TB-Profiler result

Run: SRR1180446
Summary

Run ID: SRR1180446

Sample name:

Date: 03-04-2023 04:10:11

Number of reads: 85116

Percentage reads mapped: 2.57

Strain: lineage4.9

Drug-resistance: Other

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Drug resistance: This table reports drug-resistance associated mutations found in known resistance genes
Drug Resistance Supporting mutations
Lineage Table: The lineage is inferred by analysing lineage specific SNPs
Lineage Family Main Spoligotype RDs Frequency
lineage4 Euro-American LAM;T;S;X;H None 1.0
lineage4.9 Euro-American (H37Rv-like) T1 None 1.0
Drug resistance-Associated Mutations: This table reports mutations found in candidate resistance genes which have been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs
rrs 1472644 n.799C>T non_coding_transcript_exon_variant 0.95 streptomycin
rrs 1473247 n.1402C>A non_coding_transcript_exon_variant 0.87 kanamycin, capreomycin, aminoglycosides, amikacin
rrs 1473329 n.1484G>T non_coding_transcript_exon_variant 0.54 kanamycin, capreomycin, aminoglycosides, amikacin
Non-Associated Mutations: This table reports mutations found in candidate resistance genes which have not been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction
gyrB 6091 c.852G>C synonymous_variant 1.0
gyrB 6098 p.Val287Leu missense_variant 1.0
gyrB 6115 c.876A>G synonymous_variant 1.0
gyrB 6122 p.Ala295Ser missense_variant 1.0
gyrB 6127 c.888G>C synonymous_variant 1.0
gyrB 6130 c.891T>C synonymous_variant 1.0
gyrB 6139 c.900G>T synonymous_variant 1.0
gyrB 6190 c.951A>G synonymous_variant 1.0
gyrA 6316 c.-986G>C upstream_gene_variant 1.0
gyrB 6323 p.Val362Leu missense_variant 1.0
gyrB 6326 p.Ser363Gly missense_variant 1.0
gyrA 6331 c.-971A>G upstream_gene_variant 1.0
gyrA 6358 c.-944C>G upstream_gene_variant 1.0
gyrA 6724 c.-578G>C upstream_gene_variant 1.0
gyrA 6727 c.-575G>C upstream_gene_variant 1.0
gyrA 6730 c.-572A>C upstream_gene_variant 1.0
gyrB 6737 p.Thr500Ala missense_variant 1.0
gyrA 6742 c.-560A>G upstream_gene_variant 1.0
gyrA 6745 c.-557T>C upstream_gene_variant 1.0
gyrB 6749 p.Ala504Ser missense_variant 1.0
gyrA 6760 c.-542G>C upstream_gene_variant 1.0
gyrB 6764 p.Leu509Phe missense_variant 1.0
gyrA 6775 c.-527G>T upstream_gene_variant 1.0
gyrA 6793 c.-509T>C upstream_gene_variant 1.0
gyrB 6797 p.Gly520Ser missense_variant 1.0
gyrA 6841 c.-461T>C upstream_gene_variant 1.0
gyrA 6844 c.-458T>C upstream_gene_variant 1.0
gyrA 7366 p.Gln22Leu missense_variant 1.0
gyrA 7386 p.Ile29Leu missense_variant 1.0
gyrA 7394 c.93T>C synonymous_variant 1.0
gyrA 7406 c.105G>C synonymous_variant 1.0
gyrA 7415 c.114C>T synonymous_variant 1.0
gyrA 7418 c.117C>T synonymous_variant 1.0
gyrA 7424 c.123G>C synonymous_variant 1.0
gyrA 7427 c.126G>C synonymous_variant 1.0
gyrA 7430 p.Glu43Asp missense_variant 1.0
gyrA 7436 c.135C>G synonymous_variant 1.0
gyrA 7442 c.141G>C synonymous_variant 1.0
gyrA 7451 c.150C>G synonymous_variant 1.0
gyrA 7457 c.156T>C synonymous_variant 1.0
gyrA 7463 c.162G>C synonymous_variant 1.0
ccsA 620631 c.741T>C synonymous_variant 1.0
ccsA 620647 p.Glu253His missense_variant 1.0
ccsA 620685 c.796_800delACGGT frameshift_variant 1.0
ccsA 620693 c.803_804insTGGAG frameshift_variant 1.0
ccsA 620701 p.Ala271Ile missense_variant 1.0
ccsA 620709 c.819G>C synonymous_variant 1.0
ccsA 620733 c.843G>C synonymous_variant 1.0
rpoB 760172 c.366G>C synonymous_variant 1.0
rpoB 760181 c.375T>G synonymous_variant 1.0
rpoB 760184 c.378A>G synonymous_variant 1.0
rpoB 760235 c.429T>C synonymous_variant 1.0
rpoB 760418 c.612G>C synonymous_variant 1.0
rpoB 760430 c.624T>C synonymous_variant 1.0
rpoB 760433 p.Asp209Glu missense_variant 1.0
rpoB 760434 p.Val210Ile missense_variant 1.0
rpoB 760449 p.Thr215Ala missense_variant 1.0
rpoB 760464 p.Ile220Val missense_variant 1.0
rpoB 760475 c.669A>G synonymous_variant 1.0
rpoB 760479 p.Arg225Lys missense_variant 1.0
rpoB 760484 c.678A>G synonymous_variant 1.0
rpoB 760487 c.681G>C synonymous_variant 1.0
rpoB 760502 c.696C>G synonymous_variant 1.0
rpoB 761084 c.1278C>A synonymous_variant 1.0
rpoB 761088 p.Ser428Cys missense_variant 1.0
rpoB 761097 c.1291_1293delAGCinsTCG synonymous_variant 1.0
rpoB 761102 c.1296A>G synonymous_variant 1.0
rpoB 761132 c.1326G>C synonymous_variant 1.0
rpoB 761133 c.1327T>C synonymous_variant 1.0
rpoB 761147 c.1341C>T synonymous_variant 1.0
rpoB 761150 c.1344A>T synonymous_variant 1.0
rpoB 761207 c.1401C>T synonymous_variant 1.0
rpoB 761213 c.1407G>C synonymous_variant 1.0
rpoB 761234 c.1428G>C synonymous_variant 1.0
rpoB 761249 c.1443A>G synonymous_variant 1.0
rpoB 761261 c.1455G>C synonymous_variant 1.0
rpoB 761264 c.1458C>G synonymous_variant 1.0
rpoB 761273 c.1467T>C synonymous_variant 0.89
rpoB 761276 c.1470G>C synonymous_variant 0.89
rpoB 761318 c.1512G>C synonymous_variant 1.0
rpoB 761327 c.1521A>G synonymous_variant 1.0
rpoB 761345 c.1539G>C synonymous_variant 1.0
rpoB 761346 p.Val514Thr missense_variant 1.0
rpoB 761355 p.Val517Lys missense_variant 1.0
rpoB 761360 c.1554T>C synonymous_variant 1.0
rpoB 761362 p.Ser519Thr missense_variant 1.0
rpoB 761375 c.1569G>C synonymous_variant 1.0
rpoB 761393 p.Glu529Asp missense_variant 1.0
rpoB 761537 c.1731C>G synonymous_variant 1.0
rpoB 761552 c.1746G>C synonymous_variant 1.0
rpoB 761555 c.1749G>C synonymous_variant 1.0
rpoB 761558 c.1752C>G synonymous_variant 1.0
rpoB 761561 c.1755C>G synonymous_variant 1.0
rpoB 761565 p.Met587Leu missense_variant 1.0
rpoB 761570 c.1764T>C synonymous_variant 1.0
rpoB 761573 c.1767C>G synonymous_variant 1.0
rpoB 761579 c.1773G>C synonymous_variant 1.0
rpoB 761594 c.1788C>G synonymous_variant 1.0
rpoB 761600 c.1794T>C synonymous_variant 1.0
rpoB 761603 c.1797C>G synonymous_variant 1.0
rpoB 761612 c.1806G>C synonymous_variant 1.0
rpoB 761615 c.1809A>C synonymous_variant 1.0
rpoB 761633 c.1827G>C synonymous_variant 1.0
rpoB 761645 c.1839C>G synonymous_variant 1.0
rpoB 761648 c.1842T>C synonymous_variant 1.0
rpoB 761649 c.1843_1844delAGinsTC synonymous_variant 1.0
rpoB 761657 c.1851C>G synonymous_variant 1.0
rpoB 761666 c.1860G>C synonymous_variant 1.0
rpoB 761675 c.1869G>C synonymous_variant 1.0
rpoB 761683 p.Leu626Arg missense_variant 1.0
rpoB 761687 c.1881C>T synonymous_variant 1.0
rpoB 761694 p.Ile630Val missense_variant 1.0
rpoB 761961 p.Pro719Ser missense_variant 1.0
rpoB 762002 c.2196C>G synonymous_variant 1.0
rpoB 762003 p.Asn733Gln missense_variant 1.0
rpoB 762011 c.2205G>C synonymous_variant 1.0
rpoB 762014 c.2208C>G synonymous_variant 1.0
rpoB 762017 c.2211A>G synonymous_variant 0.89
rpoB 762020 p.Glu738Asp missense_variant 0.85
rpoB 762026 c.2220G>C synonymous_variant 1.0
rpoB 762029 c.2223C>G synonymous_variant 0.85
rpoB 762030 p.Thr742Ser missense_variant 0.86
rpoB 762053 c.2247T>C synonymous_variant 1.0
rpoB 762057 p.Ile751Val missense_variant 0.82
rpoB 762062 c.2256T>C synonymous_variant 0.7
rpoB 762065 c.2259T>C synonymous_variant 1.0
rpoB 762068 c.2262C>T synonymous_variant 0.67
rpoB 762080 c.2274G>C synonymous_variant 1.0
rpoB 762083 c.2277T>G synonymous_variant 0.6
rpoB 762084 p.Ala760Pro missense_variant 0.6
rpoB 762098 c.2292C>G synonymous_variant 0.6
rpoB 762101 c.2295C>G synonymous_variant 1.0
rpoB 762114 p.Ile770Val missense_variant 1.0
rpoB 762176 c.2370T>G synonymous_variant 1.0
rpoB 762177 p.Arg791Gly missense_variant 0.67
rpoB 762181 p.Asp792Ala missense_variant 0.67
rpoB 762185 c.2379G>C synonymous_variant 1.0
rpoB 762189 p.Ile795Val missense_variant 0.75
rpoB 762218 c.2412T>C synonymous_variant 0.95
rpoB 762233 c.2427G>C synonymous_variant 1.0
rpoB 762245 c.2439G>C synonymous_variant 1.0
rpoB 762254 c.2448T>C synonymous_variant 1.0
rpoB 762266 c.2460T>C synonymous_variant 0.95
rpoB 762293 c.2487T>G synonymous_variant 1.0
rpoB 762296 c.2490G>C synonymous_variant 1.0
rpoB 762299 c.2493G>C synonymous_variant 1.0
rpoB 762308 c.2502G>C synonymous_variant 1.0
rpoB 762426 p.Ser874Thr missense_variant 1.0
rpoB 762430 p.Asp875Val missense_variant 1.0
rpoC 762434 c.-936T>C upstream_gene_variant 1.0
rpoC 762443 c.-927G>C upstream_gene_variant 1.0
rpoC 762470 c.-900G>C upstream_gene_variant 1.0
rpoB 762474 p.Gly890Ser missense_variant 1.0
rpoB 762489 p.Val895Gln missense_variant 1.0
rpoC 762509 c.-861T>C upstream_gene_variant 1.0
rpoB 762510 p.Ala902Pro missense_variant 1.0
rpoC 762518 c.-852C>G upstream_gene_variant 1.0
rpoB 762849 p.Tyr1015Asp missense_variant 1.0
rpoC 762857 c.-513C>G upstream_gene_variant 1.0
rpoB 762858 p.Thr1018Ser missense_variant 1.0
rpoC 762863 c.-507T>G upstream_gene_variant 1.0
rpoB 762879 p.Met1025Leu missense_variant 0.9
rpoC 762887 c.-483G>C upstream_gene_variant 0.91
rpoC 762899 c.-471G>C upstream_gene_variant 1.0
rpoC 762917 c.-453C>G upstream_gene_variant 1.0
rpoC 762923 c.-447C>G upstream_gene_variant 1.0
rpoC 762929 c.-441G>C upstream_gene_variant 1.0
rpoC 762947 c.-423C>G upstream_gene_variant 0.8
rpoC 762962 c.-408C>T upstream_gene_variant 0.75
rpoC 762971 c.-399G>C upstream_gene_variant 0.3
rpoC 762980 c.-390T>C upstream_gene_variant 0.5
rpoC 762989 c.-381G>C upstream_gene_variant 1.0
rpoC 762995 c.-375G>T upstream_gene_variant 1.0
rpoC 763013 c.-357C>G upstream_gene_variant 0.83
rpoC 763022 c.-348C>G upstream_gene_variant 1.0
rpoC 763028 c.-342T>C upstream_gene_variant 1.0
rpoC 763031 c.-339T>G upstream_gene_variant 1.0
rpoC 763040 c.-330C>G upstream_gene_variant 0.75
rpoC 763053 c.-317_-315delTTGinsCTC upstream_gene_variant 1.0
rpoC 763070 c.-300T>C upstream_gene_variant 1.0
rpoB 763074 p.Thr1090Val missense_variant 1.0
rpoB 763077 p.Val1091Pro missense_variant 0.94
rpoC 763088 c.-282C>G upstream_gene_variant 1.0
rpoC 763094 c.-276G>C upstream_gene_variant 0.94
rpoC 763115 c.-255T>C upstream_gene_variant 1.0
rpoC 763127 c.-243G>C upstream_gene_variant 1.0
rpoB 763130 p.Glu1108Asp missense_variant 1.0
rpoB 763131 p.Pro1109Ser missense_variant 1.0
rpoC 763142 c.-228C>G upstream_gene_variant 1.0
rpoC 763148 c.-222G>C upstream_gene_variant 1.0
rpoC 763160 c.-210G>C upstream_gene_variant 1.0
rpoC 763166 c.-204A>G upstream_gene_variant 1.0
rpoC 763169 c.-201A>G upstream_gene_variant 1.0
rpoB 763170 p.Leu1122Met missense_variant 1.0
rpoC 763187 c.-183C>G upstream_gene_variant 1.0
rpoC 763444 c.75T>C synonymous_variant 1.0
rpoC 763456 c.87A>G synonymous_variant 1.0
rpoC 763462 c.93G>C synonymous_variant 0.8
rpoC 763468 c.99G>C synonymous_variant 1.0
rpoC 763483 c.114G>C synonymous_variant 0.88
rpoC 763486 c.117T>G synonymous_variant 1.0
rpoC 763504 c.135C>G synonymous_variant 0.88
rpoC 763507 c.138G>C synonymous_variant 1.0
rpoC 763528 c.159G>C synonymous_variant 1.0
rpoC 763531 c.162G>C synonymous_variant 1.0
rpoC 763534 c.165T>C synonymous_variant 1.0
rpoC 763537 c.168C>G synonymous_variant 1.0
rpoC 763546 c.177A>G synonymous_variant 1.0
rpoC 763570 c.201G>C synonymous_variant 1.0
rpoC 763618 c.249C>G synonymous_variant 1.0
rpoC 763622 p.Ala85Ser missense_variant 1.0
rpoC 763633 c.264T>C synonymous_variant 1.0
rpoC 763642 c.273G>C synonymous_variant 1.0
rpoC 763660 c.291T>C synonymous_variant 1.0
rpoC 763666 c.297G>C synonymous_variant 1.0
rpoC 763675 c.306C>G synonymous_variant 1.0
rpoC 763686 p.Tyr106Phe missense_variant 0.97
rpoC 763702 c.333C>G synonymous_variant 1.0
rpoC 763708 c.339G>C synonymous_variant 1.0
rpoC 763711 c.342G>C synonymous_variant 1.0
rpoC 763714 c.345G>C synonymous_variant 1.0
rpoC 763717 c.348T>C synonymous_variant 1.0
rpoC 763751 p.Ile128Val missense_variant 0.85
rpoC 763765 c.396T>G synonymous_variant 1.0
rpoC 763772 p.Val135Met missense_variant 0.75
rpoC 763775 p.Ile136Val missense_variant 0.75
rpoC 763780 c.411C>G synonymous_variant 1.0
rpoC 763782 p.Ser138Trp missense_variant 0.67
rpoC 763792 p.Glu141Asp missense_variant 0.5
rpoC 763796 p.Met143Leu missense_variant 1.0
rpoC 763807 c.438T>C synonymous_variant 1.0
rpoC 763831 c.462A>G synonymous_variant 1.0
rpoC 763900 c.531G>C synonymous_variant 1.0
rpoC 763945 c.576T>C synonymous_variant 1.0
rpoC 763951 c.582G>C synonymous_variant 1.0
rpoC 764326 c.957G>C synonymous_variant 0.96
rpoC 764338 p.Glu323Asp missense_variant 0.97
rpoC 764365 c.996C>T synonymous_variant 1.0
rpoC 764377 c.1008C>G synonymous_variant 1.0
rpoC 764383 c.1014C>G synonymous_variant 0.95
rpoC 764387 c.1018_1020delTTGinsCTC synonymous_variant 1.0
rpoC 764405 c.1036_1038delAGGinsCGC synonymous_variant 1.0
rpoC 764431 c.1062G>C synonymous_variant 1.0
rpoC 764434 c.1065A>G synonymous_variant 1.0
rpoC 764435 c.1066_1068delAGGinsCGC synonymous_variant 1.0
rpoC 764441 p.Ile358Leu missense_variant 0.9
rpoC 764446 c.1077T>C synonymous_variant 1.0
rpoC 764452 c.1083T>C synonymous_variant 0.91
rpoC 764461 c.1092A>G synonymous_variant 1.0
rpoC 764491 c.1122G>C synonymous_variant 0.96
rpoC 764497 c.1128A>G synonymous_variant 1.0
rpoC 764498 p.Ser377Ala missense_variant 0.93
rpoC 764507 p.Ala380Ser missense_variant 0.96
rpoC 764521 c.1152T>C synonymous_variant 1.0
rpoC 764524 c.1155C>T synonymous_variant 1.0
rpoC 764536 c.1167G>C synonymous_variant 0.89
rpoC 764539 c.1170C>G synonymous_variant 0.92
rpoC 764545 c.1176C>G synonymous_variant 0.98
rpoC 764548 c.1179G>C synonymous_variant 1.0
rpoC 764560 c.1191T>C synonymous_variant 0.9
rpoC 764566 c.1197C>G synonymous_variant 1.0
rpoC 764573 p.Leu402Ile missense_variant 0.87
rpoC 764581 c.1212T>C synonymous_variant 0.88
rpoC 764582 p.Leu405Met missense_variant 0.88
rpoC 764611 c.1242G>C synonymous_variant 1.0
rpoC 764632 c.1263T>C synonymous_variant 0.9
rpoC 764650 c.1281G>T synonymous_variant 1.0
rpoC 764695 c.1326T>C synonymous_variant 0.94
rpoC 764706 p.Leu446Gln missense_variant 0.93
rpoC 764716 c.1347G>C synonymous_variant 1.0
rpoC 764737 c.1368G>C synonymous_variant 1.0
rpoC 764752 c.1383G>C synonymous_variant 1.0
rpoC 764755 p.Asp462Glu missense_variant 0.88
rpoC 764764 c.1395T>C synonymous_variant 1.0
rpoC 764797 c.1428G>C synonymous_variant 1.0
rpoC 764858 c.1489T>C synonymous_variant 1.0
rpoC 764869 c.1500C>T synonymous_variant 1.0
rpoC 764887 c.1518G>T synonymous_variant 1.0
rpoC 764888 c.1519T>C synonymous_variant 1.0
rpoC 764893 c.1524T>C synonymous_variant 1.0
rpoC 764902 c.1533C>G synonymous_variant 1.0
rpoC 765947 c.2578_2580delTTGinsCTC synonymous_variant 1.0
rpoC 765952 c.2583G>C synonymous_variant 1.0
rpoC 765958 c.2589C>G synonymous_variant 1.0
rpoC 765962 c.2593T>C synonymous_variant 1.0
rpoC 765967 c.2598C>T synonymous_variant 1.0
rpoC 765973 c.2604C>G synonymous_variant 1.0
rpoC 765994 c.2625A>T synonymous_variant 1.0
rpoC 766003 c.2634G>C synonymous_variant 1.0
rpoC 766012 c.2643C>G synonymous_variant 1.0
rpoC 766021 c.2652G>C synonymous_variant 1.0
rpoC 766025 p.Val886Ile missense_variant 1.0
rpoC 766034 p.His889Glu missense_variant 1.0
rpoC 766043 p.Gln892Gly missense_variant 1.0
rpoC 766336 c.2967C>G synonymous_variant 1.0
rpoC 766345 c.2976T>C synonymous_variant 1.0
rpoC 766348 c.2979A>G synonymous_variant 1.0
rpoC 766361 p.Val998Ile missense_variant 1.0
rpoC 766366 c.2997C>G synonymous_variant 1.0
rpoC 766369 c.3000C>G synonymous_variant 1.0
rpoC 766375 c.3006C>G synonymous_variant 1.0
rpoC 766381 c.3012C>T synonymous_variant 1.0
rpoC 766384 c.3015A>G synonymous_variant 1.0
rpoC 766387 c.3018C>T synonymous_variant 1.0
rpoC 766393 c.3024C>G synonymous_variant 1.0
rpoC 766402 c.3033C>G synonymous_variant 1.0
rpoC 766408 c.3039C>T synonymous_variant 1.0
rpoC 766973 p.Ala1202Ser missense_variant 1.0
rpoC 766986 p.Val1206Glu missense_variant 1.0
rpoC 766990 c.3621G>C synonymous_variant 1.0
rpoC 767014 c.3645G>C synonymous_variant 1.0
rpoC 767032 c.3663G>C synonymous_variant 1.0
rpoC 767038 c.3669G>C synonymous_variant 1.0
rpoC 767041 c.3672G>C synonymous_variant 1.0
rpoC 767044 c.3675G>C synonymous_variant 0.94
rpoC 767056 c.3687C>G synonymous_variant 0.94
rpoC 767059 c.3690T>C synonymous_variant 1.0
rpoC 767068 c.3699G>C synonymous_variant 0.94
rpoC 767074 p.Asp1235Glu missense_variant 0.91
rpoC 767083 p.Ile1238Met missense_variant 0.6
rpoC 767093 c.3724_3726delAGCinsTCG synonymous_variant 1.0
rpoC 767098 c.3729T>C synonymous_variant 1.0
rpoC 767104 c.3735C>G synonymous_variant 1.0
rpoC 767106 p.Asn1246Ile missense_variant 1.0
rpoC 767113 c.3744G>C synonymous_variant 1.0
rpoC 767119 c.3750A>G synonymous_variant 1.0
rpsL 781760 c.201T>C synonymous_variant 1.0
rpsL 781768 p.Glu70Val missense_variant 1.0
rpsL 781796 p.Met79Ile missense_variant 0.83
rpsL 781802 c.243G>C synonymous_variant 1.0
rpsL 781817 c.258G>T synonymous_variant 1.0
rpsL 781829 c.270G>C synonymous_variant 1.0
rpsL 781832 c.273T>G synonymous_variant 1.0
rpsL 781838 c.279G>C synonymous_variant 0.94
rpsL 781851 p.Ile98Val missense_variant 0.92
rpsL 781859 c.300T>C synonymous_variant 1.0
rpsL 781860 p.Ser101Ala missense_variant 0.83
rpsL 781865 c.306G>C synonymous_variant 1.0
rpsL 781868 c.309T>C synonymous_variant 1.0
rpsL 781877 c.318T>C synonymous_variant 1.0
rpsL 781880 c.321C>G synonymous_variant 1.0
rpsL 781892 c.333A>G synonymous_variant 1.0
rpsL 781898 c.339A>C synonymous_variant 1.0
rpsL 781905 p.Arg116Lys missense_variant 1.0
rpsL 781916 c.357T>G synonymous_variant 1.0
rplC 800654 c.-155T>C upstream_gene_variant 1.0
rplC 800667 c.-142_-140delTCGinsAGC upstream_gene_variant 1.0
rplC 800672 c.-137G>C upstream_gene_variant 1.0
rplC 800690 c.-119C>T upstream_gene_variant 1.0
rplC 800693 c.-116A>G upstream_gene_variant 1.0
rplC 800703 c.-106_-104delTTGinsCTC upstream_gene_variant 1.0
rplC 800733 c.-76A>G upstream_gene_variant 0.75
rplC 800738 c.-71T>C upstream_gene_variant 1.0
rplC 800742 c.-67G>T upstream_gene_variant 0.71
rplC 800753 c.-56C>G upstream_gene_variant 0.5
rplC 800780 c.-29C>G upstream_gene_variant 1.0
rrs 1471918 n.73A>T non_coding_transcript_exon_variant 1.0
rrs 1471923 n.78T>C non_coding_transcript_exon_variant 1.0
rrs 1471925 n.80T>C non_coding_transcript_exon_variant 1.0
rrs 1471932 n.87A>G non_coding_transcript_exon_variant 1.0
rrs 1471934 n.89A>G non_coding_transcript_exon_variant 1.0
rrs 1471938 n.93T>A non_coding_transcript_exon_variant 1.0
rrs 1471967 n.122G>A non_coding_transcript_exon_variant 0.44
rrs 1471969 n.124T>C non_coding_transcript_exon_variant 0.33
rrs 1471970 n.125G>A non_coding_transcript_exon_variant 0.33
rrs 1471972 n.127T>C non_coding_transcript_exon_variant 0.33
rrs 1471980 n.135G>C non_coding_transcript_exon_variant 0.33
rrs 1471985 n.140T>C non_coding_transcript_exon_variant 0.57
rrs 1471986 n.141C>T non_coding_transcript_exon_variant 0.57
rrs 1471998 n.153G>T non_coding_transcript_exon_variant 0.43
rrs 1472005 n.160T>G non_coding_transcript_exon_variant 0.5
rrs 1472023 n.178G>T non_coding_transcript_exon_variant 1.0
rrs 1472068 n.223T>G non_coding_transcript_exon_variant 1.0
rrs 1472075 n.230A>G non_coding_transcript_exon_variant 1.0
rrs 1472078 n.233C>T non_coding_transcript_exon_variant 0.98
rrs 1472108 n.263C>T non_coding_transcript_exon_variant 1.0
rrs 1472123 n.278A>T non_coding_transcript_exon_variant 0.97
rrs 1472148 n.303T>C non_coding_transcript_exon_variant 1.0
rrs 1472150 n.305T>A non_coding_transcript_exon_variant 1.0
rrs 1472172 n.327T>C non_coding_transcript_exon_variant 1.0
rrs 1472251 n.406G>A non_coding_transcript_exon_variant 1.0
rrs 1472286 n.441C>G non_coding_transcript_exon_variant 1.0
rrs 1472289 n.444T>G non_coding_transcript_exon_variant 1.0
rrs 1472290 n.445C>G non_coding_transcript_exon_variant 1.0
rrs 1472324 n.479G>C non_coding_transcript_exon_variant 1.0
rrs 1472325 n.480G>C non_coding_transcript_exon_variant 1.0
rrs 1472328 n.483G>C non_coding_transcript_exon_variant 1.0
rrs 1472338 n.493A>G non_coding_transcript_exon_variant 0.84
rrs 1472344 n.499C>T non_coding_transcript_exon_variant 0.79
rrs 1472379 n.534T>C non_coding_transcript_exon_variant 0.8
rrs 1472382 n.537G>A non_coding_transcript_exon_variant 0.8
rrs 1472400 n.555C>T non_coding_transcript_exon_variant 0.78
rrs 1472422 n.577T>C non_coding_transcript_exon_variant 1.0
rrs 1472426 n.581T>C non_coding_transcript_exon_variant 0.7
rrs 1472435 n.590T>C non_coding_transcript_exon_variant 1.0
rrs 1472438 n.593T>C non_coding_transcript_exon_variant 1.0
rrs 1472476 n.631A>G non_coding_transcript_exon_variant 1.0
rrs 1472494 n.649A>G non_coding_transcript_exon_variant 0.89
rrs 1472496 n.651T>G non_coding_transcript_exon_variant 0.86
rrs 1472498 n.653C>T non_coding_transcript_exon_variant 0.88
rrs 1472558 n.713G>A non_coding_transcript_exon_variant 0.91
rrs 1472569 n.724G>A non_coding_transcript_exon_variant 0.92
rrs 1472581 n.736A>C non_coding_transcript_exon_variant 0.93
rrs 1472583 n.738T>C non_coding_transcript_exon_variant 0.93
rrs 1472607 n.762G>A non_coding_transcript_exon_variant 0.93
rrs 1472655 n.810G>T non_coding_transcript_exon_variant 0.95
rrs 1472660 n.815T>C non_coding_transcript_exon_variant 1.0
rrs 1472673 n.828T>G non_coding_transcript_exon_variant 0.94
rrs 1472674 n.829T>C non_coding_transcript_exon_variant 0.94
rrs 1472677 n.832C>A non_coding_transcript_exon_variant 0.94
rrs 1472682 n.837T>A non_coding_transcript_exon_variant 1.0
rrs 1472683 n.838T>C non_coding_transcript_exon_variant 1.0
rrs 1472685 n.840G>A non_coding_transcript_exon_variant 0.94
rrs 1472687 n.842A>T non_coding_transcript_exon_variant 0.94
rrs 1472697 n.852T>C non_coding_transcript_exon_variant 0.92
rrs 1472714 n.869A>G non_coding_transcript_exon_variant 1.0
rrs 1472790 n.945T>C non_coding_transcript_exon_variant 0.96
rrs 1472824 n.979T>A non_coding_transcript_exon_variant 1.0
rrs 1472825 n.980G>A non_coding_transcript_exon_variant 1.0
rrs 1472828 n.983T>C non_coding_transcript_exon_variant 1.0
rrs 1472895 n.1050C>T non_coding_transcript_exon_variant 1.0
rrs 1472952 n.1107T>C non_coding_transcript_exon_variant 0.98
rrs 1472956 n.1111T>C non_coding_transcript_exon_variant 1.0
rrs 1472957 n.1112C>T non_coding_transcript_exon_variant 1.0
rrs 1472969 n.1124A>G non_coding_transcript_exon_variant 1.0
rrs 1472970 n.1125C>G non_coding_transcript_exon_variant 0.97
rrs 1472973 n.1128A>T non_coding_transcript_exon_variant 0.97
rrs 1472977 n.1132G>C non_coding_transcript_exon_variant 0.97
rrs 1472978 n.1133T>C non_coding_transcript_exon_variant 0.99
rrs 1472987 n.1142G>A non_coding_transcript_exon_variant 0.97
rrs 1472990 n.1145A>G non_coding_transcript_exon_variant 1.0
rrs 1473035 n.1190G>A non_coding_transcript_exon_variant 0.95
rrs 1473055 n.1210C>T non_coding_transcript_exon_variant 0.95
rrs 1473056 n.1211A>T non_coding_transcript_exon_variant 0.95
rrs 1473066 n.1221A>G non_coding_transcript_exon_variant 0.97
rrs 1473088 n.1243A>G non_coding_transcript_exon_variant 0.99
rrs 1473100 n.1255G>A non_coding_transcript_exon_variant 1.0
rrs 1473104 n.1259C>T non_coding_transcript_exon_variant 1.0
rrs 1473105 n.1260G>A non_coding_transcript_exon_variant 0.99
rrs 1473110 n.1265T>G non_coding_transcript_exon_variant 1.0
rrs 1473111 n.1266A>G non_coding_transcript_exon_variant 1.0
rrs 1473121 n.1276T>C non_coding_transcript_exon_variant 1.0
rrs 1473122 n.1277T>A non_coding_transcript_exon_variant 0.98
rrs 1473145 n.1300C>T non_coding_transcript_exon_variant 0.99
rrs 1473166 n.1321G>A non_coding_transcript_exon_variant 0.98
rrs 1473252 n.1407T>C non_coding_transcript_exon_variant 0.84
rrs 1473259 n.1414C>T non_coding_transcript_exon_variant 0.83
rrs 1473275 n.1430C>T non_coding_transcript_exon_variant 0.36
rrs 1473276 n.1431A>G non_coding_transcript_exon_variant 1.0
rrs 1473277 n.1432G>A non_coding_transcript_exon_variant 0.36
rrs 1473290 n.1445C>T non_coding_transcript_exon_variant 1.0
rrs 1473291 n.1446_1447insT non_coding_transcript_exon_variant 1.0
rrs 1473301 n.1456T>C non_coding_transcript_exon_variant 1.0
rrs 1473315 n.1470T>C non_coding_transcript_exon_variant 0.53
rrs 1473316 n.1471C>T non_coding_transcript_exon_variant 0.57
rrl 1473696 n.39T>C non_coding_transcript_exon_variant 1.0
rrl 1473698 n.41G>A non_coding_transcript_exon_variant 1.0
rrl 1473699 n.42A>G non_coding_transcript_exon_variant 1.0
rrl 1473717 n.60G>A non_coding_transcript_exon_variant 1.0
rrl 1473731 n.74T>A non_coding_transcript_exon_variant 1.0
rrl 1473756 n.99G>T non_coding_transcript_exon_variant 1.0
rrl 1473757 n.100T>G non_coding_transcript_exon_variant 1.0
rrl 1473758 n.101G>A non_coding_transcript_exon_variant 1.0
rrl 1473770 n.113T>G non_coding_transcript_exon_variant 1.0
rrl 1474166 n.509G>C non_coding_transcript_exon_variant 1.0
rrl 1474201 n.544T>C non_coding_transcript_exon_variant 0.98
rrl 1474202 n.545T>A non_coding_transcript_exon_variant 0.96
rrl 1474218 n.561T>A non_coding_transcript_exon_variant 0.98
rrl 1474249 n.592G>T non_coding_transcript_exon_variant 0.99
rrl 1474281 n.624A>G non_coding_transcript_exon_variant 1.0
rrl 1474291 n.635_645delTTCCTCTCCGG non_coding_transcript_exon_variant 1.0
rrl 1474305 n.648G>C non_coding_transcript_exon_variant 1.0
rrl 1474308 n.653_654delTG non_coding_transcript_exon_variant 1.0
rrl 1474316 n.659T>C non_coding_transcript_exon_variant 0.96
rrl 1474348 n.691C>T non_coding_transcript_exon_variant 1.0
rrl 1474351 n.694G>T non_coding_transcript_exon_variant 1.0
rrl 1474353 n.696A>C non_coding_transcript_exon_variant 1.0
rrl 1474354 n.697C>T non_coding_transcript_exon_variant 0.9
rrl 1474355 n.698A>C non_coding_transcript_exon_variant 0.9
rrl 1474356 n.699T>G non_coding_transcript_exon_variant 0.86
rrl 1474359 n.702C>G non_coding_transcript_exon_variant 0.9
rrl 1474362 n.705A>G non_coding_transcript_exon_variant 1.0
rrl 1474381 n.724T>A non_coding_transcript_exon_variant 0.81
rrl 1474387 n.730C>T non_coding_transcript_exon_variant 1.0
rrl 1474402 n.745T>C non_coding_transcript_exon_variant 0.97
rrl 1474409 n.756_776delACCCACACGCGCATACGCGCG non_coding_transcript_exon_variant 1.0
rrl 1474435 n.778G>T non_coding_transcript_exon_variant 1.0
rrl 1474437 n.781_782delAA non_coding_transcript_exon_variant 1.0
rrl 1474447 n.790G>A non_coding_transcript_exon_variant 1.0
rrl 1474450 n.793T>G non_coding_transcript_exon_variant 0.4
rrl 1474454 n.797G>A non_coding_transcript_exon_variant 1.0
rrl 1474466 n.809G>A non_coding_transcript_exon_variant 0.89
rrl 1474476 n.819C>G non_coding_transcript_exon_variant 0.89
rrl 1474483 n.826C>G non_coding_transcript_exon_variant 0.89
rrl 1474488 n.831G>T non_coding_transcript_exon_variant 0.93
rrl 1474497 n.840G>C non_coding_transcript_exon_variant 1.0
rrl 1474506 n.849C>G non_coding_transcript_exon_variant 1.0
rrl 1474516 n.859C>A non_coding_transcript_exon_variant 0.92
rrl 1474537 n.880G>A non_coding_transcript_exon_variant 1.0
rrl 1474551 n.894G>C non_coding_transcript_exon_variant 0.91
rrl 1474558 n.901G>T non_coding_transcript_exon_variant 0.91
rrl 1474583 n.926C>T non_coding_transcript_exon_variant 0.91
rrl 1474626 n.969T>C non_coding_transcript_exon_variant 1.0
rrl 1474627 n.970G>A non_coding_transcript_exon_variant 0.89
rrl 1474632 n.975G>T non_coding_transcript_exon_variant 1.0
rrl 1474636 n.979A>T non_coding_transcript_exon_variant 0.91
rrl 1474637 n.980C>T non_coding_transcript_exon_variant 0.91
rrl 1474638 n.981C>G non_coding_transcript_exon_variant 1.0
rrl 1474639 n.982G>C non_coding_transcript_exon_variant 1.0
rrl 1474663 n.1006C>T non_coding_transcript_exon_variant 0.93
rrl 1474664 n.1007G>A non_coding_transcript_exon_variant 0.93
rrl 1474676 n.1019T>C non_coding_transcript_exon_variant 1.0
rrl 1474709 n.1053_1056delTGGT non_coding_transcript_exon_variant 1.0
rrl 1474717 n.1060_1061insGACAT non_coding_transcript_exon_variant 1.0
rrl 1474734 n.1077G>T non_coding_transcript_exon_variant 1.0
rrl 1474749 n.1092C>T non_coding_transcript_exon_variant 1.0
rrl 1474753 n.1097delC non_coding_transcript_exon_variant 1.0
rrl 1474760 n.1103A>G non_coding_transcript_exon_variant 1.0
rrl 1474779 n.1122G>A non_coding_transcript_exon_variant 0.91
rrl 1474780 n.1123C>T non_coding_transcript_exon_variant 0.91
rrl 1474794 n.1137C>T non_coding_transcript_exon_variant 1.0
rrl 1474806 n.1149A>C non_coding_transcript_exon_variant 0.93
rrl 1474823 n.1166C>G non_coding_transcript_exon_variant 1.0
rrl 1474827 n.1170C>T non_coding_transcript_exon_variant 0.93
rrl 1474831 n.1174A>C non_coding_transcript_exon_variant 0.94
rrl 1474904 n.1247G>C non_coding_transcript_exon_variant 1.0
rrl 1474905 n.1248T>C non_coding_transcript_exon_variant 0.95
rrl 1474913 n.1256T>C non_coding_transcript_exon_variant 1.0
rrl 1474932 n.1275C>T non_coding_transcript_exon_variant 0.98
rrl 1474948 n.1291C>T non_coding_transcript_exon_variant 0.95
rrl 1475081 n.1424C>T non_coding_transcript_exon_variant 1.0
rrl 1475090 n.1433A>T non_coding_transcript_exon_variant 1.0
rrl 1475104 n.1447T>A non_coding_transcript_exon_variant 0.93
rrl 1475113 n.1456C>T non_coding_transcript_exon_variant 1.0
rrl 1475114 n.1457C>T non_coding_transcript_exon_variant 1.0
rrl 1475116 n.1459G>A non_coding_transcript_exon_variant 1.0
rrl 1475124 n.1467A>T non_coding_transcript_exon_variant 0.93
rrl 1475129 n.1472G>A non_coding_transcript_exon_variant 0.93
rrl 1475174 n.1517C>G non_coding_transcript_exon_variant 0.95
rrl 1475176 n.1519G>A non_coding_transcript_exon_variant 0.95
rrl 1475187 n.1530C>T non_coding_transcript_exon_variant 0.83
rrl 1475189 n.1532G>C non_coding_transcript_exon_variant 0.75
rrl 1475429 n.1772G>A non_coding_transcript_exon_variant 1.0
rrl 1475443 n.1786G>A non_coding_transcript_exon_variant 1.0
rrl 1475452 n.1795C>A non_coding_transcript_exon_variant 1.0
rrl 1475460 n.1803A>G non_coding_transcript_exon_variant 1.0
rrl 1475480 n.1823A>T non_coding_transcript_exon_variant 1.0
rrl 1475481 n.1824C>T non_coding_transcript_exon_variant 1.0
rrl 1475482 n.1825A>T non_coding_transcript_exon_variant 1.0
rrl 1475488 n.1831G>C non_coding_transcript_exon_variant 0.33
rrl 1475508 n.1851A>T non_coding_transcript_exon_variant 0.89
rrl 1475526 n.1869C>A non_coding_transcript_exon_variant 1.0
rrl 1475538 n.1881T>A non_coding_transcript_exon_variant 1.0
rrl 1475539 n.1882A>T non_coding_transcript_exon_variant 1.0
rrl 1475544 n.1887A>C non_coding_transcript_exon_variant 0.91
rrl 1475545 n.1888T>G non_coding_transcript_exon_variant 0.91
rrl 1475548 n.1891C>T non_coding_transcript_exon_variant 0.91
rrl 1475549 n.1892T>C non_coding_transcript_exon_variant 0.91
rrl 1475550 n.1893A>G non_coding_transcript_exon_variant 1.0
rrl 1475599 n.1942A>G non_coding_transcript_exon_variant 1.0
rrl 1475602 n.1945G>C non_coding_transcript_exon_variant 1.0
rrl 1475629 n.1973dupA non_coding_transcript_exon_variant 1.0
rrl 1475642 n.1985T>C non_coding_transcript_exon_variant 1.0
rrl 1475649 n.1992A>G non_coding_transcript_exon_variant 1.0
rrl 1475655 n.1998T>G non_coding_transcript_exon_variant 1.0
rrl 1475659 n.2002G>A non_coding_transcript_exon_variant 1.0
rrl 1475752 n.2095C>G non_coding_transcript_exon_variant 0.94
rrl 1475753 n.2096C>G non_coding_transcript_exon_variant 1.0
rrl 1475756 n.2099T>C non_coding_transcript_exon_variant 0.93
rrl 1475766 n.2109G>T non_coding_transcript_exon_variant 1.0
rrl 1475775 n.2118G>C non_coding_transcript_exon_variant 1.0
rrl 1475776 n.2119G>C non_coding_transcript_exon_variant 0.93
rrl 1475883 n.2226A>C non_coding_transcript_exon_variant 1.0
rrl 1475884 n.2227A>G non_coding_transcript_exon_variant 1.0
rrl 1475896 n.2239A>G non_coding_transcript_exon_variant 0.95
rrl 1475897 n.2240T>C non_coding_transcript_exon_variant 1.0
rrl 1475898 n.2241A>G non_coding_transcript_exon_variant 0.95
rrl 1475899 n.2242G>A non_coding_transcript_exon_variant 0.93
rrl 1475900 n.2243A>G non_coding_transcript_exon_variant 0.95
rrl 1475943 n.2286G>A non_coding_transcript_exon_variant 0.96
rrl 1475952 n.2295A>G non_coding_transcript_exon_variant 0.95
rrl 1475970 n.2313C>T non_coding_transcript_exon_variant 0.92
rrl 1475975 n.2318C>T non_coding_transcript_exon_variant 1.0
rrl 1475977 n.2320A>G non_coding_transcript_exon_variant 1.0
rrl 1475988 n.2331A>G non_coding_transcript_exon_variant 1.0
rrl 1475997 n.2340A>G non_coding_transcript_exon_variant 1.0
rrl 1475998 n.2341C>T non_coding_transcript_exon_variant 0.95
rrl 1476001 n.2344T>C non_coding_transcript_exon_variant 0.96
rrl 1476033 n.2376T>C non_coding_transcript_exon_variant 1.0
rrl 1476034 n.2377C>G non_coding_transcript_exon_variant 1.0
rrl 1476036 n.2379A>C non_coding_transcript_exon_variant 0.88
rrl 1476043 n.2386T>G non_coding_transcript_exon_variant 0.88
rrl 1476045 n.2388G>C non_coding_transcript_exon_variant 1.0
rrl 1476049 n.2392C>T non_coding_transcript_exon_variant 1.0
rrl 1476056 n.2399G>A non_coding_transcript_exon_variant 0.78
rrl 1476058 n.2401T>C non_coding_transcript_exon_variant 0.7
rrl 1476086 n.2429G>A non_coding_transcript_exon_variant 1.0
rrl 1476099 n.2442A>G non_coding_transcript_exon_variant 1.0
rrl 1476103 n.2446C>A non_coding_transcript_exon_variant 1.0
rrl 1476105 n.2450delA non_coding_transcript_exon_variant 1.0
rrl 1476110 n.2453G>T non_coding_transcript_exon_variant 1.0
rrl 1476115 n.2458T>C non_coding_transcript_exon_variant 1.0
rrl 1476131 n.2474C>T non_coding_transcript_exon_variant 1.0
rrl 1476160 n.2503T>C non_coding_transcript_exon_variant 1.0
rrl 1476179 n.2522C>T non_coding_transcript_exon_variant 0.96
rrl 1476194 n.2537A>G non_coding_transcript_exon_variant 1.0
rrl 1476200 n.2543A>T non_coding_transcript_exon_variant 1.0
rrl 1476201 n.2544C>T non_coding_transcript_exon_variant 1.0
rrl 1476214 n.2557G>T non_coding_transcript_exon_variant 1.0
rrl 1476221 n.2564T>C non_coding_transcript_exon_variant 1.0
rrl 1476224 n.2567A>G non_coding_transcript_exon_variant 1.0
rrl 1476245 n.2588C>T non_coding_transcript_exon_variant 1.0
rrl 1476251 n.2594T>C non_coding_transcript_exon_variant 0.95
rrl 1476252 n.2595T>G non_coding_transcript_exon_variant 1.0
rrl 1476256 n.2599A>G non_coding_transcript_exon_variant 1.0
rrl 1476260 n.2603A>G non_coding_transcript_exon_variant 1.0
rrl 1476279 n.2622G>A non_coding_transcript_exon_variant 0.85
rrl 1476281 n.2624T>C non_coding_transcript_exon_variant 1.0
rrl 1476297 n.2640C>G non_coding_transcript_exon_variant 1.0
rrl 1476298 n.2641C>G non_coding_transcript_exon_variant 1.0
rrl 1476300 n.2643G>A non_coding_transcript_exon_variant 1.0
rrl 1476309 n.2652G>C non_coding_transcript_exon_variant 1.0
rrl 1476312 n.2655T>C non_coding_transcript_exon_variant 0.33
rrl 1476359 n.2702C>G non_coding_transcript_exon_variant 0.92
rrl 1476381 n.2724G>C non_coding_transcript_exon_variant 0.94
rrl 1476428 n.2771C>T non_coding_transcript_exon_variant 1.0
rrl 1476466 n.2809C>T non_coding_transcript_exon_variant 0.95
rrl 1476506 n.2849T>C non_coding_transcript_exon_variant 0.94
rrl 1476515 n.2858C>T non_coding_transcript_exon_variant 0.91
rrl 1476523 n.2866T>C non_coding_transcript_exon_variant 0.87
rrl 1476524 n.2867C>A non_coding_transcript_exon_variant 0.98
rrl 1476525 n.2868A>G non_coding_transcript_exon_variant 0.84
rrl 1476536 n.2879G>A non_coding_transcript_exon_variant 0.87
rrl 1476538 n.2881A>G non_coding_transcript_exon_variant 0.87
rrl 1476539 n.2882A>G non_coding_transcript_exon_variant 1.0
rrl 1476540 n.2883C>G non_coding_transcript_exon_variant 1.0
rrl 1476584 n.2927C>T non_coding_transcript_exon_variant 1.0
rrl 1476585 n.2928A>G non_coding_transcript_exon_variant 1.0
rrl 1476594 n.2937C>T non_coding_transcript_exon_variant 1.0
rrl 1476603 n.2946G>A non_coding_transcript_exon_variant 1.0
rrl 1476608 n.2951C>G non_coding_transcript_exon_variant 1.0
rrl 1476614 n.2957A>T non_coding_transcript_exon_variant 1.0
rrl 1476619 n.2962C>T non_coding_transcript_exon_variant 1.0
rrl 1476628 n.2971T>A non_coding_transcript_exon_variant 1.0
rrl 1476629 n.2972C>A non_coding_transcript_exon_variant 1.0
rrl 1476630 n.2973A>G non_coding_transcript_exon_variant 1.0
rrl 1476661 n.3004A>G non_coding_transcript_exon_variant 1.0
rrl 1476665 n.3008T>G non_coding_transcript_exon_variant 1.0
rrl 1476668 n.3011C>T non_coding_transcript_exon_variant 1.0
rrl 1476675 n.3018C>G non_coding_transcript_exon_variant 1.0
rrl 1476683 n.3026T>C non_coding_transcript_exon_variant 1.0
rpsA 1833667 c.126C>G synonymous_variant 1.0
rpsA 1833676 c.135A>G synonymous_variant 1.0
rpsA 1833679 c.138G>C synonymous_variant 1.0
rpsA 1833682 c.141C>T synonymous_variant 0.29
rpsA 1833685 c.144G>C synonymous_variant 1.0
rpsA 1833694 c.153G>C synonymous_variant 1.0
rpsA 1833697 c.156C>T synonymous_variant 0.44
rpsA 1833709 c.168C>T synonymous_variant 1.0
rpsA 1833718 c.177C>G synonymous_variant 0.44
rpsA 1833721 c.180A>G synonymous_variant 0.44
rpsA 1833727 c.186G>C synonymous_variant 0.56
rpsA 1833733 c.192C>T synonymous_variant 1.0
rpsA 1833734 p.Ala65Ser missense_variant 1.0
rpsA 1833739 c.198C>T synonymous_variant 1.0
rpsA 1833742 c.201A>G synonymous_variant 1.0
rpsA 1833745 c.204G>C synonymous_variant 1.0
rpsA 1833781 c.240T>C synonymous_variant 1.0
rpsA 1833787 c.246C>G synonymous_variant 1.0
rpsA 1833790 c.249T>C synonymous_variant 1.0
rpsA 1833793 c.252C>T synonymous_variant 1.0
rpsA 1833811 c.270G>C synonymous_variant 1.0
rpsA 1833829 c.288A>G synonymous_variant 1.0
rpsA 1833847 c.306C>G synonymous_variant 1.0
rpsA 1833850 c.309C>G synonymous_variant 0.33
rpsA 1833856 c.315A>G synonymous_variant 1.0
rpsA 1833862 c.321G>C synonymous_variant 1.0
rpsA 1833874 c.333T>C synonymous_variant 0.81
rpsA 1833886 c.345C>G synonymous_variant 0.83
rpsA 1833893 p.Ala118Lys missense_variant 0.83
rpsA 1833896 p.Leu119Ile missense_variant 0.83
rpsA 1833905 p.Lys122Glu missense_variant 0.86
rpsA 1833912 p.Glu124Gly missense_variant 0.86
rpsA 1833915 p.Ala125Val missense_variant 0.86
rpsA 1833921 p.Lys127Thr missense_variant 0.86
rpsA 1833928 c.387G>C synonymous_variant 1.0
rpsA 1833955 c.414G>C synonymous_variant 1.0
rpsA 1833970 c.429G>T synonymous_variant 1.0
rpsA 1833973 c.432G>T synonymous_variant 1.0
rpsA 1833976 c.435C>T synonymous_variant 1.0
rpsA 1833979 c.438T>C synonymous_variant 1.0
rpsA 1833985 c.444G>C synonymous_variant 1.0
rpsA 1833994 c.453G>C synonymous_variant 1.0
rpsA 1833997 c.456G>C synonymous_variant 1.0
rpsA 1834009 c.468C>T synonymous_variant 1.0
rpsA 1834012 c.471G>A synonymous_variant 1.0
rpsA 1834015 c.474G>C synonymous_variant 1.0
rpsA 1834024 c.483G>C synonymous_variant 1.0
rpsA 1834025 p.Gln162Ala missense_variant 1.0
rpsA 1834030 c.489C>G synonymous_variant 1.0
rpsA 1834034 p.Ile165Val missense_variant 1.0
rpsA 1834069 c.528G>C synonymous_variant 1.0
rpsA 1834093 c.552G>C synonymous_variant 1.0
rpsA 1834099 c.558C>G synonymous_variant 1.0
rpsA 1834102 c.561T>C synonymous_variant 1.0
rpsA 1834105 c.564C>T synonymous_variant 1.0
rpsA 1834114 c.573G>C synonymous_variant 1.0
rpsA 1834123 c.582C>G synonymous_variant 1.0
rpsA 1834135 c.594G>C synonymous_variant 1.0
rpsA 1834180 p.Lys213Asn missense_variant 1.0
rpsA 1834189 c.648G>C synonymous_variant 1.0
rpsA 1834210 c.669C>T synonymous_variant 1.0
rpsA 1834219 c.678C>G synonymous_variant 1.0
rpsA 1834222 c.681T>C synonymous_variant 1.0
rpsA 1834231 c.690T>C synonymous_variant 1.0
rpsA 1834234 c.693G>C synonymous_variant 1.0
rpsA 1834249 c.708T>C synonymous_variant 1.0
rpsA 1834255 c.714C>G synonymous_variant 0.95
rpsA 1834261 c.720A>G synonymous_variant 1.0
rpsA 1834264 c.723G>C synonymous_variant 1.0
rpsA 1834294 c.753G>C synonymous_variant 1.0
rpsA 1834298 p.Gln253Glu missense_variant 1.0
rpsA 1834303 c.762T>C synonymous_variant 1.0
rpsA 1834306 c.765T>C synonymous_variant 1.0
rpsA 1834307 p.Asp256Gln missense_variant 1.0
rpsA 1834340 p.Met267His missense_variant 1.0
rpsA 1834348 c.807T>C synonymous_variant 1.0
rpsA 1834354 c.813G>T synonymous_variant 1.0
rpsA 1834357 c.816T>C synonymous_variant 1.0
rpsA 1834360 c.819G>C synonymous_variant 1.0
rpsA 1834361 c.820T>C synonymous_variant 1.0
rpsA 1834366 c.825A>G synonymous_variant 1.0
rpsA 1834369 c.828C>G synonymous_variant 1.0
rpsA 1834378 c.837T>G synonymous_variant 1.0
rpsA 1834384 c.843A>G synonymous_variant 1.0
rpsA 1834395 p.Arg285Gln missense_variant 0.78
rpsA 1834397 p.His286Thr missense_variant 0.78
rpsA 1834411 c.870T>G synonymous_variant 1.0
rpsA 1834417 c.876G>C synonymous_variant 0.89
rpsA 1834423 c.882G>C synonymous_variant 1.0
rpsA 1834427 p.Ile296Val missense_variant 1.0
rpsA 1834435 c.894G>C synonymous_variant 1.0
rpsA 1834438 c.897C>A synonymous_variant 1.0
rpsA 1834447 c.906C>G synonymous_variant 1.0
rpsA 1834451 c.910_912delTTGinsCTC synonymous_variant 1.0
rpsA 1834456 c.915T>G synonymous_variant 1.0
rpsA 1834468 c.927A>G synonymous_variant 1.0
rpsA 1834474 c.933C>G synonymous_variant 1.0
rpsA 1834486 p.Glu315Asp missense_variant 1.0
rpsA 1834489 c.948T>C synonymous_variant 1.0
rpsA 1834501 c.960G>C synonymous_variant 0.5
rpsA 1834513 c.972C>G synonymous_variant 0.5
rpsA 1834524 p.Glu328Val missense_variant 0.5
rpsA 1834528 c.987T>C synonymous_variant 1.0
rpsA 1834534 c.993C>G synonymous_variant 0.5
rpsA 1834538 p.Val333Leu missense_variant 0.5
rpsA 1834543 c.1002C>G synonymous_variant 0.5
rpsA 1834546 c.1005T>C synonymous_variant 1.0
rpsA 1834552 c.1011G>T synonymous_variant 1.0
rpsA 1834555 c.1014T>G synonymous_variant 1.0
rpsA 1834557 p.Ala339Gly missense_variant 1.0
rpsA 1834570 c.1029C>T synonymous_variant 1.0
rpsA 1834574 p.Met345Leu missense_variant 1.0
rpsA 1834733 p.Ala398Pro missense_variant 1.0
rpsA 1834738 c.1197A>G synonymous_variant 1.0
rpsA 1834753 c.1212T>C synonymous_variant 1.0
rpoA 3877803 c.705G>C synonymous_variant 1.0
rpoA 3877818 c.690A>G synonymous_variant 1.0
rpoA 3877833 c.675C>G synonymous_variant 1.0
rpoA 3877836 c.672A>G synonymous_variant 1.0
rpoA 3877839 c.669G>C synonymous_variant 1.0
rpoA 3877842 c.666A>C synonymous_variant 1.0
rpoA 3877845 c.663G>C synonymous_variant 1.0
rpoA 3877848 c.660C>T synonymous_variant 1.0
rpoA 3877856 c.652T>C synonymous_variant 1.0
rpoA 3877863 c.645G>C synonymous_variant 1.0
rpoA 3878358 c.150C>T synonymous_variant 1.0
rpoA 3878361 c.147G>T synonymous_variant 1.0
rpoA 3878364 c.144A>C synonymous_variant 1.0
rpoA 3878391 c.117T>C synonymous_variant 1.0
rpoA 3878406 c.102G>C synonymous_variant 1.0
rpoA 3878415 c.93C>G synonymous_variant 1.0
rpoA 3878421 c.87A>C synonymous_variant 1.0
clpC1 4038773 c.1932T>C synonymous_variant 1.0
clpC1 4038791 c.1914G>C synonymous_variant 1.0
clpC1 4038795 p.Ser637Thr missense_variant 1.0
clpC1 4038812 c.1893T>C synonymous_variant 1.0
clpC1 4038815 c.1890G>A synonymous_variant 1.0
clpC1 4038826 p.Ile627Val missense_variant 0.73
clpC1 4038839 c.1866G>C synonymous_variant 1.0
clpC1 4038872 c.1833C>G synonymous_variant 0.94
clpC1 4038878 c.1827A>G synonymous_variant 1.0
clpC1 4038890 p.Glu605Asp missense_variant 1.0
clpC1 4038905 c.1800A>G synonymous_variant 1.0
clpC1 4038911 c.1794G>C synonymous_variant 1.0
clpC1 4038916 p.Ala597Ser missense_variant 0.91
clpC1 4038923 c.1782A>G synonymous_variant 1.0
clpC1 4038933 p.Ala591Val missense_variant 0.83
clpC1 4038939 p.Phe589Tyr missense_variant 0.5
clpC1 4038953 c.1752A>G synonymous_variant 1.0
clpC1 4038956 c.1749T>C synonymous_variant 1.0
clpC1 4038965 c.1740T>C synonymous_variant 1.0
clpC1 4038997 c.1708T>C synonymous_variant 1.0
clpC1 4039004 c.1701C>G synonymous_variant 1.0
clpC1 4039007 c.1698G>C synonymous_variant 1.0
clpC1 4039022 c.1683A>G synonymous_variant 1.0
clpC1 4039073 c.1632C>T synonymous_variant 1.0
clpC1 4039079 c.1626C>G synonymous_variant 1.0
clpC1 4039082 c.1623C>T synonymous_variant 1.0
clpC1 4039085 c.1620A>G synonymous_variant 1.0
clpC1 4039091 c.1614G>C synonymous_variant 1.0
clpC1 4039097 c.1608G>C synonymous_variant 1.0
clpC1 4039106 c.1599G>T synonymous_variant 1.0
clpC1 4039112 c.1593C>G synonymous_variant 1.0
clpC1 4039121 c.1584T>C synonymous_variant 1.0
clpC1 4039142 c.1563A>G synonymous_variant 1.0
clpC1 4039145 c.1560G>C synonymous_variant 1.0
clpC1 4039319 c.1386T>C synonymous_variant 1.0
clpC1 4039328 c.1377A>G synonymous_variant 1.0
clpC1 4039334 c.1371G>C synonymous_variant 1.0
clpC1 4039484 c.1221T>C synonymous_variant 1.0
clpC1 4039517 c.1188C>G synonymous_variant 1.0
clpC1 4039524 p.Phe394Tyr missense_variant 1.0
clpC1 4039541 c.1164C>G synonymous_variant 0.75
clpC1 4039592 c.1113G>C synonymous_variant 1.0
clpC1 4039610 c.1095G>C synonymous_variant 1.0
clpC1 4039616 c.1089G>C synonymous_variant 1.0
clpC1 4039642 p.Thr355Ala missense_variant 0.94
clpC1 4039649 p.Val352Leu missense_variant 1.0
clpC1 4039654 p.Thr351Ser missense_variant 0.94
clpC1 4039661 p.Gly348Asn missense_variant 0.94
clpC1 4039664 c.1041G>C synonymous_variant 1.0
clpC1 4039670 p.Val345Ile missense_variant 0.94
clpC1 4039694 c.1011G>C synonymous_variant 1.0
clpC1 4039697 p.Ala336Pro missense_variant 0.87
clpC1 4039711 p.Ile332Val missense_variant 0.83
clpC1 4039724 c.981A>G synonymous_variant 1.0
clpC1 4039733 c.972G>C synonymous_variant 1.0
clpC1 4039739 c.966C>G synonymous_variant 0.75
clpC1 4039748 c.957G>C synonymous_variant 1.0
clpC1 4039751 c.954A>G synonymous_variant 1.0
clpC1 4039757 c.948A>G synonymous_variant 1.0
clpC1 4039760 c.945T>C synonymous_variant 0.67
clpC1 4039766 c.939T>C synonymous_variant 1.0
clpC1 4039793 c.912C>G synonymous_variant 1.0
clpC1 4039817 c.888A>T synonymous_variant 1.0
clpC1 4039820 c.885T>A synonymous_variant 1.0
clpC1 4039829 c.874_876delTTGinsCTC synonymous_variant 1.0
clpC1 4039838 p.Leu289Ile missense_variant 0.95
clpC1 4039850 c.855T>C synonymous_variant 1.0
clpC1 4039865 c.840T>C synonymous_variant 1.0
clpC1 4039875 p.Asn277Arg missense_variant 0.96
clpC1 4039898 c.807C>G synonymous_variant 1.0
clpC1 4039904 c.801A>G synonymous_variant 1.0
clpC1 4039929 c.775_776delAGinsTC synonymous_variant 0.94
clpC1 4039931 c.774T>C synonymous_variant 1.0
clpC1 4039937 c.768G>C synonymous_variant 1.0
clpC1 4039943 p.Ser254Ala missense_variant 0.97
clpC1 4039946 c.759A>C synonymous_variant 1.0
clpC1 4039949 c.756G>C synonymous_variant 0.97
clpC1 4039952 c.753T>C synonymous_variant 1.0
clpC1 4039979 c.726C>G synonymous_variant 0.98
clpC1 4039994 p.Glu237Asp missense_variant 0.97
clpC1 4040001 p.His235Arg missense_variant 0.96
clpC1 4040010 p.Ala232Asp missense_variant 1.0
clpC1 4040015 c.690G>C synonymous_variant 1.0
clpC1 4040018 c.687G>C synonymous_variant 1.0
clpC1 4040021 c.684A>C synonymous_variant 1.0
clpC1 4040024 c.681A>G synonymous_variant 1.0
clpC1 4040033 c.672G>C synonymous_variant 1.0
clpC1 4040036 c.669C>G synonymous_variant 1.0
clpC1 4040051 c.654C>A synonymous_variant 1.0
clpC1 4040069 c.636G>C synonymous_variant 1.0
clpC1 4040087 c.618G>C synonymous_variant 1.0
clpC1 4040090 c.613_615delTCTinsAGC synonymous_variant 1.0
clpC1 4040093 c.612C>G synonymous_variant 1.0
clpC1 4040108 c.597G>C synonymous_variant 1.0
clpC1 4040117 c.588A>G synonymous_variant 1.0
clpC1 4040121 p.Lys195Thr missense_variant 0.92
clpC1 4040124 p.Glu194Ser missense_variant 1.0
clpC1 4040144 c.561G>C synonymous_variant 1.0
clpC1 4040147 c.558A>G synonymous_variant 1.0
clpC1 4040153 c.552A>G synonymous_variant 0.83
clpC1 4040156 p.Met183Arg missense_variant 0.83
clpC1 4040162 c.543G>C synonymous_variant 1.0
clpC1 4040166 p.Ala180Gln missense_variant 1.0
clpC1 4040168 c.537G>C synonymous_variant 1.0
clpC1 4040195 c.510G>C synonymous_variant 1.0
clpC1 4040291 c.414G>C synonymous_variant 1.0
clpC1 4040307 p.Arg133Lys missense_variant 1.0
clpC1 4040310 p.Thr132Asn missense_variant 1.0
clpC1 4040315 p.Glu130Asp missense_variant 1.0
clpC1 4040326 p.Leu127Met missense_variant 1.0
clpC1 4040330 p.Val125Thr missense_variant 1.0
clpC1 4040333 c.372G>C synonymous_variant 1.0
clpC1 4040348 c.357G>C synonymous_variant 1.0
clpC1 4040354 c.351A>G synonymous_variant 1.0
clpC1 4040357 c.348T>C synonymous_variant 1.0
clpC1 4040363 c.342A>C synonymous_variant 1.0
clpC1 4040606 c.99T>C synonymous_variant 1.0
clpC1 4040645 c.60C>A synonymous_variant 1.0
clpC1 4040660 c.45G>T synonymous_variant 1.0
clpC1 4040669 c.36C>G synonymous_variant 1.0
clpC1 4040674 c.31A>C synonymous_variant 1.0
clpC1 4040675 c.30C>T synonymous_variant 1.0
clpC1 4040681 c.24T>A synonymous_variant 1.0
clpC1 4040690 c.15T>C synonymous_variant 1.0
clpC1 4040695 c.10C>A synonymous_variant 1.0
clpC1 4040696 c.9A>G synonymous_variant 1.0
clpC1 4040706 c.-2C>A upstream_gene_variant 1.0
panD 4044195 c.87T>C synonymous_variant 1.0
panD 4044204 p.Val26Ile missense_variant 1.0
panD 4044228 c.54C>G synonymous_variant 1.0
panD 4044249 c.33C>T synonymous_variant 1.0