EBG00000313339 - n.2096C>G
Drug resistance types
142 Sensitive
63 RR-TB
87 HR-TB
81 MDR-TB
52 Pre-XDR-TB
2 XDR-TB
339 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.6.2.2 | 5 |
| lineage6.2.3;lineage1.1.2 | 1 |
| La1.8.1 | 21 |
| lineage4.9 | 138 |
| 33 | |
| lineage4;lineage3.1 | 1 |
| lineage4 | 43 |
| lineage2.2.1 | 113 |
| lineage3 | 43 |
| lineage3.1.1 | 12 |
| La1.3 | 10 |
| La1.2 | 3 |
| lineage4.9;La1.3 | 2 |
| La1 | 1 |
| lineage2.2 | 7 |
| lineage3.1.2.1 | 3 |
| lineage2.2.2 | 8 |
| lineage4.8 | 36 |
| lineage4.4.2 | 8 |
| lineage4.3.2 | 5 |
| lineage4.1.2.1 | 33 |
| lineage4.4.1.2 | 4 |
| lineage5.1.1 | 2 |
| lineage2.2.1.1 | 10 |
| lineage4.5 | 4 |
| lineage4.3.4.2.1 | 8 |
| lineage4.9.1 | 1 |
| lineage4.1.1.2 | 3 |
| lineage4.6 | 1 |
| lineage4.1.1 | 9 |
| lineage1.2.2.2 | 3 |
| lineage4.3.1.1 | 2 |
| lineage4.8.2 | 1 |
| lineage4.1.1.3 | 11 |
| lineage4.7 | 8 |
| lineage6 | 4 |
| lineage4.3.3 | 24 |
| lineage4.3 | 3 |
| lineage4.4.1.1.1 | 3 |
| lineage4.8;lineage4.3.3 | 4 |
| lineage4.9;lineage2.2.1 | 1 |
| lineage4.3.2.1 | 8 |
| lineage4.4.1.1 | 11 |
| lineage4.2.2.2 | 4 |
| lineage4.8.1 | 2 |
| lineage2.2.1.2 | 2 |
| lineage4.1.2 | 12 |
| lineage4.9;lineage2.2 | 1 |
| lineage2 | 2 |
| lineage1.1.1 | 3 |
| lineage1.1.3.1 | 2 |
| La2 | 2 |
| lineage4.2.1 | 7 |
| lineage4.3.4.1 | 9 |
| La1.7.1 | 5 |
| lineage4.4.2;lineage4.2.2;lineage2.2.1 | 1 |
| lineage2.2.2;lineage2.2.1 | 1 |
| lineage4.2.2 | 1 |
| lineage3.1.3 | 3 |
| lineage3.1.2 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage4.3.4.2 | 8 |
| lineage1.2.1.2 | 2 |
| lineage4.9;lineage3.1.1 | 1 |
| lineage4.4.1 | 1 |
| lineage1.1.2 | 4 |
| La1.2.BCG | 1 |
| lineage4.8;lineage4.2.1.1 | 1 |
| lineage3.1 | 3 |
| lineage6.2.3 | 1 |
| lineage4.2 | 1 |
| lineage4;lineage2 | 1 |
| lineage4.1 | 1 |
| lineage4.1.1.3.1 | 4 |
| lineage4;lineage3 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage1.2.2 | 1 |
| lineage4.4 | 3 |
| lineage6.1.3 | 1 |
| lineage4.9;lineage4.2.1 | 1 |
| lineage3.1.2.2 | 4 |
| lineage4.2.2.2;lineage3 | 1 |
| lineage4.2.1.1 | 3 |
| lineage1.1.3.3 | 1 |
| lineage4.9;lineage3 | 1 |
| lineage1.1.1.1 | 2 |
| lineage4.6.5 | 1 |
| lineage4.1.2.1;lineage2.2.1 | 1 |
| lineage6.3.1 | 1 |
| lineage4.9;lineage1.1 | 1 |
| lineage4.9;lineage4.1 | 1 |
| lineage4.9;lineage4.3.4 | 1 |
| lineage4.3.4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 766 |
Geographic prevalence
Country level data for this variant is available for 8 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3324325 | MDR-TB | lineage4.6.2.2 | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR3439225 | Other | La1.8.1 | None | ERR3439229 | Other | La1.8.1 | None | ERR3439268 | Sensitive | lineage4.9 | None | ERR3439285 | Sensitive | lineage4.9 | None | ERR3439441 | Other | La1.8.1 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3445504 | HR-TB | None | ERR3468561 | HR-TB | lineage4.9 | None | ERR3468613 | RR-TB | La1.8.1 | None | ERR3797043 | HR-TB | None | ERR3797046 | HR-TB | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797081 | Sensitive | lineage4 | None | ERR405209 | Sensitive | lineage4 | None | ERR4187652 | Other | lineage4.9 | None | ERR4132460 | MDR-TB | lineage2.2.1 | None | ERR4188158 | Other | lineage4.9 | None | ERR4188010 | Other | La1.8.1 | None | ERR4188213 | HR-TB | La1.8.1 | None | ERR4188202 | Other | La1.8.1 | None | ERR4596902 | HR-TB | lineage3 | None | ERR4188403 | Other | La1.8.1 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4769404 | Other | La1.3 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769408 | Other | La1.3 | None | ERR4769406 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769427 | Other | La1.2 | None | ERR4769452 | HR-TB | None | ERR4769436 | Other | La1.3 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769446 | Sensitive | lineage4.9;La1.3 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769482 | Sensitive | La1 | None | ERR4769450 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769507 | Sensitive | lineage4.9 | None | ERR4769506 | Sensitive | La1.3 | None | ERR4769525 | Sensitive | lineage4.9 | None | ERR4769512 | Sensitive | lineage4.9 | None | ERR4769514 | Other | La1.3 | None | ERR4769518 | Sensitive | lineage4.9 | None | ERR4769516 | Other | La1.3 | None | ERR4769517 | Other | La1.3 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4769527 | Sensitive | lineage4.9 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769553 | RR-TB | lineage4.9 | None | ERR4769552 | Other | La1.3 | None | ERR4769555 | Other | La1.3 | None | ERR4799025 | Pre-XDR-TB | None | ERR4796577 | MDR-TB | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4800102 | Sensitive | lineage3.1.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR5908124 | Other | lineage4.8 | None | ERR4811493 | HR-TB | None | ERR4811101 | Other | lineage4.4.2 | None | ERR4811708 | HR-TB | lineage4 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR6197026 | RR-TB | lineage4.9 | None | ERR5987345 | Pre-XDR-TB | lineage2.2.1 | None | ERR6197022 | Other | lineage4.9 | None | ERR5979407 | Other | lineage3 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR6197024 | RR-TB | lineage4.9 | None | ERR6197030 | Other | lineage4.9 | None | ERR6197028 | Other | lineage4.9 | None | ERR6197042 | RR-TB | lineage4.9 | None | ERR6197032 | Other | lineage4.9 | None | ERR6197036 | Other | lineage4 | None | ERR6197040 | Other | lineage4.9 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6359070 | Other | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR6866241 | Other | lineage4.3.2 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR736837 | Other | lineage4.9 | None | ERR736822 | Sensitive | lineage4.4.1.2 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR751345 | Other | lineage5.1.1 | None | ERR7821140 | Sensitive | lineage2.2.1.1 | None | ERR752229 | Other | lineage4.5 | None | ERR8665619 | Pre-XDR-TB | lineage2.2.1 | None | ERR8774355 | MDR-TB | lineage2.2.1 | None | ERR212114 | Other | lineage4.3.4.2.1 | None | ERR037504 | Other | lineage4.9.1 | None | ERR8975044 | Other | lineage4.1.1.2 | None | ERR9117704 | Other | lineage4.6 | None | ERR9117729 | Other | lineage3 | None | ERR9117725 | Other | lineage4.1.1 | None | ERR9117709 | HR-TB | None | ERR9117740 | Other | lineage3.1.1 | None | ERR9117732 | Other | lineage1.2.2.2 | None | ERR9117806 | Other | lineage4.8 | None | ERR9117794 | Sensitive | lineage3 | None | ERR9285979 | RR-TB | lineage3.1.1 | None | ERR9117812 | Other | lineage4.3.1.1 | None | ERR9119120 | Other | lineage4.8 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9117827 | Other | lineage1.2.2.2 | None | ERR9117841 | Other | lineage4.8.2 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR9786076 | Sensitive | lineage3 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR9786639 | Sensitive | lineage4.8 | None | ERR9787033 | Sensitive | lineage6 | None | ERR983241 | MDR-TB | lineage2.2.1 | None | ERR9787336 | Other | lineage6 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | ERR9907760 | Pre-XDR-TB | lineage4.3 | None | ERR9992784 | Pre-XDR-TB | lineage2.2.2 | None | SRR10303325 | MDR-TB | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR10315715 | MDR-TB | lineage4.4.1.1.1 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10315640 | MDR-TB | lineage4.8 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR10430377 | MDR-TB | lineage2.2.1 | None | SRR10482948 | Other | La1.8.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1062864 | Sensitive | lineage4.9;lineage2.2.1 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR10851629 | Sensitive | lineage4.3.3 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR11349135 | XDR-TB | lineage4.3.3 | None | SRR10869254 | Pre-XDR-TB | lineage2.2.1 | None | SRR10869302 | MDR-TB | lineage4.3.2.1 | None | SRR11342685 | HR-TB | lineage4.4.1.1 | None | SRR10869160 | Sensitive | lineage2.2.1.1 | None | SRR11342634 | MDR-TB | lineage4.8 | None | SRR11342688 | Other | lineage4.2.2.2 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR11349207 | RR-TB | lineage2.2.1 | None | SRR11349187 | Pre-XDR-TB | lineage4.8.1 | None | SRR11349203 | MDR-TB | lineage4.4.1.1 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR11462861 | Other | La1.8.1 | None | SRR1172717 | Other | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1173521 | HR-TB | lineage4.9 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1172987 | HR-TB | lineage4.9 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175473 | Other | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175513 | Other | lineage4.9 | None | SRR1175508 | Other | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180237 | Sensitive | lineage4.1.2 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181085 | Sensitive | lineage4.1.2 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181242 | Sensitive | lineage4.1.2 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1182994 | Sensitive | lineage4.1.2 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR11972438 | HR-TB | lineage1.1.1 | None | SRR11972327 | Pre-XDR-TB | lineage2.2.1 | None | SRR11871419 | Pre-XDR-TB | lineage2.2.1 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR11972394 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR12199461 | Sensitive | lineage1.1.3.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR124452 | HR-TB | lineage2 | None | SRR13180204 | Sensitive | lineage3 | None | SRR124451 | HR-TB | None | SRR124453 | HR-TB | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR13180363 | Sensitive | lineage4.1.2.1 | None | SRR13180362 | Sensitive | lineage4.1.2.1 | None | SRR14782405 | HR-TB | None | SRR13423629 | MDR-TB | lineage2.2.1 | None | SRR13888750 | Other | La2 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR14801720 | RR-TB | lineage4.8 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR15368914 | MDR-TB | lineage2.2.1 | None | SRR16157123 | Other | lineage4.9 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR16058726 | Other | lineage2.2.1 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR1792022 | Other | La1.8.1 | None | SRR1792011 | Other | La1.8.1 | None | SRR1792232 | Other | La1.7.1 | None | SRR1792025 | Other | La1.8.1 | None | SRR1792024 | Other | La1.8.1 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR1792247 | Other | La1.7.1 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR18002873 | Pre-XDR-TB | lineage4.4.2;lineage4.2.2;lineage2.2.1 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002876 | MDR-TB | lineage2.2.2;lineage2.2.1 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR18002900 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002888 | RR-TB | lineage2.2.1 | None | SRR18002901 | MDR-TB | lineage2.2.1 | None | SRR18002926 | Other | lineage2.2.1 | None | SRR18002909 | MDR-TB | lineage2.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002937 | Other | lineage2.2.1 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002956 | HR-TB | lineage2.2.1 | None | SRR18002954 | Other | lineage2.2.1 | None | SRR18002964 | Other | lineage2.2.1 | None | SRR18002967 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002974 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002945 | RR-TB | lineage2.2.1 | None | SRR18002948 | Other | lineage2.2 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR18002978 | Sensitive | lineage4.5 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18002980 | Other | lineage2.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR18003007 | MDR-TB | lineage4.5 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR18002997 | Other | lineage2.2.1 | None | SRR18002995 | Other | lineage4.4.2 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18002999 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003009 | MDR-TB | lineage2.2.1 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003027 | Other | lineage2.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18003032 | Other | lineage2.2.1 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | SRR18003052 | Other | lineage2.2.1.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR18003045 | Other | lineage2.2.1 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR18003038 | Other | lineage2.2.1 | None | SRR18003049 | Other | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR18213800 | Other | lineage3.1.2 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR18913779 | Other | lineage3 | None | SRR19303773 | Other | lineage4.6.2.2 | None | SRR19303818 | Other | lineage4.3.4.2 | None | SRR19303798 | Sensitive | lineage4.4.1.1 | None | SRR19303796 | Other | lineage4.3.3 | None | SRR19303805 | Other | lineage4.8 | None | SRR19303817 | Other | lineage2.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR19303815 | Other | lineage4.8 | None | SRR19303907 | Other | lineage4.8 | None | SRR19303819 | Other | lineage4.6.2.2 | None | SRR19303899 | Other | lineage3 | None | SRR19303985 | Other | lineage4.8 | None | SRR19303917 | Other | lineage2.2.1 | None | SRR19303949 | Other | lineage4.3.3 | None | SRR19303960 | Sensitive | lineage4.4.1.2 | None | SRR19304029 | Other | lineage4.8 | None | SRR19304035 | Other | lineage4.1.2.1 | None | SRR19304083 | Other | lineage4.4.1.1 | None | SRR19304094 | Other | lineage6 | None | SRR19304104 | Other | lineage4.8 | None | SRR2100067 | Other | lineage4.3.3 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20970016 | Other | lineage2.2 | None | SRR19304096 | Other | La1.2 | None | SRR19304095 | Other | lineage4.1.2.1 | None | SRR19304115 | Other | lineage4.1.2.1 | None | SRR20632814 | Sensitive | lineage4 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR2101312 | MDR-TB | lineage2.2.1 | None | SRR2101774 | Sensitive | lineage2.2.1 | None | SRR2101617 | Other | lineage4.1.1 | None | SRR2101685 | Sensitive | lineage4.9 | None | SRR21240012 | Sensitive | lineage4.1.2.1 | None | SRR2101786 | Sensitive | lineage4.4.1.1 | None | SRR2101803 | Sensitive | lineage4.3.3 | None | SRR21239825 | Sensitive | lineage4.3.4.2 | None | SRR21240038 | Other | lineage4.1.2.1 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR21469201 | Other | La1.7.1 | None | SRR21240093 | Other | lineage4.1.2.1 | None | SRR21675637 | Sensitive | lineage4.3.3 | None | SRR21469202 | Other | La1.7.1 | None | SRR21595944 | Other | lineage2.2.1 | None | SRR21658550 | Other | lineage1.1.1 | None | SRR21469200 | Other | La1.7.1 | None | SRR22424765 | MDR-TB | lineage4 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR22175227 | Pre-XDR-TB | lineage3 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR21722120 | Sensitive | lineage4.1.2.1 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR22048352 | Sensitive | lineage4.2.2.2 | None | SRR22048474 | RR-TB | lineage4.8 | None | SRR22048536 | Other | lineage4.3.3 | None | SRR22424851 | MDR-TB | lineage4.3.3 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR23861939 | Sensitive | lineage4.3.3 | None | SRR22424905 | RR-TB | lineage4.9 | None | ERR176780 | Sensitive | lineage4.9 | None | ERR161014 | Sensitive | lineage4.3.4.2.1 | None | ERR190339 | Sensitive | lineage4.3.4.2.1 | None | ERR4814496 | RR-TB | lineage4.1.2 | None | ERR4814639 | HR-TB | lineage4 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | ERR161173 | Sensitive | lineage4.3.4.2.1 | None | ERR4814690 | Sensitive | lineage2.2.1 | None | ERR4814643 | Other | lineage4.1.2.1 | None | ERR171142 | Other | lineage4.9;lineage3.1.1 | None | ERR4815471 | Other | lineage4.9 | None | ERR171135 | Other | lineage2.2.1 | za | ERR1750889 | Other | lineage4.4.1.1 | None | ERR1750908 | Sensitive | lineage4 | None | ERR1750909 | RR-TB | lineage4.1.1.2 | None | ERR1750901 | Sensitive | lineage4.7 | None | ERR1750907 | RR-TB | None | ERR176450 | Sensitive | lineage4.1.1 | None | ERR1750916 | Other | lineage2.2.1.1 | None | ERR1750938 | Other | lineage4.4.1 | None | ERR176580 | Sensitive | lineage4.3.4.2.1 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | SRR3675270 | HR-TB | None | SRR3675252 | RR-TB | lineage1.1.2 | None | SRR3675265 | Other | lineage4 | None | SRR3675509 | Other | lineage4.9 | None | SRR3675282 | Other | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR4816964 | Other | lineage4.9 | None | SRR3675513 | Other | lineage4.8 | None | ERR2027207 | Sensitive | lineage3 | None | ERR4816009 | Other | lineage1.1.2 | None | ERR4816090 | Other | La1.2.BCG | None | ERR4817342 | Other | lineage4.1.1 | None | ERR2027252 | Other | lineage4.8;lineage4.2.1.1 | None | SRR3675547 | Other | lineage4.9 | None | SRR3675565 | Other | lineage3 | None | ERR2027291 | Sensitive | lineage3.1.3 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR2027255 | HR-TB | lineage4.4.1.1 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR4816300 | Other | lineage4.1.2.1 | None | ERR4816403 | Other | lineage6.2.3 | None | ERR4816417 | Other | lineage4.9 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR4816470 | Other | lineage3 | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR4817131 | Pre-XDR-TB | None | ERR4816604 | RR-TB | lineage4.1.2 | None | ERR4817398 | Other | lineage3.1.1 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4817189 | Other | lineage4.7 | None | ERR4817499 | Sensitive | lineage2.2.1.1 | None | ERR3275996 | HR-TB | lineage4.3.4.1 | nl | ERR2179737 | HR-TB | lineage4.2 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4816762 | Other | lineage4;lineage2 | None | SRR4033549 | HR-TB | lineage2.2.2 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4818663 | Other | lineage3 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR2512986 | Other | lineage3 | None | ERR2510804 | Other | lineage2.2.1 | None | ERR2510794 | Other | lineage4.3.4.2 | None | ERR2513401 | HR-TB | lineage3 | None | ERR2513405 | Other | lineage2.2.1 | None | ERR4818831 | Other | lineage3 | None | ERR4818065 | Other | lineage4.1.2.1 | None | ERR2446566 | Other | lineage4.1 | None | ERR4818825 | HR-TB | lineage4.1.2.1 | None | ERR2515055 | Other | lineage3 | None | ERR4818259 | RR-TB | lineage4.1.1 | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR2509885 | RR-TB | lineage3 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4818407 | Other | lineage4.3.2 | None | ERR2513259 | Other | lineage3 | None | ERR1750900 | Sensitive | lineage4.1.1.3 | zw | SRR5007155 | HR-TB | lineage4.1.2.1 | None | ERR4818536 | Other | lineage4.9 | None | ERR2512770 | Other | lineage4.2.1 | None | ERR4818574 | Other | lineage6 | None | ERR4818561 | HR-TB | lineage4 | None | ERR3275709 | HR-TB | lineage3 | nl | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | SRR5007163 | MDR-TB | lineage4;lineage3 | None | ERR4819462 | Other | lineage4 | None | SRR5007165 | MDR-TB | lineage3 | None | SRR5007170 | RR-TB | lineage4.9 | None | ERR4817555 | RR-TB | lineage3 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR4819093 | Other | lineage4.3.3 | None | ERR4819267 | Sensitive | lineage3.1.1 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR2514181 | Other | lineage1.2.1.2.1 | None | SRR5007199 | Other | lineage4.1.2.1 | None | SRR5007204 | Other | lineage4.1.2.1 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4819357 | Other | lineage4.9 | None | ERR1023509 | Other | None | ERR4819546 | HR-TB | lineage3 | None | ERR4820746 | RR-TB | lineage3 | None | ERR2514394 | Other | lineage4.3.4.2 | None | ERR1035138 | MDR-TB | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | SRR5341456 | Other | None | ERR4820484 | Other | lineage4.8 | None | ERR4820801 | Other | lineage1.2.2 | None | SRR5341306 | Pre-XDR-TB | lineage4.4 | None | SAMN02585942 | Sensitive | lineage4.1.2 | None | SRR5341330 | HR-TB | None | ERR4819933 | Other | lineage4.9 | None | ERR4819980 | Other | lineage4.1.2.1 | None | ERR2515007 | Other | lineage3 | None | ERR4820026 | Other | lineage3 | None | ERR6359082 | Other | lineage4.9 | None | ERR4820193 | Other | lineage3 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR2515230 | Sensitive | lineage4.8 | None | ERR4821906 | Other | lineage4.1.1 | None | ERR4821057 | HR-TB | lineage4 | None | SRR6046089 | Other | lineage4.1.2.1 | None | SRR6045464 | Other | lineage4.1.1.3 | None | SRR6045496 | Other | lineage6.1.3 | None | ERR4821143 | RR-TB | lineage4.9 | None | SRR6045516 | Other | lineage3.1.1 | None | SRR5535933 | HR-TB | None | SRR6045553 | RR-TB | lineage4.9 | None | ERR4821811 | RR-TB | lineage4.9 | None | SRR6045422 | Other | lineage4.3.1.1 | None | SRR6046087 | Other | None | ERR2660441 | Sensitive | lineage1.1.3.1 | None | SRR6045537 | Pre-XDR-TB | lineage2.2.1 | None | ERR2660499 | Sensitive | lineage4.1.1.3 | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR2660539 | Other | lineage4.9 | None | ERR4822033 | Other | lineage3 | None | ERR4821276 | Other | lineage3 | None | ERR4821747 | MDR-TB | lineage4.9;lineage4.2.1 | None | ERR4821492 | HR-TB | lineage3 | None | ERR4822179 | Sensitive | lineage3 | None | ERR4822035 | Other | lineage4.8 | None | ERR4821550 | Other | lineage2.2.1 | None | ERR4822176 | Other | lineage4.1.1.2 | None | ERR4821665 | Sensitive | lineage4.9 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | SRR6045565 | Other | lineage4.6.2.2 | None | SRR6046113 | Other | lineage4.1.1.3 | None | SRR6045591 | Other | lineage4.1.2.1 | None | SRR6045621 | Other | lineage4.1.1.3 | None | SRR6045613 | Other | lineage3.1.3 | None | SRR6045614 | Other | lineage4.8 | None | SRR6045763 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6045642 | Other | lineage3.1.2.2 | None | SRR5818388 | Other | lineage4.9 | None | SRR6045726 | Other | lineage3 | None | SRR6046210 | Other | lineage4 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045705 | Other | lineage4.9 | None | SRR5818694 | RR-TB | lineage4.2.2.2;lineage3 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR5818690 | Other | lineage4.2.2.2 | None | SRR6045778 | Other | lineage3.1 | None | SRR6045790 | Other | lineage4.1.1.3.1 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6045843 | Other | lineage4.2.2.2 | None | SRR6044841 | Other | lineage4.9 | None | SRR6044784 | MDR-TB | lineage3 | None | SRR6044838 | Other | lineage4.9 | None | SRR6044769 | Other | lineage1.1.2 | None | SRR6044787 | Other | lineage4.4 | None | SRR6045909 | Other | lineage4.8 | None | SRR6045910 | Other | lineage3.1 | None | SRR6045928 | Other | lineage4.9 | None | SRR6044873 | Other | lineage4.1.1.3.1 | None | SRR6045944 | Other | lineage4.1.2.1 | None | SRR6044958 | Other | lineage4.4.1.1 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR6045017 | Other | lineage3.1.2.2 | None | SRR6044993 | Other | lineage3 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045053 | Other | None | SRR6045022 | Other | lineage3.1.1 | None | SRR6045052 | HR-TB | lineage4.2.1.1 | None | SRR6045178 | Other | lineage3 | None | SRR6045986 | Other | lineage3 | None | SRR6045138 | Other | lineage3.1.1 | None | SRR6046020 | Other | lineage3 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6046046 | Other | None | SRR6045205 | Sensitive | lineage4.9 | None | SRR6045217 | Other | lineage4 | None | SRR6046189 | Other | lineage4.8 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6045295 | Other | lineage4.7 | None | SRR6045312 | Other | lineage1.1.3.3 | None | SRR6045384 | Other | lineage4.1.2 | None | SRR6046239 | Other | lineage4.9;lineage3 | None | SRR6046275 | Other | lineage3.1.1 | None | SRR6046299 | HR-TB | None | SRR6046343 | Other | lineage2.2.1 | None | SRR6046359 | Other | lineage4.7 | None | SRR6046376 | Other | lineage3 | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR2851354 | RR-TB | lineage4.9 | None | ERR2517074 | Pre-XDR-TB | lineage3 | gb | ERR4829333 | RR-TB | lineage4 | None | ERR2851359 | Other | lineage4.9 | None | ERR4829289 | Other | lineage4.1.2.1 | None | SRR6046440 | Other | lineage3.1.2.2 | None | SRR6046463 | Other | lineage4.4.1.1 | None | SRR6046442 | Other | lineage3 | None | SRR6046497 | Other | lineage4.9 | None | SRR6046484 | Other | lineage1.2.2.2 | None | SRR6046482 | HR-TB | None | SRR6046492 | Other | None | SRR6046517 | Other | lineage4.8 | None | SRR6046767 | RR-TB | lineage2.2.1 | None | SRR6046612 | Other | lineage1.1.1.1 | None | SRR6046701 | Other | lineage3.1.2.2 | None | SRR6046729 | Other | None | SRR6397640 | Other | lineage4.2.1.1 | None | SRR6046802 | Other | lineage4 | None | SRR6046848 | Other | lineage4.6.5 | None | SRR6046878 | HR-TB | lineage4 | None | SRR6046790 | Other | lineage4.7 | None | SRR6046839 | Other | lineage4.9 | None | SRR6982078 | Sensitive | None | ERR3077969 | Other | La1.3 | None | ERR4812328 | Other | lineage4.3.3 | pe | ERR323037 | HR-TB | lineage4 | None | ERR4814994 | HR-TB | lineage2.2.1 | gb | SRR6982139 | Sensitive | lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR4831117 | HR-TB | None | SRR6982414 | Sensitive | lineage4.9 | None | ERR4972567 | MDR-TB | lineage4.3.2 | None | ERR4863405 | Pre-XDR-TB | lineage4.1.2.1;lineage2.2.1 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SRR6856119 | Sensitive | lineage2.2.1 | None | SRR6982104 | Sensitive | lineage2.2.1 | None | SRR6982141 | RR-TB | lineage4.3.3 | None | SRR6785282 | Other | lineage4.3.3 | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR6896339 | MDR-TB | lineage2.2.1 | None | SRR6896340 | HR-TB | lineage4.4.1.1 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | SRR6982195 | RR-TB | lineage4.4 | None | SRR6982213 | Sensitive | lineage4.3.2.1 | None | SRR6982227 | Other | lineage4.1.1 | None | SRR6982246 | Sensitive | lineage4 | None | SRR6807688 | Pre-XDR-TB | lineage4.2.1 | None | SRR6832644 | Other | lineage4.3.3 | None | SRR6982337 | Sensitive | lineage4.7 | None | SRR6981922 | Sensitive | lineage4.3.2.1 | None | SRR6855695 | Sensitive | lineage4.8 | None | SRR6824357 | Pre-XDR-TB | lineage4.4.2 | None | SRR6981993 | Other | lineage4.3.2.1 | None | SRR6982362 | Other | lineage4.3.2.1 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | SRR6981977 | Sensitive | lineage2.2.1 | None | SRR6982363 | Sensitive | lineage4.3.3 | None | SRR6982385 | Sensitive | lineage4.1.2 | None | SRR6824501 | Pre-XDR-TB | lineage2.2.1 | None | SRR6982043 | Sensitive | lineage4.4.1.1 | None | SRR6982014 | Other | lineage4.1.1 | None | SRR6982026 | Sensitive | lineage4.3.3 | None | SRR6982035 | Sensitive | lineage4.9 | None | SRR6824624 | Sensitive | lineage2.2.1 | None | SRR6982075 | Sensitive | lineage3 | None | SRR6982048 | HR-TB | lineage4.3.2.1 | None | SRR6982057 | Pre-XDR-TB | lineage4.3 | None | ERR5087846 | Other | La1.8.1 | None | SRR6982405 | Sensitive | None | SRR6856032 | Sensitive | lineage2.2.1 | None | ERR2984800 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR4831863 | HR-TB | lineage2.2.1.1 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR5087789 | Other | La1.8.1 | None | ERR5087596 | Other | La1.8.1 | None | ERR5311077 | RR-TB | La1.8.1 | None | ERR5087486 | Other | La1.8.1 | None | SRR7131004 | Other | lineage4.6.2.2 | None | SRR7131061 | Other | lineage2.2.1 | None | SRR7131109 | Pre-XDR-TB | lineage4.8 | None | SRR7131068 | Other | lineage4.8 | None | SRR7131075 | Other | lineage4.8 | None | SRR7131123 | Other | lineage4.8 | None | SRR7131198 | Other | lineage4.3.3 | None | SRR7131145 | Other | lineage4.1.2.1 | None | SRR7131147 | Other | lineage4.1.2.1 | None | SRR7131161 | Other | lineage4.8 | None | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR7131195 | Other | lineage2.2.1 | None | SRR7131196 | Other | lineage4.8 | None | SRR7131216 | Other | lineage4.1.2.1 | None | SRR7131230 | HR-TB | lineage4.3.4.2 | None | SRR7131229 | Other | lineage4.1.2.1 | None | SRR7131234 | Other | lineage4.9 | None | SRR7131233 | MDR-TB | lineage4.3.3 | None | SRR7131236 | Other | lineage4.3.4.2 | None | SRR7131297 | Other | lineage1.2.1.2 | None | SRR7131237 | Other | lineage2.2.1 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR7131294 | Other | lineage6.3.1 | None | SRR7496523 | Other | lineage4.7 | None | SRR7496471 | Sensitive | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR7585400 | MDR-TB | lineage3 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR8651633 | Pre-XDR-TB | lineage4.4.2 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | ERR038289 | Other | lineage4.3.3 | None | ERR323061 | Sensitive | lineage4.9 | None | ERR323068 | Sensitive | lineage4.9 | None | DRR120409 | HR-TB | La2 | None | DRR184903 | Sensitive | lineage2.2.2 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | DRR185000 | Other | lineage1.1.1.1 | None | DRR188519 | Other | lineage4.4.2 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR067712 | HR-TB | lineage4 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR1034638 | Pre-XDR-TB | lineage2.2.1 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR10762297 | MDR-TB | lineage4.2.1 | None | ERR10762248 | MDR-TB | lineage4.2.1 | None | ERR10796555 | Other | lineage4.1.2.1 | None | ERR10796553 | Other | lineage4.9;lineage1.1 | None | ERR10796556 | Other | lineage4.3.4.1 | None | ERR10796558 | Sensitive | lineage4 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | ERR10796561 | Other | lineage4.3.2 | None | ERR10796560 | MDR-TB | lineage4.9;lineage4.1 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR10796566 | Other | lineage4.9;lineage4.3.4 | None | ERR10796562 | Other | lineage4.3.4.1 | None | ERR10796568 | Other | lineage4.9 | None | ERR10796582 | HR-TB | lineage4.3 | None | ERR10796577 | RR-TB | lineage4.9 | None | ERR10796571 | Other | lineage4.9 | None | ERR10796581 | HR-TB | lineage4.1.2 | None | ERR10796588 | Other | lineage4 | None | ERR10796589 | Other | lineage4.9 | None | ERR10796592 | Other | lineage4 | None | ERR10796591 | MDR-TB | lineage4.9 | None | ERR10796590 | Other | lineage4.9 | None | ERR10796596 | Other | lineage4.9 | None | ERR10796593 | RR-TB | lineage4 | None | ERR10796618 | Other | lineage4.3.4.1 | None | ERR10796597 | Other | lineage4 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR10796599 | Other | lineage4 | None | ERR10796615 | Other | lineage4 | None | ERR10796627 | Other | lineage4 | None | ERR10796620 | Other | lineage4.1.1 | None | ERR10796626 | Other | lineage4.1.2 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR10796632 | Other | lineage4.3.3 | None | ERR10796629 | Other | lineage4 | None | ERR10796631 | Other | lineage4.3.4 | None | ERR10796634 | Other | lineage4 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR10796640 | Other | lineage4.1.2.1 | None | ERR10796635 | Other | lineage4 | None | ERR108476 | Sensitive | lineage4.1.2.1 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR4820798 | Other | lineage3.1.2.1 | gb | ERR11465511 | Sensitive | lineage4.3.4.2.1 | None | ERR133816 | MDR-TB | lineage2.2.1 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR3283055 | HR-TB | None |
|---|
