Rv0682 - c.348T>C


Drug resistance types
106 Sensitive 14 RR-TB 96 HR-TB 25 MDR-TB 7 Pre-XDR-TB 1 XDR-TB 148 Other
lineage Counts
lineage Count
La3;lineage2.1;lineage4.9;lineage6.3 1
lineage4.9 219
lineage4.3.4.2.1 7
lineage4.4.1.2 1
lineage4.3.3 4
La1.7;lineage3;lineage4.9;lineage7 1
lineage4.1;lineage4.9 2
lineage4.1.1.3 3
La1.7;lineage4.9 10
lineage3;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
2
La1.6;lineage4 1
lineage2.2.1 24
lineage4.9;lineage7 5
La1.2 1
lineage4.4.1.1.1 1
La2;lineage2.2 1
lineage3 5
lineage1.2.1.1 1
lineage4.1.2.1 7
La1.7;lineage4.9;lineage7 3
lineage4.8 3
La3;lineage4.9 6
lineage2.2.1;lineage4 2
lineage4 7
La1.2;La1.8.1 1
La1.7;lineage3.1;lineage4 1
La1.8.1 4
lineage4.3.4.1 3
La3;lineage4.3.4 1
lineage4.3.2.1 3
lineage1.2.2.2 1
lineage2;lineage4.9 1
lineage1.1.2 2
lineage4.2.1 2
lineage4.3.1;lineage4.9;lineage6 1
La1;lineage4.1.2 1
La1.2.BCG 2
lineage2.2.1;lineage4.9 2
lineage4.1.1.3;lineage4.9 2
lineage1.1.3.1 1
lineage4.2.1.1;lineage4.3.3 1
lineage2.1;lineage4.9;lineage7 1
lineage4.1.1.2 1
La3;lineage2.1;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage2.2 4
lineage1.1.1 1
La2;lineage4.9 1
La1;lineage2;lineage4.9 1
lineage4.8.1 1
lineage4.9;lineage6.1.3 1
lineage4.5 2
La1.2.BCG;lineage4.9 1
La1;lineage4.9 3
La1.7;M.canetti;lineage4.9 3
lineage2.2.1.2;lineage7 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage4.6.2.2 1
lineage2.1 1
lineage4.8;lineage4.9 2
lineage4.2;lineage4.6.3;lineage4.9.1 2
lineage1.1.1;lineage4 1
lineage5.1.4 1
M.canetti;lineage4.9 2
lineage3.1.3 1
La1.7.1 1
lineage4.1.2 1
lineage6.1.3 1
lineage2.1;lineage4.9 1
lineage1;lineage4.9 1
lineage4.6.3;lineage4.9 1
lineage2.2.1;lineage4.5 1
lineage4.4.1.1 1
La1.7 2
lineage4.2;lineage4.6.3;lineage4.9 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage4.9;lineage9 1
spoligotype Counts
spoligotype Count
None 397
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR1180413 Sensitive lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR11465511 Other lineage4.3.4.2.1 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR9992879 XDR-TB lineage4.3.3 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
SRR12708371 HR-TB lineage4.1.1.3 None
ERR216938 HR-TB La1.7;lineage4.9 None
SRR5341396 Other lineage3;lineage4.9 None
ERR4818110 Sensitive lineage4.9 None
ERR926155 Other lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR349266 Other lineage4.9 None
SRR1180410 Sensitive lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
ERR473334 HR-TB lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
ERR502511 HR-TB lineage4.9 None
ERR971389 Other lineage4.9 None
ERR363446 Other lineage4.9 None
ERR1063896 HR-TB None
SRR28351554 Other La1.6;lineage4 None
SRR12708416 Sensitive None
SRR3675441 RR-TB lineage4.9 None
ERR363449 Other lineage4.9 None
ERR4797264 HR-TB lineage4.9 None
SRR12708418 HR-TB lineage2.2.1 None
ERR4819357 Sensitive lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
ERR4769427 Other La1.2 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
SRR6046046 Other lineage4.9 None
ERR4798099 HR-TB lineage4.9 None
SRR5341298 Other lineage4.9 None
SRR10808668 Other lineage2.2.1 None
ERR363499 Other lineage4.9 None
ERR369158 Other lineage4.9 None
ERR400320 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR3675270 Other lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR3675292 Sensitive lineage4.9 None
ERR6866639 HR-TB lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
SRR10315466 RR-TB lineage2.2.1 None
ERR4596902 MDR-TB lineage3 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR4814734 Other lineage1.2.1.1 None
SRR20969731 Other lineage2.2.1 None
SRR12142339 HR-TB lineage2.2.1 None
ERR363506 Sensitive lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR11465628 Sensitive lineage4.3.4.2.1 None
ERR926157 Other lineage4.9 None
SRR6046245 Other lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
ERR4799025 Other lineage4.8 None
ERR9119669 MDR-TB lineage4.9 None
SRR5341345 Sensitive lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
ERR4816762 Sensitive lineage4.9 None
ERR4818624 Other lineage4.3.4.2.1 None
ERR736837 Pre-XDR-TB lineage4.9 None
SRR1169306 Other La3;lineage4.9 None
SRR16156817 Other lineage4.9 None
ERR363426 Sensitive lineage4.9 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
ERR400345 Other lineage4.9 None
SRR1181349 Sensitive lineage4 None
SRR7240033 Other La1.2;La1.8.1 None
SRR14801749 HR-TB lineage4.9 None
ERR349330 Sensitive lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
SRR1180312 Sensitive lineage4.9 None
SRR7236177 Other La1.8.1 None
ERR11465353 Sensitive lineage4.3.4.1 None
ERR323066 HR-TB lineage4.9 None
SRR5341308 HR-TB lineage4.9 None
ERR9119733 MDR-TB lineage2.2.1 None
ERR161039 HR-TB La3;lineage4.3.4 None
SRR3675477 Sensitive lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR400326 Other lineage4.9 None
SRR12708411 HR-TB lineage1.2.2.2 None
SRR1180996 Other lineage4.9 None
SRR6046382 RR-TB lineage2.2.1 None
SRR6511621 HR-TB lineage4.9 None
SRR6789624 HR-TB lineage4.1.1.3 None
SRR5341323 Sensitive lineage4.9 None
ERR323062 HR-TB lineage4.9 None
ERR3445502 HR-TB lineage4.9;lineage7 None
ERR181744 HR-TB La3;lineage4.9 None
SRR1180946 Sensitive lineage2;lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1175513 Sensitive lineage4.9 None
ERR323037 Other lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
SRR5341432 Other La1.7;lineage4.9;lineage7 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR4596910 Sensitive lineage4.9 None
SRR12708396 MDR-TB lineage4.3.2.1 None
ERR3797073 Other La1.8.1 None
SRR12708384 Sensitive lineage4.9 None
ERR736831 Other lineage4.9 None
SRR5341296 Sensitive lineage4.9 None
SRR10809074 HR-TB lineage4.9 None
ERR926164 Other lineage4.9 None
ERR363502 Other lineage4.9 None
SRR12708372 Sensitive lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR363509 Sensitive lineage4.9 None
SRR5341437 Sensitive lineage4.9 None
ERR4178226 Sensitive lineage4 None
SRR5341293 Sensitive lineage4.9 None
ERR363453 Other lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR9970978 Other La1;lineage4.1.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR363447 Other lineage4.9 None
SRR1158918 Other lineage4.9 None
SRR12708392 Other lineage2.2.1 None
SRR1173777 Sensitive lineage4.9 None
SRR1915485 Other La1.2.BCG None
ERR502510 HR-TB lineage4.9 None
ERR363500 Other lineage4.9 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR12708419 Other lineage4.3.3 None
ERR6865513 Other lineage4.1.2.1 None
SRR2010299 MDR-TB lineage2.2.1 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR1915487 Other La1.2.BCG None
SRR5341456 Other lineage4.9 None
ERR161037 HR-TB lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR11465510 Sensitive lineage4.3.4.2.1 None
ERR926161 Sensitive lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR363456 Sensitive lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
SRR6045053 Other lineage4 None
ERR11252612 Other La3;lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
ERR369162 Other lineage4.9 None
ERR3797029 Other lineage4.9 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR736872 HR-TB lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
ERR779852 HR-TB lineage4.9 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4818252 HR-TB lineage4.1.1.2 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR6359070 Sensitive lineage4.9 None
SRR3619764 Pre-XDR-TB lineage2.2.1 None
ERR4816964 HR-TB lineage4.9 None
SRR1159378 Other lineage4.9 None
SRR6045217 Other lineage4.9 None
ERR349296 Sensitive lineage4.9 None
SRR5535933 Other lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR11462861 Other La1.8.1 None
ERR3283055 HR-TB lineage4.9 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR1791747 Other La1.8.1 None
SRR20969708 HR-TB lineage2.2 None
ERR4821686 Sensitive lineage4.1.2.1 None
SRR6046141 Other lineage4.9 None
ERR6866410 HR-TB lineage4.9 None
ERR4178309 Other lineage4.1.2.1 None
SRR7535082 Other lineage4.9 None
ERR926156 Other lineage4.9 None
ERR4816322 Other lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
SRR3675473 Sensitive lineage4.9 None
ERR4819314 HR-TB lineage1.1.1 None
ERR387051 RR-TB lineage4.9 None
ERR926154 Sensitive lineage4.9 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR2512770 Sensitive lineage4.2.1 None
ERR4799547 HR-TB lineage2.2.1 None
SRR3601585 Pre-XDR-TB lineage2.2.1 None
SRR6045548 Other lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR067699 HR-TB La1;lineage2;lineage4.9 None
SRR9971150 RR-TB lineage4.8.1 None
ERR4818561 Sensitive lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
ERR349265 Other lineage4.9 None
SRR1183965 Sensitive lineage4.9 None
ERR176643 Other La3;lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR4798823 HR-TB lineage4 None
ERR4821655 HR-TB lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR5341310 Other lineage1.1.2 None
ERR6865502 Sensitive lineage4 None
SRR6046897 Sensitive lineage4.9 None
SRR26399490 Sensitive lineage4.9 None
ERR124636 HR-TB lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR11662694 Other lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
ERR926158 Sensitive lineage4.9 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
SRR3675267 Other La1.7;lineage4.9 None
SRR22424787 Sensitive lineage4.9 None
ERR926160 Other lineage4.9 None
ERR4811031 Other lineage4.5 None
SRR1915481 Other La1.2.BCG;lineage4.9 None
SRR3675582 Other lineage4.9 None
ERR400336 Sensitive lineage4.9 None
ERR4811030 Other lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR4814639 HR-TB lineage4.9 None
ERR1035122 HR-TB lineage4.9 None
ERR2446566 Other lineage4.9 None
ERR363498 Other lineage4.9 None
SRR3675585 HR-TB lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
ERR926163 Other lineage4.9 None
SRR5341387 Other lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
ERR751326 Other lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
SRR1183054 Sensitive lineage4.9 None
ERR926159 Sensitive lineage4.9 None
SRR6045706 Other lineage4.9 None
ERR176751 HR-TB lineage4.9 None
SRR10808399 Sensitive lineage4.9 None
SRR9971112 HR-TB lineage2.2.1 None
SRR12708409 HR-TB lineage4.3.3 None
SRR3675387 Other lineage4.9 None
SRR5341453 Other lineage4.9 None
SRR1173281 Other lineage3 None
ERR6359069 HR-TB lineage4.9 None
ERR363490 Other lineage4.9 None
ERR4812155 Other lineage4.9 None
ERR363445 Other lineage4.9 None
ERR4819546 HR-TB lineage3 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR1180444 Sensitive lineage4.9 None
ERR4797313 Sensitive lineage2.2.1 None
SRR14782405 HR-TB lineage4.9 None
SRR16156775 Other lineage4.9 None
ERR473332 Other lineage4.9 None
SRR1165628 Other La3;lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
ERR4769452 Other lineage4.9 None
ERR4819809 HR-TB lineage4.6.2.2 None
ERR2517475 Other lineage4 None
SRR6045892 Sensitive lineage4.9 None
ERR4817915 Other lineage4.9 None
SRR22251329 Other lineage2.1 None
ERR736834 HR-TB lineage4.9 None
ERR5987263 MDR-TB lineage2.2.1 None
ERR6866022 HR-TB lineage4.8;lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR6359082 Other lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
SRR5341299 HR-TB lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR2513283 Sensitive lineage5.1.4 None
SRR6045503 Other lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR369159 Other lineage4.9 None
ERR736856 HR-TB lineage4.9 None
ERR349300 Other lineage4.9 None
ERR6866807 RR-TB lineage4.9 None
ERR137286 Other lineage4.9 None
ERR752229 Other lineage4.5 None
ERR4797474 Other lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
ERR4818710 Sensitive lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR4808964 RR-TB lineage2.2.1 None
SRR6046611 Sensitive lineage4.9 None
SRR5341373 Other lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR3675449 RR-TB M.canetti;lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
ERR373945 Other lineage4.9 None
SRR20632814 Sensitive lineage4.9 None
ERR2513121 Sensitive lineage3.1.3 None
SRR5341330 Other lineage4.9 None
ERR4024991 HR-TB lineage4.8;lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
ERR363421 Other lineage4.9 None
ERR2693252 HR-TB lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
ERR702405 HR-TB lineage4.9 None
SRR6046492 Other lineage4.9 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
SRR6046878 Other lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
SRR9970980 HR-TB lineage4.1.2 None
ERR926165 Other lineage4.9 None
SRR6045832 Other lineage4.9 None
ERR4817667 HR-TB lineage4.8 None
SRR3675492 Other La1.7;lineage4.9 None
ERR363474 Sensitive lineage4.9 None
SRR1167384 Other La3;lineage4.9 None
SRR5341400 Sensitive lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR736848 Other lineage4.9 None
SRR6046564 Sensitive lineage4.9 None
ERR176518 Sensitive lineage4.3.4.2.1 None
SRR1184021 Sensitive lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
ERR369163 Other lineage4.9 None
ERR067712 Sensitive lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
ERR9787256 Other lineage6.1.3 None
ERR4818536 Other lineage4.9 None
SRR14782054 Other lineage4.9 None
SRR3675495 RR-TB lineage2.1;lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR373946 Other lineage4.9 None
SRR3675577 Sensitive lineage4.9 None
SRR12708415 HR-TB lineage2.2.1 None
ERR4769521 RR-TB lineage4.9 None
SRR1181351 Sensitive lineage4.9 None
SRR6045347 Other lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
SRR12708414 HR-TB lineage2.2.1 None
ERR4797350 Sensitive lineage1;lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
ERR11465801 Other lineage4.3.4.1 None
SRR3675580 Sensitive lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR4811035 Pre-XDR-TB lineage2.2.1;lineage4.5 None
ERR349299 Other lineage4.9 None
ERR349264 Other lineage4.9 None
SRR3675318 Other lineage4.9 None
ERR2514552 Sensitive lineage3 None
SRR3675280 RR-TB lineage4.9 None
ERR3273109 HR-TB lineage4 None
SRR3675522 Other lineage4.9 None
SRR3675235 HR-TB lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
SRR3675488 Other La1.7;lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
ERR4815471 HR-TB lineage4.9 None
SRR12708413 HR-TB lineage4.1.1.3 None
SRR1180250 Other lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
ERR4796254 Other lineage4.9 None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR4819462 Sensitive lineage4.9 None
ERR4830353 HR-TB La1.7 None
SRR12416842 HR-TB lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR133825 HR-TB La1;lineage4.9 None
SRR3675246 Other lineage4.9 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR21677886 Sensitive lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR5341455 Sensitive lineage4.9 None
ERR4797184 HR-TB lineage4.9 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR3675456 RR-TB lineage4.9;lineage7 None
ERR3797046 HR-TB lineage4.9 None
SRR3675222 Other La1.7 None
SRR10808730 Other lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
SRR3675247 Other lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR11465352 Sensitive lineage4.3.4.1 None
ERR373947 Other lineage4.9 None
SRR5341467 Other lineage4.9 None
ERR4798431 Other lineage4.1;lineage4.9 None
SRR5341425 Other lineage4.9 None