EBG00000313339 - n.894G>C
Drug resistance types
115 Sensitive
20 RR-TB
6 HR-TB
18 MDR-TB
3 Pre-XDR-TB
1 XDR-TB
161 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 256 |
| lineage1.1.3.1 | 2 |
| lineage4.6.1.2 | 4 |
| lineage4.3.4.1 | 2 |
| lineage4.8 | 4 |
| lineage4.4.2 | 2 |
| lineage3.1.1 | 2 |
| lineage4.3.4.2.1 | 7 |
| La1.6 | 1 |
| lineage2.2.1 | 10 |
| La2 | 1 |
| lineage1.1.3.3 | 1 |
| lineage4.1.1.3 | 2 |
| lineage1.1.1.1 | 2 |
| lineage2.2.2 | 2 |
| lineage3 | 2 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage4.1.2.1 | 6 |
| lineage6.3.1 | 1 |
| La1.3 | 2 |
| lineage6.1.2 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage1.2.1.2 | 1 |
| lineage4.3.2.1 | 2 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage4.3.3 | 1 |
| lineage4.2.1 | 1 |
| lineage4.1.2 | 1 |
| lineage4.2.1.1 | 1 |
| La3;lineage4.9 | 1 |
| La1.7.X-unk4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 324 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1183091 | Other | lineage4.9 | None | SRR1180087 | Other | lineage4.9 | None | SRR1208611 | Other | lineage4.9 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | SRR1208543 | Other | lineage4.9 | None | SRR1208476 | Other | lineage4.9 | None | ERR323048 | Sensitive | lineage4.9 | None | SRR1202689 | Sensitive | lineage4.9 | None | SRR1208539 | Sensitive | lineage4.9 | None | SRR1208797 | Sensitive | lineage4.9 | None | ERR4819863 | RR-TB | lineage4.9 | None | SRR1183170 | Other | lineage4.9 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | ERR3275996 | HR-TB | lineage4.3.4.1 | nl | SRR9971046 | MDR-TB | lineage4.8 | None | SRR1208462 | Sensitive | lineage4.9 | None | SRR1209029 | Sensitive | lineage4.9 | None | SRR1202404 | Other | lineage4.9 | None | SRR1208173 | Sensitive | lineage4.9 | None | SRR1208281 | Sensitive | lineage4.9 | None | SRR1208635 | Other | lineage4.9 | None | ERR4811101 | Other | lineage4.4.2 | None | SRR1202425 | Sensitive | lineage4.9 | None | SRR1202735 | Sensitive | lineage4.9 | None | SRR1208264 | Sensitive | lineage4.9 | None | SRR1208398 | Sensitive | lineage4.9 | None | SRR16156804 | Sensitive | lineage4.9 | None | SRR1208683 | Other | lineage4.9 | None | SRR1208925 | Other | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | SRR1183190 | Other | lineage4.9 | None | SRR1183281 | Other | lineage4.9 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | SRR1181490 | Other | lineage4.9 | None | ERR176580 | Sensitive | lineage4.3.4.2.1 | None | SRR1180486 | Other | lineage4.9 | None | SRR1208221 | Other | lineage4.9 | None | SRR10993951 | RR-TB | La1.6 | None | SRR1181403 | Other | lineage4.9 | None | SRR1208424 | Other | lineage4.9 | None | SRR1182927 | Other | lineage4.9 | None | SRR1202603 | Sensitive | lineage4.9 | None | SRR1202721 | Sensitive | lineage4.9 | None | SRR1208290 | Sensitive | lineage4.9 | None | SRR1238559 | Other | lineage4.9 | None | SRR1208471 | Other | lineage4.9 | None | ERR502474 | RR-TB | lineage4.9 | None | SRR1202713 | Sensitive | lineage4.9 | None | SRR1202408 | Other | lineage4.9 | None | SRR1181269 | Other | lineage4.9 | None | SRR1140753 | RR-TB | lineage4.3.4.2.1 | None | SRR1208759 | Sensitive | lineage4.9 | None | SRR1208791 | Other | lineage4.9 | None | SRR1208755 | Sensitive | lineage4.9 | None | ERR4821172 | RR-TB | lineage4.9 | None | SRR1202728 | Other | lineage4.9 | None | SRR1208837 | Sensitive | lineage4.9 | None | SRR1208892 | Sensitive | lineage4.9 | None | SRR1202516 | Other | lineage4.9 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR1209057 | Other | lineage4.9 | None | SRR21689473 | Sensitive | lineage1.1.3.1 | None | SRR1208451 | Sensitive | lineage4.9 | None | SRR1208793 | Other | lineage4.9 | None | SRR1208917 | Sensitive | lineage4.9 | None | SRR1180686 | Other | lineage4.9 | None | SRR1202415 | Sensitive | lineage4.9 | None | SRR1208230 | Other | lineage4.9 | None | SRR13888750 | Other | La2 | None | SRR16156188 | Sensitive | lineage4.9 | None | ERR4798769 | Other | lineage1.1.3.3 | None | SRR1202407 | Other | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR1208313 | Other | lineage4.9 | None | SRR1208405 | Sensitive | lineage4.9 | None | SRR1208421 | Other | lineage4.9 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | SRR1202680 | Other | lineage4.9 | None | SRR1202380 | Sensitive | lineage4.9 | None | ERR4820829 | Other | lineage4.8 | None | SRR1208565 | Other | lineage4.9 | None | SRR1208923 | Sensitive | lineage4.9 | None | SRR1202740 | Other | lineage4.9 | None | SRR1208577 | Other | lineage4.9 | None | SRR1208587 | Sensitive | lineage4.9 | None | SRR1182990 | Other | lineage4.9 | None | SRR1183224 | Other | lineage4.9 | None | SRR1202396 | Other | lineage4.9 | None | SRR1202427 | Sensitive | lineage4.9 | None | SRR1208473 | Other | lineage4.9 | None | ERR4813263 | MDR-TB | lineage4.8 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | SRR1208798 | Other | lineage4.9 | None | SRR1202583 | Sensitive | lineage4.9 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR1180446 | Other | lineage4.9 | None | SRR1183341 | Other | lineage4.9 | None | DRR185000 | Other | lineage1.1.1.1 | None | SRR1202399 | Sensitive | lineage4.9 | None | SRR1202503 | Sensitive | lineage4.9 | None | SRR1183339 | Other | lineage4.9 | None | SRR1183686 | Sensitive | lineage4.9 | None | ERR3797065 | RR-TB | lineage4.9 | None | SRR1208338 | Sensitive | lineage4.9 | None | SRR1208377 | Other | lineage4.9 | None | SRR1208486 | Other | lineage4.9 | None | SRR1208553 | Other | lineage4.9 | None | SRR1202708 | Other | lineage4.9 | None | SRR1183152 | Other | lineage4.9 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR1202627 | Other | lineage4.9 | None | SRR1180831 | Other | lineage4.9 | None | SRR1183520 | Other | lineage4.9 | None | ERR9992784 | XDR-TB | lineage2.2.2 | None | SRR1208827 | Sensitive | lineage4.9 | None | SRR1202508 | Sensitive | lineage4.9 | None | SRR1202547 | Sensitive | lineage4.9 | None | SRR1183373 | Other | lineage4.9 | None | SRR7585400 | MDR-TB | lineage3 | None | SRR1173770 | Other | lineage4.9 | None | ERR3283008 | Other | lineage4.9 | None | ERR4819910 | Sensitive | lineage4.9 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | SRR1208432 | Sensitive | lineage4.9 | None | SRR1208574 | Sensitive | lineage4.9 | None | SRR1208682 | Other | lineage4.9 | None | SRR1208870 | Sensitive | lineage4.9 | None | SRR1173170 | Other | lineage4.9 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1202528 | Sensitive | lineage4.9 | None | SRR1208526 | Sensitive | lineage4.9 | None | SRR1208586 | Other | lineage4.9 | None | SRR1208688 | Sensitive | lineage4.9 | None | SRR1208958 | Other | lineage4.9 | None | SRR1209020 | Sensitive | lineage4.9 | None | SRR1209004 | Sensitive | lineage4.9 | None | SRR1208588 | Other | lineage4.9 | None | SRR1180094 | Other | lineage4.9 | None | SRR1208848 | Sensitive | lineage4.9 | None | SRR1208908 | Sensitive | lineage4.9 | None | SRR1208957 | Sensitive | lineage4.9 | None | ERR11466514 | Sensitive | lineage4.3.4.1 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SRR1209014 | Sensitive | lineage4.9 | None | ERR4818440 | Other | lineage6.3.1 | None | SRR1181589 | Other | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1208721 | Other | lineage4.9 | None | SRR1180687 | Other | lineage4.9 | None | ERR502481 | RR-TB | lineage4.9 | None | SRR1180597 | Other | lineage4.9 | None | SRR1180578 | Other | lineage4.9 | None | SRR1208850 | Other | lineage4.9 | None | SRR1202656 | Sensitive | lineage4.9 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | SRR1183213 | Other | lineage4.9 | None | SRR1208562 | Other | lineage4.9 | None | SRR1202451 | Sensitive | lineage4.9 | None | SRR1208478 | Sensitive | lineage4.9 | None | SRR1183531 | Other | lineage4.9 | None | ERR4769423 | Other | La1.3 | None | SRR1182954 | Other | lineage4.9 | None | SRR1202706 | Other | lineage4.9 | None | ERR108125 | RR-TB | lineage4.9 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR9787033 | Sensitive | lineage6.1.2 | None | ERR2229198 | Sensitive | lineage4.8 | None | SRR1180113 | Other | lineage4.9 | None | SRR1209048 | Other | lineage4.9 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1208298 | Sensitive | lineage4.9 | None | SRR1208648 | Sensitive | lineage4.9 | None | SRR1208792 | Other | lineage4.9 | None | SRR1208763 | Other | lineage4.9 | None | SRR1208876 | Other | lineage4.9 | None | SRR1208891 | Other | lineage4.9 | None | SRR1208965 | Other | lineage4.9 | None | SRR1202702 | Other | lineage4.9 | None | SRR1208508 | Other | lineage4.9 | None | SRR1183067 | Other | lineage4.9 | None | SRR1183181 | Sensitive | lineage4.9 | None | SRR1209032 | Sensitive | lineage4.9 | None | SRR1208847 | Other | lineage4.9 | None | SRR1209030 | Sensitive | lineage4.9 | None | SRR1208369 | Other | lineage4.9 | None | SRR1208515 | Sensitive | lineage4.9 | None | SRR1208694 | Sensitive | lineage4.9 | None | SRR1202403 | Sensitive | lineage4.9 | None | SRR1208545 | Other | lineage4.9 | None | SRR1208561 | Other | lineage4.9 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | DRR184629 | Other | lineage2.2.1 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | SRR1208614 | Other | lineage4.9 | None | SRR1202412 | Sensitive | lineage4.9 | None | SRR1208750 | Sensitive | lineage4.9 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | DRR185024 | Other | lineage2.2.2 | None | SRR1202397 | Sensitive | lineage4.9 | None | SRR1202548 | Sensitive | lineage4.9 | None | SRR1202573 | Other | lineage4.9 | None | SRR1208433 | Sensitive | lineage4.9 | None | SRR1208888 | Sensitive | lineage4.9 | None | SRR1208900 | Other | lineage4.9 | None | SRR1181422 | Other | lineage4.9 | None | SRR1180024 | Other | lineage4.9 | None | SRR1181592 | Other | lineage4.9 | None | SRR1180047 | Other | lineage4.9 | None | SRR1180569 | Sensitive | lineage4.9 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | SRR1208584 | Sensitive | lineage4.9 | None | SRR1209038 | Sensitive | lineage4.9 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR1208765 | Sensitive | lineage4.9 | None | SRR10214505 | Sensitive | lineage1.2.1.2 | None | SRR1208498 | Sensitive | lineage4.9 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | SRR5709926 | MDR-TB | lineage2.2.1 | None | SRR9971168 | Other | lineage4.3.2.1 | None | SRR1208463 | Sensitive | lineage4.9 | None | SRR1202578 | Sensitive | lineage4.9 | None | SRR1208249 | Sensitive | lineage4.9 | None | SRR1202430 | Sensitive | lineage4.9 | None | SRR1208499 | Other | lineage4.9 | None | SRR1208653 | Other | lineage4.9 | None | SRR1181358 | Other | lineage4.9 | None | SRR1208675 | Sensitive | lineage4.9 | None | SRR1208555 | Sensitive | lineage4.9 | None | SRR1208783 | Other | lineage4.9 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1181256 | Other | lineage4.9 | None | SRR1183402 | Other | lineage4.9 | None | SRR1208306 | Other | lineage4.9 | None | SRR1208643 | Sensitive | lineage4.9 | None | SRR1208756 | Other | lineage4.9 | None | SRR1209049 | Other | lineage4.9 | None | SRR1180503 | Other | lineage4.9 | None | SRR1208800 | Sensitive | lineage4.9 | None | SRR1208826 | Sensitive | lineage4.9 | None | SRR1208911 | Sensitive | lineage4.9 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR1183438 | Other | lineage4.9 | None | SRR1208536 | Other | lineage4.9 | None | SRR1140736 | Other | lineage4.1.2.1 | None | SRR1181264 | Sensitive | lineage4.9 | None | SRR1208196 | Sensitive | lineage4.9 | None | SRR1208297 | Other | lineage4.9 | None | SRR1208370 | Sensitive | lineage4.9 | None | SRR1208836 | Other | lineage4.9 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR7765062 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR1140716 | Other | lineage3 | None | SRR1180482 | Other | lineage4.9 | None | SRR1202562 | Sensitive | lineage4.9 | None | SRR1202612 | Sensitive | lineage4.9 | None | SRR1208613 | Sensitive | lineage4.9 | None | SRR1208789 | Sensitive | lineage4.9 | None | SRR1208880 | Other | lineage4.9 | None | SRR1209015 | Sensitive | lineage4.9 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR1180020 | Other | lineage4.9 | None | SRR1208532 | Other | lineage4.9 | None | ERR3283046 | Sensitive | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR1202414 | Sensitive | lineage4.9 | None | SRR1208557 | Other | lineage4.9 | None | SRR1208784 | Other | lineage4.9 | None | SRR1208871 | Sensitive | lineage4.9 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR1208775 | Other | lineage4.9 | None | SRR1183684 | Other | lineage4.9 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | SRR1208277 | Other | lineage4.9 | None | SRR1181147 | Other | lineage4.9 | None | SRR1208507 | Sensitive | lineage4.9 | None | SRR1208552 | Other | lineage4.9 | None | SRR1182958 | Other | lineage4.9 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR6397640 | Other | lineage4.2.1.1 | None | ERR10796559 | Other | lineage4.9 | None | SRR1202384 | Other | lineage4.9 | None | SRR1202537 | Other | lineage4.9 | None | SRR1208332 | Other | lineage4.9 | None | SRR1202714 | Sensitive | lineage4.9 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | SRR1208752 | Other | lineage4.9 | None | SRR1202406 | Sensitive | lineage4.9 | None | SRR1202733 | Sensitive | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR1182880 | Other | lineage4.9 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR1182900 | Sensitive | lineage4.9 | None | ERR502473 | RR-TB | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR1182878 | Other | lineage4.9 | None | SRR1202417 | Other | lineage4.9 | None | SRR1208677 | Other | lineage4.9 | None | SRR1208542 | Other | lineage4.9 | None | ERR4796351 | Sensitive | lineage4.9 | None | SRR1208439 | Sensitive | lineage4.9 | None | SRR1208882 | Sensitive | lineage4.9 | None | SRR20969542 | Other | lineage4.4.2 | None | ERR4820030 | Other | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | SRR1202378 | Other | lineage4.9 | None | SRR1208378 | Other | lineage4.9 | None | SRR1208678 | Sensitive | lineage4.9 | None | SRR1208768 | Other | lineage4.9 | None | SRR1181299 | Other | lineage4.9 | None | SRR1183548 | Other | lineage4.9 | None | SRR1202424 | Sensitive | lineage4.9 | None | SRR1208222 | Sensitive | lineage4.9 | None | ERR3445487 | Other | La1.7.X-unk4 | None | SRR1181569 | Other | lineage4.9 | None | SRR1181580 | Other | lineage4.9 | None | ERR3283043 | Other | lineage4.9 | None | SRR1209022 | Other | lineage4.9 | None | SRR9971065 | RR-TB | lineage2.2.1 | None |
|---|
