TB-Profiler result

Run: SRR1173740
Summary

Run ID: SRR1173740

Sample name:

Date: 2024-10-04T15:11:12.778626

Number of reads: 822334

Percentage reads mapped: 15.04

Median coverage: 11.0

Strain: lineage3;lineage4

Spoligotype:

Drug-resistance: Other

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Lineage Table: The lineage is inferred by analysing lineage specific SNPs
Lineage Family RDs Frequency
lineage3 East-African-Indian RD750 0.51
lineage4 Euro-American None 0.67
Drug resistance: This table reports drug-resistance associated mutations found in known resistance genes
Drug Resistance Supporting mutations WHO confidence Comment
rifampicin
isoniazid
ethambutol
pyrazinamide
streptomycin rrs n.799C>T Uncertain significance Mutation from literature
fluoroquinolones
moxifloxacin
ofloxacin
levofloxacin
ciprofloxacin
aminoglycosides
amikacin rrs n.1402C>A Uncertain significance Mutation from literature
n.1484G>T Assoc w R
capreomycin rrs n.1402C>A Uncertain significance Mutation from literature
n.1484G>T Assoc w R
kanamycin rrs n.1402C>A Uncertain significance Mutation from literature
n.1484G>T Assoc w R
cycloserine
ethionamide
clofazimine
para-aminosalicylic_acid
delamanid
bedaquiline
linezolid
Drug resistance-Associated Mutations: This table reports mutations found in candidate resistance genes which have been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs Confidence Comment
rrs 1472644 n.799C>T non_coding_transcript_exon_variant 0.88 streptomycin Uncertain significance Mutation from literature
rrs 1473247 n.1402C>A non_coding_transcript_exon_variant 0.89 amikacin Uncertain significance Mutation from literature
capreomycin Uncertain significance Mutation from literature
kanamycin Uncertain significance Mutation from literature
rrs 1473329 n.1484G>T non_coding_transcript_exon_variant 0.93 amikacin Assoc w R
capreomycin Assoc w R
kanamycin Assoc w R
Non-Associated Mutations: This table reports mutations found in candidate resistance genes which have not been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs Confidence
fgd1 491742 c.960T>C synonymous_variant 1.0 pretomanid
delamanid Not assoc w R - Interim
clofazimine Not assoc w R
rpoB 761027 c.1221A>G synonymous_variant 0.33 rifampicin Not assoc w R - Interim
rpoB 761037 c.1231_1233delTTGinsCTC synonymous_variant 0.33 rifampicin
rpoB 761057 c.1251G>C synonymous_variant 0.33 rifampicin Not assoc w R - Interim
rpoB 761060 c.1254C>G synonymous_variant 0.33 rifampicin Not assoc w R - Interim
rpoB 762167 c.2361T>C synonymous_variant 0.67 rifampicin Not assoc w R - Interim
rpoB 762170 c.2364C>T synonymous_variant 0.62 rifampicin Not assoc w R - Interim
rpoB 762185 c.2379G>C synonymous_variant 0.83 rifampicin Not assoc w R - Interim
rpoB 762189 p.Ile795Leu missense_variant 0.57 rifampicin
rpoB 762194 c.2388G>C synonymous_variant 0.82 rifampicin Not assoc w R - Interim
rpoB 762209 c.2403C>G synonymous_variant 0.42 rifampicin Not assoc w R - Interim
rpoB 762212 c.2406G>C synonymous_variant 0.44 rifampicin Not assoc w R - Interim
rpoB 762233 c.2427G>C synonymous_variant 0.34 rifampicin Not assoc w R - Interim
rpoB 762245 c.2439G>C synonymous_variant 0.52 rifampicin Not assoc w R - Interim
rpoB 762245 c.2439G>T synonymous_variant 0.38 rifampicin
rpoB 762251 c.2445G>C synonymous_variant 0.33 rifampicin
rpoB 762254 c.2448T>C synonymous_variant 0.46 rifampicin Not assoc w R - Interim
rpoB 762254 c.2448T>G synonymous_variant 0.33 rifampicin
rpoB 762257 c.2451C>G synonymous_variant 0.33 rifampicin
rpoB 762273 p.Ala823Ser missense_variant 0.35 rifampicin
rpoB 762278 c.2472C>T synonymous_variant 0.32 rifampicin
rpoB 762284 c.2478G>T synonymous_variant 0.54 rifampicin
rpoB 762878 p.Ile1024Met missense_variant 0.54 rifampicin
rpoB 762879 p.Met1025Leu missense_variant 0.54 rifampicin Uncertain significance
rpoB 762887 c.3081G>C synonymous_variant 0.58 rifampicin Not assoc w R - Interim
rpoC 762896 c.-474G>C upstream_gene_variant 0.69 rifampicin
rpoB 762899 c.3093G>C synonymous_variant 0.64 rifampicin Not assoc w R - Interim
rpoB 762917 c.3111C>G synonymous_variant 0.65 rifampicin Not assoc w R - Interim
rpoB 762923 c.3117C>G synonymous_variant 0.7 rifampicin Not assoc w R - Interim
rpoB 762929 c.3123G>T synonymous_variant 0.71 rifampicin Not assoc w R - Interim
rpoC 762980 c.-390T>C upstream_gene_variant 0.54 rifampicin
rpoC 762983 c.-387C>T upstream_gene_variant 0.54 rifampicin
rpoB 763094 c.3288G>C synonymous_variant 0.41 rifampicin Not assoc w R - Interim
rpoC 763100 c.-270G>A upstream_gene_variant 0.38 rifampicin
rpoC 763103 c.-267G>C upstream_gene_variant 0.88 rifampicin
rpoB 763122 p.Ile1106Leu missense_variant 0.33 rifampicin
rpoB 763127 c.3321G>C synonymous_variant 0.33 rifampicin Not assoc w R - Interim
rpoB 763130 p.Glu1108Asp missense_variant 0.33 rifampicin
rpoC 763136 c.-234C>A upstream_gene_variant 0.33 rifampicin
rpoC 763142 c.-228C>G upstream_gene_variant 0.5 rifampicin
rpoC 763148 c.-222G>C upstream_gene_variant 0.5 rifampicin
rpoC 763157 c.-213G>C upstream_gene_variant 0.25 rifampicin
rpoB 763157 c.3351G>T synonymous_variant 0.64 rifampicin Not assoc w R - Interim
rpoC 763160 c.-210G>C upstream_gene_variant 0.89 rifampicin
rpoB 763161 p.Leu1119Ile missense_variant 0.89 rifampicin
rpoB 763166 c.3360A>G synonymous_variant 0.89 rifampicin Not assoc w R - Interim
rpoC 763169 c.-201A>G upstream_gene_variant 0.22 rifampicin
rpoB 763170 p.Leu1122Met missense_variant 0.89 rifampicin
rpoC 763181 c.-189G>C upstream_gene_variant 0.63 rifampicin
rpoC 763456 c.87A>G synonymous_variant 0.65 rifampicin Not assoc w R - Interim
rpoC 763462 c.93G>C synonymous_variant 0.44 rifampicin
rpoC 763465 c.96G>A synonymous_variant 0.44 rifampicin
rpoC 763468 c.99G>C synonymous_variant 0.63 rifampicin Not assoc w R - Interim
rpoC 763483 c.114G>C synonymous_variant 0.31 rifampicin
rpoC 763486 c.117T>C synonymous_variant 0.52 rifampicin Not assoc w R - Interim
rpoC 763486 c.117T>G synonymous_variant 0.32 rifampicin
rpoC 763492 c.123G>C synonymous_variant 0.51 rifampicin Not assoc w R - Interim
rpoC 763504 c.135C>A synonymous_variant 0.87 rifampicin
rpoC 763507 c.138G>C synonymous_variant 0.88 rifampicin
rpoC 763528 c.159G>C synonymous_variant 0.91 rifampicin
rpoC 763531 c.162G>C synonymous_variant 0.36 rifampicin Not assoc w R
rpoC 763534 c.165T>C synonymous_variant 0.36 rifampicin
rpoC 763537 c.168C>T synonymous_variant 0.36 rifampicin
rpoC 763546 c.177A>G synonymous_variant 0.9 rifampicin Not assoc w R - Interim
rpoC 763550 p.Tyr61Ala missense_variant 0.4 rifampicin
rpoC 763570 c.201G>C synonymous_variant 0.45 rifampicin Not assoc w R - Interim
rpoC 763570 c.201G>T synonymous_variant 0.53 rifampicin
rpoC 763573 c.204G>C synonymous_variant 0.51 rifampicin Not assoc w R - Interim
rpoC 763585 c.216C>G synonymous_variant 0.58 rifampicin
rpoC 763621 c.252C>T synonymous_variant 0.77 rifampicin
rpoC 763633 c.264T>C synonymous_variant 0.58 rifampicin Not assoc w R - Interim
rpoC 763642 c.273G>C synonymous_variant 0.81 rifampicin Not assoc w R - Interim
rpoC 763660 c.291T>C synonymous_variant 0.8 rifampicin Not assoc w R - Interim
rpoC 763666 c.297G>T synonymous_variant 0.46 rifampicin
rpoC 763669 c.300C>G synonymous_variant 0.32 rifampicin Not assoc w R - Interim
rpoC 763675 c.306C>G synonymous_variant 0.39 rifampicin Not assoc w R - Interim
rpoC 763702 c.333C>G synonymous_variant 0.58 rifampicin Not assoc w R - Interim
rpoC 763703 c.334_336delTCGinsAGC synonymous_variant 0.58 rifampicin
rpoC 763708 c.339G>T synonymous_variant 0.74 rifampicin
rpoC 763714 c.345G>T synonymous_variant 0.78 rifampicin
rpoC 763717 c.348T>C synonymous_variant 0.82 rifampicin Not assoc w R - Interim
rpoC 763723 c.354G>C synonymous_variant 0.78 rifampicin
rpoC 763729 c.360G>C synonymous_variant 0.78 rifampicin
rpoC 763744 c.375G>C synonymous_variant 0.77 rifampicin
rpoC 763751 p.Ile128Val missense_variant 0.71 rifampicin
rpoC 763765 c.396T>G synonymous_variant 0.64 rifampicin Not assoc w R - Interim
rpoC 764507 p.Ala380Ser missense_variant 0.7 rifampicin
rpoC 764521 c.1152T>C synonymous_variant 0.75 rifampicin Not assoc w R - Interim
rpoC 764524 c.1155C>T synonymous_variant 0.75 rifampicin
rpoC 764527 c.1158C>T synonymous_variant 0.77 rifampicin Not assoc w R - Interim
rpoC 764533 c.1164C>T synonymous_variant 0.86 rifampicin
rpoC 764536 c.1167G>T synonymous_variant 0.86 rifampicin Not assoc w R - Interim
rpoC 764542 c.1173C>G synonymous_variant 0.88 rifampicin
rpoC 764548 c.1179G>A synonymous_variant 0.93 rifampicin
rpoC 764560 c.1191T>C synonymous_variant 0.95 rifampicin Not assoc w R - Interim
rpoC 764575 c.1206T>G synonymous_variant 0.95 rifampicin Not assoc w R - Interim
rpoC 764578 c.1209C>G synonymous_variant 0.53 rifampicin
rpoC 764581 c.1212T>C synonymous_variant 0.95 rifampicin
rpoC 764582 p.Leu405Met missense_variant 0.95 rifampicin
rpoC 764605 c.1236G>C synonymous_variant 0.46 rifampicin Not assoc w R - Interim
rpoC 764611 c.1242G>T synonymous_variant 0.5 rifampicin Not assoc w R - Interim
rpoC 764626 c.1257C>T synonymous_variant 0.52 rifampicin Not assoc w R - Interim
rpoC 764632 c.1263T>C synonymous_variant 0.83 rifampicin Not assoc w R - Interim
rpoC 764644 c.1275G>C synonymous_variant 0.64 rifampicin Not assoc w R - Interim
rpoC 764650 c.1281G>T synonymous_variant 0.85 rifampicin Not assoc w R - Interim
rpoC 764662 c.1293G>C synonymous_variant 0.87 rifampicin Not assoc w R - Interim
rpoC 764672 p.Gln435Thr missense_variant 0.68 rifampicin
rpoC 764677 c.1308C>G synonymous_variant 0.7 rifampicin Not assoc w R - Interim
rpoC 764701 c.1332C>G synonymous_variant 0.87 rifampicin Not assoc w R - Interim
rpoC 764716 c.1347G>C synonymous_variant 0.29 rifampicin Not assoc w R - Interim
rpoC 764716 c.1347G>T synonymous_variant 0.63 rifampicin
rpoC 764737 c.1368G>C synonymous_variant 0.32 rifampicin
rpoC 764746 c.1377G>C synonymous_variant 0.91 rifampicin
rpoC 764752 c.1383G>C synonymous_variant 0.9 rifampicin Not assoc w R - Interim
rpsL 781796 p.Met79Ile missense_variant 0.76 streptomycin
rpsL 781802 c.243G>C synonymous_variant 0.76 streptomycin
rpsL 781811 c.252C>T synonymous_variant 0.82 streptomycin
rpsL 781817 c.258G>T synonymous_variant 0.86 streptomycin
rpsL 781829 c.270G>T synonymous_variant 0.83 streptomycin
rpsL 781832 c.273T>C synonymous_variant 0.86 streptomycin
rpsL 781859 c.300T>C synonymous_variant 0.74 streptomycin Not assoc w R - Interim
rpsL 781865 c.306G>C synonymous_variant 0.77 streptomycin
rpsL 781868 c.309T>C synonymous_variant 0.8 streptomycin
rpsL 781871 c.312G>C synonymous_variant 0.77 streptomycin
rpsL 781880 c.321C>T synonymous_variant 0.74 streptomycin
rpsL 781884 p.Asn109Gly missense_variant 0.71 streptomycin
rpsL 781892 p.Lys111Asn missense_variant 0.71 streptomycin
rpsL 781898 c.339A>T synonymous_variant 0.71 streptomycin
rpsL 781901 c.342C>T synonymous_variant 0.69 streptomycin
rplC 800654 c.-155T>C upstream_gene_variant 0.68 linezolid
rplC 800667 c.-142_-140delTCGinsAGC upstream_gene_variant 0.64 linezolid
rplC 800672 c.-137G>C upstream_gene_variant 0.64 linezolid
rplC 800693 c.-116A>G upstream_gene_variant 0.64 linezolid
rplC 800702 c.-107G>C upstream_gene_variant 0.44 linezolid
rplC 800703 c.-106_-104delTTGinsCTC upstream_gene_variant 0.44 linezolid
Rv1129c 1254562 c.-28T>C upstream_gene_variant 1.0 levofloxacin Not assoc w R
moxifloxacin Not assoc w R
isoniazid Not assoc w R
rifampicin Not assoc w R
rrs 1471659 n.-187C>T upstream_gene_variant 1.0 kanamycin
capreomycin
streptomycin
amikacin
rrs 1472078 n.233C>T non_coding_transcript_exon_variant 0.43 kanamycin
capreomycin
streptomycin
amikacin
rrs 1472092 n.247C>T non_coding_transcript_exon_variant 0.28 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin
amikacin Uncertain significance
rrs 1472102 n.257G>A non_coding_transcript_exon_variant 0.22 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin
amikacin Uncertain significance
rrs 1472106 n.261G>A non_coding_transcript_exon_variant 0.79 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Not assoc w R
rrs 1472108 n.263C>T non_coding_transcript_exon_variant 0.8 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472112 n.267C>T non_coding_transcript_exon_variant 0.19 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472113 n.268T>C non_coding_transcript_exon_variant 0.19 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472120 n.275G>A non_coding_transcript_exon_variant 0.24 kanamycin
capreomycin
streptomycin
amikacin
rrs 1472148 n.303T>C non_coding_transcript_exon_variant 0.88 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472150 n.305T>A non_coding_transcript_exon_variant 0.88 kanamycin Uncertain significance
capreomycin Not assoc w R
streptomycin Uncertain significance
amikacin Not assoc w R
rrs 1472172 n.327T>C non_coding_transcript_exon_variant 0.92 kanamycin Uncertain significance
capreomycin Not assoc w R
streptomycin Uncertain significance
amikacin Not assoc w R
rrs 1472223 n.378C>G non_coding_transcript_exon_variant 0.34 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472225 n.380C>A non_coding_transcript_exon_variant 0.84 kanamycin Uncertain significance
capreomycin Not assoc w R
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472228 n.383G>C non_coding_transcript_exon_variant 0.34 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472245 n.400C>A non_coding_transcript_exon_variant 0.36 kanamycin
capreomycin
streptomycin
amikacin
rrs 1472251 n.406G>A non_coding_transcript_exon_variant 0.5 kanamycin Uncertain significance
capreomycin Not assoc w R
streptomycin Uncertain significance
amikacin Not assoc w R
rrs 1472251 n.406G>C non_coding_transcript_exon_variant 0.39 kanamycin
capreomycin
streptomycin
amikacin
rrs 1472289 n.444T>G non_coding_transcript_exon_variant 0.76 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472290 n.445C>G non_coding_transcript_exon_variant 0.75 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472297 n.453_461delGTCCGGGTT non_coding_transcript_exon_variant 0.78 kanamycin
capreomycin
streptomycin
amikacin
rrs 1472309 n.464C>T non_coding_transcript_exon_variant 0.7 kanamycin
capreomycin
streptomycin
amikacin
rrs 1472311 n.466C>T non_coding_transcript_exon_variant 0.7 kanamycin
capreomycin
streptomycin Uncertain significance
amikacin
rrs 1472312 n.468_470delGAT non_coding_transcript_exon_variant 0.7 kanamycin
capreomycin
streptomycin
amikacin
rrs 1472324 n.479G>C non_coding_transcript_exon_variant 0.76 kanamycin
capreomycin
streptomycin Uncertain significance
amikacin
rrs 1472325 n.480G>C non_coding_transcript_exon_variant 0.76 kanamycin
capreomycin
streptomycin Uncertain significance
amikacin
rrs 1472337 n.492C>T non_coding_transcript_exon_variant 0.21 kanamycin Not assoc w R
capreomycin Not assoc w R
streptomycin Not assoc w R - Interim
amikacin Not assoc w R
rrs 1472344 n.499C>T non_coding_transcript_exon_variant 0.87 kanamycin Uncertain significance
capreomycin Not assoc w R
streptomycin Uncertain significance
amikacin Not assoc w R
rrs 1472380 n.535G>A non_coding_transcript_exon_variant 0.31 kanamycin
capreomycin
streptomycin
amikacin
rrs 1472400 n.555C>T non_coding_transcript_exon_variant 0.75 kanamycin Uncertain significance
capreomycin Not assoc w R
streptomycin Uncertain significance
amikacin Not assoc w R
rrs 1472416 n.571C>T non_coding_transcript_exon_variant 0.5 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472422 n.577T>C non_coding_transcript_exon_variant 0.42 kanamycin Uncertain significance
capreomycin Not assoc w R
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472427 n.582T>G non_coding_transcript_exon_variant 0.22 kanamycin
capreomycin
streptomycin
amikacin
rrs 1472476 n.631A>G non_coding_transcript_exon_variant 0.38 kanamycin
capreomycin
streptomycin
amikacin
rrs 1472484 n.639A>T non_coding_transcript_exon_variant 0.29 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472494 n.649A>G non_coding_transcript_exon_variant 0.69 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472495 n.650C>T non_coding_transcript_exon_variant 0.32 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472496 n.651T>A non_coding_transcript_exon_variant 0.37 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin
amikacin Uncertain significance
rrs 1472496 n.651T>G non_coding_transcript_exon_variant 0.33 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472498 n.653C>T non_coding_transcript_exon_variant 0.71 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472506 n.661A>T non_coding_transcript_exon_variant 0.48 kanamycin
capreomycin
streptomycin
amikacin
rrs 1472530 n.685G>A non_coding_transcript_exon_variant 0.85 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Not assoc w R
rrs 1472558 n.713G>A non_coding_transcript_exon_variant 0.4 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472569 n.724G>A non_coding_transcript_exon_variant 0.41 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472572 n.727T>A non_coding_transcript_exon_variant 0.48 kanamycin
capreomycin
streptomycin
amikacin
rrs 1472581 n.736A>C non_coding_transcript_exon_variant 0.41 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472581 n.736A>T non_coding_transcript_exon_variant 0.5 kanamycin Uncertain significance
capreomycin Not assoc w R
streptomycin Uncertain significance
amikacin Not assoc w R
rrs 1472582 n.737G>A non_coding_transcript_exon_variant 0.4 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472584 n.739A>T non_coding_transcript_exon_variant 0.41 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472591 n.746G>A non_coding_transcript_exon_variant 0.48 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472597 n.752G>A non_coding_transcript_exon_variant 0.41 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472607 n.762G>A non_coding_transcript_exon_variant 0.89 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472655 n.810G>T non_coding_transcript_exon_variant 0.87 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472660 n.815T>C non_coding_transcript_exon_variant 0.86 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472661 n.816A>G non_coding_transcript_exon_variant 0.51 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Not assoc w R
rrs 1472673 n.828_838delTTTCCTTCCTTinsGCTCATTCCAC non_coding_transcript_exon_variant 0.65 kanamycin
capreomycin
streptomycin
amikacin
rrs 1472685 n.840G>A non_coding_transcript_exon_variant 0.62 kanamycin
capreomycin
streptomycin
amikacin
rrs 1472687 n.842A>T non_coding_transcript_exon_variant 0.67 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin
amikacin Uncertain significance
rrs 1472692 n.847T>C non_coding_transcript_exon_variant 0.21 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472697 n.852T>C non_coding_transcript_exon_variant 0.5 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Not assoc w R
rrs 1472713 n.868T>C non_coding_transcript_exon_variant 0.45 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Not assoc w R
rrs 1472714 n.869A>G non_coding_transcript_exon_variant 0.82 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472734 n.889C>T non_coding_transcript_exon_variant 0.32 kanamycin Uncertain significance
capreomycin Not assoc w R
streptomycin Uncertain significance
amikacin Not assoc w R
rrs 1472790 n.945T>C non_coding_transcript_exon_variant 0.81 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472814 n.969G>A non_coding_transcript_exon_variant 0.17 kanamycin
capreomycin
streptomycin
amikacin
rrs 1472824 n.979T>A non_coding_transcript_exon_variant 0.68 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Not assoc w R
rrs 1472825 n.980G>A non_coding_transcript_exon_variant 0.64 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472828 n.983T>C non_coding_transcript_exon_variant 0.58 kanamycin Uncertain significance
capreomycin Not assoc w R
streptomycin Uncertain significance
amikacin Not assoc w R
rrs 1472857 n.1012A>G non_coding_transcript_exon_variant 1.0 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472880 n.1035G>A non_coding_transcript_exon_variant 0.6 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472895 n.1050C>T non_coding_transcript_exon_variant 0.72 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Not assoc w R
rrs 1472952 n.1107T>C non_coding_transcript_exon_variant 0.85 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472955 n.1110C>T non_coding_transcript_exon_variant 0.86 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472956 n.1111T>C non_coding_transcript_exon_variant 0.87 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472957 n.1112C>T non_coding_transcript_exon_variant 0.55 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472970 n.1126delG non_coding_transcript_exon_variant 0.24 kanamycin
capreomycin
streptomycin
amikacin
rrs 1472973 n.1128A>G non_coding_transcript_exon_variant 0.65 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472973 n.1128A>T non_coding_transcript_exon_variant 0.24 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin
amikacin Uncertain significance
rrs 1472974 n.1129A>C non_coding_transcript_exon_variant 0.24 kanamycin
capreomycin
streptomycin
amikacin
rrs 1472975 n.1130T>G non_coding_transcript_exon_variant 0.24 kanamycin
capreomycin
streptomycin
amikacin
rrs 1472982 n.1137G>A non_coding_transcript_exon_variant 0.55 kanamycin
capreomycin
streptomycin
amikacin
rrs 1472987 n.1142G>A non_coding_transcript_exon_variant 0.89 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472989 n.1144G>A non_coding_transcript_exon_variant 0.5 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472990 n.1145A>G non_coding_transcript_exon_variant 0.9 kanamycin Not assoc w R
capreomycin Not assoc w R
streptomycin Uncertain significance
amikacin Not assoc w R
rrs 1473035 n.1190G>A non_coding_transcript_exon_variant 0.85 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Not assoc w R
rrs 1473047 n.1202C>T non_coding_transcript_exon_variant 0.43 kanamycin
capreomycin
streptomycin
amikacin
rrs 1473055 n.1210C>T non_coding_transcript_exon_variant 0.83 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1473056 n.1211A>T non_coding_transcript_exon_variant 0.83 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Not assoc w R
rrs 1473066 n.1221A>G non_coding_transcript_exon_variant 0.86 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1473088 n.1243A>G non_coding_transcript_exon_variant 0.68 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1473093 n.1248C>T non_coding_transcript_exon_variant 0.74 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1473099 n.1254T>A non_coding_transcript_exon_variant 0.68 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1473100 n.1255G>A non_coding_transcript_exon_variant 0.68 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1473102 n.1257C>T non_coding_transcript_exon_variant 0.7 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1473104 n.1259C>T non_coding_transcript_exon_variant 0.7 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1473110 n.1265T>G non_coding_transcript_exon_variant 0.69 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1473111 n.1266A>G non_coding_transcript_exon_variant 0.72 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1473115 n.1270G>T non_coding_transcript_exon_variant 0.58 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1473121 n.1276T>C non_coding_transcript_exon_variant 0.7 kanamycin Uncertain significance
capreomycin Not assoc w R
streptomycin Uncertain significance
amikacin Not assoc w R
rrs 1473122 n.1277_1282delTAAAAGinsAAAAAA non_coding_transcript_exon_variant 0.73 kanamycin
capreomycin
streptomycin
amikacin
rrs 1473130 n.1285G>A non_coding_transcript_exon_variant 0.33 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1473145 n.1300C>T non_coding_transcript_exon_variant 0.48 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1473147 n.1302G>T non_coding_transcript_exon_variant 0.39 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1473148 n.1303G>A non_coding_transcript_exon_variant 0.42 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1473157 n.1312C>T non_coding_transcript_exon_variant 0.44 kanamycin
capreomycin
streptomycin
amikacin
rrs 1473163 n.1318C>T non_coding_transcript_exon_variant 0.54 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1473164 n.1319C>A non_coding_transcript_exon_variant 0.52 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1473166 n.1321G>A non_coding_transcript_exon_variant 0.36 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1473252 n.1407T>C non_coding_transcript_exon_variant 0.91 kanamycin Not assoc w R
capreomycin Not assoc w R
streptomycin Uncertain significance
amikacin Not assoc w R
rrs 1473259 n.1414C>T non_coding_transcript_exon_variant 0.59 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Not assoc w R
rrs 1473276 n.1431A>G non_coding_transcript_exon_variant 0.93 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1473288 n.1443delCinsAGTTT non_coding_transcript_exon_variant 0.3 kanamycin
capreomycin
streptomycin
amikacin
rrs 1473290 n.1445C>T non_coding_transcript_exon_variant 0.56 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin
amikacin Uncertain significance
rrs 1473291 n.1446_1453delGGGAGGGAinsTGGAGGGG non_coding_transcript_exon_variant 0.38 kanamycin
capreomycin
streptomycin
amikacin
rrs 1473301 n.1456T>C non_coding_transcript_exon_variant 0.93 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1473305 n.1460G>T non_coding_transcript_exon_variant 0.35 kanamycin
capreomycin
streptomycin
amikacin
rrs 1473315 n.1470T>C non_coding_transcript_exon_variant 0.93 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1473316 n.1471C>T non_coding_transcript_exon_variant 0.93 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1473319 n.1474C>T non_coding_transcript_exon_variant 0.42 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrl 1473698 n.41G>A non_coding_transcript_exon_variant 0.22 capreomycin
linezolid
rrl 1473699 n.42A>G non_coding_transcript_exon_variant 0.22 capreomycin Uncertain significance
linezolid
rrl 1473788 n.131A>G non_coding_transcript_exon_variant 0.58 capreomycin Uncertain significance
linezolid
rrl 1473789 n.132G>C non_coding_transcript_exon_variant 0.58 capreomycin
linezolid
rrl 1473795 n.138G>A non_coding_transcript_exon_variant 0.55 capreomycin
linezolid
rrl 1473797 n.140G>C non_coding_transcript_exon_variant 0.58 capreomycin
linezolid
rrl 1473806 n.149_150delCTinsGC non_coding_transcript_exon_variant 0.64 capreomycin
linezolid
rrl 1473811 n.154C>T non_coding_transcript_exon_variant 0.52 capreomycin
linezolid
rrl 1473815 n.158T>C non_coding_transcript_exon_variant 0.44 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1473821 n.164T>C non_coding_transcript_exon_variant 0.39 capreomycin
linezolid
rrl 1473823 n.166T>C non_coding_transcript_exon_variant 0.38 capreomycin
linezolid
rrl 1473832 n.175delCinsTT non_coding_transcript_exon_variant 0.53 capreomycin
linezolid
rrl 1473832 n.175_176delCGinsTGT non_coding_transcript_exon_variant 0.32 capreomycin
linezolid
rrl 1473844 n.187C>T non_coding_transcript_exon_variant 0.63 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1473870 n.213G>A non_coding_transcript_exon_variant 0.54 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1473871 n.214T>C non_coding_transcript_exon_variant 0.51 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1473876 n.219G>A non_coding_transcript_exon_variant 0.71 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1473884 n.227C>T non_coding_transcript_exon_variant 0.22 capreomycin
linezolid
rrl 1473887 n.230T>G non_coding_transcript_exon_variant 0.7 capreomycin Uncertain significance
linezolid
rrl 1473888 n.231T>A non_coding_transcript_exon_variant 0.73 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1473889 n.232G>A non_coding_transcript_exon_variant 0.21 capreomycin
linezolid
rrl 1473898 n.241C>T non_coding_transcript_exon_variant 0.64 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1473899 n.242A>G non_coding_transcript_exon_variant 0.71 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1473916 n.259C>A non_coding_transcript_exon_variant 0.6 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1473922 n.265A>T non_coding_transcript_exon_variant 0.47 capreomycin
linezolid
rrl 1473923 n.266C>G non_coding_transcript_exon_variant 0.5 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474151 n.494C>T non_coding_transcript_exon_variant 0.73 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474155 n.498G>A non_coding_transcript_exon_variant 0.76 capreomycin
linezolid
rrl 1474164 n.507C>T non_coding_transcript_exon_variant 0.86 capreomycin
linezolid
rrl 1474166 n.509G>C non_coding_transcript_exon_variant 0.24 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474171 n.514C>G non_coding_transcript_exon_variant 0.62 capreomycin
linezolid
rrl 1474179 n.522C>T non_coding_transcript_exon_variant 0.25 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474181 n.524C>T non_coding_transcript_exon_variant 0.61 capreomycin Uncertain significance
linezolid
rrl 1474183 n.526_527delTCinsCT non_coding_transcript_exon_variant 0.88 capreomycin
linezolid
rrl 1474186 n.529A>G non_coding_transcript_exon_variant 0.24 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474201 n.544T>C non_coding_transcript_exon_variant 0.33 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474202 n.545T>C non_coding_transcript_exon_variant 0.61 capreomycin
linezolid
rrl 1474218 n.561T>A non_coding_transcript_exon_variant 0.33 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474228 n.571T>A non_coding_transcript_exon_variant 0.3 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474249 n.592G>T non_coding_transcript_exon_variant 0.27 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474252 n.595T>A non_coding_transcript_exon_variant 0.28 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474253 n.596A>T non_coding_transcript_exon_variant 0.28 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474263 n.606G>A non_coding_transcript_exon_variant 0.61 capreomycin Uncertain significance
linezolid
rrl 1474269 n.612C>T non_coding_transcript_exon_variant 0.86 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474281 n.624A>G non_coding_transcript_exon_variant 0.21 capreomycin
linezolid
rrl 1474287 n.630T>A non_coding_transcript_exon_variant 0.66 capreomycin
linezolid
rrl 1474290 n.633T>C non_coding_transcript_exon_variant 0.45 capreomycin
linezolid
rrl 1474292 n.635_651delTTCCTCTCCGGAGGAGGinsGGTT non_coding_transcript_exon_variant 0.7 capreomycin
linezolid
rrl 1474316 n.659T>C non_coding_transcript_exon_variant 0.2 capreomycin
linezolid
rrl 1474348 n.691C>T non_coding_transcript_exon_variant 0.67 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474351 n.694G>C non_coding_transcript_exon_variant 0.51 capreomycin Uncertain significance
linezolid
rrl 1474353 n.696A>G non_coding_transcript_exon_variant 0.51 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474354 n.697C>T non_coding_transcript_exon_variant 0.66 capreomycin
linezolid
rrl 1474355 n.698A>G non_coding_transcript_exon_variant 0.53 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474356 n.699T>C non_coding_transcript_exon_variant 0.53 capreomycin Uncertain significance
linezolid
rrl 1474359 n.702C>G non_coding_transcript_exon_variant 0.66 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474362 n.705A>G non_coding_transcript_exon_variant 0.67 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474387 n.730C>T non_coding_transcript_exon_variant 0.78 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474402 n.745T>C non_coding_transcript_exon_variant 0.75 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474406 n.749T>C non_coding_transcript_exon_variant 0.35 capreomycin
linezolid
rrl 1474406 n.749T>G non_coding_transcript_exon_variant 0.38 capreomycin
linezolid
rrl 1474488 n.831G>T non_coding_transcript_exon_variant 0.8 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474497 n.840G>C non_coding_transcript_exon_variant 0.8 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474506 n.849C>G non_coding_transcript_exon_variant 0.83 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474516 n.859C>A non_coding_transcript_exon_variant 0.78 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474537 n.880G>A non_coding_transcript_exon_variant 0.9 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474558 n.901G>T non_coding_transcript_exon_variant 0.19 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474584 n.927C>T non_coding_transcript_exon_variant 0.35 capreomycin
linezolid
rrl 1474632 n.975G>T non_coding_transcript_exon_variant 0.49 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474636 n.979A>T non_coding_transcript_exon_variant 0.93 capreomycin Uncertain significance
linezolid
rrl 1474637 n.980C>T non_coding_transcript_exon_variant 0.93 capreomycin Uncertain significance
linezolid
rrl 1474638 n.981C>G non_coding_transcript_exon_variant 0.93 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474639 n.982G>C non_coding_transcript_exon_variant 0.93 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474663 n.1006C>T non_coding_transcript_exon_variant 0.93 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474673 n.1016T>C non_coding_transcript_exon_variant 0.92 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474676 n.1019T>C non_coding_transcript_exon_variant 0.91 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474677 n.1020A>G non_coding_transcript_exon_variant 0.91 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474692 n.1035G>A non_coding_transcript_exon_variant 0.88 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474694 n.1037C>T non_coding_transcript_exon_variant 0.35 capreomycin
linezolid
rrl 1474709 n.1053_1056delTGGT non_coding_transcript_exon_variant 0.73 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474717 n.1060_1061insGTGAG non_coding_transcript_exon_variant 0.67 capreomycin
linezolid
rrl 1474734 n.1077G>T non_coding_transcript_exon_variant 0.79 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474736 n.1079C>T non_coding_transcript_exon_variant 0.17 capreomycin
linezolid
rrl 1474749 n.1092C>T non_coding_transcript_exon_variant 0.77 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474753 n.1097delC non_coding_transcript_exon_variant 0.76 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474760 n.1103A>G non_coding_transcript_exon_variant 0.82 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474779 n.1122G>A non_coding_transcript_exon_variant 0.85 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474780 n.1123C>T non_coding_transcript_exon_variant 0.85 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474782 n.1125G>A non_coding_transcript_exon_variant 0.87 capreomycin Not assoc w R
linezolid Uncertain significance
rrl 1474783 n.1126G>A non_coding_transcript_exon_variant 0.17 capreomycin
linezolid
rrl 1474790 n.1133C>T non_coding_transcript_exon_variant 0.7 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474794 n.1137C>T non_coding_transcript_exon_variant 0.91 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474806 n.1149A>G non_coding_transcript_exon_variant 0.32 capreomycin
linezolid
rrl 1474822 n.1165G>T non_coding_transcript_exon_variant 0.38 capreomycin
linezolid
rrl 1474823 n.1166C>G non_coding_transcript_exon_variant 0.54 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474827 n.1170C>T non_coding_transcript_exon_variant 0.93 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474830 n.1173A>G non_coding_transcript_exon_variant 0.44 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474830 n.1173A>T non_coding_transcript_exon_variant 0.49 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474831 n.1174A>G non_coding_transcript_exon_variant 0.49 capreomycin Uncertain significance
linezolid
rrl 1474832 n.1175A>T non_coding_transcript_exon_variant 0.49 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474869 n.1212G>T non_coding_transcript_exon_variant 0.47 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474904 n.1247G>C non_coding_transcript_exon_variant 0.41 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474905 n.1248T>A non_coding_transcript_exon_variant 0.55 capreomycin
linezolid
rrl 1474905 n.1248T>C non_coding_transcript_exon_variant 0.38 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474913 n.1256T>C non_coding_transcript_exon_variant 0.41 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474927 n.1271delC non_coding_transcript_exon_variant 0.31 capreomycin
linezolid
rrl 1474932 n.1275C>T non_coding_transcript_exon_variant 0.31 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474936 n.1279C>T non_coding_transcript_exon_variant 0.47 capreomycin
linezolid
rrl 1474938 n.1281G>A non_coding_transcript_exon_variant 0.45 capreomycin
linezolid
rrl 1475104 n.1447T>A non_coding_transcript_exon_variant 0.64 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475109 n.1452C>T non_coding_transcript_exon_variant 0.48 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475114 n.1457C>T non_coding_transcript_exon_variant 0.68 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475116 n.1459G>A non_coding_transcript_exon_variant 0.67 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475124 n.1467A>T non_coding_transcript_exon_variant 0.65 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475129 n.1472G>A non_coding_transcript_exon_variant 0.81 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475175 n.1518G>C non_coding_transcript_exon_variant 0.76 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475176 n.1519G>A non_coding_transcript_exon_variant 0.52 capreomycin
linezolid
rrl 1475508 n.1851A>T non_coding_transcript_exon_variant 0.44 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475517 n.1860C>T non_coding_transcript_exon_variant 0.43 capreomycin
linezolid
rrl 1475526 n.1869C>A non_coding_transcript_exon_variant 0.72 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475531 n.1874C>T non_coding_transcript_exon_variant 0.74 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475536 n.1879C>T non_coding_transcript_exon_variant 0.3 capreomycin
linezolid
rrl 1475538 n.1881T>A non_coding_transcript_exon_variant 0.74 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475539 n.1882A>T non_coding_transcript_exon_variant 0.74 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475544 n.1887A>T non_coding_transcript_exon_variant 0.45 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475545 n.1888T>G non_coding_transcript_exon_variant 0.75 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475548 n.1891C>T non_coding_transcript_exon_variant 0.75 capreomycin
linezolid
rrl 1475549 n.1892T>C non_coding_transcript_exon_variant 0.75 capreomycin
linezolid
rrl 1475550 n.1893A>G non_coding_transcript_exon_variant 0.75 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475562 n.1905C>T non_coding_transcript_exon_variant 0.46 capreomycin
linezolid
rrl 1475599 n.1942A>G non_coding_transcript_exon_variant 0.34 capreomycin
linezolid Uncertain significance
rrl 1475649 n.1992A>G non_coding_transcript_exon_variant 0.7 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475655 n.1998T>G non_coding_transcript_exon_variant 0.71 capreomycin Uncertain significance
linezolid
rrl 1475659 n.2002G>A non_coding_transcript_exon_variant 0.78 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475672 n.2015C>T non_coding_transcript_exon_variant 0.37 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475696 n.2039T>A non_coding_transcript_exon_variant 0.87 capreomycin Uncertain significance
linezolid
rrl 1475697 n.2040C>A non_coding_transcript_exon_variant 0.4 capreomycin Uncertain significance
linezolid
rrl 1475697 n.2040C>T non_coding_transcript_exon_variant 0.47 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475699 n.2042C>T non_coding_transcript_exon_variant 0.87 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475702 n.2045G>T non_coding_transcript_exon_variant 0.4 capreomycin Uncertain significance
linezolid
rrl 1475703 n.2046A>T non_coding_transcript_exon_variant 0.89 capreomycin Uncertain significance
linezolid
rrl 1475763 n.2106C>T non_coding_transcript_exon_variant 0.88 capreomycin Uncertain significance
linezolid
rrl 1475764 n.2107A>T non_coding_transcript_exon_variant 0.24 capreomycin
linezolid
rrl 1475765 n.2108A>T non_coding_transcript_exon_variant 0.17 capreomycin
linezolid
rrl 1475775 n.2118G>T non_coding_transcript_exon_variant 0.16 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475883 n.2226A>C non_coding_transcript_exon_variant 0.52 capreomycin Uncertain significance
linezolid
rrl 1475883 n.2226A>T non_coding_transcript_exon_variant 0.43 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475884 n.2227A>G non_coding_transcript_exon_variant 0.44 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475897 n.2240T>C non_coding_transcript_exon_variant 0.94 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475898 n.2241A>G non_coding_transcript_exon_variant 0.94 capreomycin Uncertain significance
linezolid
rrl 1475899 n.2242G>A non_coding_transcript_exon_variant 0.94 capreomycin Uncertain significance
linezolid
rrl 1475916 n.2259C>G non_coding_transcript_exon_variant 0.58 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475916 n.2259C>T non_coding_transcript_exon_variant 0.36 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475943 n.2286G>A non_coding_transcript_exon_variant 0.93 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475952 n.2295A>G non_coding_transcript_exon_variant 0.92 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475963 n.2306G>A non_coding_transcript_exon_variant 0.26 capreomycin
linezolid
rrl 1475970 n.2313C>T non_coding_transcript_exon_variant 0.68 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475975 n.2318C>T non_coding_transcript_exon_variant 0.21 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475977 n.2320A>G non_coding_transcript_exon_variant 0.91 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475978 n.2321C>T non_coding_transcript_exon_variant 0.9 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475988 n.2331A>G non_coding_transcript_exon_variant 0.9 capreomycin Not assoc w R
linezolid Uncertain significance
rrl 1475989 n.2332T>G non_coding_transcript_exon_variant 0.16 capreomycin
linezolid
rrl 1475990 n.2333G>C non_coding_transcript_exon_variant 0.16 capreomycin
linezolid
rrl 1475997 n.2340A>G non_coding_transcript_exon_variant 0.17 capreomycin
linezolid
rrl 1475998 n.2341C>T non_coding_transcript_exon_variant 0.16 capreomycin
linezolid Uncertain significance
rrl 1476001 n.2344T>C non_coding_transcript_exon_variant 0.7 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476030 n.2373A>G non_coding_transcript_exon_variant 0.62 capreomycin Uncertain significance
linezolid
rrl 1476032 n.2375C>A non_coding_transcript_exon_variant 0.64 capreomycin
linezolid
rrl 1476034 n.2377C>T non_coding_transcript_exon_variant 0.64 capreomycin
linezolid
rrl 1476036 n.2379A>G non_coding_transcript_exon_variant 0.64 capreomycin
linezolid
rrl 1476043 n.2386T>C non_coding_transcript_exon_variant 0.64 capreomycin
linezolid
rrl 1476047 n.2390G>T non_coding_transcript_exon_variant 0.65 capreomycin
linezolid
rrl 1476049 n.2392C>T non_coding_transcript_exon_variant 0.68 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476056 n.2399G>A non_coding_transcript_exon_variant 0.66 capreomycin Not assoc w R
linezolid Uncertain significance
rrl 1476076 n.2419A>G non_coding_transcript_exon_variant 0.51 capreomycin
linezolid
rrl 1476115 n.2458T>C non_coding_transcript_exon_variant 0.55 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476130 n.2473G>A non_coding_transcript_exon_variant 0.76 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476131 n.2474C>T non_coding_transcript_exon_variant 0.76 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476160 n.2503T>C non_coding_transcript_exon_variant 0.3 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476164 n.2507A>G non_coding_transcript_exon_variant 0.92 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476165 n.2508T>A non_coding_transcript_exon_variant 0.63 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476165 n.2508T>G non_coding_transcript_exon_variant 0.3 capreomycin Not assoc w R
linezolid Uncertain significance
rrl 1476194 n.2537A>G non_coding_transcript_exon_variant 0.96 capreomycin Not assoc w R
linezolid Uncertain significance
rrl 1476200 n.2543A>T non_coding_transcript_exon_variant 0.96 capreomycin Not assoc w R
linezolid Uncertain significance
rrl 1476201 n.2544C>T non_coding_transcript_exon_variant 0.96 capreomycin Not assoc w R
linezolid Uncertain significance
rrl 1476213 n.2556G>T non_coding_transcript_exon_variant 0.57 capreomycin
linezolid
rrl 1476214 n.2557G>T non_coding_transcript_exon_variant 0.94 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476215 n.2558C>T non_coding_transcript_exon_variant 0.58 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476224 n.2567A>G non_coding_transcript_exon_variant 0.94 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476245 n.2588C>T non_coding_transcript_exon_variant 0.91 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476251 n.2594T>A non_coding_transcript_exon_variant 0.86 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476252 n.2595T>G non_coding_transcript_exon_variant 0.85 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476256 n.2599A>T non_coding_transcript_exon_variant 0.85 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476260 n.2603A>G non_coding_transcript_exon_variant 0.86 capreomycin Not assoc w R
linezolid Uncertain significance
rrl 1476267 n.2610G>C non_coding_transcript_exon_variant 0.85 capreomycin
linezolid
rrl 1476276 n.2619C>G non_coding_transcript_exon_variant 0.78 capreomycin
linezolid
rrl 1476281 n.2624T>C non_coding_transcript_exon_variant 0.69 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476337 n.2680C>T non_coding_transcript_exon_variant 0.36 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476359 n.2702C>G non_coding_transcript_exon_variant 0.97 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476368 n.2711T>C non_coding_transcript_exon_variant 0.51 capreomycin Uncertain significance
linezolid
rrl 1476369 n.2712C>T non_coding_transcript_exon_variant 0.6 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476381 n.2724G>C non_coding_transcript_exon_variant 0.97 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476428 n.2771C>T non_coding_transcript_exon_variant 0.86 capreomycin Not assoc w R
linezolid Uncertain significance
rrl 1476429 n.2772A>C non_coding_transcript_exon_variant 0.43 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476466 n.2809C>T non_coding_transcript_exon_variant 0.94 capreomycin Not assoc w R
linezolid Uncertain significance
rrl 1476506 n.2849T>C non_coding_transcript_exon_variant 0.92 capreomycin Not assoc w R
linezolid Uncertain significance
rrl 1476515 n.2858C>T non_coding_transcript_exon_variant 0.91 capreomycin Uncertain significance
linezolid
rrl 1476517 n.2860C>T non_coding_transcript_exon_variant 0.56 capreomycin Uncertain significance
linezolid
rrl 1476519 n.2862C>T non_coding_transcript_exon_variant 0.35 capreomycin
linezolid Uncertain significance
rrl 1476524 n.2867C>A non_coding_transcript_exon_variant 0.91 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476525 n.2868A>G non_coding_transcript_exon_variant 0.91 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476530 n.2873C>T non_coding_transcript_exon_variant 0.34 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476534 n.2877A>T non_coding_transcript_exon_variant 0.35 capreomycin
linezolid
rrl 1476536 n.2879G>A non_coding_transcript_exon_variant 0.53 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476538 n.2881A>G non_coding_transcript_exon_variant 0.89 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476539 n.2882A>G non_coding_transcript_exon_variant 0.38 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476540 n.2883C>G non_coding_transcript_exon_variant 0.38 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476547 n.2890C>T non_coding_transcript_exon_variant 0.41 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476567 n.2910C>T non_coding_transcript_exon_variant 0.3 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476584 n.2927C>T non_coding_transcript_exon_variant 0.75 capreomycin Not assoc w R
linezolid Uncertain significance
rrl 1476585 n.2928A>G non_coding_transcript_exon_variant 0.75 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476594 n.2937C>A non_coding_transcript_exon_variant 0.69 capreomycin
linezolid
rrl 1476603 n.2946G>T non_coding_transcript_exon_variant 0.73 capreomycin
linezolid
rrl 1476607 n.2950C>T non_coding_transcript_exon_variant 0.75 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476608 n.2951C>G non_coding_transcript_exon_variant 0.75 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476614 n.2957A>T non_coding_transcript_exon_variant 0.72 capreomycin
linezolid
rrl 1476616 n.2959A>G non_coding_transcript_exon_variant 0.72 capreomycin
linezolid
rrl 1476619 n.2962C>T non_coding_transcript_exon_variant 0.72 capreomycin Not assoc w R
linezolid Uncertain significance
rrl 1476628 n.2971T>G non_coding_transcript_exon_variant 0.71 capreomycin
linezolid
rrl 1476629 n.2972C>A non_coding_transcript_exon_variant 0.71 capreomycin Uncertain significance
linezolid
rrl 1476661 n.3004A>G non_coding_transcript_exon_variant 0.5 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476665 n.3008T>G non_coding_transcript_exon_variant 0.44 capreomycin Uncertain significance
linezolid Uncertain significance
rpsA 1833970 c.429G>C synonymous_variant 0.6 pyrazinamide
rpsA 1833979 c.438T>C synonymous_variant 0.59 pyrazinamide
rpsA 1833985 c.444G>C synonymous_variant 0.59 pyrazinamide
rpsA 1833988 c.447C>G synonymous_variant 0.65 pyrazinamide
rpsA 1833991 c.450C>T synonymous_variant 0.67 pyrazinamide
rpsA 1834009 c.468C>T synonymous_variant 0.82 pyrazinamide
rpsA 1834012 c.471G>C synonymous_variant 0.82 pyrazinamide
rpsA 1834015 c.474G>C synonymous_variant 0.82 pyrazinamide
rpsA 1834024 c.483G>C synonymous_variant 0.79 pyrazinamide
rpsA 1834034 p.Ile165Val missense_variant 0.79 pyrazinamide
rpsA 1834069 c.528G>C synonymous_variant 0.79 pyrazinamide
rpsA 1834090 c.549G>T synonymous_variant 0.74 pyrazinamide
rpsA 1834099 c.558C>G synonymous_variant 0.69 pyrazinamide
rpsA 1834105 c.564C>T synonymous_variant 0.56 pyrazinamide
rpsA 1834108 c.567C>G synonymous_variant 0.56 pyrazinamide
rpsA 1834123 c.582C>G synonymous_variant 0.5 pyrazinamide
rpsA 1834210 c.669C>T synonymous_variant 0.52 pyrazinamide
rpsA 1834222 c.681T>C synonymous_variant 0.53 pyrazinamide
rpsA 1834228 c.687C>T synonymous_variant 0.57 pyrazinamide
rpsA 1834231 c.690T>C synonymous_variant 0.39 pyrazinamide
rpsA 1834234 c.693G>C synonymous_variant 0.59 pyrazinamide
rpsA 1834243 c.702G>C synonymous_variant 0.63 pyrazinamide
rpsA 1834246 c.705G>T synonymous_variant 0.46 pyrazinamide
rpsA 1834249 c.708T>C synonymous_variant 0.62 pyrazinamide
rpsA 1834255 c.714C>G synonymous_variant 0.63 pyrazinamide
rpsA 1834261 c.720A>T synonymous_variant 0.58 pyrazinamide
rpsA 1834264 c.723G>C synonymous_variant 0.63 pyrazinamide
rpsA 1834294 c.753G>C synonymous_variant 0.63 pyrazinamide
rpsA 1834298 p.Gln253Glu missense_variant 0.61 pyrazinamide
rpsA 1834327 c.786G>T synonymous_variant 0.81 pyrazinamide
rpsA 1834348 c.807T>C synonymous_variant 0.65 pyrazinamide Not assoc w R - Interim
rpsA 1834354 c.813G>C synonymous_variant 0.75 pyrazinamide Not assoc w R - Interim
rpsA 1834357 c.816T>C synonymous_variant 0.75 pyrazinamide
rpsA 1834361 c.820_822delTTGinsCTC synonymous_variant 0.76 pyrazinamide
rpsA 1834366 c.825A>G synonymous_variant 0.82 pyrazinamide Not assoc w R - Interim
rpsA 1834369 c.828C>T synonymous_variant 0.5 pyrazinamide
rpsA 1834378 c.837T>G synonymous_variant 0.79 pyrazinamide
rpsA 1834387 c.846C>T synonymous_variant 0.33 pyrazinamide
rpsA 1834395 p.Arg285Gln missense_variant 0.85 pyrazinamide
rpsA 1834402 c.861C>T synonymous_variant 0.47 pyrazinamide
rpsA 1834405 c.864C>T synonymous_variant 0.47 pyrazinamide
rpsA 1834408 c.867C>G synonymous_variant 0.36 pyrazinamide
rpsA 1834411 c.870T>C synonymous_variant 0.31 pyrazinamide
rpsA 1834411 c.870T>G synonymous_variant 0.54 pyrazinamide
rpsA 1834416 p.Ala292Val missense_variant 0.33 pyrazinamide
rpsA 1834423 c.882G>C synonymous_variant 0.84 pyrazinamide
rpsA 1834427 p.Ile296Val missense_variant 0.46 pyrazinamide Uncertain significance
rpsA 1834447 c.906C>G synonymous_variant 0.51 pyrazinamide
rpsA 1834451 c.910_912delTTGinsCTC synonymous_variant 0.86 pyrazinamide
rpsA 1834468 c.927A>G synonymous_variant 0.86 pyrazinamide
rpsA 1834474 c.933C>G synonymous_variant 0.35 pyrazinamide
rpsA 1834474 c.933C>T synonymous_variant 0.5 pyrazinamide
rpsA 1834483 c.942G>A synonymous_variant 0.47 pyrazinamide
rpsA 1834486 p.Glu315Asp missense_variant 0.86 pyrazinamide
rpsA 1834489 c.948T>C synonymous_variant 0.92 pyrazinamide
rpsA 1834498 c.957C>T synonymous_variant 0.52 pyrazinamide
rpsA 1834501 c.960G>C synonymous_variant 0.82 pyrazinamide
Rv1979c 2223293 c.-129A>G upstream_gene_variant 1.0 bedaquiline Not assoc w R - Interim
clofazimine Not assoc w R
ahpC 2726105 c.-88G>A upstream_gene_variant 1.0 isoniazid Not assoc w R
Rv2477c 2782498 c.1545C>T synonymous_variant 1.0 kanamycin Not assoc w R
levofloxacin Not assoc w R
moxifloxacin Not assoc w R
streptomycin Not assoc w R - Interim
rifampicin Not assoc w R
ethambutol Not assoc w R
amikacin Not assoc w R
ald 3086788 c.-32T>C upstream_gene_variant 1.0 cycloserine
clpC1 4039991 c.714G>T synonymous_variant 0.83 pyrazinamide
clpC1 4040002 p.His235Asn missense_variant 0.82 pyrazinamide
clpC1 4040003 c.702G>C synonymous_variant 0.82 pyrazinamide
clpC1 4040009 c.696C>G synonymous_variant 0.82 pyrazinamide
clpC1 4040021 c.684A>T synonymous_variant 0.82 pyrazinamide
clpC1 4040024 c.681A>G synonymous_variant 0.83 pyrazinamide
clpC1 4040030 c.675C>G synonymous_variant 0.7 pyrazinamide
clpC1 4040033 c.672G>C synonymous_variant 0.85 pyrazinamide
clpC1 4040057 c.648C>T synonymous_variant 0.46 pyrazinamide
clpC1 4040063 c.642G>C synonymous_variant 0.92 pyrazinamide Not assoc w R - Interim
clpC1 4040066 c.639G>T synonymous_variant 0.42 pyrazinamide
clpC1 4040087 c.618G>C synonymous_variant 0.88 pyrazinamide
clpC1 4040090 c.613_615delTCTinsAGC synonymous_variant 0.88 pyrazinamide
clpC1 4040108 c.597G>C synonymous_variant 0.92 pyrazinamide
clpC1 4040126 c.579C>T synonymous_variant 0.77 pyrazinamide Not assoc w R - Interim
clpC1 4040129 c.576C>G synonymous_variant 0.69 pyrazinamide
ethA 4326230 p.Asp415Gly missense_variant 1.0 ethionamide Uncertain significance
whiB6 4338732 c.-211C>T upstream_gene_variant 1.0 kanamycin
capreomycin
amikacin
gid 4407588 c.615A>G synonymous_variant 1.0 streptomycin Not assoc w R