G>C synonymous_variant 0.25
rpoB 761198 c.1392G>T synonymous_variant 0.14
rpoB 761261 c.1455G>T synonymous_variant 0.15
rpoB 761264 c.1458C>G synonymous_variant 0.16
rpoB 761300 c.1494G>C synonymous_variant 0.27
rpoB 761318 c.1512G>C synonymous_variant 0.19
rpoB 761327 c.1521A>G synonymous_variant 0.2
rpoB 761333 c.1527G>T synonymous_variant 0.2
rpoB 761345 c.1539G>T synonymous_variant 0.2
rpoB 761354 c.1548C>T synonymous_variant 0.21
rpoB 761360 c.1554T>C synonymous_variant 0.2
rpoB 761367 p.Glu521Gln missense_variant 0.23
rpoB 761374 p.Val523Asp missense_variant 0.26
rpoB 761408 c.1602G>C synonymous_variant 0.28
rpoB 761414 c.1608A>G synonymous_variant 0.21
rpoB 761423 c.1617T>C synonymous_variant 0.2
rpoB 761516 c.1710G>C synonymous_variant 0.18
rpoB 761534 c.1728G>A synonymous_variant 0.26
rpoB 761537 c.1731C>G synonymous_variant 0.35
rpoB 761552 c.1746G>T synonymous_variant 0.24
rpoB 761555 c.1749G>C synonymous_variant 0.24
rpoB 761558 c.1752C>G synonymous_variant 0.25
rpoB 761570 c.1764T>C synonymous_variant 0.3
rpoB 761573 c.1767C>G synonymous_variant 0.3
rpoB 761579 c.1773G>C synonymous_variant 0.3
rpoB 761606 c.1800C>G synonymous_variant 0.26
rpoB 761612 c.1806G>T synonymous_variant 0.26
rpoB 761615 c.1809A>C synonymous_variant 0.26
rpoB 761633 c.1827G>A synonymous_variant 0.26
rpoB 761636 c.1830G>T synonymous_variant 0.29
rpoB 761645 c.1839C>A synonymous_variant 0.18
rpoB 761648 c.1842T>C synonymous_variant 0.17
rpoB 761666 c.1860G>C synonymous_variant 0.2
rpoB 761669 c.1863C>T synonymous_variant 0.18
rpoB 761675 c.1869G>T synonymous_variant 0.23
rpoB 761690 c.1884G>C synonymous_variant 0.22
rpoB 761705 c.1899C>T synonymous_variant 0.19
rpoB 761712 p.Val636Ile missense_variant 0.19
rpoB 761727 p.Ser641Gly missense_variant 0.15
rpoB 761772 p.His656Ala missense_variant 0.15
rpoB 761784 p.Thr660Ser missense_variant 0.15
rpoB 761792 c.1986T>C synonymous_variant 0.15
rpoB 761885 c.2079T>C synonymous_variant 0.2
rpoB 761891 c.2085G>C synonymous_variant 0.21
rpoB 761892 p.Ile696Val missense_variant 0.21
rpoB 761948 c.2142G>C synonymous_variant 0.16
rpoB 761954 c.2148C>G synonymous_variant 0.17
rpoB 761999 c.2193G>C synonymous_variant 0.25
rpoB 762002 c.2196C>G synonymous_variant 0.26
rpoB 762038 c.2232C>T synonymous_variant 0.26
rpoB 762047 c.2241G>A synonymous_variant 0.28
rpoB 762053 c.2247T>C synonymous_variant 0.26
rpoB 762065 c.2259T>C synonymous_variant 0.3
rpoB 762083 c.2277T>C synonymous_variant 0.35
rpoB 762086 c.2280G>C synonymous_variant 0.34
rpoB 762101 c.2295C>G synonymous_variant 0.38
rpoB 762114 p.Ile770Val missense_variant 0.37
rpoB 762122 c.2316C>T synonymous_variant 0.4
rpoB 762131 c.2325C>G synonymous_variant 0.45
rpoB 762137 c.2331C>T synonymous_variant 0.38
rpoB 762140 c.2334G>C synonymous_variant 0.38
rpoB 762143 c.2337T>C synonymous_variant 0.38
rpoB 762149 c.2343G>C synonymous_variant 0.41
rpoB 762158 c.2352G>C synonymous_variant 0.47
rpoB 762167 c.2361T>C synonymous_variant 0.44
rpoB 762176 c.2370T>C synonymous_variant 0.49
rpoB 762185 c.2379G>C synonymous_variant 0.49
rpoB 762233 c.2427G>C synonymous_variant 0.37
rpoB 762239 c.2433G>A synonymous_variant 0.35
rpoB 762245 c.2439G>C synonymous_variant 0.35
rpoB 762284 c.2478G>T synonymous_variant 0.26
rpoB 762293 c.2487T>G synonymous_variant 0.28
rpoB 762308 c.2502G>C synonymous_variant 0.22
rpoB 762314 c.2508C>T synonymous_variant 0.21
rpoB 762317 c.2511A>G synonymous_variant 0.2
rpoB 762329 c.2523G>C synonymous_variant 0.2
rpoB 762338 c.2532T>C synonymous_variant 0.22
rpoB 762341 c.2535G>C synonymous_variant 0.22
rpoB 762347 c.2541T>C synonymous_variant 0.21
rpoB 762353 c.2547C>T synonymous_variant 0.17
rpoC 762443 c.-927G>C upstream_gene_variant 0.16
rpoC 762449 c.-921C>A upstream_gene_variant 0.18
rpoC 762452 c.-918G>C upstream_gene_variant 0.17
rpoC 762470 c.-900G>C upstream_gene_variant 0.19
rpoC 762488 c.-882G>C upstream_gene_variant 0.16
rpoC 762491 c.-879T>C upstream_gene_variant 0.16
rpoB 762507 p.Leu901Met missense_variant 0.19
rpoB 762510 p.Ala902Pro missense_variant 0.17
rpoC 762515 c.-855C>T upstream_gene_variant 0.17
rpoC 762533 c.-837T>C upstream_gene_variant 0.18
rpoC 762536 c.-834T>C upstream_gene_variant 0.18
rpoC 762537 c.-833T>C upstream_gene_variant 0.18
rpoC 762551 c.-819C>T upstream_gene_variant 0.19
rpoC 762812 c.-558C>G upstream_gene_variant 0.17
rpoB 762814 p.Met1003Thr missense_variant 0.17
rpoC 762816 c.-554_-552delCTCinsTTG upstream_gene_variant 0.16
rpoC 762827 c.-543G>C upstream_gene_variant 0.2
rpoC 762833 c.-537C>T upstream_gene_variant 0.23
rpoC 762836 c.-534C>T upstream_gene_variant 0.25
rpoC 762839 c.-531G>A upstream_gene_variant 0.25
rpoC 762857 c.-513C>G upstream_gene_variant 0.26
rpoC 762863 c.-507T>C upstream_gene_variant 0.24
rpoB 762879 p.Met1025Leu missense_variant 0.33
rpoC 762911 c.-459C>T upstream_gene_variant 0.37
rpoC 762920 c.-450C>T upstream_gene_variant 0.4
rpoC 762929 c.-441G>C upstream_gene_variant 0.42
rpoC 762959 c.-411G>C upstream_gene_variant 0.32
rpoC 762962 c.-408C>T upstream_gene_variant 0.33
rpoC 762983 c.-387C>T upstream_gene_variant 0.39
rpoC 762989 c.-381G>A upstream_gene_variant 0.37
rpoC 762995 c.-375G>T upstream_gene_variant 0.38
rpoC 763004 c.-366G>A upstream_gene_variant 0.37
rpoC 763007 c.-363C>T upstream_gene_variant 0.38
rpoC 763022 c.-348C>G upstream_gene_variant 0.44
rpoC 763028 c.-342T>C upstream_gene_variant 0.42
rpoC 763031 c.-339T>C upstream_gene_variant 0.56
rpoC 763053 c.-317T>C upstream_gene_variant 0.35
rpoC 763070 c.-300T>C upstream_gene_variant 0.42
rpoC 763076 c.-294C>G upstream_gene_variant 0.4
rpoC 763088 c.-282C>G upstream_gene_variant 0.43
rpoC 763103 c.-267G>C upstream_gene_variant 0.43
rpoC 763115 c.-255T>C upstream_gene_variant 0.42
rpoC 763127 c.-243G>T upstream_gene_variant 0.39
rpoC 763130 c.-240G>A upstream_gene_variant 0.37
rpoC 763133 c.-237G>C upstream_gene_variant 0.38
rpoC 763136 c.-234C>T upstream_gene_variant 0.38
rpoC 763160 c.-210G>T upstream_gene_variant 0.33
rpoC 763166 c.-204A>G upstream_gene_variant 0.3
rpoC 763169 c.-201A>G upstream_gene_variant 0.28
rpoC 763193 c.-177C>T upstream_gene_variant 0.2
rpoC 763202 c.-168A>C upstream_gene_variant 0.17
rpoC 763205 c.-165G>C upstream_gene_variant 0.17
rpoC 763408 c.39T>C synonymous_variant 0.16
rpoC 763411 c.42T>C synonymous_variant 0.16
rpoC 763414 c.45T>C synonymous_variant 0.16
rpoC 763423 p.Glu18Asp missense_variant 0.17
rpoC 763430 c.61_63delAGGinsCGT synonymous_variant 0.17
rpoC 763433 p.Gln22Asn missense_variant 0.17
rpoC 763443 p.Tyr25Phe missense_variant 0.16
rpoC 763456 c.87A>G synonymous_variant 0.17
rpoC 763465 c.96G>A synonymous_variant 0.19
rpoC 763468 c.99G>C synonymous_variant 0.15
rpoC 763486 c.117T>G synonymous_variant 0.15
rpoC 763594 c.225C>T synonymous_variant 0.15
rpoC 763621 c.252C>G synonymous_variant 0.25
rpoC 763660 c.291T>G synonymous_variant 0.23
rpoC 763666 c.297G>A synonymous_variant 0.21
rpoC 763675 c.306C>G synonymous_variant 0.2
rpoC 763699 c.330G>T synonymous_variant 0.16
rpoC 763702 c.333C>G synonymous_variant 0.15
rpoC 763705 c.336G>C synonymous_variant 0.15
rpoC 763709 c.340C>T synonymous_variant 0.15
rpoC 763714 c.345G>C synonymous_variant 0.16
rpoC 763717 c.348T>C synonymous_variant 0.16
rpoC 763723 c.354G>C synonymous_variant 0.16
rpoC 763741 c.372C>T synonymous_variant 0.14
rpoC 763747 c.378G>A synonymous_variant 0.15
rpoC 763765 c.396T>G synonymous_variant 0.16
rpoC 763858 c.489A>G synonymous_variant 0.24
rpoC 763861 c.492C>T synonymous_variant 0.24
rpoC 763872 p.Gly168Ala missense_variant 0.25
rpoC 763876 p.Glu169Asp missense_variant 0.27
rpoC 763879 c.510A>G synonymous_variant 0.26
rpoC 763884 p.Ala172Val missense_variant 0.7
rpoC 763886 c.517C>A synonymous_variant 0.7
rpoC 763891 c.522G>C synonymous_variant 0.28
rpoC 763894 c.525A>G synonymous_variant 0.28
rpoC 763900 c.531G>C synonymous_variant 0.29
rpoC 763921 c.552G>C synonymous_variant 0.25
rpoC 763933 c.564C>T synonymous_variant 0.3
rpoC 763940 p.Ala191Ser missense_variant 0.25
rpoC 763945 c.576T>C synonymous_variant 0.24
rpoC 763947 p.Ala193Val missense_variant 0.26
rpoC 763951 c.582G>C synonymous_variant 0.27
rpoC 763960 c.591T>G synonymous_variant 0.26
rpoC 763978 c.609C>T synonymous_variant 0.25
rpoC 763987 c.618C>T synonymous_variant 0.14
rpoC 764153 p.Gln262Lys missense_variant 0.15
rpoC 764254 c.885G>C synonymous_variant 0.2
rpoC 764263 c.894G>C synonymous_variant 0.17
rpoC 764266 c.897T>C synonymous_variant 0.2
rpoC 764272 c.903G>C synonymous_variant 0.27
rpoC 764278 c.909A>G synonymous_variant 0.33
rpoC 764293 c.924G>C synonymous_variant 0.33
rpoC 764297 p.Met310Leu missense_variant 0.34
rpoC 764344 c.975C>T synonymous_variant 0.29
rpoC 764353 c.984G>T synonymous_variant 0.29
rpoC 764365 c.996C>T synonymous_variant 0.25
rpoC 764371 c.1002G>C synonymous_variant 0.21
rpoC 764374 c.1005C>T synonymous_variant 0.21
rpoC 764380 c.1011G>C synonymous_variant 0.29
rpoC 764387 c.1018T>C synonymous_variant 0.29
rpoC 764405 c.1036_1038delAGGinsCGC synonymous_variant 0.33
rpoC 764431 c.1062G>C synonymous_variant 0.34
rpoC 764434 c.1065A>G synonymous_variant 0.33
rpoC 764435 c.1066_1068delAGGinsCGA synonymous_variant 0.33
rpoC 764446 c.1077T>C synonymous_variant 0.32
rpoC 764449 c.1080G>C synonymous_variant 0.33
rpoC 764455 c.1086G>T synonymous_variant 0.33
rpoC 764458 c.1089G>C synonymous_variant 0.32
rpoC 764461 c.1092A>G synonymous_variant 0.31
rpoC 764485 c.1116G>C synonymous_variant 0.33
rpoC 764491 c.1122G>T synonymous_variant 0.33
rpoC 764497 c.1128A>G synonymous_variant 0.33
rpoC 764500 c.1131C>G synonymous_variant 0.3
rpoC 764521 c.1152T>C synonymous_variant 0.25
rpoC 764527 c.1158C>T synonymous_variant 0.22
rpoC 764530 c.1161C>T synonymous_variant 0.17
rpoC 764536 c.1167G>T synonymous_variant 0.18
rpoC 764539 c.1170C>G synonymous_variant 0.18
rpoC 764560 c.1191T>C synonymous_variant 0.15
rpoC 764575 c.1206T>G synonymous_variant 0.2
rpoC 764605 c.1236G>C synonymous_variant 0.29
rpoC 764611 c.1242G>T synonymous_variant 0.31
rpoC 764623 c.1254C>G synonymous_variant 0.33
rpoC 764626 c.1257C>T synonymous_variant 0.34
rpoC 764632 c.1263T>C synonymous_variant 0.33
rpoC 764650 c.1281G>T synonymous_variant 0.36
rpoC 764692 c.1323C>T synonymous_variant 0.34
rpoC 764701 c.1332C>G synonymous_variant 0.32
rpoC 764713 c.1344G>T synonymous_variant 0.34
rpoC 764719 c.1350G>A synonymous_variant 0.33
rpoC 764746 c.1377G>T synonymous_variant 0.34
rpoC 764752 c.1383G>C synonymous_variant 0.32
rpoC 764758 c.1389C>G synonymous_variant 0.31
rpoC 764764 c.1395T>C synonymous_variant 0.33
rpoC 764803 c.1434C>T synonymous_variant 0.4
rpoC 764809 c.1440C>T synonymous_variant 0.42
rpoC 764815 c.1446A>G synonymous_variant 0.41
rpoC 764827 c.1458G>C synonymous_variant 0.43
rpoC 764851 c.1482C>T synonymous_variant 0.38
rpoC 764858 c.1489T>C synonymous_variant 0.41
rpoC 764869 c.1500C>T synonymous_variant 0.29
rpoC 764875 c.1506C>T synonymous_variant 0.26
rpoC 764878 c.1509C>G synonymous_variant 0.28
rpoC 764887 c.1518G>C synonymous_variant 0.26
rpoC 764888 c.1519T>C synonymous_variant 0.26
rpoC 764911 c.1542A>G synonymous_variant 0.25
rpoC 764912 p.Met515Gln missense_variant 0.25
rpoC 764935 c.1566T>C synonymous_variant 0.19
rpoC 764968 c.1599T>C synonymous_variant 0.15
rpoC 765383 p.Met672Leu missense_variant 0.16
rpoC 765403 c.2034G>C synonymous_variant 0.18
rpoC 765404 p.Leu679Lys missense_variant 0.18
rpoC 765409 c.2040T>C synonymous_variant 0.18
rpoC 765412 c.2043T>C synonymous_variant 0.17
rpoC 765425 p.Lys686Glu missense_variant 0.2
rpoC 765445 c.2076G>C synonymous_variant 0.25
rpoC 765452 p.Ala695Arg missense_variant 0.25
rpoC 765466 c.2097C>T synonymous_variant 0.29
rpoC 765478 c.2109T>C synonymous_variant 0.31
rpoC 765480 p.Tyr704Phe missense_variant 0.31
rpoC 765496 c.2127C>G synonymous_variant 0.29
rpoC 765499 c.2130C>G synonymous_variant 0.28
rpoC 765532 c.2163C>T synonymous_variant 0.26
rpoC 765533 p.Tyr722His missense_variant 0.26
rpoC 765547 c.2178C>T synonymous_variant 0.16
rpoC 765548 c.2179_2181delAGCinsTCG synonymous_variant 0.16
rpoC 765553 c.2184C>T synonymous_variant 0.16
rpoC 765556 c.2187G>C synonymous_variant 0.16
rpoC 765562 c.2193G>C synonymous_variant 0.17
rpoC 765577 c.2208G>T synonymous_variant 0.2
rpoC 765728 p.Gln787Lys missense_variant 0.17
rpoC 765734 p.Leu789Met missense_variant 0.15
rpoC 765737 p.Arg790Glu missense_variant 0.15
rpoC 765743 p.His792Tyr missense_variant 0.21
rpoC 765751 c.2382C>G synonymous_variant 0.2
rpoC 765753 p.Asp795Ala missense_variant 0.2
rpoC 765772 c.2403C>G synonymous_variant 0.24
rpoC 765778 c.2409C>G synonymous_variant 0.23
rpoC 765779 p.Asp804Lys missense_variant 0.23
rpoC 765784 c.2415C>G synonymous_variant 0.25
rpoC 765793 c.2424C>G synonymous_variant 0.25
rpoC 765796 c.2427C>T synonymous_variant 0.27
rpoC 765800 p.Phe811Leu missense_variant 0.3
rpoC 765814 c.2445A>C synonymous_variant 0.3
rpoC 765817 c.2448G>C synonymous_variant 0.3
rpoC 765826 c.2457T>C synonymous_variant 0.3
rpoC 765835 c.2466C>T synonymous_variant 0.33
rpoC 765868 c.2499G>T synonymous_variant 0.3
rpoC 765871 c.2502T>C synonymous_variant 0.3
rpoC 765875 p.Val836Ile missense_variant 0.29
rpoC 765886 c.2517C>G synonymous_variant 0.26
rpoC 765892 c.2523T>C synonymous_variant 0.23
rpoC 765895 c.2526G>A synonymous_variant 0.23
rpoC 765899 c.2530C>T synonymous_variant 0.22
rpoC 765904 c.2535C>G synonymous_variant 0.25
rpoC 765908 c.2539C>T synonymous_variant 0.23
rpoC 765934 c.2565C>T synonymous_variant 0.16
rpoC 765937 c.2568T>C synonymous_variant 0.16
rpoC 765940 c.2571A>T synonymous_variant 0.17
rpoC 765946 c.2577C>T synonymous_variant 0.16
rpoC 765947 c.2578T>C synonymous_variant 0.16
rpoC 765952 c.2583G>C synonymous_variant 0.18
rpoC 765961 c.2592G>T synonymous_variant 0.18
rpoC 765962 c.2593T>C synonymous_variant 0.18
rpoC 765967 c.2598C>T synonymous_variant 0.18
rpoC 765979 c.2610C>G synonymous_variant 0.17
rpoC 765982 c.2613C>T synonymous_variant 0.17
rpoC 765994 c.2625A>T synonymous_variant 0.14
rpoC 766594 c.3225G>T synonymous_variant 0.12
rpoC 766618 c.3249G>T synonymous_variant 0.29
rpoC 766630 c.3261G>T synonymous_variant 0.27
rpoC 766634 p.Phe1089Leu missense_variant 0.26
rpoC 766638 p.Lys1090Thr missense_variant 0.26
rpoC 766645 c.3276A>G synonymous_variant 0.26
rpoC 766651 c.3282T>C synonymous_variant 0.27
rpoC 766658 p.Arg1097Gly missense_variant 0.27
rpoC 766666 c.3297C>G synonymous_variant 0.23
rpoC 766672 c.3303T>C synonymous_variant 0.24
rpoC 766675 c.3306C>T synonymous_variant 0.26
rpoC 766690 c.3321G>C synonymous_variant 0.25
rpoC 766694 p.Gln1109Asp missense_variant 0.25
rpoC 766714 c.3345G>C synonymous_variant 0.31
rpoC 766717 c.3348C>G synonymous_variant 0.31
rpoC 766720 c.3351C>T synonymous_variant 0.33
rpoC 766726 c.3357T>C synonymous_variant 0.33
rpoC 766738 c.3369G>C synonymous_variant 0.28
rpoC 766741 c.3372G>C synonymous_variant 0.29
rpoC 766765 c.3396A>C synonymous_variant 0.27
rpoC 766771 c.3402G>C synonymous_variant 0.27
rpoC 766774 c.3405T>C synonymous_variant 0.27
rpoC 766775 p.Arg1136Lys missense_variant 0.28
rpoC 766798 c.3429C>G synonymous_variant 0.32
rpoC 766801 c.3432C>T synonymous_variant 0.34
rpoC 766804 c.3435A>G synonymous_variant 0.3
rpoC 766837 c.3468G>C synonymous_variant 0.21
rpoC 766846 c.3477C>G synonymous_variant 0.15
rpoC 766978 c.3609C>A synonymous_variant 0.16
rpoC 766996 c.3627C>T synonymous_variant 0.24
rpoC 767002 c.3633G>C synonymous_variant 0.25
rpoC 767008 c.3639G>A synonymous_variant 0.25
rpoC 767020 c.3651C>G synonymous_variant 0.29
rpoC 767023 c.3654C>T synonymous_variant 0.3
rpoC 767068 c.3699G>T synonymous_variant 0.3
rpoC 767098 c.3729T>C synonymous_variant 0.37
rpoC 767104 c.3735C>G synonymous_variant 0.3
rpoC 767105 p.Asn1246Gln missense_variant 0.3
rpoC 767119 c.3750A>G synonymous_variant 0.32
rpoC 767134 c.3765C>T synonymous_variant 0.26
rpoC 767138 c.3769C>T synonymous_variant 0.25
rpoC 767162 p.Asn1265Ala missense_variant 0.31
rpoC 767167 c.3798C>T synonymous_variant 0.29
rpoC 767174 p.Asn1269Asp missense_variant 0.25
rpoC 767180 p.Ala1271Gln missense_variant 0.25
rpoC 767191 c.3822C>G synonymous_variant 0.28
rpoC 767197 c.3828G>A synonymous_variant 0.27
rpoC 767221 c.3852C>G synonymous_variant 0.22
rpoC 767230 c.3861G>C synonymous_variant 0.18
rpoC 767233 c.3864T>C synonymous_variant 0.19
mmpL5 775639 p.Ile948Val missense_variant 1.0
mmpL5 775746 p.Met912Thr missense_variant 1.0
mmpL5 775826 c.2655G>C synonymous_variant 0.16
mmpL5 775856 c.2625T>C synonymous_variant 0.23
mmpL5 775862 c.2619G>C synonymous_variant 0.24
mmpL5 775865 c.2616T>G synonymous_variant 0.2
mmpL5 775886 c.2595A>G synonymous_variant 0.19
mmpL5 775893 p.His863Gly missense_variant 0.21
mmpL5 775898 c.2583G>A synonymous_variant 0.16
mmpL5 775904 c.2577G>A synonymous_variant 0.26
mmpL5 775907 p.Leu858Met missense_variant 0.2
mmpL5 775915 p.Ala856Ser missense_variant 0.24
mmpL5 775916 c.2565T>G synonymous_variant 0.23
mmpL5 775951 c.2530C>T synonymous_variant 0.24
mmpL5 775981 p.Leu834Met missense_variant 0.15
mmpL5 775991 c.2490G>A synonymous_variant 0.15
mmpL5 775994 p.Ile829Leu missense_variant 0.16
mmpL5 775997 c.2484T>C synonymous_variant 0.16
mmpL5 776000 p.Leu827Ile missense_variant 0.15
mmpL5 776003 p.Ile826Leu missense_variant 0.15
mmpL5 776009 c.2472A>G synonymous_variant 0.19
mmpL5 776018 c.2463G>C synonymous_variant 0.31
mmpL5 776030 c.2451G>T synonymous_variant 0.33
mmpL5 776039 c.2442C>A synonymous_variant 0.3
mmpL5 776053 c.2428T>C synonymous_variant 0.37
mmpL5 776075 c.2406C>G synonymous_variant 0.35
mmpL5 776078 c.2403C>A synonymous_variant 0.24
mmpL5 776084 c.2397C>G synonymous_variant 0.24
mmpL5 776087 c.2394C>G synonymous_variant 0.3
mmpL5 776090 c.2391C>T synonymous_variant 0.2
mmpL5 776096 c.2385C>G synonymous_variant 0.34
mmpL5 776100 p.Thr794Leu missense_variant 1.0
mmpL5 776107 c.2374C>T synonymous_variant 0.17
mmpL5 776129 c.2352C>G synonymous_variant 0.33
mmpL5 776132 c.2349A>C synonymous_variant 0.22
mmpL5 776135 c.2346C>G synonymous_variant 0.2
mmpL5 776155 c.2326T>C synonymous_variant 0.25
rpsL 781395 c.-165T>C upstream_gene_variant 1.0
rpsL 781649 c.90T>C synonymous_variant 0.14
rpsL 781655 c.96T>C synonymous_variant 0.17
rpsL 781658 c.99A>G synonymous_variant 0.18
rpsL 781682 c.123T>C synonymous_variant 0.22
rpsL 781709 c.150G>C synonymous_variant 0.2
rpsL 781715 c.156T>C synonymous_variant 0.18
rpsL 781718 c.159C>G synonymous_variant 0.17
rpsL 781733 c.174G>C synonymous_variant 0.15
rpsL 781737 p.Gln60Gly missense_variant 0.16
rpsL 781742 c.183C>T synonymous_variant 0.16
rpsL 781751 c.192G>C synonymous_variant 0.17
rpsL 781754 c.195G>C synonymous_variant 0.18
rpsL 781760 c.201T>C synonymous_variant 0.18
rpsL 781766 c.207C>T synonymous_variant 0.19
rpsL 781769 c.210G>A synonymous_variant 0.18
rpsL 781814 c.255C>T synonymous_variant 0.25
rpsL 781817 c.258G>T synonymous_variant 0.23
rpsL 781829 c.270G>T synonymous_variant 0.3
rpsL 781832 c.273T>G synonymous_variant 0.28
rpsL 781838 c.279G>C synonymous_variant 0.28
rpsL 781841 c.282C>T synonymous_variant 0.26
rpsL 781859 c.300T>G synonymous_variant 0.3
rpsL 781868 c.309T>C synonymous_variant 0.34
rpsL 781871 c.312G>C synonymous_variant 0.36
rpsL 781877 c.318T>C synonymous_variant 0.39
rpsL 781892 c.333A>G synonymous_variant 0.38
rpsL 781898 c.339A>C synonymous_variant 0.36
rpsL 781901 c.342C>T synonymous_variant 0.32
rpsL 781907 c.348T>C synonymous_variant 0.3
rpsL 781916 c.357T>C synonymous_variant 0.31
rpsL 781929 p.Gly124Ser missense_variant 0.25
rplC 800654 c.-155T>C upstream_gene_variant 0.16
fbiC 1303968 c.1038G>C synonymous_variant 0.18
fbiC 1303971 c.1041T>C synonymous_variant 0.18
fbiC 1303980 c.1050G>C synonymous_variant 0.17
fbiC 1303998 c.1068T>C synonymous_variant 0.23
fbiC 1304001 c.1071C>G synonymous_variant 0.17
fbiC 1304004 c.1074A>G synonymous_variant 0.17
fbiC 1304008 c.1078T>C synonymous_variant 0.18
fbiC 1304013 c.1083G>C synonymous_variant 0.22
fbiC 1304019 c.1089C>T synonymous_variant 0.25
fbiC 1304022 c.1092T>C synonymous_variant 0.22
fbiC 1304046 c.1116C>G synonymous_variant 0.26
fbiC 1304049 c.1119T>A synonymous_variant 0.25
fbiC 1304058 p.Glu376Asp missense_variant 0.21
fbiC 1304064 c.1134G>C synonymous_variant 0.15
fbiC 1304066 p.Ala379Asp missense_variant 0.15
fbiC 1304490 c.1560C>G synonymous_variant 0.19
fbiC 1304499 c.1569T>G synonymous_variant 0.25
fbiC 1304511 c.1581C>G synonymous_variant 0.33
fbiC 1304520 c.1590A>C synonymous_variant 0.32
fbiC 1304523 c.1593G>A synonymous_variant 0.26
fbiC 1304526 c.1596T>G synonymous_variant 0.27
fbiC 1304533 c.1603T>C synonymous_variant 0.27
fbiC 1304538 c.1608C>T synonymous_variant 0.27
fbiC 1304559 p.Glu543Asp missense_variant 0.24
fbiC 1304562 c.1632G>C synonymous_variant 0.24
fbiC 1304567 p.Phe546Tyr missense_variant 0.23
fbiC 1304571 c.1641G>C synonymous_variant 0.22
fbiC 1304580 c.1650T>C synonymous_variant 0.24
fbiC 1304595 c.1665C>G synonymous_variant 0.28
fbiC 1304613 c.1683T>C synonymous_variant 0.17
embR 1417019 p.Cys110Tyr missense_variant 1.0
atpE 1460853 c.-192T>G upstream_gene_variant 1.0
atpE 1461197 c.153A>C synonymous_variant 0.18
atpE 1461219 c.175T>C synonymous_variant 0.18
atpE 1461224 c.180T>G synonymous_variant 0.17
rrs 1471659 n.-187C>T upstream_gene_variant 1.0
rrs 1471922 n.78delT non_coding_transcript_exon_variant 0.18
rrs 1471925 n.80T>C non_coding_transcript_exon_variant 0.19
rrs 1471931 n.87delA non_coding_transcript_exon_variant 0.19
rrs 1471934 n.89A>G non_coding_transcript_exon_variant 0.19
rrs 1471986 n.141C>T non_coding_transcript_exon_variant 0.35
rrs 1472019 n.174G>A non_coding_transcript_exon_variant 0.14
rrs 1472023 n.178G>T non_coding_transcript_exon_variant 0.15
rrs 1472028 n.183A>G non_coding_transcript_exon_variant 0.15
rrs 1472031 n.186G>C non_coding_transcript_exon_variant 0.14
rrs 1472033 n.188A>C non_coding_transcript_exon_variant 0.14
rrs 1472035 n.190G>T non_coding_transcript_exon_variant 0.14
rrs 1472042 n.197T>G non_coding_transcript_exon_variant 0.19
rrs 1472053 n.211_212delGC non_coding_transcript_exon_variant 0.2
rrs 1472061 n.216A>T non_coding_transcript_exon_variant 0.17
rrs 1472075 n.230A>G non_coding_transcript_exon_variant 0.24
rrs 1472106 n.261G>A non_coding_transcript_exon_variant 0.38
rrs 1472108 n.263C>T non_coding_transcript_exon_variant 0.38
rrs 1472150 n.305T>A non_coding_transcript_exon_variant 0.38
rrs 1472251 n.406G>A non_coding_transcript_exon_variant 0.44
rrs 1472446 n.601T>A non_coding_transcript_exon_variant 0.29
rrs 1472452 n.607G>A non_coding_transcript_exon_variant 0.29
rrs 1472464 n.619A>G non_coding_transcript_exon_variant 0.4
rrs 1472742 n.897C>T non_coding_transcript_exon_variant 0.25
rrs 1472754 n.909G>T non_coding_transcript_exon_variant 0.25
rrs 1472755 n.910G>A non_coding_transcript_exon_variant 0.25
rrs 1472879 n.1034T>A non_coding_transcript_exon_variant 0.33
rrs 1472953 n.1108G>A non_coding_transcript_exon_variant 0.58
rrs 1472957 n.1112C>T non_coding_transcript_exon_variant 0.58
rrs 1472969 n.1124A>G non_coding_transcript_exon_variant 0.62
rrs 1472978 n.1133T>C non_coding_transcript_exon_variant 0.53
rrs 1473104 n.1259C>T non_coding_transcript_exon_variant 0.46
rrs 1473110 n.1265T>G non_coding_transcript_exon_variant 0.46
rrs 1473111 n.1266A>G non_coding_transcript_exon_variant 0.48
rrs 1473276 n.1431A>G non_coding_transcript_exon_variant 0.48
rrs 1473290 n.1445C>T non_coding_transcript_exon_variant 0.45
rrs 1473291 n.1446_1447insT non_coding_transcript_exon_variant 0.46
rrs 1473301 n.1456T>C non_coding_transcript_exon_variant 0.41
rrl 1473696 n.39T>C non_coding_transcript_exon_variant 0.33
rrl 1473697 n.40C>T non_coding_transcript_exon_variant 0.43
rrl 1473699 n.42A>G non_coding_transcript_exon_variant 0.43
rrl 1473717 n.60G>T non_coding_transcript_exon_variant 0.27
rrl 1473746 n.89T>C non_coding_transcript_exon_variant 0.25
rrl 1473758 n.101G>T non_coding_transcript_exon_variant 0.3
rrl 1473770 n.113T>G non_coding_transcript_exon_variant 0.36
rrl 1473806 n.149C>T non_coding_transcript_exon_variant 0.4
rrl 1473812 n.155G>A non_coding_transcript_exon_variant 0.43
rrl 1473814 n.157A>T non_coding_transcript_exon_variant 0.43
rrl 1473815 n.158T>A non_coding_transcript_exon_variant 0.43
rrl 1473823 n.166T>C non_coding_transcript_exon_variant 0.43
rrl 1473829 n.172G>T non_coding_transcript_exon_variant 0.5
rrl 1473830 n.173T>G non_coding_transcript_exon_variant 0.43
rrl 1473832 n.175C>T non_coding_transcript_exon_variant 0.44
rrl 1473836 n.179A>G non_coding_transcript_exon_variant 0.44
rrl 1473876 n.219G>A non_coding_transcript_exon_variant 0.33
rrl 1473887 n.230T>A non_coding_transcript_exon_variant 0.4
rrl 1473888 n.231T>A non_coding_transcript_exon_variant 0.4
rrl 1473898 n.241C>T non_coding_transcript_exon_variant 0.5
rrl 1473899 n.242A>G non_coding_transcript_exon_variant 0.5
rrl 1474083 n.426C>T non_coding_transcript_exon_variant 0.67
rrl 1474135 n.478G>A non_coding_transcript_exon_variant 0.4
rrl 1474446 n.789C>T non_coding_transcript_exon_variant 0.4
rrl 1474673 n.1016T>C non_coding_transcript_exon_variant 0.33
rrl 1474676 n.1019T>A non_coding_transcript_exon_variant 0.33
rrl 1474677 n.1020A>G non_coding_transcript_exon_variant 0.33
rrl 1474753 n.1096A>G non_coding_transcript_exon_variant 0.56
rrl 1474760 n.1103A>G non_coding_transcript_exon_variant 0.62
rrl 1474794 n.1137C>T non_coding_transcript_exon_variant 0.83
rrl 1474803 n.1146G>A non_coding_transcript_exon_variant 0.8
rrl 1474812 n.1155G>A non_coding_transcript_exon_variant 0.8
rrl 1474826 n.1169T>C non_coding_transcript_exon_variant 0.29
rrl 1474830 n.1173A>G non_coding_transcript_exon_variant 0.57
rrl 1475031 n.1374G>T non_coding_transcript_exon_variant 1.0
rrl 1475061 n.1404C>A non_coding_transcript_exon_variant 1.0
rrl 1475062 n.1405A>T non_coding_transcript_exon_variant 1.0
rrl 1475120 n.1463G>T non_coding_transcript_exon_variant 0.67
rrl 1475988 n.2331A>G non_coding_transcript_exon_variant 0.36
rrl 1475991 n.2334T>C non_coding_transcript_exon_variant 0.36
rrl 1475995 n.2338G>A non_coding_transcript_exon_variant 0.36
rrl 1476088 n.2431A>C non_coding_transcript_exon_variant 1.0
rrl 1476099 n.2442A>G non_coding_transcript_exon_variant 1.0
rrl 1476103 n.2446C>G non_coding_transcript_exon_variant 1.0
rrl 1476105 n.2448G>A non_coding_transcript_exon_variant 0.5
rrl 1476106 n.2449A>T non_coding_transcript_exon_variant 0.5
rrl 1476110 n.2453G>C non_coding_transcript_exon_variant 0.5
rrl 1476115 n.2458T>C non_coding_transcript_exon_variant 0.5
rrl 1476131 n.2474C>T non_coding_transcript_exon_variant 0.5
rrl 1476160 n.2503T>C non_coding_transcript_exon_variant 0.6
rrl 1476214 n.2557G>T non_coding_transcript_exon_variant 1.0
rrl 1476215 n.2558C>T non_coding_transcript_exon_variant 1.0
rrl 1476224 n.2567A>G non_coding_transcript_exon_variant 1.0
rrl 1476251 n.2594T>G non_coding_transcript_exon_variant 1.0
rrl 1476256 n.2599A>T non_coding_transcript_exon_variant 1.0
rrl 1476260 n.2603A>G non_coding_transcript_exon_variant 1.0
rrl 1476281 n.2624T>C non_coding_transcript_exon_variant 1.0
rrl 1476297 n.2640C>T non_coding_transcript_exon_variant 1.0
rrl 1476299 n.2642C>T non_coding_transcript_exon_variant 1.0
rrl 1476529 n.2872A>G non_coding_transcript_exon_variant 0.75
rrl 1476540 n.2883C>T non_coding_transcript_exon_variant 0.78
rrl 1476583 n.2926G>A non_coding_transcript_exon_variant 0.55
rrl 1476584 n.2927C>T non_coding_transcript_exon_variant 0.5
rrl 1476594 n.2937C>T non_coding_transcript_exon_variant 0.44
rrl 1476597 n.2940G>A non_coding_transcript_exon_variant 0.5
rrl 1476603 n.2946G>A non_coding_transcript_exon_variant 0.5
rrl 1476628 n.2971T>A non_coding_transcript_exon_variant 0.47
rrl 1476664 n.3007T>C non_coding_transcript_exon_variant 0.33
rrl 1476665 n.3008T>C non_coding_transcript_exon_variant 0.33
rrl 1476674 n.3017T>C non_coding_transcript_exon_variant 0.29
rrl 1476679 n.3022T>C non_coding_transcript_exon_variant 0.29
rrl 1476689 n.3032A>T non_coding_transcript_exon_variant 0.24
rrl 1476690 n.3033C>T non_coding_transcript_exon_variant 0.2
rrl 1476693 n.3036G>A non_coding_transcript_exon_variant 0.2
rrl 1476695 n.3038T>A non_coding_transcript_exon_variant 0.2
rrl 1476716 n.3059A>C non_coding_transcript_exon_variant 0.19
rrl 1476723 n.3066T>A non_coding_transcript_exon_variant 0.14
rrl 1476725 n.3068C>T non_coding_transcript_exon_variant 0.14
rrl 1476726 n.3069A>G non_coding_transcript_exon_variant 0.16
rrl 1476731 n.3074G>A non_coding_transcript_exon_variant 0.16
rrl 1476732 n.3075T>C non_coding_transcript_exon_variant 0.15
rrl 1476746 n.3089T>C non_coding_transcript_exon_variant 0.14
rrl 1476750 n.3093T>C non_coding_transcript_exon_variant 0.14
fabG1 1673633 p.Ser65Asn missense_variant 0.15
inhA 1673652 c.-550C>G upstream_gene_variant 0.15
fabG1 1673657 p.Thr73Lys missense_variant 0.15
inhA 1673660 c.-542C>A upstream_gene_variant 0.15
inhA 1673664 c.-538A>C upstream_gene_variant 0.16
inhA 1673667 c.-535A>G upstream_gene_variant 0.17
inhA 1673769 c.-433C>T upstream_gene_variant 0.13
inhA 1673784 c.-418G>A upstream_gene_variant 0.17
inhA 1673787 c.-415G>A upstream_gene_variant 0.16
inhA 1673799 c.-403T>G upstream_gene_variant 0.19
inhA 1673802 c.-400A>G upstream_gene_variant 0.18
inhA 1673808 c.-394A>C upstream_gene_variant 0.21
inhA 1673811 c.-391G>A upstream_gene_variant 0.2
fabG1 1673829 p.Asn130Lys missense_variant 0.17
fabG1 1673830 p.Lys131Arg missense_variant 0.17
inhA 1673838 c.-364T>C upstream_gene_variant 0.17
inhA 1673841 c.-361A>C upstream_gene_variant 0.17
fabG1 1673844 p.Met135Ile missense_variant 0.17
inhA 1673847 c.-355A>C upstream_gene_variant 0.17
inhA 1673853 c.-349A>C upstream_gene_variant 0.2
fabG1 1673870 p.Ser144Met missense_variant 0.18
inhA 1673901 c.-301A>G upstream_gene_variant 0.2
fabG1 1673905 p.Ser156Ala missense_variant 0.19
inhA 1674651 c.450C>T synonymous_variant 0.15
rpsA 1833664 c.123C>A synonymous_variant 0.14
rpsA 1833679 c.138G>T synonymous_variant 0.15
rpsA 1833685 c.144G>T synonymous_variant 0.15
rpsA 1833694 c.153G>C synonymous_variant 0.16
rpsA 1833697 c.156C>G synonymous_variant 0.18
rpsA 1833709 c.168C>T synonymous_variant 0.17
rpsA 1833734 p.Ala65Ser missense_variant 0.15
rpsA 1833745 c.204G>C synonymous_variant 0.23
rpsA 1833760 c.219C>T synonymous_variant 0.24
rpsA 1833787 c.246C>G synonymous_variant 0.26
rpsA 1833790 c.249T>C synonymous_variant 0.24
rpsA 1833793 c.252C>T synonymous_variant 0.24
rpsA 1833802 c.261A>G synonymous_variant 0.23
rpsA 1833808 c.267G>C synonymous_variant 0.27
rpsA 1833811 c.270G>T synonymous_variant 0.26
rpsA 1833829 c.288A>G synonymous_variant 0.31
rpsA 1833832 c.291G>A synonymous_variant 0.33
rpsA 1833838 c.297G>C synonymous_variant 0.28
rpsA 1833841 c.300C>G synonymous_variant 0.3
rpsA 1833847 c.306C>G synonymous_variant 0.3
rpsA 1833856 c.315A>G synonymous_variant 0.3
rpsA 1833862 c.321G>T synonymous_variant 0.33
rpsA 1833894 p.Ala118Glu missense_variant 0.27
rpsA 1833928 c.387G>C synonymous_variant 0.33
rpsA 1833949 c.408T>C synonymous_variant 0.33
rpsA 1833970 c.429G>T synonymous_variant 0.42
rpsA 1833976 c.435C>T synonymous_variant 0.42
rpsA 1833979 c.438T>C synonymous_variant 0.38
rpsA 1833991 c.450C>A synonymous_variant 0.35
rpsA 1834000 c.459G>C synonymous_variant 0.35
rpsA 1834009 c.468C>T synonymous_variant 0.32
rpsA 1834012 c.471G>T synonymous_variant 0.35
rpsA 1834015 c.474G>C synonymous_variant 0.36
rpsA 1834021 c.480C>T synonymous_variant 0.28
rpsA 1834030 c.489C>G synonymous_variant 0.33
rpsA 1834067 c.526C>T synonymous_variant 0.32
rpsA 1834097 c.556_557delTCinsAG synonymous_variant 0.28
rpsA 1834102 c.561T>C synonymous_variant 0.28
rpsA 1834150 c.609G>C synonymous_variant 0.19
rpsA 1834153 c.612T>C synonymous_variant 0.18
rpsA 1834154 p.Asn205Gln missense_variant 0.19
rpsA 1834157 c.616T>C synonymous_variant 0.18
rpsA 1834162 c.621A>G synonymous_variant 0.18
rpsA 1834165 c.624A>G synonymous_variant 0.18
rpsA 1834168 c.627C>T synonymous_variant 0.18
rpsA 1834169 p.Thr210Ala missense_variant 0.2
rpsA 1834177 c.636A>C synonymous_variant 0.23
rpsA 1834213 c.672G>C synonymous_variant 0.22
rpsA 1834231 c.690T>C synonymous_variant 0.26
rpsA 1834234 c.693G>C synonymous_variant 0.23
rpsA 1834240 c.699T>C synonymous_variant 0.24
rpsA 1834249 c.708T>C synonymous_variant 0.27
rpsA 1834261 c.720A>G synonymous_variant 0.24
rpsA 1834264 c.723G>C synonymous_variant 0.24
rpsA 1834279 c.738C>T synonymous_variant 0.32
rpsA 1834297 c.756C>T synonymous_variant 0.33
rpsA 1834303 c.762T>G synonymous_variant 0.32
rpsA 1834306 c.765T>C synonymous_variant 0.33
rpsA 1834348 c.807T>C synonymous_variant 0.4
rpsA 1834361 c.820T>C synonymous_variant 0.41
rpsA 1834366 c.825A>G synonymous_variant 0.41
rpsA 1834396 c.855G>C synonymous_variant 0.44
rpsA 1834411 c.870T>C synonymous_variant 0.45
rpsA 1834423 c.882G>T synonymous_variant 0.45
rpsA 1834451 c.910T>C synonymous_variant 0.45
rpsA 1834456 c.915T>G synonymous_variant 0.44
rpsA 1834468 c.927A>G synonymous_variant 0.31
rpsA 1834489 c.948T>C synonymous_variant 0.26
rpsA 1834498 c.957C>T synonymous_variant 0.27
rpsA 1834513 c.972C>G synonymous_variant 0.29
rpsA 1834520 p.Ala327Ser missense_variant 0.29
rpsA 1834528 c.987T>C synonymous_variant 0.27
rpsA 1834540 c.999G>C synonymous_variant 0.26
rpsA 1834543 c.1002C>G synonymous_variant 0.24
rpsA 1834546 c.1005T>C synonymous_variant 0.23
rpsA 1834554 c.1014_1015delTG frameshift_variant 0.21
rpsA 1834558 c.1017_1018insAG frameshift_variant 0.21
rpsA 1834606 c.1065C>T synonymous_variant 0.25
rpsA 1834609 c.1068T>C synonymous_variant 0.25
rpsA 1834619 c.1078T>C synonymous_variant 0.23
rpsA 1834622 c.1081_1083delTCGinsAGC synonymous_variant 0.22
rpsA 1834633 c.1092A>G synonymous_variant 0.24
rpsA 1834639 c.1098T>C synonymous_variant 0.26
rpsA 1834667 p.Ala376Ser missense_variant 0.29
rpsA 1834690 c.1149T>C synonymous_variant 0.37
rpsA 1834732 c.1191T>C synonymous_variant 0.3
rpsA 1834738 c.1197A>G synonymous_variant 0.26
rpsA 1834753 c.1212T>C synonymous_variant 0.24
rpsA 1834756 c.1215G>A synonymous_variant 0.24
rpsA 1834759 c.1218A>C synonymous_variant 0.23
rpsA 1834765 p.Glu408Asp missense_variant 0.24
rpsA 1834774 c.1233C>T synonymous_variant 0.21
rpsA 1834776 p.Ala412Glu missense_variant 0.24
rpsA 1834780 c.1239A>G synonymous_variant 0.21
rpsA 1834786 c.1245A>G synonymous_variant 0.22
rpsA 1834789 c.1248T>C synonymous_variant 0.22
rpsA 1834792 c.1251G>C synonymous_variant 0.22
rpsA 1834810 c.1269C>T synonymous_variant 0.21
rpsA 1834813 c.1272G>C synonymous_variant 0.2
rpsA 1834829 p.Ala430Thr missense_variant 0.16
tlyA 1917972 c.33A>G synonymous_variant 1.0
katG 2154724 p.Arg463Leu missense_variant 1.0
katG 2155722 c.390G>C synonymous_variant 0.16
katG 2155766 p.His116Asp missense_variant 0.13
katG 2155769 p.Ile115Val missense_variant 0.17
katG 2155779 c.333C>T synonymous_variant 0.15
katG 2155782 c.330C>G synonymous_variant 0.15
PPE35 2167926 p.Leu896Ser missense_variant 1.0
PPE35 2168533 p.Val694Leu missense_variant 1.0
Rv1979c 2222308 p.Asp286Gly missense_variant 1.0
Rv1979c 2223293 c.-129A>G upstream_gene_variant 1.0
pncA 2290129 c.-888C>A upstream_gene_variant 1.0
kasA 2517941 c.-174C>G upstream_gene_variant 0.21
kasA 2517959 c.-156C>T upstream_gene_variant 0.14
kasA 2518132 c.18C>T synonymous_variant 1.0
kasA 2518606 c.492G>C synonymous_variant 0.17
kasA 2518609 p.Met165Ile missense_variant 0.17
kasA 2518624 c.510C>G synonymous_variant 0.27
kasA 2518627 c.513T>C synonymous_variant 0.27
kasA 2518639 c.525G>T synonymous_variant 0.31
kasA 2518642 c.528A>G synonymous_variant 0.31
kasA 2518645 c.531G>C synonymous_variant 0.33
kasA 2518656 p.Ala181Gly missense_variant 0.29
kasA 2518678 c.564C>T synonymous_variant 0.29
kasA 2518684 c.570C>G synonymous_variant 0.21
kasA 2518688 p.Val192Phe missense_variant 0.15
kasA 2519035 c.921C>T synonymous_variant 1.0
kasA 2519218 c.1104G>C synonymous_variant 0.17
kasA 2519224 c.1110C>G synonymous_variant 0.18
kasA 2519242 c.1128C>G synonymous_variant 0.14
ahpC 2726051 c.-142G>A upstream_gene_variant 1.0
ahpC 2726639 c.447C>G synonymous_variant 0.15
ahpC 2726669 c.477T>C synonymous_variant 0.16
ahpC 2726675 c.483A>G synonymous_variant 0.15
ahpC 2726681 c.489A>G synonymous_variant 0.18
ahpC 2726684 c.492G>T synonymous_variant 0.18
ahpC 2726693 c.501C>G synonymous_variant 0.18
ahpC 2726696 c.504C>G synonymous_variant 0.17
folC 2746251 p.Ala450Thr missense_variant 0.15
Rv2752c 3065109 c.1081_1083delAGAinsCGC synonymous_variant 0.18
Rv2752c 3065115 c.1077C>G synonymous_variant 0.18
Rv2752c 3065126 p.Ser356Ala missense_variant 0.16
Rv2752c 3065133 c.1059T>C synonymous_variant 0.17
Rv2752c 3065166 c.1026C>G synonymous_variant 0.14
thyX 3067839 p.Val36Ala missense_variant 0.17
ald 3086788 c.-32T>C upstream_gene_variant 1.0
fbiD 3339417 c.300A>G synonymous_variant 1.0
Rv3083 3448714 p.Asp71His missense_variant 1.0
Rv3083 3448835 p.Ser111Ile missense_variant 1.0
fprA 3473996 c.-11_-10insA upstream_gene_variant 1.0
fprA 3474597 c.591C>A synonymous_variant 1.0
fprA 3475159 p.Asn385Asp missense_variant 1.0
fbiB 3640557 c.-978T>C upstream_gene_variant 0.95
fbiB 3641175 c.-360G>A upstream_gene_variant 0.2
rpoA 3877647 c.861C>T synonymous_variant 0.15
rpoA 3877656 c.852T>G synonymous_variant 0.15
rpoA 3877668 c.840A>G synonymous_variant 0.15
rpoA 3877695 c.813C>G synonymous_variant 0.15
rpoA 3877704 c.804G>T synonymous_variant 0.16
rpoA 3877743 c.765T>C synonymous_variant 0.17
rpoA 3877749 c.759C>T synonymous_variant 0.17
rpoA 3877797 c.711G>C synonymous_variant 0.17
rpoA 3877848 c.660C>T synonymous_variant 0.23
rpoA 3877857 c.651G>A synonymous_variant 0.22
rpoA 3877866 c.642G>C synonymous_variant 0.2
rpoA 3877875 c.633T>C synonymous_variant 0.2
rpoA 3877878 c.630G>A synonymous_variant 0.2
rpoA 3877887 c.621G>C synonymous_variant 0.21
rpoA 3877893 c.615C>T synonymous_variant 0.23
rpoA 3877905 c.603A>G synonymous_variant 0.24
rpoA 3877908 c.600T>C synonymous_variant 0.24
rpoA 3877920 c.588G>C synonymous_variant 0.27
rpoA 3877923 c.585C>T synonymous_variant 0.28
rpoA 3877926 c.582G>C synonymous_variant 0.29
rpoA 3877962 c.546G>T synonymous_variant 0.24
rpoA 3877965 c.543C>G synonymous_variant 0.25
rpoA 3877971 p.Asp179Glu missense_variant 0.24
rpoA 3877986 c.522G>C synonymous_variant 0.15
rpoA 3878079 c.429C>T synonymous_variant 0.16
rpoA 3878082 c.426T>C synonymous_variant 0.16
rpoA 3878103 c.405A>G synonymous_variant 0.21
rpoA 3878118 c.390T>C synonymous_variant 0.19
rpoA 3878124 c.384G>C synonymous_variant 0.19
rpoA 3878127 c.381G>C synonymous_variant 0.21
rpoA 3878143 p.Gly122Asp missense_variant 0.32
rpoA 3878145 c.363C>G synonymous_variant 0.31
rpoA 3878157 c.351C>G synonymous_variant 0.34
rpoA 3878160 c.348C>G synonymous_variant 0.34
rpoA 3878163 c.345C>T synonymous_variant 0.31
rpoA 3878172 c.336G>C synonymous_variant 0.35
rpoA 3878184 c.324C>T synonymous_variant 0.33
rpoA 3878193 c.315T>C synonymous_variant 0.28
rpoA 3878196 p.Glu104Ala missense_variant 0.25
rpoA 3878205 c.303T>C synonymous_variant 0.32
rpoA 3878217 c.291A>G synonymous_variant 0.29
rpoA 3878247 c.261G>C synonymous_variant 0.24
rpoA 3878250 c.258C>G synonymous_variant 0.25
rpoA 3878256 c.252G>C synonymous_variant 0.26
rpoA 3878264 p.Ser82Gly missense_variant 0.25
rpoA 3878271 c.237T>C synonymous_variant 0.24
rpoA 3878283 p.Glu75Asp missense_variant 0.2
rpoA 3878292 c.216T>C synonymous_variant 0.17
rpoA 3878298 c.210A>G synonymous_variant 0.17
rpoA 3878310 c.198G>C synonymous_variant 0.18
rpoA 3878313 c.195G>C synonymous_variant 0.18
rpoA 3878322 c.186A>G synonymous_variant 0.18
clpC1 4038519 p.Arg729Gln missense_variant 0.2
clpC1 4038530 p.Glu725Asp missense_variant 0.19
clpC1 4038533 p.Arg724Gln missense_variant 0.19
clpC1 4038536 c.2169C>G synonymous_variant 0.18
clpC1 4038551 c.2154C>G synonymous_variant 0.21
clpC1 4038563 c.2142C>T synonymous_variant 0.24
clpC1 4038587 c.2118C>G synonymous_variant 0.29
clpC1 4038596 c.2109A>G synonymous_variant 0.29
clpC1 4038623 c.2082A>G synonymous_variant 0.32
clpC1 4038640 p.Asp689Asn missense_variant 0.34
clpC1 4038647 c.2058T>C synonymous_variant 0.33
clpC1 4038653 c.2052C>T synonymous_variant 0.3
clpC1 4038658 p.Lys683Gln missense_variant 0.32
clpC1 4038660 c.2044_2045delTCinsAG synonymous_variant 0.3
clpC1 4038662 c.2043T>C synonymous_variant 0.3
clpC1 4038671 c.2034T>A synonymous_variant 0.29
clpC1 4038674 c.2031C>T synonymous_variant 0.3
clpC1 4038679 p.Pro676Ala missense_variant 0.3
clpC1 4038683 c.2022T>G synonymous_variant 0.3
clpC1 4038695 c.2010C>G synonymous_variant 0.35
clpC1 4038704 c.2001T>C synonymous_variant 0.36
clpC1 4038710 c.1995G>C synonymous_variant 0.36
clpC1 4038713 c.1992T>C synonymous_variant 0.36
clpC1 4038721 c.1984C>T synonymous_variant 0.33
clpC1 4038725 c.1980C>G synonymous_variant 0.28
clpC1 4038740 c.1965G>C synonymous_variant 0.23
clpC1 4038755 c.1950G>T synonymous_variant 0.24
clpC1 4038767 c.1938G>C synonymous_variant 0.23
clpC1 4038770 c.1935C>T synonymous_variant 0.24
clpC1 4038773 c.1932T>C synonymous_variant 0.23
clpC1 4038776 c.1929G>A synonymous_variant 0.21
clpC1 4038779 c.1926C>G synonymous_variant 0.21
clpC1 4038782 c.1923G>C synonymous_variant 0.24
clpC1 4038790 c.1915C>T synonymous_variant 0.24
clpC1 4038812 c.1893T>C synonymous_variant 0.27
clpC1 4038815 c.1890G>T synonymous_variant 0.29
clpC1 4038842 c.1863G>C synonymous_variant 0.29
clpC1 4038878 c.1827A>G synonymous_variant 0.45
clpC1 4038884 c.1821C>T synonymous_variant 0.39
clpC1 4038890 c.1815G>A synonymous_variant 0.38
clpC1 4038905 c.1800A>C synonymous_variant 0.39
clpC1 4038908 c.1797C>G synonymous_variant 0.45
clpC1 4038911 c.1794G>T synonymous_variant 0.45
clpC1 4038914 c.1791G>C synonymous_variant 0.45
clpC1 4038917 c.1788C>T synonymous_variant 0.47
clpC1 4038923 c.1782A>G synonymous_variant 0.49
clpC1 4038941 c.1764G>C synonymous_variant 0.47
clpC1 4038953 c.1752A>G synonymous_variant 0.47
clpC1 4038956 c.1749T>C synonymous_variant 0.5
clpC1 4038965 c.1740T>C synonymous_variant 0.45
clpC1 4038971 c.1734T>C synonymous_variant 0.41
clpC1 4038974 c.1731T>C synonymous_variant 0.41
clpC1 4038989 c.1716T>C synonymous_variant 0.42
clpC1 4038997 c.1708T>C synonymous_variant 0.42
clpC1 4039022 c.1683A>G synonymous_variant 0.4
clpC1 4039064 c.1641C>T synonymous_variant 0.38
clpC1 4039067 c.1638G>C synonymous_variant 0.38
clpC1 4039079 c.1626C>G synonymous_variant 0.34
clpC1 4039085 c.1620A>G synonymous_variant 0.33
clpC1 4039091 c.1614G>T synonymous_variant 0.31
clpC1 4039097 c.1608G>T synonymous_variant 0.27
clpC1 4039106 c.1599G>T synonymous_variant 0.24
clpC1 4039109 c.1596C>T synonymous_variant 0.24
clpC1 4039112 c.1593C>G synonymous_variant 0.25
clpC1 4039121 c.1584T>C synonymous_variant 0.3
clpC1 4039142 c.1563A>G synonymous_variant 0.23
clpC1 4039145 c.1560G>C synonymous_variant 0.21
clpC1 4039169 p.Glu512Asp missense_variant 0.31
clpC1 4039172 c.1533A>G synonymous_variant 0.31
clpC1 4039178 c.1527G>C synonymous_variant 0.25
clpC1 4039183 c.1522T>C synonymous_variant 0.25
clpC1 4039187 c.1518G>C synonymous_variant 0.24
clpC1 4039190 c.1515C>G synonymous_variant 0.24
clpC1 4039208 c.1497C>G synonymous_variant 0.3
clpC1 4039220 c.1485G>C synonymous_variant 0.23
clpC1 4039226 c.1479T>C synonymous_variant 0.29
clpC1 4039241 c.1464G>C synonymous_variant 0.34
clpC1 4039274 c.1431G>C synonymous_variant 0.32
clpC1 4039280 c.1425G>T synonymous_variant 0.35
clpC1 4039283 c.1422C>T synonymous_variant 0.35
clpC1 4039286 c.1419T>C synonymous_variant 0.36
clpC1 4039298 c.1407T>C synonymous_variant 0.37
clpC1 4039310 c.1395A>G synonymous_variant 0.36
clpC1 4039313 c.1392C>T synonymous_variant 0.36
clpC1 4039320 p.Ala462Gly missense_variant 0.28
clpC1 4039328 c.1377A>T synonymous_variant 0.25
clpC1 4039337 c.1368A>C synonymous_variant 0.27
clpC1 4039349 c.1356C>T synonymous_variant 0.18
clpC1 4039430 c.1275T>C synonymous_variant 0.3
clpC1 4039442 c.1263A>G synonymous_variant 0.29
clpC1 4039454 c.1251A>T synonymous_variant 0.38
clpC1 4039463 c.1242C>G synonymous_variant 0.35
clpC1 4039466 c.1239T>C synonymous_variant 0.33
clpC1 4039469 c.1236T>C synonymous_variant 0.46
clpC1 4039472 c.1233G>T synonymous_variant 0.4
clpC1 4039481 c.1224T>C synonymous_variant 0.33
clpC1 4039484 c.1221T>C synonymous_variant 0.3
clpC1 4039487 c.1218G>C synonymous_variant 0.28
clpC1 4039517 c.1188C>G synonymous_variant 0.25
clpC1 4039556 c.1149G>C synonymous_variant 0.25
clpC1 4039559 c.1146C>G synonymous_variant 0.26
clpC1 4039570 p.Met379Leu missense_variant 0.26
clpC1 4039574 p.Ala377Gly missense_variant 0.2
clpC1 4039577 c.1128T>C synonymous_variant 0.22
clpC1 4039589 c.1116G>C synonymous_variant 0.23
clpC1 4039592 c.1113G>C synonymous_variant 0.24
clpC1 4039610 c.1095G>C synonymous_variant 0.3
clpC1 4039622 c.1083C>T synonymous_variant 0.34
clpC1 4039649 c.1056G>C synonymous_variant 0.36
clpC1 4039673 c.1032G>A synonymous_variant 0.39
clpC1 4039682 c.1023C>G synonymous_variant 0.43
clpC1 4039685 c.1020C>T synonymous_variant 0.39
clpC1 4039694 c.1011G>T synonymous_variant 0.47
clpC1 4039724 c.981A>G synonymous_variant 0.4
clpC1 4039733 c.972G>C synonymous_variant 0.32
clpC1 4039742 c.963C>T synonymous_variant 0.33
clpC1 4039748 c.957G>C synonymous_variant 0.24
clpC1 4039751 c.954A>G synonymous_variant 0.23
clpC1 4039757 c.948A>G synonymous_variant 0.2
clpC1 4039763 c.942C>T synonymous_variant 0.22
clpC1 4039766 c.939T>C synonymous_variant 0.22
clpC1 4039769 c.936C>G synonymous_variant 0.22
clpC1 4039775 c.930G>C synonymous_variant 0.24
clpC1 4039778 c.927A>G synonymous_variant 0.24
clpC1 4039793 c.912C>G synonymous_variant 0.22
clpC1 4039802 c.903G>C synonymous_variant 0.17
clpC1 4039889 c.816G>C synonymous_variant 0.19
clpC1 4039898 c.807C>G synonymous_variant 0.21
clpC1 4039904 c.801A>G synonymous_variant 0.23
clpC1 4039907 c.798G>A synonymous_variant 0.26
clpC1 4039931 c.774T>C synonymous_variant 0.26
clpC1 4039934 c.771G>T synonymous_variant 0.27
clpC1 4039946 c.759A>G synonymous_variant 0.29
clpC1 4039952 c.753T>C synonymous_variant 0.3
clpC1 4039955 c.750G>C synonymous_variant 0.3
clpC1 4039958 c.747G>C synonymous_variant 0.35
clpC1 4039991 c.714G>C synonymous_variant 0.38
clpC1 4040015 c.690G>C synonymous_variant 0.41
clpC1 4040021 c.684A>T synonymous_variant 0.4
clpC1 4040024 c.681A>G synonymous_variant 0.41
clpC1 4040033 c.672G>C synonymous_variant 0.39
clpC1 4040087 c.618G>C synonymous_variant 0.21
clpC1 4040090 c.613_615delTCTinsAGC synonymous_variant 0.21
clpC1 4040093 c.612C>G synonymous_variant 0.2
clpC1 4040306 c.399G>C synonymous_variant 0.21
clpC1 4040309 c.396C>G synonymous_variant 0.16
clpC1 4040411 c.294T>C synonymous_variant 0.18
clpC1 4040423 c.282A>G synonymous_variant 0.2
clpC1 4040486 c.219G>A synonymous_variant 0.19
clpC1 4040495 c.210C>G synonymous_variant 0.2
clpC1 4040517 p.Val63Ala missense_variant 0.78
embC 4240167 c.307_309delACG conservative_inframe_deletion 1.0
embC 4240648 c.786C>T synonymous_variant 0.3
embC 4240671 p.Thr270Ile missense_variant 1.0
embC 4240717 c.855T>C synonymous_variant 0.22
embC 4240726 c.864G>C synonymous_variant 0.22
embC 4240729 c.867C>G synonymous_variant 0.2
embC 4240735 c.873C>A synonymous_variant 0.24
embC 4240738 c.876C>G synonymous_variant 0.22
embC 4240759 c.897C>G synonymous_variant 0.23
embC 4240777 c.915G>A synonymous_variant 0.24
embC 4240780 c.918T>C synonymous_variant 0.24
embC 4240783 c.921G>C synonymous_variant 0.24
embC 4240789 c.927T>C synonymous_variant 0.22
embC 4240819 c.957A>T synonymous_variant 0.18
embC 4240825 c.963G>A synonymous_variant 0.16
embC 4240828 c.966G>C synonymous_variant 0.16
embC 4240831 c.969T>G synonymous_variant 0.16
embC 4241042 p.Asn394Asp missense_variant 0.94
embC 4241551 c.1689A>T synonymous_variant 0.18
embC 4241560 c.1698C>G synonymous_variant 0.24
embC 4241584 c.1722T>C synonymous_variant 0.19
embC 4241587 c.1725C>G synonymous_variant 0.22
embC 4241614 c.1752A>C synonymous_variant 0.2
embC 4241644 c.1782G>C synonymous_variant 0.14
embC 4241648 c.1786T>C synonymous_variant 0.13
embC 4241662 c.1800G>C synonymous_variant 0.17
embC 4241665 c.1803G>C synonymous_variant 0.17
embC 4241671 c.1809T>G synonymous_variant 0.17
embA 4242643 c.-590C>T upstream_gene_variant 1.0
embA 4244420 c.1188G>C synonymous_variant 1.0
embA 4245969 p.Pro913Ser missense_variant 1.0
embB 4247646 p.Glu378Ala missense_variant 1.0
embB 4248199 c.1686A>G synonymous_variant 0.16
embB 4248200 p.Ile563Val missense_variant 0.16
embB 4248208 p.Ser565Arg missense_variant 0.15
embB 4248225 p.Ala571Val missense_variant 0.17
embB 4248515 p.Val668Ile missense_variant 1.0
ubiA 4269387 p.Glu149Asp missense_variant 1.0
aftB 4269606 c.-770T>C upstream_gene_variant 1.0
ethR 4327360 c.-189C>G upstream_gene_variant 1.0
whiB6 4338361 p.Arg54Gln missense_variant 1.0
whiB6 4338595 c.-75delG upstream_gene_variant 1.0
whiB6 4338603 c.-82C>T upstream_gene_variant 1.0
gid 4407588 c.615A>G synonymous_variant 1.0
gid 4407873 c.330G>T synonymous_variant 1.0