EBG00000313339 - n.894G>C
Drug resistance types
18 Sensitive
21 RR-TB
18 HR-TB
33 MDR-TB
12 Pre-XDR-TB
0 XDR-TB
59 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 10 |
| lineage2.2.1 | 18 |
| lineage4.4.1.1 | 5 |
| lineage4.1.2.1 | 19 |
| lineage4.4.1 | 1 |
| lineage4.3.4.2.1 | 6 |
| lineage1.2.2.2 | 1 |
| lineage2.2.2 | 3 |
| lineage4.6.2.2 | 2 |
| lineage4.1.1.3 | 3 |
| lineage4.6.1.2 | 5 |
| lineage1.1.1 | 1 |
| lineage4.7 | 3 |
| lineage4.3.4.2 | 1 |
| 6 | |
| lineage6.3.1 | 1 |
| lineage4.9 | 32 |
| lineage4.3.3 | 2 |
| lineage1.1.3.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage3 | 5 |
| lineage2.1 | 1 |
| lineage3.1.3 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.1.2 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.1 | 1 |
| lineage4 | 4 |
| lineage4.6.1.1 | 1 |
| lineage4.3.2.1 | 2 |
| lineage4.6 | 1 |
| lineage1.1.1.1 | 2 |
| La1.7.X-unk4 | 1 |
| lineage3.1.1 | 2 |
| La1.3 | 3 |
| lineage1.1.3.3 | 1 |
| lineage4.4.2 | 2 |
| lineage6 | 1 |
| lineage1.2.1.2 | 2 |
| lineage4.4.1.1.1 | 1 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| La1.6 | 1 |
| lineage4.2.1 | 1 |
| La2 | 1 |
| lineage4.5 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 161 |
Geographic prevalence
Country level data for this variant is available for 13 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4815193 | MDR-TB | lineage4.8 | None | ERR4815236 | Sensitive | lineage2.2.1 | gb | ERR4815257 | HR-TB | lineage4.4.1.1 | None | ERR4814438 | HR-TB | lineage4.1.2.1 | gb | ERR4815065 | Other | lineage4.1.2.1 | gb | ERR4815488 | HR-TB | lineage4.4.1 | None | ERR176580 | Sensitive | lineage4.3.4.2.1 | None | ERR4815517 | Other | lineage1.2.2.2 | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR4816079 | Sensitive | lineage4.1.2.1 | None | SRR4033549 | HR-TB | lineage2.2.2 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR2027285 | MDR-TB | lineage4.6.2.2 | None | ERR4817194 | Other | lineage4.1.2.1 | None | ERR4816755 | Other | lineage4.1.1.3 | None | ERR4817234 | Other | lineage4.1.1.3 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4816907 | Other | lineage1.1.1 | None | ERR4817976 | HR-TB | lineage4.1.2.1 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4817795 | Other | lineage4.7 | gb | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR2510820 | Other | lineage4.8 | None | ERR245790 | Sensitive | None | ERR4819096 | Other | lineage4.4.1.1 | None | ERR4818904 | Other | lineage4.8 | None | ERR4818440 | Other | lineage6.3.1 | None | ERR2513710 | HR-TB | lineage4.1.2.1 | gb | ERR4819383 | RR-TB | lineage4.9 | None | ERR2514555 | Sensitive | lineage4.3.3 | gb | ERR4819423 | Other | lineage4.6.2.2 | None | ERR4820503 | Other | lineage2.2.1 | None | ERR4819784 | Other | lineage4.1.2.1 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR2514708 | Sensitive | lineage4.1.2.1 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR4819910 | Other | lineage4.9 | None | ERR4820820 | Other | lineage1.2.1.1 | gb | ERR4820075 | Other | lineage4.1.2.1 | None | ERR4820829 | Other | lineage4.8 | None | ERR4820030 | Other | lineage4.9 | None | ERR4821054 | Other | lineage3 | None | ERR4821799 | Other | lineage2.2.1 | None | ERR4821811 | RR-TB | lineage4.9 | None | SRR5709926 | MDR-TB | lineage2.2.1 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | ERR4821372 | Other | lineage4.1.2.1 | None | ERR4821477 | Other | lineage4.8 | None | ERR4821712 | HR-TB | None | ERR4821119 | Other | lineage4.4.1.1 | None | ERR4821214 | RR-TB | None | ERR4821286 | Other | lineage4.8 | None | ERR4822173 | Other | lineage4.7 | None | ERR4821572 | Other | lineage2.1 | None | SRR6045713 | Sensitive | lineage3.1.3 | gb | ERR4829917 | HR-TB | lineage4.7 | it | SRR5818586 | RR-TB | lineage4.2.2.2 | None | ERR4829907 | HR-TB | lineage4.1.2.1 | it | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR4829873 | Sensitive | lineage4.4.1.1 | it | SRR6397640 | Other | lineage4.2.1.1 | None | ERR4830868 | MDR-TB | lineage4.4.1.1 | sz | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | ERR3275996 | HR-TB | lineage4.3.4.1 | nl | SRR7131122 | Other | lineage2.2.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR6982246 | Sensitive | lineage4 | None | SRR7131071 | Sensitive | lineage4.1.2.1 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR7585400 | MDR-TB | lineage3 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR9971168 | Other | lineage4.3.2.1 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR8649119 | Other | lineage4.6 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971113 | Other | lineage2.2.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR7765062 | Pre-XDR-TB | lineage4.1.2.1 | None | DRR184932 | Other | lineage2.2.1 | None | DRR184629 | Other | lineage2.2.1 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | DRR185024 | Other | lineage2.2.2 | None | DRR185000 | Other | lineage1.1.1.1 | None | ERR10796559 | Other | lineage4.9 | None | DRR185048 | Other | lineage2.2.1 | None | ERR10796630 | HR-TB | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283008 | Other | lineage4.9 | None | ERR3283043 | Other | lineage4.9 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3797063 | HR-TB | None | ERR3283051 | Other | lineage4.9 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | ERR4769423 | Other | La1.3 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4769453 | Other | La1.3 | None | ERR4769436 | Other | La1.3 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | ERR4798769 | Other | lineage1.1.3.3 | None | ERR4811101 | Other | lineage4.4.2 | None | ERR9787033 | Sensitive | lineage6 | None | ERR9992784 | Pre-XDR-TB | lineage2.2.2 | None | SRR10214505 | Sensitive | lineage1.2.1.2 | None | SRR10315641 | MDR-TB | lineage4.4.1.1.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1062928 | RR-TB | lineage4 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR10993951 | RR-TB | La1.6 | None | SRR11342634 | MDR-TB | lineage4.8 | None | SRR1180440 | Other | lineage4.9 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1173170 | Other | lineage4.9 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1173770 | Other | lineage4.9 | None | SRR1140736 | RR-TB | None | SRR1180446 | Other | lineage4.9 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR14088360 | Sensitive | lineage3 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR13888750 | Other | La2 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR18002991 | Pre-XDR-TB | lineage2.2.1 | None | SRR16157123 | Other | lineage4.9 | None | SRR19303914 | Sensitive | lineage4.5 | None | SRR21727888 | Other | lineage1.2.1.2 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR22424765 | MDR-TB | lineage4 | None |
|---|
