TB-Profiler result

Run: ERR752229
Summary

Run ID: ERR752229

Sample name:

Date: 02-04-2023 05:02:04

Number of reads: 3377688

Percentage reads mapped: 70.26

Strain: lineage4.5

Drug-resistance: Other

Download CSV Download TXT Download PDF Download JSON
Drug resistance: This table reports drug-resistance associated mutations found in known resistance genes
Drug Resistance Supporting mutations
Lineage Table: The lineage is inferred by analysing lineage specific SNPs
Lineage Family Main Spoligotype RDs Frequency
La1.7.1 M.bovis None None 0.07
lineage4 Euro-American LAM;T;S;X;H None 1.0
lineage4.5 Euro-American H;T RD122 0.97
Drug resistance-Associated Mutations: This table reports mutations found in candidate resistance genes which have been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs
gyrB 6738 p.Thr500Asn missense_variant 0.19 ofloxacin, moxifloxacin, levofloxacin, fluoroquinolones, ciprofloxacin
Non-Associated Mutations: This table reports mutations found in candidate resistance genes which have not been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction
gyrB 6109 c.870G>C synonymous_variant 0.17
gyrB 6115 c.876A>G synonymous_variant 0.16
gyrB 6123 p.Ala295Gly missense_variant 0.17
gyrB 6127 c.888G>T synonymous_variant 0.17
gyrB 6142 c.903G>A synonymous_variant 0.16
gyrB 6148 c.909C>T synonymous_variant 0.15
gyrB 6170 p.His311Ala missense_variant 0.15
gyrA 6362 c.-940T>C upstream_gene_variant 0.19
gyrA 6403 c.-899T>C upstream_gene_variant 0.13
gyrA 6409 c.-893A>G upstream_gene_variant 0.14
gyrB 6416 p.Thr393Gly missense_variant 0.15
gyrA 6427 c.-875T>C upstream_gene_variant 0.14
gyrA 6649 c.-653T>C upstream_gene_variant 0.15
gyrA 6655 c.-647T>C upstream_gene_variant 0.17
gyrA 6673 c.-629A>C upstream_gene_variant 0.24
gyrA 6676 c.-626T>G upstream_gene_variant 0.23
gyrA 6680 c.-622C>T upstream_gene_variant 0.24
gyrA 6703 c.-599G>C upstream_gene_variant 0.23
gyrA 6706 c.-596G>A upstream_gene_variant 0.21
gyrA 6709 c.-593A>G upstream_gene_variant 0.21
gyrA 6712 c.-590G>C upstream_gene_variant 0.21
gyrA 6724 c.-578G>C upstream_gene_variant 0.21
gyrA 6727 c.-575G>C upstream_gene_variant 0.19
gyrA 6730 c.-572A>G upstream_gene_variant 0.19
gyrA 6742 c.-560A>G upstream_gene_variant 0.18
gyrA 6745 c.-557T>C upstream_gene_variant 0.18
gyrA 6760 c.-542G>C upstream_gene_variant 0.19
gyrA 6763 c.-539G>C upstream_gene_variant 0.17
gyrA 6775 c.-527G>C upstream_gene_variant 0.23
gyrA 6778 c.-524C>T upstream_gene_variant 0.22
gyrA 6793 c.-509T>C upstream_gene_variant 0.23
gyrB 6797 p.Gly520Ser missense_variant 0.24
gyrA 6811 c.-491C>T upstream_gene_variant 0.25
gyrA 6841 c.-461T>C upstream_gene_variant 0.24
gyrA 6844 c.-458T>C upstream_gene_variant 0.25
gyrA 6853 c.-449A>G upstream_gene_variant 0.18
gyrA 6856 c.-446T>C upstream_gene_variant 0.15
gyrA 6859 c.-443T>C upstream_gene_variant 0.14
gyrA 7355 c.54T>C synonymous_variant 0.15
gyrA 7362 p.Glu21Gln missense_variant 1.0
gyrA 7394 c.93T>C synonymous_variant 0.15
gyrA 7585 p.Ser95Thr missense_variant 1.0
gyrA 7592 c.291G>C synonymous_variant 0.15
gyrA 7595 c.294C>G synonymous_variant 0.14
gyrA 7607 c.306C>G synonymous_variant 0.16
gyrA 7625 c.324G>A synonymous_variant 0.16
gyrA 7631 c.330G>C synonymous_variant 0.16
gyrA 7742 c.441G>A synonymous_variant 0.16
gyrA 7745 c.444G>A synonymous_variant 0.16
gyrA 7758 p.Ile153Val missense_variant 0.18
gyrA 7763 c.462T>G synonymous_variant 0.19
gyrA 7778 c.477G>T synonymous_variant 0.28
gyrA 7784 c.483A>G synonymous_variant 0.29
gyrA 7787 c.486G>A synonymous_variant 0.3
gyrA 7799 c.498A>G synonymous_variant 0.3
gyrA 7832 c.531G>C synonymous_variant 0.23
gyrA 7835 c.534A>C synonymous_variant 0.22
gyrA 7853 c.552C>T synonymous_variant 0.21
gyrA 7859 c.558A>G synonymous_variant 0.2
gyrA 7865 c.564T>C synonymous_variant 0.16
gyrA 7892 c.591G>A synonymous_variant 1.0
gyrA 8253 p.Ile318Val missense_variant 0.18
gyrA 8264 c.963T>C synonymous_variant 0.3
gyrA 8270 c.969G>T synonymous_variant 0.34
gyrA 8283 p.Ile328Leu missense_variant 0.35
gyrA 8288 c.987T>C synonymous_variant 0.35
gyrA 8294 c.993T>C synonymous_variant 0.38
gyrA 8324 c.1023T>C synonymous_variant 0.37
gyrA 8339 c.1038A>C synonymous_variant 0.35
gyrA 8340 p.Ala347Ser missense_variant 0.33
gyrA 8357 c.1056G>A synonymous_variant 0.23
gyrA 8801 c.1500G>C synonymous_variant 0.21
gyrA 8810 c.1509A>T synonymous_variant 0.2
gyrA 8813 c.1512C>T synonymous_variant 0.2
gyrA 8817 p.Ser506Ala missense_variant 0.19
gyrA 8829 c.1528T>C synonymous_variant 0.25
gyrA 8849 c.1548C>G synonymous_variant 0.31
gyrA 8852 c.1551T>C synonymous_variant 0.32
gyrA 8858 c.1557T>G synonymous_variant 0.31
gyrA 8867 c.1566A>G synonymous_variant 0.3
gyrA 8870 c.1569G>C synonymous_variant 0.26
gyrA 8873 c.1572A>T synonymous_variant 0.27
gyrA 8876 c.1575C>T synonymous_variant 0.27
gyrA 8897 c.1596T>C synonymous_variant 0.29
gyrA 8903 c.1602T>C synonymous_variant 0.28
gyrA 8915 c.1614A>G synonymous_variant 0.32
gyrA 8918 c.1617C>T synonymous_variant 0.34
gyrA 8930 c.1629C>T synonymous_variant 0.27
gyrA 8939 c.1638T>C synonymous_variant 0.23
gyrA 8942 c.1641G>A synonymous_variant 0.22
gyrA 8945 c.1644G>C synonymous_variant 0.2
gyrA 8946 c.1645_1647delTTGinsCTC synonymous_variant 0.2
gyrA 8951 c.1650G>A synonymous_variant 0.22
gyrA 8981 c.1680G>C synonymous_variant 0.25
gyrA 8990 c.1689C>G synonymous_variant 0.2
gyrA 8996 c.1695T>C synonymous_variant 0.17
gyrA 8998 p.Leu566Trp missense_variant 0.17
gyrA 9227 c.1926C>G synonymous_variant 0.14
gyrA 9230 c.1929T>C synonymous_variant 0.13
gyrA 9233 c.1932C>A synonymous_variant 0.14
gyrA 9248 c.1947G>C synonymous_variant 0.14
gyrA 9257 c.1956C>T synonymous_variant 0.14
gyrA 9281 c.1980C>G synonymous_variant 0.14
gyrA 9284 c.1983T>A synonymous_variant 0.13
gyrA 9304 p.Gly668Asp missense_variant 1.0
gyrA 9320 c.2019G>A synonymous_variant 0.18
gyrA 9323 c.2022C>G synonymous_variant 0.19
gyrA 9335 c.2034G>C synonymous_variant 0.23
gyrA 9356 c.2055G>C synonymous_variant 0.25
gyrA 9362 c.2061C>T synonymous_variant 0.24
gyrA 9377 c.2076A>G synonymous_variant 0.22
gyrA 9383 c.2082T>C synonymous_variant 0.25
gyrA 9386 c.2085T>C synonymous_variant 0.25
gyrA 9395 c.2094G>T synonymous_variant 0.26
gyrA 9413 c.2112G>A synonymous_variant 0.17
gyrA 9419 c.2118T>C synonymous_variant 0.14
gyrA 9420 p.Ile707Ala missense_variant 0.14
fgd1 491223 c.441C>G synonymous_variant 0.15
fgd1 491226 c.444C>G synonymous_variant 0.16
fgd1 491232 c.450T>C synonymous_variant 0.21
fgd1 491244 c.462T>C synonymous_variant 0.26
fgd1 491248 p.Arg156Lys missense_variant 0.25
fgd1 491259 c.477T>C synonymous_variant 0.25
fgd1 491280 c.498C>G synonymous_variant 0.25
fgd1 491283 p.Asp167Glu missense_variant 0.26
fgd1 491284 p.Gly168Ser missense_variant 0.26
fgd1 491292 c.510G>C synonymous_variant 0.27
fgd1 491310 c.528C>G synonymous_variant 0.32
fgd1 491316 c.534C>G synonymous_variant 0.26
fgd1 491328 c.546C>G synonymous_variant 0.17
fgd1 491640 c.858G>C synonymous_variant 0.18
fgd1 491643 c.861G>C synonymous_variant 0.17
fgd1 491652 c.870C>G synonymous_variant 0.17
ccsA 620029 c.139C>T synonymous_variant 1.0
ccsA 620349 c.459A>G synonymous_variant 0.13
ccsA 620361 c.471C>T synonymous_variant 0.16
ccsA 620366 p.Asn159Thr missense_variant 0.17
ccsA 620373 c.483C>G synonymous_variant 0.21
ccsA 620379 c.489G>C synonymous_variant 0.22
ccsA 620385 c.495G>C synonymous_variant 0.23
ccsA 620388 c.498A>G synonymous_variant 0.23
ccsA 620409 c.519C>G synonymous_variant 0.23
ccsA 620412 c.522T>C synonymous_variant 0.22
ccsA 620415 c.525T>C synonymous_variant 0.21
ccsA 620431 p.Leu181Ile missense_variant 0.19
ccsA 620439 c.549T>C synonymous_variant 0.16
ccsA 620445 c.555A>G synonymous_variant 0.15
ccsA 620541 c.651G>C synonymous_variant 0.14
ccsA 620547 c.657C>G synonymous_variant 0.17
ccsA 620559 c.669A>G synonymous_variant 0.17
ccsA 620569 p.Gly227Arg missense_variant 0.2
ccsA 620604 c.714C>G synonymous_variant 0.23
ccsA 620607 c.717T>G synonymous_variant 0.22
ccsA 620625 c.735A>C synonymous_variant 0.24
ccsA 620631 c.741T>G synonymous_variant 0.24
ccsA 620634 c.744C>G synonymous_variant 0.23
ccsA 620648 p.Glu253Gly missense_variant 0.19
ccsA 620652 c.762C>G synonymous_variant 0.21
rpoB 760091 c.285G>C synonymous_variant 0.14
rpoB 760101 c.295T>C synonymous_variant 0.16
rpoB 760112 c.306T>C synonymous_variant 0.18
rpoB 760118 c.312T>G synonymous_variant 0.19
rpoB 760121 c.315T>G synonymous_variant 0.2
rpoB 760130 p.Asp108Glu missense_variant 0.23
rpoB 760139 c.333A>C synonymous_variant 0.21
rpoB 760142 c.336C>G synonymous_variant 0.19
rpoB 760148 p.Asp114Glu missense_variant 0.19
rpoB 760155 p.Lys117Arg missense_variant 0.17
rpoB 760172 c.366G>T synonymous_variant 0.2
rpoB 760181 c.375T>C synonymous_variant 0.2
rpoB 760184 c.378A>G synonymous_variant 0.21
rpoB 760199 c.393C>G synonymous_variant 0.19
rpoB 760223 c.417T>C synonymous_variant 0.25
rpoB 760235 c.429T>C synonymous_variant 0.23
rpoB 760283 c.477G>C synonymous_variant 0.27
rpoB 760298 c.492G>C synonymous_variant 0.25
rpoB 760307 c.501T>G synonymous_variant 0.24
rpoB 760317 c.511_512delAGinsTC synonymous_variant 0.22
rpoB 760331 c.525G>T synonymous_variant 0.19
rpoB 760340 c.534G>T synonymous_variant 0.14
rpoB 760547 c.741G>C synonymous_variant 0.17
rpoB 760563 p.Arg253Met missense_variant 0.2
rpoB 760587 p.Thr261Ala missense_variant 0.23
rpoB 760591 p.Val262Ala missense_variant 0.22
rpoB 760593 p.Gly263Asn missense_variant 0.22
rpoB 760596 p.Thr264Ser missense_variant 0.24
rpoB 760611 c.805T>C synonymous_variant 0.31
rpoB 760649 c.843G>C synonymous_variant 0.29
rpoB 760655 c.849A>G synonymous_variant 0.3
rpoB 760661 c.855A>C synonymous_variant 0.29
rpoB 760674 c.868T>C synonymous_variant 0.23
rpoB 760679 c.873A>G synonymous_variant 0.23
rpoB 760683 c.877T>C synonymous_variant 0.24
rpoB 760916 c.1110C>G synonymous_variant 0.19
rpoB 760919 c.1113C>T synonymous_variant 0.19
rpoB 760925 c.1119T>C synonymous_variant 0.18
rpoB 760928 c.1122G>C synonymous_variant 0.17
rpoB 760931 c.1125C>G synonymous_variant 0.18
rpoB 760934 c.1128C>T synonymous_variant 0.18
rpoB 760946 c.1140A>G synonymous_variant 0.23
rpoB 760964 c.1158C>G synonymous_variant 0.21
rpoB 760965 p.Met387Leu missense_variant 0.22
rpoB 760970 c.1164G>C synonymous_variant 0.23
rpoB 760982 c.1176G>C synonymous_variant 0.28
rpoB 760991 c.1185G>C synonymous_variant 0.3
rpoB 761015 c.1209G>C synonymous_variant 0.25
rpoB 761021 c.1215G>C synonymous_variant 0.28
rpoB 761027 c.1221A>G synonymous_variant 0.3
rpoB 761036 c.1230G>C synonymous_variant 0.31
rpoB 761037 c.1231T>C synonymous_variant 0.29
rpoB 761051 c.1245G>C synonymous_variant 0.28
rpoB 761066 c.1260G>C synonymous_variant 0.26
rpoB 761075 c.1269G>A synonymous_variant 0.28
rpoB 761097 c.1291_1293delAGCinsTCG synonymous_variant 0.31
rpoB 761102 c.1296A>G synonymous_variant 0.3
rpoB 761129 c.1323G>A synonymous_variant 0.25
rpoB 761132 c.1326G>T synonymous_variant 0.25
rpoB 761133 c.1327T>C synonymous_variant 0.25
rpoB 761147 c.1341C>G synonymous_variant 0.29
rpoB 761150 c.1344A>T synonymous_variant 0.27
rpoB 761165 c.1359G>C synonymous_variant 0.21
rpoB 761171 c.1365C>T synonymous_variant 0.16
rpoB 761180 c.1374A>G synonymous_variant 0.16
rpoB 761189 c.1383T>C synonymous_variant 0.18
rpoB 761195 c.1389G>C synonymous_variant 0.2
rpoB 761201 c.1395G>A synonymous_variant 0.18
rpoB 761204 c.1398C>T synonymous_variant 0.21
rpoB 761207 c.1401C>T synonymous_variant 0.22
rpoB 761222 c.1416G>C synonymous_variant 0.2
rpoB 761240 c.1434C>T synonymous_variant 0.2
rpoB 761249 c.1443A>G synonymous_variant 0.19
rpoB 761252 c.1446C>G synonymous_variant 0.2
rpoB 761255 c.1449T>G synonymous_variant 0.2
rpoB 761258 c.1452G>A synonymous_variant 0.21
rpoB 761261 c.1455G>C synonymous_variant 0.2
rpoB 761282 c.1476C>A synonymous_variant 0.24
rpoB 761318 c.1512G>T synonymous_variant 0.3
rpoB 761327 c.1521A>G synonymous_variant 0.27
rpoB 761330 c.1524G>C synonymous_variant 0.24
rpoB 761333 c.1527G>C synonymous_variant 0.25
rpoB 761345 c.1539G>C synonymous_variant 0.27
rpoB 761346 p.Val514Asn missense_variant 0.26
rpoB 761354 c.1548C>T synonymous_variant 0.25
rpoB 761360 c.1554T>C synonymous_variant 0.27
rpoB 761369 p.Glu521Asp missense_variant 0.27
rpoB 761374 p.Val523Glu missense_variant 0.26
rpoB 761408 c.1602G>C synonymous_variant 0.14
rpoB 761477 c.1671C>T synonymous_variant 0.14
rpoB 761482 p.Ala559Gly missense_variant 0.15
rpoB 761489 c.1683G>A synonymous_variant 0.16
rpoB 761492 c.1686G>C synonymous_variant 0.16
rpoB 761502 p.Pro566Ser missense_variant 0.21
rpoB 761510 c.1704T>C synonymous_variant 0.25
rpoB 761516 c.1710G>C synonymous_variant 0.28
rpoB 761537 c.1731C>G synonymous_variant 0.3
rpoB 761561 c.1755C>G synonymous_variant 0.28
rpoB 761564 c.1758G>C synonymous_variant 0.27
rpoB 761573 c.1767C>G synonymous_variant 0.27
rpoB 761579 c.1773G>C synonymous_variant 0.26
rpoB 761606 c.1800C>G synonymous_variant 0.31
rpoB 761612 c.1806G>T synonymous_variant 0.29
rpoB 761615 c.1809A>C synonymous_variant 0.29
rpoB 761636 c.1830G>T synonymous_variant 0.28
rpoB 761645 c.1839C>G synonymous_variant 0.23
rpoB 761648 c.1842T>C synonymous_variant 0.24
rpoB 761657 c.1851C>A synonymous_variant 0.23
rpoB 761669 c.1863C>T synonymous_variant 0.21
rpoB 761675 c.1869G>C synonymous_variant 0.2
rpoB 761690 c.1884G>C synonymous_variant 0.19
rpoB 761760 p.Ile652Val missense_variant 0.17
rpoB 761765 c.1959T>G synonymous_variant 0.17
rpoB 761772 p.His656Ala missense_variant 0.18
rpoB 761778 p.Asn658Asp missense_variant 0.2
rpoB 761791 p.Arg662Gln missense_variant 0.19
rpoB 761813 c.2007T>C synonymous_variant 0.24
rpoB 761814 p.Ala670Asn missense_variant 0.24
rpoB 761834 c.2028T>C synonymous_variant 0.21
rpoB 761847 p.Cys681Arg missense_variant 0.15
rpoB 761852 c.2046C>G synonymous_variant 0.14
rpoB 761858 c.2052G>C synonymous_variant 0.15
rpoB 761864 c.2058G>C synonymous_variant 0.16
rpoB 761868 p.Asp688Gln missense_variant 0.15
rpoB 761873 c.2067A>T synonymous_variant 0.17
rpoB 761885 c.2079T>C synonymous_variant 0.18
rpoB 761903 c.2097T>G synonymous_variant 0.23
rpoB 761906 c.2100C>G synonymous_variant 0.21
rpoB 761909 c.2103T>C synonymous_variant 0.2
rpoB 761912 c.2106T>C synonymous_variant 0.2
rpoB 761916 p.Asp704Asn missense_variant 0.2
rpoB 761921 c.2115C>T synonymous_variant 0.22
rpoB 761930 c.2124G>T synonymous_variant 0.2
rpoB 761948 c.2142G>C synonymous_variant 0.22
rpoB 761954 c.2148C>G synonymous_variant 0.2
rpoB 761969 c.2163G>A synonymous_variant 0.22
rpoB 761990 c.2184G>C synonymous_variant 0.19
rpoB 762008 c.2202C>G synonymous_variant 0.13
rpoB 762011 c.2205G>C synonymous_variant 0.13
rpoB 762014 c.2208C>G synonymous_variant 0.14
rpoB 762017 c.2211A>G synonymous_variant 0.14
rpoB 762053 c.2247T>C synonymous_variant 0.21
rpoB 762062 c.2256T>C synonymous_variant 0.16
rpoB 762065 c.2259T>C synonymous_variant 0.15
rpoB 762083 c.2277T>C synonymous_variant 0.17
rpoB 762086 c.2280G>C synonymous_variant 0.17
rpoB 762101 c.2295C>G synonymous_variant 0.21
rpoB 762114 p.Ile770Val missense_variant 0.24
rpoB 762131 c.2325C>G synonymous_variant 0.21
rpoB 762134 c.2328C>T synonymous_variant 0.2
rpoB 762140 c.2334G>C synonymous_variant 0.21
rpoB 762143 c.2337T>C synonymous_variant 0.21
rpoB 762149 c.2343G>C synonymous_variant 0.22
rpoB 762158 c.2352G>C synonymous_variant 0.21
rpoB 762167 c.2361T>C synonymous_variant 0.2
rpoB 762176 c.2370T>C synonymous_variant 0.24
rpoB 762185 c.2379G>C synonymous_variant 0.24
rpoB 762212 c.2406G>C synonymous_variant 0.29
rpoB 762233 c.2427G>C synonymous_variant 0.29
rpoB 762254 c.2448T>G synonymous_variant 0.31
rpoB 762257 c.2451C>G synonymous_variant 0.31
rpoB 762266 c.2460T>C synonymous_variant 0.3
rpoB 762281 c.2475G>A synonymous_variant 0.32
rpoB 762284 c.2478G>C synonymous_variant 0.33
rpoB 762293 c.2487T>C synonymous_variant 0.35
rpoB 762314 c.2508C>T synonymous_variant 0.35
rpoB 762317 c.2511A>G synonymous_variant 0.33
rpoB 762320 c.2514C>G synonymous_variant 0.33
rpoB 762329 c.2523G>C synonymous_variant 0.32
rpoB 762338 c.2532T>C synonymous_variant 0.31
rpoB 762347 c.2541T>C synonymous_variant 0.33
rpoB 762362 p.Glu852Asp missense_variant 0.36
rpoB 762369 c.2563T>C synonymous_variant 0.36
rpoC 762374 c.-996G>C upstream_gene_variant 0.36
rpoC 762380 c.-990T>G upstream_gene_variant 0.34
rpoC 762398 c.-972T>C upstream_gene_variant 0.3
rpoC 762401 c.-969G>C upstream_gene_variant 0.3
rpoC 762404 c.-966T>C upstream_gene_variant 0.28
rpoC 762407 c.-963G>C upstream_gene_variant 0.28
rpoC 762410 c.-960T>G upstream_gene_variant 0.29
rpoC 762416 c.-954A>G upstream_gene_variant 0.33
rpoC 762449 c.-921C>T upstream_gene_variant 0.25
rpoC 762452 c.-918G>C upstream_gene_variant 0.2
rpoC 762470 c.-900G>C upstream_gene_variant 0.22
rpoC 762491 c.-879T>C upstream_gene_variant 0.23
rpoC 762509 c.-861T>G upstream_gene_variant 0.25
rpoB 762510 p.Ala902Pro missense_variant 0.25
rpoC 762527 c.-843G>C upstream_gene_variant 0.22
rpoC 762533 c.-837T>C upstream_gene_variant 0.22
rpoC 762536 c.-834T>C upstream_gene_variant 0.21
rpoC 762551 c.-819C>T upstream_gene_variant 0.23
rpoC 762563 c.-807G>C upstream_gene_variant 0.19
rpoB 762814 p.Met1003Thr missense_variant 0.22
rpoC 762818 c.-552C>G upstream_gene_variant 0.21
rpoC 762827 c.-543G>C upstream_gene_variant 0.16
rpoC 762831 c.-539_-538delAGinsTC upstream_gene_variant 0.17
rpoC 762836 c.-534C>T upstream_gene_variant 0.16
rpoC 762857 c.-513C>G upstream_gene_variant 0.23
rpoC 762860 c.-510G>C upstream_gene_variant 0.21
rpoC 762863 c.-507T>C upstream_gene_variant 0.21
rpoC 762917 c.-453C>G upstream_gene_variant 0.32
rpoC 762920 c.-450C>T upstream_gene_variant 0.34
rpoC 762929 c.-441G>T upstream_gene_variant 0.37
rpoC 762995 c.-375G>T upstream_gene_variant 0.33
rpoC 763031 c.-339T>G upstream_gene_variant 0.36
rpoC 763034 c.-336C>G upstream_gene_variant 0.37
rpoC 763040 c.-330C>G upstream_gene_variant 0.36
rpoC 763053 c.-317T>C upstream_gene_variant 0.35
rpoC 763058 c.-312C>G upstream_gene_variant 0.37
rpoC 763076 c.-294C>G upstream_gene_variant 0.34
rpoC 763082 c.-288C>T upstream_gene_variant 0.34
rpoC 763094 c.-276G>C upstream_gene_variant 0.34
rpoC 763115 c.-255T>C upstream_gene_variant 0.3
rpoC 763127 c.-243G>C upstream_gene_variant 0.27
rpoC 763136 c.-234C>T upstream_gene_variant 0.28
rpoC 763142 c.-228C>G upstream_gene_variant 0.31
rpoC 763148 c.-222G>C upstream_gene_variant 0.33
rpoC 763158 c.-212C>T upstream_gene_variant 0.32
rpoC 763166 c.-204A>G upstream_gene_variant 0.3
rpoC 763169 c.-201A>G upstream_gene_variant 0.29
rpoC 763187 c.-183C>G upstream_gene_variant 0.31
rpoC 763193 c.-177C>G upstream_gene_variant 0.3
rpoC 763202 c.-168A>G upstream_gene_variant 0.28
rpoB 763203 p.Ser1133Ala missense_variant 0.28
rpoB 763207 p.Ser1134Lys missense_variant 0.29
rpoC 763227 c.-143C>T upstream_gene_variant 0.3
rpoC 763238 c.-132T>C upstream_gene_variant 0.23
rpoC 763262 c.-108C>A upstream_gene_variant 0.17
rpoC 763265 c.-105G>C upstream_gene_variant 0.17
rpoC 763396 c.27A>G synonymous_variant 0.21
rpoC 763408 c.39T>C synonymous_variant 0.25
rpoC 763411 c.42T>G synonymous_variant 0.24
rpoC 763414 c.45T>C synonymous_variant 0.26
rpoC 763430 c.61A>C synonymous_variant 0.3
rpoC 763444 c.75T>C synonymous_variant 0.27
rpoC 763447 c.78C>T synonymous_variant 0.28
rpoC 763456 c.87A>G synonymous_variant 0.32
rpoC 763465 c.96G>A synonymous_variant 0.33
rpoC 763468 c.99G>A synonymous_variant 0.32
rpoC 763486 c.117T>C synonymous_variant 0.28
rpoC 763495 c.126G>A synonymous_variant 0.31
rpoC 763528 c.159G>A synonymous_variant 0.35
rpoC 763546 c.177A>G synonymous_variant 0.34
rpoC 763570 c.201G>C synonymous_variant 0.34
rpoC 763594 c.225C>T synonymous_variant 0.33
rpoC 763603 c.234C>T synonymous_variant 0.36
rpoC 763618 c.249C>T synonymous_variant 0.3
rpoC 763657 c.288G>A synonymous_variant 0.29
rpoC 763660 c.291T>G synonymous_variant 0.28
rpoC 763666 c.297G>C synonymous_variant 0.28
rpoC 763669 c.300C>G synonymous_variant 0.28
rpoC 763696 c.327T>C synonymous_variant 0.24
rpoC 763702 c.333C>G synonymous_variant 0.23
rpoC 763708 c.339G>C synonymous_variant 0.21
rpoC 763709 c.340C>T synonymous_variant 0.21
rpoC 763714 c.345G>C synonymous_variant 0.21
rpoC 763717 c.348T>C synonymous_variant 0.22
rpoC 763732 c.363C>G synonymous_variant 0.18
rpoC 763735 c.366G>C synonymous_variant 0.16
rpoC 763900 c.531G>C synonymous_variant 0.16
rpoC 763921 c.552G>C synonymous_variant 0.25
rpoC 763927 c.558C>T synonymous_variant 0.27
rpoC 763947 p.Ala193Val missense_variant 0.25
rpoC 763951 c.582G>C synonymous_variant 0.23
rpoC 763960 c.591T>G synonymous_variant 0.18
rpoC 763987 c.618C>T synonymous_variant 0.16
rpoC 764143 c.774G>C synonymous_variant 0.22
rpoC 764161 c.792G>C synonymous_variant 0.28
rpoC 764188 c.819A>G synonymous_variant 0.24
rpoC 764191 c.822C>G synonymous_variant 0.24
rpoC 764203 c.834G>C synonymous_variant 0.21
rpoC 764206 c.837T>C synonymous_variant 0.2
rpoC 764207 p.Val280Ile missense_variant 0.2
rpoC 764213 p.Arg282Lys missense_variant 0.21
rpoC 764254 c.885G>C synonymous_variant 0.31
rpoC 764257 c.888G>C synonymous_variant 0.31
rpoC 764263 c.894G>T synonymous_variant 0.32
rpoC 764269 c.900G>C synonymous_variant 0.31
rpoC 764278 c.909A>G synonymous_variant 0.35
rpoC 764293 c.924G>C synonymous_variant 0.39
rpoC 764317 c.948C>G synonymous_variant 0.41
rpoC 764320 c.951C>G synonymous_variant 0.4
rpoC 764344 c.975C>T synonymous_variant 0.39
rpoC 764365 c.996C>T synonymous_variant 0.27
rpoC 764383 c.1014C>G synonymous_variant 0.17
rpoC 764387 c.1018_1020delTTGinsCTC synonymous_variant 0.17
rpoC 764404 c.1035C>T synonymous_variant 0.18
rpoC 764405 c.1036A>C synonymous_variant 0.17
rpoC 764410 c.1041G>C synonymous_variant 0.23
rpoC 764428 c.1059G>C synonymous_variant 0.2
rpoC 764431 c.1062G>C synonymous_variant 0.21
rpoC 764434 c.1065A>G synonymous_variant 0.2
rpoC 764435 c.1066_1068delAGGinsCGA synonymous_variant 0.2
rpoC 764446 c.1077T>C synonymous_variant 0.23
rpoC 764449 c.1080G>C synonymous_variant 0.23
rpoC 764455 c.1086G>C synonymous_variant 0.25
rpoC 764458 c.1089G>C synonymous_variant 0.25
rpoC 764461 c.1092A>G synonymous_variant 0.27
rpoC 764497 c.1128A>G synonymous_variant 0.28
rpoC 764521 c.1152T>C synonymous_variant 0.18
rpoC 764527 c.1158C>T synonymous_variant 0.23
rpoC 764539 c.1170C>G synonymous_variant 0.33
rpoC 764548 c.1179G>A synonymous_variant 0.3
rpoC 764566 c.1197C>G synonymous_variant 0.33
rpoC 764575 c.1206T>G synonymous_variant 0.31
rpoC 764576 c.1207_1208delTCinsAG synonymous_variant 0.31
rpoC 764581 c.1212T>C synonymous_variant 0.33
rpoC 764611 c.1242G>T synonymous_variant 0.33
rpoC 764626 c.1257C>T synonymous_variant 0.31
rpoC 764650 c.1281G>T synonymous_variant 0.32
rpoC 764656 c.1287C>G synonymous_variant 0.31
rpoC 764668 c.1299C>T synonymous_variant 0.3
rpoC 764680 c.1311G>A synonymous_variant 0.3
rpoC 764746 c.1377G>A synonymous_variant 0.25
rpoC 764752 c.1383G>T synonymous_variant 0.27
rpoC 764764 c.1395T>C synonymous_variant 0.3
rpoC 764791 c.1422C>G synonymous_variant 0.28
rpoC 764803 c.1434C>G synonymous_variant 0.28
rpoC 764809 c.1440C>T synonymous_variant 0.3
rpoC 764815 c.1446A>G synonymous_variant 0.29
rpoC 764824 c.1455T>C synonymous_variant 0.3
rpoC 764827 c.1458G>C synonymous_variant 0.3
rpoC 764858 c.1489T>C synonymous_variant 0.27
rpoC 764863 c.1494G>C synonymous_variant 0.25
rpoC 764878 c.1509C>G synonymous_variant 0.24
rpoC 764887 c.1518G>C synonymous_variant 0.23
rpoC 764888 c.1519T>C synonymous_variant 0.22
rpoC 764896 c.1527C>T synonymous_variant 0.21
rpoC 764911 c.1542A>G synonymous_variant 0.17
rpoC 764912 p.Met515Gln missense_variant 0.17
rpoC 764932 c.1563C>G synonymous_variant 0.18
rpoC 764935 c.1566T>C synonymous_variant 0.17
rpoC 764948 c.1579T>C synonymous_variant 0.2
rpoC 764962 c.1593G>C synonymous_variant 0.21
rpoC 764968 c.1599T>C synonymous_variant 0.24
rpoC 765007 c.1638T>G synonymous_variant 0.22
rpoC 765008 c.1639T>C synonymous_variant 0.22
rpoC 765013 c.1644C>T synonymous_variant 0.22
rpoC 765016 c.1647C>T synonymous_variant 0.22
rpoC 765019 c.1650A>G synonymous_variant 0.22
rpoC 765034 c.1665T>C synonymous_variant 0.25
rpoC 765040 c.1671T>C synonymous_variant 0.2
rpoC 765041 c.1672T>C synonymous_variant 0.2
rpoC 765047 c.1678T>C synonymous_variant 0.22
rpoC 765076 c.1707A>C synonymous_variant 0.2
rpoC 765079 c.1710T>G synonymous_variant 0.21
rpoC 765082 c.1713G>T synonymous_variant 0.2
rpoC 765089 c.1720T>C synonymous_variant 0.21
rpoC 765103 c.1734G>T synonymous_variant 0.21
rpoC 765115 c.1746G>T synonymous_variant 0.17
rpoC 765405 p.Leu679Pro missense_variant 0.13
rpoC 765409 c.2040T>G synonymous_variant 0.16
rpoC 765412 c.2043T>C synonymous_variant 0.15
rpoC 765421 c.2052C>G synonymous_variant 0.25
rpoC 765445 c.2076G>T synonymous_variant 0.3
rpoC 765453 p.Ala695Val missense_variant 0.34
rpoC 765478 c.2109T>C synonymous_variant 0.34
rpoC 765526 c.2157C>G synonymous_variant 0.33
rpoC 765533 p.Tyr722His missense_variant 0.32
rpoC 765547 c.2178C>T synonymous_variant 0.26
rpoC 765548 c.2179_2181delAGCinsTCG synonymous_variant 0.27
rpoC 765553 c.2184C>T synonymous_variant 0.3
rpoC 765556 c.2187G>C synonymous_variant 0.3
rpoC 765562 c.2193G>C synonymous_variant 0.33
rpoC 765611 p.His748Ser missense_variant 0.28
rpoC 765625 c.2256C>T synonymous_variant 0.31
rpoC 765628 c.2259G>C synonymous_variant 0.31
rpoC 765635 p.Val756Leu missense_variant 0.32
rpoC 765640 c.2271A>G synonymous_variant 0.3
rpoC 765658 c.2289C>T synonymous_variant 0.28
rpoC 765661 c.2292T>C synonymous_variant 0.25
rpoC 765662 c.2293_2295delTTGinsCTC synonymous_variant 0.25
rpoC 765669 p.His767Arg missense_variant 0.26
rpoC 765673 p.Asp768Glu missense_variant 0.25
rpoC 765700 c.2331T>C synonymous_variant 0.29
rpoC 765709 p.Glu780Asp missense_variant 0.24
rpoC 765718 p.Asp783Glu missense_variant 0.19
rpoC 765721 c.2352G>A synonymous_variant 0.2
rpoC 765724 c.2355C>G synonymous_variant 0.21
rpoC 765734 c.2365T>C synonymous_variant 0.2
rpoC 765739 c.2370G>T synonymous_variant 0.19
rpoC 765742 p.Glu791Asp missense_variant 0.18
rpoC 765751 c.2382C>G synonymous_variant 0.16
rpoC 765753 p.Asp795Ala missense_variant 0.15
rpoC 765772 c.2403C>G synonymous_variant 0.26
rpoC 765787 c.2418C>T synonymous_variant 0.21
rpoC 765790 c.2421C>T synonymous_variant 0.21
rpoC 765793 c.2424C>G synonymous_variant 0.21
rpoC 765796 c.2427C>T synonymous_variant 0.24
rpoC 765811 c.2442T>C synonymous_variant 0.28
rpoC 765814 c.2445A>G synonymous_variant 0.27
rpoC 765823 c.2454C>G synonymous_variant 0.26
rpoC 765826 c.2457T>C synonymous_variant 0.27
rpoC 765835 c.2466C>T synonymous_variant 0.3
rpoC 765871 c.2502T>C synonymous_variant 0.32
rpoC 765875 p.Val836Ile missense_variant 0.32
rpoC 765904 c.2535C>G synonymous_variant 0.33
rpoC 765934 c.2565C>T synonymous_variant 0.3
rpoC 765967 c.2598C>T synonymous_variant 0.21
rpoC 765973 c.2604C>T synonymous_variant 0.19
rpoC 765979 c.2610C>G synonymous_variant 0.21
rpoC 765982 c.2613C>T synonymous_variant 0.21
rpoC 765991 c.2622C>G synonymous_variant 0.2
rpoC 765994 c.2625A>T synonymous_variant 0.18
rpoC 766000 c.2631G>C synonymous_variant 0.17
rpoC 766003 c.2634G>C synonymous_variant 0.17
rpoC 766009 c.2640G>C synonymous_variant 0.18
rpoC 766294 c.2925C>T synonymous_variant 0.16
rpoC 766297 c.2928G>C synonymous_variant 0.16
rpoC 766309 c.2940G>C synonymous_variant 0.2
rpoC 766312 c.2943T>C synonymous_variant 0.19
rpoC 766315 c.2946C>G synonymous_variant 0.21
rpoC 766348 c.2979A>G synonymous_variant 0.25
rpoC 766351 c.2982C>G synonymous_variant 0.24
rpoC 766363 c.2994G>C synonymous_variant 0.22
rpoC 766381 c.3012C>T synonymous_variant 0.23
rpoC 766384 c.3015A>G synonymous_variant 0.22
rpoC 766390 c.3021C>T synonymous_variant 0.23
rpoC 766393 c.3024C>T synonymous_variant 0.23
rpoC 766408 c.3039C>T synonymous_variant 0.23
rpoC 766426 c.3057C>T synonymous_variant 0.2
rpoC 766435 p.Glu1022Asp missense_variant 0.23
rpoC 766456 c.3087C>G synonymous_variant 0.26
rpoC 766459 c.3090G>T synonymous_variant 0.24
rpoC 766483 c.3114G>C synonymous_variant 0.23
rpoC 766484 p.Val1039Ile missense_variant 0.23
rpoC 766492 c.3123T>C synonymous_variant 0.24
rpoC 766517 p.Thr1050Ala missense_variant 0.28
rpoC 766522 c.3153C>A synonymous_variant 0.29
rpoC 766528 c.3159T>G synonymous_variant 0.24
rpoC 766530 p.Arg1054Gln missense_variant 0.23
rpoC 766537 c.3168G>A synonymous_variant 0.25
rpoC 766540 p.Asp1057Glu missense_variant 0.27
rpoC 766547 p.Arg1060Lys missense_variant 0.3
rpoC 766564 c.3195C>G synonymous_variant 0.33
rpoC 766570 c.3201T>G synonymous_variant 0.29
rpoC 766573 c.3204T>G synonymous_variant 0.27
rpoC 766582 c.3213C>T synonymous_variant 0.28
rpoC 766585 c.3216T>C synonymous_variant 0.3
rpoC 766607 p.Ile1080Leu missense_variant 0.21
rpoC 766610 p.Ser1081Pro missense_variant 0.21
rpoC 766618 c.3249G>T synonymous_variant 0.26
rpoC 766630 c.3261G>C synonymous_variant 0.26
rpoC 766645 c.3276A>G synonymous_variant 0.28
rpoC 766651 c.3282T>C synonymous_variant 0.27
rpoC 766654 c.3285C>G synonymous_variant 0.24
rpoC 766657 c.3288A>G synonymous_variant 0.23
rpoC 766661 p.Val1098Leu missense_variant 0.23
rpoC 766666 c.3297C>G synonymous_variant 0.23
rpoC 766672 c.3303T>C synonymous_variant 0.26
rpoC 766690 c.3321G>T synonymous_variant 0.25
rpoC 766702 c.3333G>C synonymous_variant 0.24
rpoC 766708 c.3339A>G synonymous_variant 0.21
rpoC 766726 c.3357T>C synonymous_variant 0.18
rpoC 766738 c.3369G>T synonymous_variant 0.22
rpoC 766750 c.3381C>G synonymous_variant 0.26
rpoC 766765 c.3396A>C synonymous_variant 0.29
rpoC 766774 c.3405T>C synonymous_variant 0.29
rpoC 766775 p.Arg1136Asn missense_variant 0.28
rpoC 766787 p.Glu1140Gln missense_variant 0.34
rpoC 766798 c.3429C>G synonymous_variant 0.34
rpoC 766804 c.3435A>G synonymous_variant 0.36
rpoC 766843 c.3474T>C synonymous_variant 0.31
rpoC 766846 c.3477C>G synonymous_variant 0.3
rpoC 766858 c.3489C>G synonymous_variant 0.21
rpoC 767002 c.3633G>C synonymous_variant 0.16
rpoC 767041 c.3672G>C synonymous_variant 0.23
rpoC 767044 c.3675G>C synonymous_variant 0.23
rpoC 767059 c.3690T>C synonymous_variant 0.26
rpoC 767098 c.3729T>C synonymous_variant 0.21
rpoC 767104 c.3735C>G synonymous_variant 0.18
rpoC 767105 p.Asn1246Gln missense_variant 0.19
rpoC 767110 c.3741T>C synonymous_variant 0.19
rpoC 767119 c.3750A>G synonymous_variant 0.2
rpoC 767134 c.3765C>A synonymous_variant 0.2
rpoC 767152 c.3783T>C synonymous_variant 0.16
rpoC 767158 c.3789T>C synonymous_variant 0.14
rpoC 767167 c.3798C>G synonymous_variant 0.21
rpoC 767182 c.3813G>C synonymous_variant 0.25
rpoC 767197 c.3828G>A synonymous_variant 0.23
rpoC 767206 c.3837C>G synonymous_variant 0.21
rpoC 767209 c.3840T>C synonymous_variant 0.21
rpoC 767212 c.3843G>T synonymous_variant 0.23
rpoC 767221 c.3852C>G synonymous_variant 0.24
rpoC 767230 c.3861G>C synonymous_variant 0.23
rpoC 767233 c.3864T>C synonymous_variant 0.24
rpoC 767263 c.3894T>C synonymous_variant 0.16
rpoC 767266 c.3897G>C synonymous_variant 0.13
mmpL5 775639 p.Ile948Val missense_variant 1.0
rpsL 781395 c.-165T>C upstream_gene_variant 1.0
rpsL 781628 c.69T>C synonymous_variant 0.14
rpsL 781649 c.90T>A synonymous_variant 0.15
rpsL 781655 c.96T>C synonymous_variant 0.14
rpsL 781658 c.99A>G synonymous_variant 0.14
rpsL 781682 c.123T>C synonymous_variant 0.15
rpsL 781709 c.150G>C synonymous_variant 0.14
rpsL 781772 c.213C>T synonymous_variant 0.14
rpsL 781808 c.249C>T synonymous_variant 0.22
rpsL 781811 c.252C>T synonymous_variant 0.22
rpsL 781814 c.255C>T synonymous_variant 0.24
rpsL 781817 c.258G>T synonymous_variant 0.25
rpsL 781832 c.273T>G synonymous_variant 0.27
rpsL 781859 c.300T>C synonymous_variant 0.28
rpsL 781868 c.309T>C synonymous_variant 0.26
rpsL 781871 c.312G>C synonymous_variant 0.26
rpsL 781877 c.318T>A synonymous_variant 0.25
rpsL 781892 c.333A>G synonymous_variant 0.29
rpsL 781898 c.339A>C synonymous_variant 0.29
rpsL 781907 c.348T>C synonymous_variant 0.29
rpsL 781916 c.357T>G synonymous_variant 0.33
rpsL 781929 p.Gly124Ser missense_variant 0.34
rpsL 781933 c.374G>A splice_region_variant&stop_retained_variant 0.35
rplC 800645 c.-164C>G upstream_gene_variant 0.25
rplC 800648 c.-161A>C upstream_gene_variant 0.27
rplC 800654 c.-155T>C upstream_gene_variant 0.28
rplC 800693 c.-116A>C upstream_gene_variant 0.4
rplC 800715 c.-94A>C upstream_gene_variant 0.39
rplC 800744 c.-65G>C upstream_gene_variant 0.26
rplC 800745 c.-64_-62delCTCinsTTG upstream_gene_variant 0.25
rplC 800759 c.-50C>T upstream_gene_variant 0.22
rplC 800762 c.-47T>G upstream_gene_variant 0.2
fbiC 1303536 c.606G>A synonymous_variant 0.16
fbiC 1303539 c.609G>A synonymous_variant 0.18
fbiC 1303545 c.615A>G synonymous_variant 0.16
fbiC 1303575 c.645G>C synonymous_variant 0.22
fbiC 1303581 c.651G>C synonymous_variant 0.22
fbiC 1303587 c.657G>T synonymous_variant 0.2
fbiC 1303590 c.660A>G synonymous_variant 0.18
fbiC 1303593 c.663G>A synonymous_variant 0.18
fbiC 1303602 c.672A>G synonymous_variant 0.16
fbiC 1304553 c.1623C>T synonymous_variant 0.15
fbiC 1304559 p.Glu543Asp missense_variant 0.17
fbiC 1304567 p.Phe546Tyr missense_variant 0.19
fbiC 1304580 c.1650T>C synonymous_variant 0.25
fbiC 1304608 p.Thr560Val missense_variant 0.21
fbiC 1304613 c.1683T>C synonymous_variant 0.19
fbiC 1304640 c.1710A>C synonymous_variant 0.15
fbiC 1304646 c.1716T>G synonymous_variant 0.14
rrs 1471659 n.-187C>T upstream_gene_variant 1.0
rrs 1471923 n.78T>C non_coding_transcript_exon_variant 0.38
rrs 1471925 n.80T>C non_coding_transcript_exon_variant 0.39
rrs 1471932 n.87A>G non_coding_transcript_exon_variant 0.39
rrs 1471934 n.89A>G non_coding_transcript_exon_variant 0.4
rrs 1471986 n.141C>T non_coding_transcript_exon_variant 0.31
rrs 1472019 n.174G>A non_coding_transcript_exon_variant 0.27
rrs 1472028 n.183A>G non_coding_transcript_exon_variant 0.26
rrs 1472030 n.185G>A non_coding_transcript_exon_variant 0.24
rrs 1472031 n.186G>T non_coding_transcript_exon_variant 0.24
rrs 1472033 n.188A>C non_coding_transcript_exon_variant 0.24
rrs 1472040 n.195T>G non_coding_transcript_exon_variant 0.24
rrs 1472041 n.196C>T non_coding_transcript_exon_variant 0.24
rrs 1472042 n.197T>G non_coding_transcript_exon_variant 0.23
rrs 1472053 n.211_212delGC non_coding_transcript_exon_variant 0.35
rrs 1472061 n.216A>T non_coding_transcript_exon_variant 0.39
rrs 1472075 n.230A>G non_coding_transcript_exon_variant 0.42
rrs 1472106 n.261G>A non_coding_transcript_exon_variant 0.4
rrs 1472108 n.263C>T non_coding_transcript_exon_variant 0.41
rrs 1472286 n.441C>G non_coding_transcript_exon_variant 0.21
rrs 1472287 n.442C>T non_coding_transcript_exon_variant 0.2
rrs 1472292 n.447A>G non_coding_transcript_exon_variant 0.2
rrs 1472298 n.453G>C non_coding_transcript_exon_variant 0.19
rrs 1472314 n.469A>G non_coding_transcript_exon_variant 0.18
rrs 1472315 n.470T>G non_coding_transcript_exon_variant 0.18
rrs 1472327 n.482G>A non_coding_transcript_exon_variant 0.24
rrs 1472328 n.483G>C non_coding_transcript_exon_variant 0.24
rrs 1472431 n.586G>A non_coding_transcript_exon_variant 0.57
rrs 1472438 n.593T>C non_coding_transcript_exon_variant 0.57
rrs 1472446 n.601T>A non_coding_transcript_exon_variant 0.56
rrs 1472452 n.607G>A non_coding_transcript_exon_variant 0.58
rrs 1472464 n.619A>G non_coding_transcript_exon_variant 0.58
rrs 1472489 n.644A>G non_coding_transcript_exon_variant 0.66
rrs 1472498 n.653C>T non_coding_transcript_exon_variant 0.65
rrs 1472683 n.838_839insTA non_coding_transcript_exon_variant 0.53
rrs 1472847 n.1002G>C non_coding_transcript_exon_variant 0.47
rrs 1472848 n.1003T>G non_coding_transcript_exon_variant 0.47
rrs 1472849 n.1004C>G non_coding_transcript_exon_variant 0.46
rrs 1472858 n.1013G>T non_coding_transcript_exon_variant 0.47
rrs 1472859 n.1014G>C non_coding_transcript_exon_variant 0.47
rrs 1472860 n.1015C>G non_coding_transcript_exon_variant 0.46
rrs 1472973 n.1128A>T non_coding_transcript_exon_variant 0.59
rrs 1473100 n.1255G>C non_coding_transcript_exon_variant 0.51
rrs 1473104 n.1259C>T non_coding_transcript_exon_variant 0.51
rrs 1473109 n.1264T>G non_coding_transcript_exon_variant 0.43
rrs 1473111 n.1266A>T non_coding_transcript_exon_variant 0.45
rrs 1473123 n.1278A>T non_coding_transcript_exon_variant 0.45
rrs 1473145 n.1300C>T non_coding_transcript_exon_variant 0.5
rrs 1473166 n.1321G>A non_coding_transcript_exon_variant 0.52
rrs 1473276 n.1431A>G non_coding_transcript_exon_variant 0.47
rrs 1473290 n.1445C>T non_coding_transcript_exon_variant 0.48
rrs 1473291 n.1446_1447insT non_coding_transcript_exon_variant 0.48
rrs 1473301 n.1456T>C non_coding_transcript_exon_variant 0.49
rrl 1473668 n.11C>T non_coding_transcript_exon_variant 0.16
rrl 1473717 n.60G>A non_coding_transcript_exon_variant 0.45
rrl 1473746 n.89T>C non_coding_transcript_exon_variant 0.52
rrl 1473770 n.113T>G non_coding_transcript_exon_variant 0.4
rrl 1473788 n.131A>G non_coding_transcript_exon_variant 0.27
rrl 1473876 n.219G>A non_coding_transcript_exon_variant 0.27
rrl 1473898 n.241C>T non_coding_transcript_exon_variant 0.37
rrl 1473899 n.242A>G non_coding_transcript_exon_variant 0.37
rrl 1473916 n.259C>A non_coding_transcript_exon_variant 0.43
rrl 1473922 n.265A>G non_coding_transcript_exon_variant 0.38
rrl 1473923 n.266C>G non_coding_transcript_exon_variant 0.38
rrl 1473924 n.267_268insT non_coding_transcript_exon_variant 0.4
rrl 1473935 n.278C>T non_coding_transcript_exon_variant 0.38
rrl 1473937 n.280C>T non_coding_transcript_exon_variant 0.38
rrl 1473943 n.286G>T non_coding_transcript_exon_variant 0.38
rrl 1473945 n.288T>A non_coding_transcript_exon_variant 0.38
rrl 1473946 n.289A>T non_coding_transcript_exon_variant 0.38
rrl 1474045 n.388C>T non_coding_transcript_exon_variant 0.25
rrl 1474054 n.397T>C non_coding_transcript_exon_variant 0.33
rrl 1474083 n.426C>T non_coding_transcript_exon_variant 0.34
rrl 1474093 n.436G>A non_coding_transcript_exon_variant 0.35
rrl 1474100 n.443C>T non_coding_transcript_exon_variant 0.33
rrl 1474103 n.446A>T non_coding_transcript_exon_variant 0.33
rrl 1474106 n.449A>G non_coding_transcript_exon_variant 0.35
rrl 1474107 n.450T>A non_coding_transcript_exon_variant 0.34
rrl 1474108 n.451C>T non_coding_transcript_exon_variant 0.35
rrl 1474109 n.452A>G non_coding_transcript_exon_variant 0.34
rrl 1474110 n.453A>T non_coding_transcript_exon_variant 0.33
rrl 1474140 n.483C>T non_coding_transcript_exon_variant 0.48
rrl 1474151 n.494C>T non_coding_transcript_exon_variant 0.43
rrl 1474174 n.517A>G non_coding_transcript_exon_variant 0.55
rrl 1474181 n.524C>A non_coding_transcript_exon_variant 0.58
rrl 1474249 n.592G>T non_coding_transcript_exon_variant 0.51
rrl 1474263 n.606G>A non_coding_transcript_exon_variant 0.43
rrl 1474284 n.629dupC non_coding_transcript_exon_variant 0.17
rrl 1474290 n.633T>C non_coding_transcript_exon_variant 0.14
rrl 1474292 n.636_644delTCCTCTCCG non_coding_transcript_exon_variant 0.16
rrl 1474303 n.646A>T non_coding_transcript_exon_variant 0.14
rrl 1474308 n.653_654delTG non_coding_transcript_exon_variant 0.13
rrl 1474350 n.693G>C non_coding_transcript_exon_variant 0.33
rrl 1474351 n.694G>C non_coding_transcript_exon_variant 0.33
rrl 1474353 n.696A>G non_coding_transcript_exon_variant 0.32
rrl 1474356 n.699T>C non_coding_transcript_exon_variant 0.31
rrl 1474362 n.705A>G non_coding_transcript_exon_variant 0.32
rrl 1474452 n.795C>G non_coding_transcript_exon_variant 0.25
rrl 1474552 n.895C>T non_coding_transcript_exon_variant 0.66
rrl 1474632 n.975G>T non_coding_transcript_exon_variant 0.52
rrl 1474636 n.979A>T non_coding_transcript_exon_variant 0.5
rrl 1474638 n.981C>A non_coding_transcript_exon_variant 0.49
rrl 1474639 n.982G>C non_coding_transcript_exon_variant 0.49
rrl 1474708 n.1052dupG non_coding_transcript_exon_variant 0.48
rrl 1474711 n.1054_1055insA non_coding_transcript_exon_variant 0.48
rrl 1474715 n.1061delA non_coding_transcript_exon_variant 0.52
rrl 1474753 n.1096A>G non_coding_transcript_exon_variant 0.52
rrl 1474760 n.1103A>G non_coding_transcript_exon_variant 0.51
rrl 1474794 n.1137C>A non_coding_transcript_exon_variant 0.54
rrl 1474812 n.1155G>A non_coding_transcript_exon_variant 0.65
rrl 1474830 n.1173A>T non_coding_transcript_exon_variant 0.62
rrl 1474831 n.1174A>T non_coding_transcript_exon_variant 0.62
rrl 1475031 n.1374G>T non_coding_transcript_exon_variant 0.26
rrl 1475061 n.1404C>T non_coding_transcript_exon_variant 0.44
rrl 1475062 n.1405A>G non_coding_transcript_exon_variant 0.44
rrl 1475120 n.1463G>T non_coding_transcript_exon_variant 0.6
rrl 1475209 n.1552G>A non_coding_transcript_exon_variant 0.43
rrl 1475213 n.1556C>T non_coding_transcript_exon_variant 0.43
rrl 1475221 n.1564C>T non_coding_transcript_exon_variant 0.37
rrl 1475315 n.1658A>T non_coding_transcript_exon_variant 0.21
rrl 1475355 n.1698C>T non_coding_transcript_exon_variant 0.21
rrl 1475369 n.1712G>C non_coding_transcript_exon_variant 0.14
rrl 1475375 n.1718G>A non_coding_transcript_exon_variant 0.14
rrl 1475378 n.1721A>T non_coding_transcript_exon_variant 0.14
rrl 1475379 n.1722G>C non_coding_transcript_exon_variant 0.14
rrl 1475380 n.1723C>A non_coding_transcript_exon_variant 0.14
rrl 1475419 n.1762C>T non_coding_transcript_exon_variant 0.2
rrl 1475429 n.1772G>A non_coding_transcript_exon_variant 0.3
rrl 1475433 n.1776A>C non_coding_transcript_exon_variant 0.35
rrl 1475452 n.1795C>A non_coding_transcript_exon_variant 0.43
rrl 1475460 n.1803A>G non_coding_transcript_exon_variant 0.47
rrl 1475505 n.1848G>A non_coding_transcript_exon_variant 0.59
rrl 1475526 n.1869C>A non_coding_transcript_exon_variant 0.53
rrl 1475544 n.1887A>T non_coding_transcript_exon_variant 0.47
rrl 1475573 n.1916G>A non_coding_transcript_exon_variant 0.37
rrl 1475659 n.2002G>A non_coding_transcript_exon_variant 0.18
rrl 1475753 n.2096C>G non_coding_transcript_exon_variant 0.55
rrl 1475762 n.2105G>T non_coding_transcript_exon_variant 0.5
rrl 1475763 n.2106C>T non_coding_transcript_exon_variant 0.5
rrl 1475764 n.2107A>C non_coding_transcript_exon_variant 0.51
rrl 1475765 n.2108A>G non_coding_transcript_exon_variant 0.52
rrl 1475775 n.2118G>T non_coding_transcript_exon_variant 0.62
rrl 1475916 n.2259C>T non_coding_transcript_exon_variant 0.59
rrl 1475975 n.2318C>T non_coding_transcript_exon_variant 0.54
rrl 1475977 n.2320A>G non_coding_transcript_exon_variant 0.54
rrl 1475995 n.2338G>A non_coding_transcript_exon_variant 0.54
rrl 1475997 n.2340A>G non_coding_transcript_exon_variant 0.54
rrl 1476033 n.2376T>C non_coding_transcript_exon_variant 0.39
rrl 1476034 n.2377C>G non_coding_transcript_exon_variant 0.39
rrl 1476035 n.2378G>C non_coding_transcript_exon_variant 0.38
rrl 1476044 n.2387T>G non_coding_transcript_exon_variant 0.4
rrl 1476045 n.2388G>T non_coding_transcript_exon_variant 0.4
rrl 1476049 n.2392C>T non_coding_transcript_exon_variant 0.41
rrl 1476086 n.2429G>A non_coding_transcript_exon_variant 0.51
rrl 1476088 n.2431A>C non_coding_transcript_exon_variant 0.48
rrl 1476095 n.2438C>T non_coding_transcript_exon_variant 0.51
rrl 1476103 n.2446C>A non_coding_transcript_exon_variant 0.49
rrl 1476108 n.2451T>G non_coding_transcript_exon_variant 0.48
rrl 1476110 n.2453G>T non_coding_transcript_exon_variant 0.49
rrl 1476115 n.2458T>C non_coding_transcript_exon_variant 0.49
rrl 1476131 n.2474C>T non_coding_transcript_exon_variant 0.51
rrl 1476214 n.2557G>T non_coding_transcript_exon_variant 0.45
rrl 1476215 n.2558C>T non_coding_transcript_exon_variant 0.45
rrl 1476224 n.2567A>G non_coding_transcript_exon_variant 0.48
rrl 1476245 n.2588C>T non_coding_transcript_exon_variant 0.49
rrl 1476246 n.2589G>A non_coding_transcript_exon_variant 0.52
rrl 1476252 n.2595T>G non_coding_transcript_exon_variant 0.52
rrl 1476256 n.2599A>C non_coding_transcript_exon_variant 0.53
rrl 1476262 n.2605G>A non_coding_transcript_exon_variant 0.56
rrl 1476281 n.2624T>C non_coding_transcript_exon_variant 0.58
rrl 1476529 n.2872A>T non_coding_transcript_exon_variant 0.67
rrl 1476583 n.2926G>A non_coding_transcript_exon_variant 0.6
rrl 1476584 n.2927C>T non_coding_transcript_exon_variant 0.6
rrl 1476594 n.2937C>T non_coding_transcript_exon_variant 0.59
rrl 1476597 n.2940G>A non_coding_transcript_exon_variant 0.58
rrl 1476603 n.2946G>A non_coding_transcript_exon_variant 0.59
rrl 1476608 n.2951C>G non_coding_transcript_exon_variant 0.59
rrl 1476619 n.2962C>T non_coding_transcript_exon_variant 0.59
rrl 1476628 n.2971T>A non_coding_transcript_exon_variant 0.55
rrl 1476665 n.3008T>A non_coding_transcript_exon_variant 0.4
rrl 1476674 n.3017T>C non_coding_transcript_exon_variant 0.35
rrl 1476679 n.3022T>A non_coding_transcript_exon_variant 0.32
rrl 1476689 n.3032A>T non_coding_transcript_exon_variant 0.23
rrl 1476690 n.3033C>T non_coding_transcript_exon_variant 0.22
rrl 1476693 n.3036G>A non_coding_transcript_exon_variant 0.22
rrl 1476695 n.3038T>A non_coding_transcript_exon_variant 0.23
inhA 1673541 c.-661G>C upstream_gene_variant 0.17
inhA 1673547 c.-655T>C upstream_gene_variant 0.17
inhA 1673556 c.-646C>A upstream_gene_variant 0.15
inhA 1673568 c.-634C>G upstream_gene_variant 0.13
inhA 1674353 p.Thr51Ile missense_variant 0.14
inhA 1674368 p.Ala56Glu missense_variant 0.18
inhA 1674370 p.Lys57Pro missense_variant 0.19
inhA 1674375 c.174C>G synonymous_variant 0.2
inhA 1674399 c.198A>G synonymous_variant 0.21
inhA 1674403 p.Glu68Asn missense_variant 0.21
inhA 1674414 c.213G>C synonymous_variant 0.2
inhA 1674416 p.Ala72Asp missense_variant 0.2
inhA 1674419 p.Ser73Thr missense_variant 0.19
inhA 1674421 c.220T>C synonymous_variant 0.2
inhA 1674428 p.Gly76Asp missense_variant 0.21
inhA 1674435 c.234G>C synonymous_variant 0.25
inhA 1674443 p.Ala81Val missense_variant 0.25
inhA 1674450 c.249G>T synonymous_variant 0.19
inhA 1674452 p.Ala84Glu missense_variant 0.18
inhA 1674471 c.270G>T synonymous_variant 0.24
inhA 1674480 c.279T>C synonymous_variant 0.23
inhA 1674483 c.282G>C synonymous_variant 0.22
inhA 1674486 c.285T>C synonymous_variant 0.22
inhA 1674489 c.288G>C synonymous_variant 0.22
inhA 1674507 c.306G>C synonymous_variant 0.21
inhA 1674534 c.333G>C synonymous_variant 0.27
inhA 1674539 p.Tyr113Phe missense_variant 0.25
inhA 1674542 p.Ala114Glu missense_variant 0.25
inhA 1674546 c.345T>C synonymous_variant 0.28
inhA 1674550 p.Ser117Ala missense_variant 0.29
inhA 1674573 c.372G>C synonymous_variant 0.31
inhA 1674576 c.375T>C synonymous_variant 0.29
inhA 1674579 c.378G>C synonymous_variant 0.29
inhA 1674585 c.384T>C synonymous_variant 0.33
inhA 1674589 p.Met130Leu missense_variant 0.33
inhA 1674597 c.396G>A synonymous_variant 0.36
inhA 1674600 c.399G>C synonymous_variant 0.37
inhA 1674618 c.417C>T synonymous_variant 0.35
inhA 1674624 c.423A>C synonymous_variant 0.29
inhA 1674627 c.426T>C synonymous_variant 0.29
inhA 1674628 p.Ser143Gly missense_variant 0.29
inhA 1674654 c.453G>C synonymous_variant 0.3
inhA 1674656 p.Ser152Thr missense_variant 0.3
inhA 1674690 c.489C>G synonymous_variant 0.31
inhA 1674702 c.501G>A synonymous_variant 0.26
inhA 1674703 c.502T>C synonymous_variant 0.25
inhA 1674714 c.513C>G synonymous_variant 0.29
inhA 1674718 c.517A>C synonymous_variant 0.29
inhA 1674729 c.528G>A synonymous_variant 0.32
inhA 1674745 p.Tyr182Val missense_variant 0.27
inhA 1674756 c.555T>G synonymous_variant 0.27
inhA 1674765 c.564C>G synonymous_variant 0.23
inhA 1674774 c.573A>C synonymous_variant 0.21
inhA 1674777 c.576C>G synonymous_variant 0.22
inhA 1674780 c.579T>G synonymous_variant 0.23
inhA 1674801 c.600T>C synonymous_variant 0.22
inhA 1674810 c.609C>G synonymous_variant 0.22
inhA 1674819 c.618G>C synonymous_variant 0.2
inhA 1674825 c.624C>T synonymous_variant 0.16
inhA 1674830 p.Glu210Gly missense_variant 0.15
inhA 1674839 p.Ala213Glu missense_variant 0.13
inhA 1674848 p.Gln216Arg missense_variant 0.15
inhA 1674870 c.669T>C synonymous_variant 0.16
inhA 1674876 c.675C>G synonymous_variant 0.15
rpsA 1833547 c.6G>A synonymous_variant 0.13
rpsA 1833589 c.48A>C synonymous_variant 0.24
rpsA 1833595 c.54T>G synonymous_variant 0.2
rpsA 1833596 p.Ser19Ala missense_variant 0.19
rpsA 1833616 c.75A>C synonymous_variant 0.22
rpsA 1833619 c.78A>C synonymous_variant 0.24
rpsA 1833625 c.84A>G synonymous_variant 0.25
rpsA 1833628 c.87G>C synonymous_variant 0.26
rpsA 1833664 c.123C>G synonymous_variant 0.34
rpsA 1833667 c.126C>G synonymous_variant 0.35
rpsA 1833676 c.135A>G synonymous_variant 0.37
rpsA 1833679 c.138G>T synonymous_variant 0.39
rpsA 1833694 c.153G>C synonymous_variant 0.4
rpsA 1833697 c.156C>G synonymous_variant 0.4
rpsA 1833709 c.168C>T synonymous_variant 0.44
rpsA 1833724 c.183C>T synonymous_variant 0.44
rpsA 1833727 c.186G>C synonymous_variant 0.43
rpsA 1833734 p.Ala65Ser missense_variant 0.46
rpsA 1833770 p.Asn77His missense_variant 0.43
rpsA 1833778 c.237C>G synonymous_variant 0.36
rpsA 1833781 c.240T>G synonymous_variant 0.36
rpsA 1833802 c.261A>G synonymous_variant 0.32
rpsA 1833805 c.264C>T synonymous_variant 0.32
rpsA 1833811 c.270G>C synonymous_variant 0.31
rpsA 1833814 c.273C>G synonymous_variant 0.3
rpsA 1833820 c.279G>A synonymous_variant 0.37
rpsA 1833835 c.294C>T synonymous_variant 0.35
rpsA 1833838 c.297G>C synonymous_variant 0.34
rpsA 1833841 c.300C>G synonymous_variant 0.33
rpsA 1833847 c.306C>G synonymous_variant 0.35
rpsA 1833856 c.315A>G synonymous_variant 0.36
rpsA 1833862 c.321G>C synonymous_variant 0.38
rpsA 1833874 c.333T>C synonymous_variant 0.36
rpsA 1833892 c.351G>A synonymous_variant 0.36
rpsA 1833894 p.Ala118Glu missense_variant 0.38
rpsA 1833928 c.387G>C synonymous_variant 0.4
rpsA 1833949 c.408T>C synonymous_variant 0.44
rpsA 1833958 c.417C>T synonymous_variant 0.39
rpsA 1833979 c.438T>C synonymous_variant 0.42
rpsA 1833988 c.447C>G synonymous_variant 0.41
rpsA 1834015 c.474G>C synonymous_variant 0.39
rpsA 1834042 c.501G>A synonymous_variant 0.43
rpsA 1834051 c.510G>A synonymous_variant 0.42
rpsA 1834099 c.558C>G synonymous_variant 0.3
rpsA 1834222 c.681T>C synonymous_variant 0.21
rpsA 1834225 c.684C>G synonymous_variant 0.23
rpsA 1834231 c.690T>C synonymous_variant 0.25
rpsA 1834240 c.699T>C synonymous_variant 0.27
rpsA 1834249 c.708T>C synonymous_variant 0.29
rpsA 1834261 c.720A>G synonymous_variant 0.3
rpsA 1834264 c.723G>C synonymous_variant 0.32
rpsA 1834294 c.753G>C synonymous_variant 0.31
rpsA 1834297 c.756C>T synonymous_variant 0.31
rpsA 1834303 c.762T>G synonymous_variant 0.31
rpsA 1834306 c.765T>C synonymous_variant 0.31
rpsA 1834348 c.807T>C synonymous_variant 0.28
rpsA 1834361 c.820T>C synonymous_variant 0.3
rpsA 1834366 c.825A>G synonymous_variant 0.29
rpsA 1834375 c.834G>C synonymous_variant 0.3
rpsA 1834396 c.855G>C synonymous_variant 0.26
rpsA 1834408 c.867C>T synonymous_variant 0.25
rpsA 1834411 c.870T>C synonymous_variant 0.24
rpsA 1834423 c.882G>C synonymous_variant 0.23
rpsA 1834432 c.891G>T synonymous_variant 0.27
rpsA 1834451 c.910T>C synonymous_variant 0.27
rpsA 1834456 c.915T>G synonymous_variant 0.29
rpsA 1834468 c.927A>G synonymous_variant 0.28
rpsA 1834477 c.936C>T synonymous_variant 0.29
rpsA 1834489 c.948T>C synonymous_variant 0.32
rpsA 1834498 c.957C>T synonymous_variant 0.36
rpsA 1834522 c.981C>T synonymous_variant 0.37
rpsA 1834527 p.Arg329His missense_variant 0.32
rpsA 1834540 c.999G>C synonymous_variant 0.31
rpsA 1834543 c.1002C>G synonymous_variant 0.32
rpsA 1834546 c.1005T>C synonymous_variant 0.31
rpsA 1834555 c.1014T>C synonymous_variant 0.31
rpsA 1834558 c.1017C>G synonymous_variant 0.29
rpsA 1834573 c.1032G>C synonymous_variant 0.34
rpsA 1834603 p.Glu354Asp missense_variant 0.29
rpsA 1834606 c.1065C>T synonymous_variant 0.27
rpsA 1834609 c.1068T>C synonymous_variant 0.27
rpsA 1834619 c.1078T>C synonymous_variant 0.25
rpsA 1834622 c.1081_1083delTCGinsAGC synonymous_variant 0.26
rpsA 1834633 c.1092A>G synonymous_variant 0.32
rpsA 1834639 c.1098T>C synonymous_variant 0.34
rpsA 1834666 c.1125G>C synonymous_variant 0.25
rpsA 1834667 p.Ala376Ser missense_variant 0.25
rpsA 1834690 c.1149T>C synonymous_variant 0.26
rpsA 1834732 c.1191T>C synonymous_variant 0.22
rpsA 1834738 c.1197A>G synonymous_variant 0.2
rpsA 1834747 c.1206A>G synonymous_variant 0.18
rpsA 1834751 p.Leu404Ile missense_variant 0.18
rpsA 1834756 c.1215G>A synonymous_variant 0.18
rpsA 1834759 c.1218A>T synonymous_variant 0.2
rpsA 1834765 p.Glu408Asp missense_variant 0.25
rpsA 1834775 p.Ala412Thr missense_variant 0.25
rpsA 1834780 c.1239A>G synonymous_variant 0.25
rpsA 1834786 c.1245A>G synonymous_variant 0.27
rpsA 1834789 c.1248T>C synonymous_variant 0.27
rpsA 1834792 c.1251G>C synonymous_variant 0.27
tlyA 1917972 c.33A>G synonymous_variant 1.0
ndh 2102653 p.His130Gln missense_variant 0.17
PPE35 2170568 p.Ile15Met missense_variant 1.0
Rv1979c 2223293 c.-129A>G upstream_gene_variant 1.0
kasA 2517917 c.-198G>T upstream_gene_variant 0.32
kasA 2517926 c.-189G>A upstream_gene_variant 0.29
kasA 2517941 c.-174C>G upstream_gene_variant 0.29
kasA 2517950 c.-165C>G upstream_gene_variant 0.3
kasA 2517989 c.-126T>G upstream_gene_variant 0.2
kasA 2517992 c.-123C>T upstream_gene_variant 0.2
kasA 2517995 c.-120C>T upstream_gene_variant 0.2
kasA 2518528 c.414C>G synonymous_variant 0.15
kasA 2518555 c.441C>G synonymous_variant 0.17
kasA 2518561 c.447T>G synonymous_variant 0.17
kasA 2518567 c.453G>C synonymous_variant 0.16
kasA 2518588 c.474T>C synonymous_variant 0.14
kasA 2518591 c.477G>C synonymous_variant 0.14
kasA 2518606 c.492G>C synonymous_variant 0.16
kasA 2518609 p.Met165Ile missense_variant 0.17
kasA 2518651 c.537C>G synonymous_variant 0.14
kasA 2518663 c.549T>G synonymous_variant 0.18
kasA 2518684 c.570C>G synonymous_variant 0.23
kasA 2518688 p.Val192Phe missense_variant 0.22
kasA 2518693 c.579C>G synonymous_variant 0.22
kasA 2518714 c.600A>C synonymous_variant 0.19
kasA 2518715 p.Pro201Gly missense_variant 0.19
kasA 2518726 c.612G>C synonymous_variant 0.21
kasA 2518732 c.618C>G synonymous_variant 0.21
kasA 2518738 c.624G>C synonymous_variant 0.21
kasA 2518739 p.Ala209Thr missense_variant 0.21
kasA 2518747 c.633C>G synonymous_variant 0.22
kasA 2518768 c.654C>T synonymous_variant 0.22
kasA 2518780 p.Glu222Asp missense_variant 0.15
kasA 2518783 c.669T>C synonymous_variant 0.14
kasA 2518795 c.681C>G synonymous_variant 0.13
folC 2747002 c.597T>C synonymous_variant 0.15
folC 2747014 c.585C>T synonymous_variant 0.16
folC 2747023 c.576C>G synonymous_variant 0.15
folC 2747036 p.Asn188Thr missense_variant 0.13
Rv2752c 3065610 p.Thr194Lys missense_variant 0.15
Rv2752c 3065619 c.573C>G synonymous_variant 0.19
Rv2752c 3065622 c.570G>C synonymous_variant 0.2
Rv2752c 3065634 c.558G>C synonymous_variant 0.2
Rv2752c 3065637 c.555A>G synonymous_variant 0.2
Rv2752c 3065640 c.552T>C synonymous_variant 0.2
Rv2752c 3065649 c.543T>C synonymous_variant 0.21
Rv2752c 3065652 c.540C>G synonymous_variant 0.2
Rv2752c 3065661 c.531A>C synonymous_variant 0.17
Rv2752c 3065675 p.Phe173Leu missense_variant 0.16
Rv2752c 3066054 c.138T>C synonymous_variant 0.12
Rv2752c 3066071 c.121T>C synonymous_variant 0.14
Rv2752c 3066075 c.117A>G synonymous_variant 0.15
Rv2752c 3066081 c.111G>C synonymous_variant 0.15
Rv2752c 3066087 c.105A>G synonymous_variant 0.16
Rv2752c 3066096 c.96G>C synonymous_variant 0.15
thyX 3067373 c.573C>G synonymous_variant 0.15
thyX 3067388 c.558C>G synonymous_variant 0.16
thyX 3067406 c.540A>G synonymous_variant 0.18
thyX 3067427 c.519G>C synonymous_variant 0.15
thyX 3067430 c.516C>T synonymous_variant 0.15
thyX 3067847 c.99C>G synonymous_variant 0.14
thyX 3067850 c.96A>C synonymous_variant 0.14
thyX 3067869 p.Thr26Ser missense_variant 0.15
thyX 3067874 c.72C>G synonymous_variant 0.15
thyX 3067883 c.63C>G synonymous_variant 0.14
thyX 3067886 c.60A>G synonymous_variant 0.15
thyX 3067889 c.57C>A synonymous_variant 0.14
thyX 3067892 p.Leu18Ile missense_variant 0.14
thyX 3067910 c.36C>T synonymous_variant 0.15
thyA 3073845 c.627C>T synonymous_variant 0.18
thyA 3073863 c.609T>C synonymous_variant 0.27
thyA 3073881 c.591C>A synonymous_variant 0.31
thyA 3073887 p.Ser195Gly missense_variant 0.29
thyA 3073892 c.580T>C synonymous_variant 0.29
thyA 3073893 c.579C>G synonymous_variant 0.28
thyA 3073905 c.567C>G synonymous_variant 0.32
thyA 3073925 c.547T>C synonymous_variant 0.35
thyA 3073929 c.543T>C synonymous_variant 0.32
thyA 3073956 c.516G>C synonymous_variant 0.14
thyA 3073959 c.513T>C synonymous_variant 0.16
thyA 3073962 c.510G>T synonymous_variant 0.16
fbiD 3339002 c.-116A>G upstream_gene_variant 1.0
Rv3083 3448472 c.-32A>G upstream_gene_variant 1.0
fprA 3473996 c.-11_-10insA upstream_gene_variant 1.0
fbiA 3640708 p.Leu56Val missense_variant 0.14
fbiB 3640713 c.-822T>C upstream_gene_variant 0.16
fbiA 3640714 p.Val58Ile missense_variant 0.16
fbiB 3640722 c.-813G>C upstream_gene_variant 0.19
fbiB 3640743 c.-792T>C upstream_gene_variant 0.16
fbiB 3640758 c.-777G>C upstream_gene_variant 0.16
rpoA 3877533 c.975C>T synonymous_variant 0.23
rpoA 3877548 c.960C>G synonymous_variant 0.3
rpoA 3877553 p.Glu319Gln missense_variant 0.31
rpoA 3877557 c.951C>G synonymous_variant 0.31
rpoA 3877569 p.Pro313Ala missense_variant 0.3
rpoA 3877587 c.921A>G synonymous_variant 0.33
rpoA 3877613 p.Ile299Val missense_variant 0.36
rpoA 3877617 c.891G>C synonymous_variant 0.34
rpoA 3877656 c.852T>C synonymous_variant 0.33
rpoA 3877662 c.846C>T synonymous_variant 0.3
rpoA 3877668 c.840A>G synonymous_variant 0.32
rpoA 3877677 c.831G>T synonymous_variant 0.3
rpoA 3877680 c.828G>C synonymous_variant 0.28
rpoA 3877686 c.822A>G synonymous_variant 0.27
rpoA 3877689 c.819C>G synonymous_variant 0.29
rpoA 3877692 c.816G>C synonymous_variant 0.28
rpoA 3877695 c.813C>G synonymous_variant 0.27
rpoA 3877704 c.804G>T synonymous_variant 0.26
rpoA 3877737 c.771G>C synonymous_variant 0.28
rpoA 3877743 c.765T>C synonymous_variant 0.27
rpoA 3877764 c.744C>G synonymous_variant 0.22
rpoA 3877770 c.738A>G synonymous_variant 0.26
rpoA 3877776 c.732T>C synonymous_variant 0.26
rpoA 3877782 c.726T>C synonymous_variant 0.26
rpoA 3877785 c.723C>G synonymous_variant 0.26
rpoA 3877788 c.720G>A synonymous_variant 0.25
rpoA 3877827 c.681C>G synonymous_variant 0.16
rpoA 3877836 c.672A>G synonymous_variant 0.15
rpoA 3877839 c.669G>T synonymous_variant 0.15
rpoA 3877842 c.666A>G synonymous_variant 0.16
rpoA 3877848 c.660C>T synonymous_variant 0.18
rpoA 3877856 c.652T>C synonymous_variant 0.14
rpoA 3877860 c.648C>G synonymous_variant 0.15
rpoA 3877866 c.642G>C synonymous_variant 0.15
rpoA 3877875 c.633T>C synonymous_variant 0.14
rpoA 3877881 c.627G>C synonymous_variant 0.21
rpoA 3877893 c.615C>G synonymous_variant 0.25
rpoA 3877905 c.603A>C synonymous_variant 0.27
rpoA 3877908 c.600T>C synonymous_variant 0.29
rpoA 3877929 p.Ile193Val missense_variant 0.31
rpoA 3877962 c.546G>T synonymous_variant 0.29
rpoA 3877971 p.Asp179Glu missense_variant 0.21
rpoA 3877974 c.534G>C synonymous_variant 0.21
rpoA 3877989 c.519A>G synonymous_variant 0.16
rpoA 3878143 p.Gly122Asp missense_variant 0.14
rpoA 3878157 c.351C>G synonymous_variant 0.18
rpoA 3878160 c.348C>G synonymous_variant 0.2
rpoA 3878166 c.342C>G synonymous_variant 0.31
rpoA 3878175 c.333G>T synonymous_variant 0.34
rpoA 3878184 c.324C>T synonymous_variant 0.35
rpoA 3878193 c.315T>C synonymous_variant 0.33
rpoA 3878197 p.Glu104Val missense_variant 0.33
rpoA 3878217 c.291A>G synonymous_variant 0.38
rpoA 3878244 c.264G>A synonymous_variant 0.29
rpoA 3878247 c.261G>C synonymous_variant 0.26
rpoA 3878253 c.255G>C synonymous_variant 0.24
rpoA 3878264 p.Ser82Gly missense_variant 0.22
rpoA 3878271 c.237T>C synonymous_variant 0.24
rpoA 3878276 c.232C>T synonymous_variant 0.23
rpoA 3878283 p.Glu75Asp missense_variant 0.24
rpoA 3878295 c.213A>G synonymous_variant 0.24
rpoA 3878298 c.210A>G synonymous_variant 0.24
rpoA 3878304 c.204G>C synonymous_variant 0.25
rpoA 3878310 c.198G>C synonymous_variant 0.25
rpoA 3878322 c.186A>G synonymous_variant 0.27
rpoA 3878331 c.177A>G synonymous_variant 0.28
rpoA 3878346 c.162T>C synonymous_variant 0.3
rpoA 3878358 c.150C>G synonymous_variant 0.27
rpoA 3878364 c.144A>C synonymous_variant 0.29
rpoA 3878370 c.138T>C synonymous_variant 0.3
rpoA 3878394 c.114G>T synonymous_variant 0.3
rpoA 3878400 c.108T>C synonymous_variant 0.27
rpoA 3878415 c.93C>T synonymous_variant 0.19
rpoA 3878575 c.-68C>T upstream_gene_variant 1.0
ddn 3986645 c.-199G>A upstream_gene_variant 0.25
clpC1 4038318 p.Pro796Leu missense_variant 0.96
clpC1 4038563 c.2142C>T synonymous_variant 0.18
clpC1 4038569 c.2136C>T synonymous_variant 0.16
clpC1 4038575 c.2130C>G synonymous_variant 0.2
clpC1 4038596 c.2109A>G synonymous_variant 0.2
clpC1 4038602 c.2103G>C synonymous_variant 0.2
clpC1 4038620 p.Gln695Leu missense_variant 0.22
clpC1 4038623 c.2082A>G synonymous_variant 0.22
clpC1 4038640 p.Asp689Asn missense_variant 0.24
clpC1 4038647 c.2058T>G synonymous_variant 0.23
clpC1 4038650 c.2055C>T synonymous_variant 0.21
clpC1 4038658 p.Lys683Gln missense_variant 0.2
clpC1 4038661 p.Ser682Thr missense_variant 0.18
clpC1 4038662 c.2043T>C synonymous_variant 0.18
clpC1 4038671 c.2034T>A synonymous_variant 0.21
clpC1 4038679 p.Pro676Ala missense_variant 0.2
clpC1 4038683 c.2022T>C synonymous_variant 0.22
clpC1 4038704 c.2001T>C synonymous_variant 0.23
clpC1 4038710 c.1995G>C synonymous_variant 0.21
clpC1 4038713 c.1992T>C synonymous_variant 0.2
clpC1 4038726 p.Thr660Cys missense_variant 0.22
clpC1 4038770 c.1935C>T synonymous_variant 0.27
clpC1 4038773 c.1932T>C synonymous_variant 0.27
clpC1 4038782 c.1923G>T synonymous_variant 0.29
clpC1 4038790 c.1915C>T synonymous_variant 0.29
clpC1 4038809 p.Gln632Ser missense_variant 0.24
clpC1 4038812 c.1893T>C synonymous_variant 0.23
clpC1 4038815 c.1890G>C synonymous_variant 0.24
clpC1 4038857 c.1848C>A synonymous_variant 0.16
clpC1 4038878 c.1827A>G synonymous_variant 0.32
clpC1 4038890 c.1815G>A synonymous_variant 0.27
clpC1 4038905 c.1800A>C synonymous_variant 0.27
clpC1 4038908 c.1797C>G synonymous_variant 0.24
clpC1 4038911 c.1794G>T synonymous_variant 0.25
clpC1 4038914 c.1791G>C synonymous_variant 0.23
clpC1 4038923 c.1782A>G synonymous_variant 0.22
clpC1 4038941 c.1764G>C synonymous_variant 0.21
clpC1 4038953 c.1752A>G synonymous_variant 0.18
clpC1 4038997 c.1708T>C synonymous_variant 0.17
clpC1 4039001 p.Asn568Glu missense_variant 0.15
clpC1 4039022 c.1683A>G synonymous_variant 0.19
clpC1 4039070 c.1635G>C synonymous_variant 0.24
clpC1 4039073 c.1632C>G synonymous_variant 0.22
clpC1 4039085 c.1620A>G synonymous_variant 0.18
clpC1 4039091 c.1614G>A synonymous_variant 0.16
clpC1 4039094 c.1611C>A synonymous_variant 0.15
clpC1 4039097 c.1608G>C synonymous_variant 0.15
clpC1 4039169 p.Glu512Asp missense_variant 0.16
clpC1 4039183 c.1522T>C synonymous_variant 0.21
clpC1 4039187 c.1518G>C synonymous_variant 0.22
clpC1 4039208 c.1497C>G synonymous_variant 0.2
clpC1 4039223 c.1482C>T synonymous_variant 0.16
clpC1 4039430 c.1275T>C synonymous_variant 0.14
clpC1 4039439 c.1266C>T synonymous_variant 0.16
clpC1 4039442 c.1263A>G synonymous_variant 0.17
clpC1 4039448 c.1257A>G synonymous_variant 0.16
clpC1 4039451 c.1254G>A synonymous_variant 0.16
clpC1 4039454 c.1251A>G synonymous_variant 0.15
clpC1 4039463 c.1242C>G synonymous_variant 0.2
clpC1 4039466 c.1239T>C synonymous_variant 0.2
clpC1 4039469 c.1236T>C synonymous_variant 0.22
clpC1 4039472 c.1233G>T synonymous_variant 0.21
clpC1 4039481 c.1224T>C synonymous_variant 0.22
clpC1 4039487 c.1218G>C synonymous_variant 0.22
clpC1 4039517 c.1188C>G synonymous_variant 0.25
clpC1 4039532 c.1173C>T synonymous_variant 0.22
clpC1 4039556 c.1149G>C synonymous_variant 0.28
clpC1 4039559 c.1146C>G synonymous_variant 0.28
clpC1 4039562 c.1143C>G synonymous_variant 0.29
clpC1 4039568 p.Met379Ile missense_variant 0.29
clpC1 4039576 p.Ala377Ser missense_variant 0.29
clpC1 4039577 c.1128T>C synonymous_variant 0.29
clpC1 4039581 p.Thr375Ser missense_variant 0.29
clpC1 4039589 c.1116G>T synonymous_variant 0.31
clpC1 4039601 c.1104G>C synonymous_variant 0.29
clpC1 4039604 c.1101G>A synonymous_variant 0.3
clpC1 4039610 c.1095G>C synonymous_variant 0.28
clpC1 4039616 c.1089G>C synonymous_variant 0.3
clpC1 4039652 c.1053G>C synonymous_variant 0.32
clpC1 4039655 c.1050G>C synonymous_variant 0.32
clpC1 4039664 c.1041G>C synonymous_variant 0.31
clpC1 4039682 c.1023C>G synonymous_variant 0.32
clpC1 4039694 c.1011G>A synonymous_variant 0.33
clpC1 4039724 c.981A>G synonymous_variant 0.31
clpC1 4039733 c.972G>T synonymous_variant 0.27
clpC1 4039736 c.969C>G synonymous_variant 0.26
clpC1 4039748 c.957G>C synonymous_variant 0.2
clpC1 4039751 c.954A>G synonymous_variant 0.21
clpC1 4039757 c.948A>G synonymous_variant 0.2
clpC1 4039766 c.939T>C synonymous_variant 0.2
clpC1 4039769 c.936C>G synonymous_variant 0.22
clpC1 4039778 c.927A>G synonymous_variant 0.25
clpC1 4039781 c.924G>C synonymous_variant 0.25
clpC1 4039793 c.912C>G synonymous_variant 0.26
clpC1 4039814 c.891C>G synonymous_variant 0.24
clpC1 4039817 c.888A>C synonymous_variant 0.24
clpC1 4039820 c.885T>C synonymous_variant 0.23
clpC1 4039826 c.879C>G synonymous_variant 0.26
clpC1 4039831 c.874T>C synonymous_variant 0.26
clpC1 4039850 c.855T>C synonymous_variant 0.31
clpC1 4039865 c.840T>C synonymous_variant 0.3
clpC1 4039889 c.816G>C synonymous_variant 0.29
clpC1 4039898 c.807C>G synonymous_variant 0.27
clpC1 4039904 c.801A>G synonymous_variant 0.31
clpC1 4039925 c.780C>T synonymous_variant 0.33
clpC1 4039931 c.774T>C synonymous_variant 0.33
clpC1 4039934 c.771G>C synonymous_variant 0.32
clpC1 4039946 c.759A>G synonymous_variant 0.33
clpC1 4039952 c.753T>C synonymous_variant 0.32
clpC1 4039957 c.748C>T synonymous_variant 0.31
clpC1 4039958 c.747G>C synonymous_variant 0.31
clpC1 4039979 c.726C>G synonymous_variant 0.33
clpC1 4039991 c.714G>C synonymous_variant 0.35
clpC1 4040001 p.His235Ala missense_variant 0.31
clpC1 4040021 c.684A>C synonymous_variant 0.31
clpC1 4040024 c.681A>G synonymous_variant 0.3
clpC1 4040030 c.675C>G synonymous_variant 0.29
clpC1 4040033 c.672G>T synonymous_variant 0.27
clpC1 4040036 c.669C>A synonymous_variant 0.28
clpC1 4040057 c.648C>T synonymous_variant 0.24
clpC1 4040063 c.642G>C synonymous_variant 0.18
clpC1 4040095 p.Leu204Phe missense_variant 0.14
clpC1 4040135 c.570C>G synonymous_variant 0.18
clpC1 4040144 c.561G>C synonymous_variant 0.16
clpC1 4040147 c.558A>G synonymous_variant 0.15
clpC1 4040153 c.552A>G synonymous_variant 0.18
clpC1 4040159 c.546G>C synonymous_variant 0.17
clpC1 4040162 c.543G>C synonymous_variant 0.15
clpC1 4040168 c.537G>C synonymous_variant 0.15
clpC1 4040171 c.534C>G synonymous_variant 0.17
clpC1 4040180 c.525C>G synonymous_variant 0.21
clpC1 4040200 c.505T>C synonymous_variant 0.16
clpC1 4040201 c.504C>G synonymous_variant 0.16
clpC1 4040204 c.501G>C synonymous_variant 0.16
clpC1 4040207 c.498T>C synonymous_variant 0.2
clpC1 4040213 c.492T>A synonymous_variant 0.23
clpC1 4040225 c.480A>T synonymous_variant 0.18
clpC1 4040228 c.477G>C synonymous_variant 0.18
clpC1 4040234 c.471C>A synonymous_variant 0.24
clpC1 4040237 c.468C>T synonymous_variant 0.26
clpC1 4040249 c.456A>G synonymous_variant 0.24
clpC1 4040257 p.Ala150Thr missense_variant 0.23
clpC1 4040267 c.438A>G synonymous_variant 0.2
clpC1 4040411 c.294T>C synonymous_variant 0.2
clpC1 4040423 c.282A>G synonymous_variant 0.22
clpC1 4040431 c.274T>C synonymous_variant 0.27
clpC1 4040441 c.264C>T synonymous_variant 0.27
clpC1 4040444 c.261C>A synonymous_variant 0.27
clpC1 4040450 c.255A>G synonymous_variant 0.27
clpC1 4040459 c.246C>G synonymous_variant 0.27
clpC1 4040465 c.240T>C synonymous_variant 0.28
clpC1 4040471 c.234T>C synonymous_variant 0.31
clpC1 4040480 c.225T>C synonymous_variant 0.32
clpC1 4040522 c.183T>C synonymous_variant 0.26
clpC1 4040531 c.174T>G synonymous_variant 0.21
clpC1 4040534 c.171A>G synonymous_variant 0.2
clpC1 4040539 c.166C>T synonymous_variant 0.19
clpC1 4040540 c.165G>T synonymous_variant 0.21
clpC1 4040546 c.159G>C synonymous_variant 0.21
clpC1 4040551 c.154T>C synonymous_variant 0.21
clpC1 4040561 c.144A>G synonymous_variant 0.2
clpC1 4040573 c.132T>C synonymous_variant 0.17
clpC1 4040585 c.120A>G synonymous_variant 0.15
clpC1 4040588 c.117T>C synonymous_variant 0.16
clpC1 4040618 c.87C>G synonymous_variant 0.14
clpC1 4040644 c.61A>C synonymous_variant 0.14
clpC1 4040654 c.51G>A synonymous_variant 0.13
embC 4240726 c.864G>C synonymous_variant 0.13
embC 4240736 c.874_875delTCinsAG synonymous_variant 0.16
embC 4240765 c.903C>G synonymous_variant 0.24
embC 4240768 c.906G>C synonymous_variant 0.24
embC 4240769 p.Val303Ile missense_variant 0.24
embC 4240780 c.918T>C synonymous_variant 0.28
embC 4240783 c.921G>C synonymous_variant 0.28
embC 4240789 c.927T>C synonymous_variant 0.28
embC 4240800 p.Tyr313Phe missense_variant 0.25
embC 4240819 c.957A>C synonymous_variant 0.16
embC 4240822 c.960C>G synonymous_variant 0.15
embC 4241017 c.1155T>C synonymous_variant 0.14
embC 4241024 p.Val388Phe missense_variant 0.14
embC 4241039 p.Asp393Asn missense_variant 0.2
embC 4241047 c.1185C>G synonymous_variant 0.18
embC 4241050 c.1188T>G synonymous_variant 0.18
embC 4241053 c.1191G>T synonymous_variant 0.19
embC 4241071 c.1209C>G synonymous_variant 0.23
embC 4241084 p.Leu408Ala missense_variant 0.23
embC 4241095 c.1233C>T synonymous_variant 0.22
embC 4241122 c.1260C>T synonymous_variant 0.24
embC 4241135 p.Val425Leu missense_variant 0.21
embC 4241140 c.1278A>G synonymous_variant 0.2
embC 4241141 p.Ile427Phe missense_variant 0.2
embC 4241158 c.1296T>C synonymous_variant 0.23
embC 4241161 c.1299C>G synonymous_variant 0.19
embC 4241162 p.Leu434Met missense_variant 0.19
embC 4241167 c.1305C>G synonymous_variant 0.19
embC 4241168 c.1306C>T synonymous_variant 0.19
embC 4241179 c.1317G>T synonymous_variant 0.2
embC 4241185 c.1323G>C synonymous_variant 0.18
embC 4241188 c.1326C>G synonymous_variant 0.19
embC 4241194 c.1332C>G synonymous_variant 0.2
embC 4241215 c.1353C>G synonymous_variant 0.17
embC 4241218 c.1356G>C synonymous_variant 0.15
embA 4242643 c.-590C>T upstream_gene_variant 1.0
embA 4243069 c.-164C>T upstream_gene_variant 1.0
embB 4247437 c.924A>G synonymous_variant 0.2
embB 4247440 c.927C>G synonymous_variant 0.19
embB 4247462 c.949_950delTCinsAG synonymous_variant 0.22
embB 4247470 c.957T>C synonymous_variant 0.2
embB 4247497 c.984T>C synonymous_variant 0.17
embB 4247500 c.987C>G synonymous_variant 0.16
embB 4247512 c.999T>C synonymous_variant 0.16
embB 4248157 c.1644A>G synonymous_variant 0.15
embB 4248173 p.Val554Met missense_variant 0.16
whiB6 4338595 c.-75delG upstream_gene_variant 1.0