Rv0682 - p.Met79Ile
Drug resistance types
11 Sensitive
41 RR-TB
15 HR-TB
16 MDR-TB
11 Pre-XDR-TB
0 XDR-TB
51 Other
lineage Counts
| lineage | Count |
|---|---|
| 8 | |
| lineage3.1.2 | 1 |
| La1.7.1 | 3 |
| lineage1.1.2 | 1 |
| lineage1.2.2 | 1 |
| lineage4 | 7 |
| lineage4.6.2.2 | 2 |
| lineage4.8 | 11 |
| lineage1.1.3.1 | 1 |
| lineage2.2.1 | 15 |
| lineage4.3.3 | 6 |
| lineage4.9;lineage3.1.1 | 1 |
| lineage4.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage1.1.3 | 1 |
| lineage4.1.2.1 | 4 |
| lineage3 | 15 |
| lineage5 | 1 |
| lineage4.1.2 | 2 |
| lineage4.6.1.2 | 4 |
| lineage3.1.2.1 | 1 |
| lineage4.9 | 40 |
| lineage4.1.1.3 | 1 |
| lineage4.5 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.3.4.1 | 1 |
| lineage3.1.1 | 1 |
| lineage4.3.4.2.1 | 3 |
| lineage4.7 | 2 |
| lineage4.1.3 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.3 | 2 |
| La1.7.X-unk4 | 1 |
| lineage2.2.2 | 1 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 145 |
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR16156832 | RR-TB | None | ERR4814356 | Pre-XDR-TB | lineage3.1.2 | None | SRR18391744 | Other | La1.7.1 | es | SRR18391757 | Other | La1.7.1 | es | SRR18391753 | Other | La1.7.1 | es | ERR4815171 | HR-TB | lineage1.1.2 | None | ERR4815225 | RR-TB | lineage1.2.2 | None | ERR4814312 | Other | lineage4 | None | SRR19303773 | Other | lineage4.6.2.2 | None | SRR19303820 | RR-TB | lineage4.8 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | ERR4814617 | Other | lineage1.1.3.1 | None | ERR4814821 | Other | lineage2.2.1 | None | ERR4814700 | Other | lineage4.3.3 | None | ERR171142 | Other | lineage4.9;lineage3.1.1 | None | ERR4814748 | Other | lineage4.8 | None | ERR4815502 | Other | lineage4.1 | None | ERR4816183 | Other | None | ERR4814896 | Other | lineage2.2.1.1 | None | ERR4816093 | Other | lineage1.1.3 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4815572 | Other | lineage4.1.2.1 | None | ERR4815079 | RR-TB | lineage3 | None | ERR4815909 | Other | lineage4.8 | None | ERR4816967 | RR-TB | lineage5 | None | ERR4816531 | Other | lineage4.1.2 | None | SRR3732568 | Sensitive | lineage2.2.1 | None | ERR2229198 | MDR-TB | lineage4.8 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR4816729 | Sensitive | lineage4.9 | None | ERR2229791 | RR-TB | lineage4.9 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816833 | Other | lineage4.1.1.3 | None | ERR4817310 | Other | lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4819002 | HR-TB | lineage4.8 | None | ERR4817826 | RR-TB | lineage4.5 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4818017 | Sensitive | lineage4.9 | None | ERR2510831 | Other | lineage4.3.3 | None | ERR4819017 | RR-TB | lineage3 | None | ERR4818355 | Other | lineage3 | None | ERR4819456 | Other | lineage4.8 | None | SRR5007204 | Other | lineage4.1.2.1 | None | ERR4817584 | MDR-TB | lineage3 | None | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR4819305 | RR-TB | lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4820324 | Other | lineage4 | None | ERR4818393 | RR-TB | lineage3 | None | ERR4819192 | Other | lineage3 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR4819265 | HR-TB | lineage4.3.4.1 | None | ERR4819307 | RR-TB | lineage4 | None | ERR4820746 | RR-TB | lineage3 | None | ERR4819525 | Other | lineage3 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4820503 | Other | lineage2.2.1 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR4820827 | Other | lineage4.1.2 | None | ERR4819876 | HR-TB | lineage4.3.4.2.1 | None | ERR1023509 | Other | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4820151 | RR-TB | lineage4.8 | None | ERR4821811 | RR-TB | lineage4.9 | None | ERR4821057 | HR-TB | lineage4 | None | ERR4820030 | Other | lineage4.9 | None | ERR4820833 | HR-TB | None | ERR4821286 | Other | lineage4.8 | None | ERR4821214 | RR-TB | None | ERR4821288 | Other | lineage4.7 | None | ERR4821334 | RR-TB | lineage4.1.3 | None | ERR4821331 | HR-TB | lineage4.8 | None | ERR4822104 | RR-TB | lineage3 | None | SRR6045267 | RR-TB | lineage4 | None | ERR4821550 | Other | lineage2.2.1 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | SRR6045909 | Other | lineage4.8 | None | SRR6045957 | Other | lineage4.9 | None | SRR6044952 | RR-TB | lineage4.9 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | SRR6046541 | Other | lineage4.9 | None | SRR6046815 | Other | lineage3 | None | SRR6046839 | Other | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR3275941 | RR-TB | lineage4.3 | nl | ERR1023502 | MDR-TB | lineage2.2.1 | None | SRR7645928 | RR-TB | lineage4.7 | None | ERR10796559 | Other | lineage4.9 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR5908229 | Sensitive | lineage4.3.3 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR6197022 | Other | lineage4.9 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR6197032 | Other | lineage4.9 | None | ERR9119101 | Sensitive | lineage4.3.3 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR1049672 | Other | lineage3 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1062928 | RR-TB | lineage4 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR10809037 | Sensitive | lineage4.3 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1140736 | RR-TB | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1173170 | Other | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173310 | MDR-TB | None | SRR1173740 | Other | None | SRR1180446 | Other | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR1181161 | Other | lineage4.9 | None | SRR1181250 | Other | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1196545 | HR-TB | lineage4.9 | None |
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