EBG00000313325 - n.1460G>T


Drug resistance types
2 Sensitive 47 RR-TB 20 HR-TB 50 MDR-TB 28 Pre-XDR-TB 0 XDR-TB 255 Other
lineage Counts
lineage Count
lineage4.7;lineage4.3.4.2 2
lineage4.9 42
lineage4.7 12
lineage4.3.4.2 11
lineage4.1.2.1 38
lineage1.1.1.1 1
lineage4.6.2.2 7
lineage1.1.3.2 1
lineage3 32
lineage1.2.2.2 2
lineage4.3 1
lineage3.1.3 4
lineage4.8 28
lineage4.3.1.1 1
lineage4.3.4.2.1 7
lineage4.4.1.1;lineage4.1.2.1 1
La1.6 1
lineage4 16
lineage2.2.2 7
lineage4.1.1 4
lineage4.4.1.1 8
lineage4.2.2.2 3
lineage2.2.1 60
13
lineage4.4.1.1.1 1
lineage2.2.2;lineage2.2.1 1
lineage2.2 1
lineage4.5 3
lineage4.2.2 1
lineage4.4.2 3
lineage2.2.1.1 2
lineage6 2
lineage4.3.3 7
lineage1.2.1.2.1 3
lineage3.1.1 6
lineage4.1.2 7
lineage1.1.3.1 1
lineage4.9;lineage3.1.1 1
lineage4.2.1 2
lineage1.1.2 3
lineage1.2.1.1 1
lineage5 2
lineage4.2.2.1 1
lineage1.1.3 1
lineage3.1 2
lineage4.6.1.2 1
lineage4.6 2
lineage1 2
lineage4.8.1 1
lineage6.3.1 1
lineage4.1.1.3.1 4
lineage4;lineage3 1
lineage3.1.2 2
lineage4.1 1
lineage1.2.2 1
lineage6.1.3 1
lineage4.1.1.3 5
lineage4.1.3 1
lineage4.1.1.2 1
lineage4.2.2.2;lineage3 1
lineage4.4 1
lineage4.8.2 1
lineage3.1.2.2 3
lineage4.9;lineage3 1
lineage1.1.3.3 2
lineage4.6.5 1
lineage4.1.2.1;lineage2.2.1 1
lineage4.3.4.1 6
lineage4.3.2.1 1
lineage4.9;lineage1.1 1
lineage4.3.2 1
lineage4.9;lineage4.1 1
lineage4.9;lineage4.3.4 1
lineage4.3.4 2
lineage4.1.4 1
spoligotype Counts
spoligotype Count
None 402
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR6197021 MDR-TB lineage4.7;lineage4.3.4.2 None
ERR6197022 Other lineage4.9 None
ERR6197023 MDR-TB lineage4.7;lineage4.3.4.2 None
ERR6197026 RR-TB lineage4.9 None
ERR6197030 Other lineage4.9 None
ERR6197025 Other lineage4.7 None
ERR6197032 Other lineage4.9 None
ERR6197031 Other lineage4.7 None
ERR6197029 Other lineage4.7 None
ERR6197033 Other lineage4.7 None
ERR6197035 Other lineage4.7 None
ERR6197039 MDR-TB lineage4.3.4.2 None
ERR6197040 Other lineage4.9 None
ERR6197027 Other lineage4.7 None
ERR6197037 MDR-TB lineage4.3.4.2 None
ERR6197043 MDR-TB lineage4.3.4.2 None
ERR6197044 RR-TB lineage4.9 None
ERR9117699 Other lineage4.1.2.1 None
ERR752012 HR-TB lineage1.1.1.1 None
ERR9117678 Other lineage4.6.2.2 None
ERR6197041 MDR-TB lineage4.3.4.2 None
ERR7821182 Other lineage1.1.3.2 None
ERR9117759 Other lineage3 None
ERR9117732 Other lineage1.2.2.2 None
ERR9117760 HR-TB lineage4.3 None
ERR9117788 Other lineage3 None
ERR9117781 Other lineage3.1.3 None
ERR9117806 Other lineage4.8 None
ERR9117812 Other lineage4.3.1.1 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
SRR1049673 Pre-XDR-TB lineage3 None
SRR1049672 Other lineage3 None
SRR1062871 MDR-TB lineage4.3.4.2.1 None
SRR1049725 RR-TB lineage4.1.2.1 None
SRR1049726 MDR-TB lineage4.4.1.1;lineage4.1.2.1 None
SRR10993951 RR-TB La1.6 None
SRR1062928 RR-TB lineage4 None
SRR1062918 Pre-XDR-TB lineage3 None
SRR10869086 Pre-XDR-TB lineage2.2.2 None
SRR1140753 MDR-TB lineage4.3.4.2.1 None
SRR11342643 MDR-TB lineage4.1.1 None
SRR11342685 HR-TB lineage4.4.1.1 None
SRR11349203 MDR-TB lineage4.4.1.1 None
SRR1140716 Pre-XDR-TB lineage3 None
SRR11342688 Other lineage4.2.2.2 None
SRR11349207 RR-TB lineage2.2.1 None
SRR1140736 RR-TB None
SRR1173170 Other lineage4.9 None
SRR1173281 RR-TB lineage3 None
SRR1173320 Pre-XDR-TB lineage4.4.1.1.1 None
SRR1173740 Other None
SRR18002875 MDR-TB lineage2.2.2 None
SRR1173770 Other lineage4.9 None
SRR18002874 MDR-TB lineage2.2.1 None
SRR18002906 Pre-XDR-TB lineage2.2.1 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
SRR18002891 MDR-TB lineage2.2.1 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR18002876 MDR-TB lineage2.2.2;lineage2.2.1 None
SRR18002909 MDR-TB lineage2.2.1 None
SRR18002930 MDR-TB lineage2.2.1 None
SRR18002926 Other lineage2.2.1 None
SRR18002935 Pre-XDR-TB lineage2.2.1 None
SRR18002929 HR-TB lineage2.2.1 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR18002937 Other lineage2.2.1 None
SRR18002945 RR-TB lineage2.2.1 None
SRR18002941 RR-TB lineage2.2.1 None
SRR18002948 Other lineage2.2 None
SRR18002963 Other lineage2.2.1 None
SRR18002964 Other lineage2.2.1 None
SRR18002956 HR-TB lineage2.2.1 None
SRR18002976 Other lineage2.2.1 None
SRR18002967 Pre-XDR-TB lineage2.2.1 None
SRR18002974 Pre-XDR-TB lineage2.2.1 None
SRR18003007 MDR-TB lineage4.5 None
SRR18002981 Other lineage2.2.1 None
SRR18002980 Other lineage2.2.1 None
SRR18002987 Other lineage2.2.1 None
SRR18002994 MDR-TB lineage4.2.2 None
SRR18002984 MDR-TB lineage2.2.2 None
SRR18002995 Other lineage4.4.2 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
SRR18002999 Pre-XDR-TB lineage2.2.1 None
SRR18003009 MDR-TB lineage2.2.1 None
SRR18003002 MDR-TB lineage2.2.1 None
SRR18003013 Pre-XDR-TB lineage4.4.2 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR18003024 RR-TB lineage2.2.1 None
SRR18003012 Pre-XDR-TB lineage2.2.1 None
SRR18003023 Other lineage2.2.1 None
SRR18003027 Other lineage2.2.1 None
SRR18003015 MDR-TB lineage2.2.1 None
SRR18003030 Pre-XDR-TB lineage2.2.1 None
SRR18003032 Other lineage2.2.1 None
SRR18003042 Other lineage2.2.1 None
SRR18003038 Other lineage2.2.1 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR18003049 Other lineage2.2.1 None
SRR18003045 Other lineage2.2.1 None
SRR18003044 MDR-TB lineage2.2.1 None
SRR19303773 Other lineage4.6.2.2 None
SRR18003046 MDR-TB lineage2.2.1 None
SRR18003052 Other lineage2.2.1.1 None
SRR21595944 Other lineage2.2.1 None
SRR19303815 Other lineage4.8 None
SRR19304094 Other lineage6 None
SRR19303796 Other lineage4.3.3 None
SRR19303818 Other lineage4.3.4.2 None
SRR19303820 RR-TB lineage4.8 None
SRR19303899 Other lineage3 None
SRR19303907 Other lineage4.8 None
SRR19304104 Other lineage4.8 None
SRR21595935 Other lineage2.2.1 None
SRR22424778 RR-TB lineage2.2.1.1 None
SRR21727760 Other lineage2.2.1 None
SRR21728726 HR-TB lineage1.2.1.2.1 None
ERR4814700 Other lineage4.3.3 None
ERR4815197 Other lineage4 None
SRR3675474 Other lineage4.1.1 None
ERR4815334 Other lineage3.1.1 None
ERR4814496 RR-TB lineage4.1.2 None
ERR4815104 Other lineage4.8 None
ERR4815121 HR-TB lineage4.6.2.2 None
ERR4815193 MDR-TB lineage4.8 None
ERR4815268 Other lineage4.8 None
SRR3675491 Other lineage4.7 None
ERR4814617 Other lineage1.1.3.1 None
ERR4814714 Other lineage3 None
SRR3675265 Other lineage4 None
ERR171142 Other lineage4.9;lineage3.1.1 None
SRR3675230 RR-TB lineage3 None
ERR4814790 Other lineage4.2.1 None
ERR4815910 Other lineage4.1.2.1 None
ERR4813263 MDR-TB lineage4.8 None
ERR4815572 Other lineage4.1.2.1 None
ERR4814874 MDR-TB lineage1.1.2 None
ERR4815036 Sensitive lineage4.8 None
ERR4815577 Other lineage3.1.3 None
ERR4815080 Other lineage4.1.2.1 None
ERR4815849 Other lineage3.1.1 None
ERR2446456 HR-TB lineage4.4.1.1 None
SRR3675509 Other lineage4.9 None
SRR3675510 Other None
ERR2027209 MDR-TB lineage1.2.1.1 None
ERR4816967 RR-TB lineage5 None
SRR3675513 Other lineage4.8 None
ERR4816009 Other lineage1.1.2 None
ERR4817015 MDR-TB lineage4.2.2.1 None
ERR2027255 HR-TB lineage4.4.1.1 None
ERR4816093 Other lineage1.1.3 None
ERR4816101 Other lineage4.1.2.1 None
ERR2027257 Other lineage4.1.2.1 None
ERR2027290 RR-TB lineage3.1 None
SRR3675565 Other lineage3 None
ERR4816464 Other lineage3 None
ERR4816310 HR-TB lineage4.6.1.2 None
SRR5485513 RR-TB None
ERR4816531 Other lineage4.1.2 None
ERR4816604 RR-TB lineage4.1.2 None
ERR4816831 Other lineage4.1.2.1 None
ERR4816510 Other lineage4.1.2.1 None
ERR4816562 Other lineage4 None
ERR4817175 Other lineage4.8 None
ERR4816699 Other lineage4.6 None
ERR4816745 Pre-XDR-TB lineage2.2.1 None
ERR4817665 Other lineage4.8 None
ERR2513589 Other lineage3.1.3 None
SRR5485526 RR-TB None
ERR4817735 Other lineage4.8 None
ERR4818988 Other lineage1 None
ERR4818663 Other lineage3 None
ERR4817917 Other lineage2.2.1 None
ERR4816425 Other lineage2.2.2 None
ERR4817826 RR-TB lineage4.5 None
ERR4819002 HR-TB lineage4.8 None
SAMN02380982 MDR-TB lineage4.3.4.2 None
ERR4817853 Other lineage4.8.1 None
ERR4817958 Other lineage4.2.1 None
ERR4818752 Other lineage3 None
ERR4819007 Other lineage2.2.1 None
ERR2510794 Other lineage4.3.4.2 None
ERR4819017 RR-TB lineage3 None
ERR4818065 Other lineage4.1.2.1 None
ERR4818797 Other lineage4.5 None
ERR4818810 Other lineage2.2.1 None
ERR4818126 RR-TB lineage1 None
ERR4818825 HR-TB lineage4.1.2.1 None
ERR4818522 Pre-XDR-TB lineage3 None
ERR4818173 Other lineage2.2.1 None
ERR4818890 Other lineage4.7 None
ERR4818176 Other lineage4.1.2.1 None
ERR4818440 Other lineage6.3.1 None
ERR4818574 Other lineage6 None
SRR5007161 RR-TB lineage4.1.1.3.1 None
SRR5007167 RR-TB lineage4.1.1.3.1 None
SRR5007163 MDR-TB lineage4;lineage3 None
ERR4819087 Other lineage4.3.3 None
SRR5007170 RR-TB lineage4.9 None
ERR2513348 Other lineage3 None
ERR4817555 RR-TB lineage3 None
SRR5007204 Other lineage4.1.2.1 None
ERR4819093 Other lineage4.3.3 None
ERR4819198 Other lineage2.2.1 None
ERR4819192 Other lineage3 None
ERR4820290 Other lineage3 None
ERR4820713 HR-TB lineage4.8 None
ERR4819456 Other lineage4.8 None
ERR4819383 RR-TB lineage4.9 None
SRR5485511 MDR-TB None
ERR2514181 Other lineage1.2.1.2.1 None
ERR4820742 Other lineage4.3.4.2.1 None
ERR4819491 Other lineage4.1.2.1 None
ERR4819525 Other lineage3 None
ERR4819615 Other lineage4.3.4.2.1 None
ERR4819555 Other lineage4.8 None
ERR4820408 Other lineage4.1.2.1 None
ERR4819636 Other lineage3.1.2 None
ERR4819641 HR-TB lineage4.6.2.2 None
ERR4819766 Other lineage4.4.1.1 None
ERR4819706 MDR-TB lineage4.3.4.2 None
ERR4819830 Other lineage2.2.1 None
ERR4819765 Other lineage4.1 None
ERR4820801 Other lineage1.2.2 None
ERR4819948 Other lineage4.4.1.1 None
ERR4819863 RR-TB lineage4.9 None
SRR5485522 MDR-TB None
ERR2514854 Other lineage4.3.3 None
ERR4820827 Other lineage4.1.2 None
ERR4820572 Other lineage1.2.1.2.1 None
ERR4820075 Other lineage4.1.2.1 None
ERR4820026 Other lineage3 None
ERR4820030 Other lineage4.9 None
ERR4820833 HR-TB None
ERR4820107 RR-TB None
ERR4820161 Other lineage3 None
ERR4820959 Other lineage4.1.2.1 None
ERR4821791 HR-TB lineage4.1.2.1 None
ERR4821020 Other lineage4.1.1.3.1 None
SRR6045516 Other lineage3.1.1 None
ERR4821054 Other lineage3 None
SRR6045496 Other lineage6.1.3 None
SRR6045464 Other lineage4.1.1.3 None
SRR6045485 Other lineage4.9 None
SRR6046117 RR-TB lineage4.9 None
ERR4821286 Other lineage4.8 None
SRR6045553 RR-TB lineage4.9 None
ERR4821172 RR-TB lineage4.9 None
ERR4821272 RR-TB lineage4.1.2.1 None
ERR4821310 Other lineage5 None
ERR4821288 Other lineage4.7 None
ERR4821334 RR-TB lineage4.1.3 None
ERR4822035 Other lineage4.8 None
ERR4822114 Other lineage4.1.2.1 None
ERR4821372 Other lineage4.1.2.1 None
ERR4822176 Other lineage4.1.1.2 None
SRR6045603 RR-TB lineage4.1.1.3 None
ERR4821595 Other lineage4.1.1.3 None
SRR6045565 Other lineage4.6.2.2 None
SRR6046210 Other lineage4 None
SRR6045613 Other lineage3.1.3 None
SRR6045614 Other lineage4.8 None
SRR6045778 Other lineage3.1 None
SRR5818586 RR-TB lineage4.2.2.2 None
SRR6045621 Other lineage4.1.1.3 None
SRR6045763 Pre-XDR-TB lineage2.2.1 None
SRR5818630 Other lineage2.2.1 None
SRR5818694 RR-TB lineage4.2.2.2;lineage3 None
SRR5818647 RR-TB lineage4.3.4.2.1 None
SRR6045849 Other lineage4.4.1.1 None
SRR6045843 Other lineage4.2.2.2 None
SRR6044983 Other lineage3.1.1 None
SRR6044769 Other lineage1.1.2 None
SRR6045928 Other lineage4.9 None
SRR6045944 Other lineage4.1.2.1 None
SRR6044787 Other lineage4.4 None
SRR6044817 Other lineage3 None
SRR6044838 Other lineage4.9 None
SRR6044841 Other lineage4.9 None
SRR6045909 Other lineage4.8 None
SRR6044873 Other lineage4.1.1.3.1 None
SRR6044993 Other lineage3 None
SRR6045952 HR-TB None
SRR6045138 Other lineage3.1.1 None
SRR6046159 Other lineage4.8.2 None
SRR6045986 Other lineage3 None
SRR6046173 Other lineage3 None
SRR6045295 Other lineage4.7 None
SRR6046015 Other lineage4.9 None
SRR6046177 Other lineage3.1.2 None
SRR6046020 Other lineage3 None
SRR6045178 Other lineage3 None
SRR6045175 Other lineage3.1.2.2 None
SRR6046239 Other lineage4.9;lineage3 None
SRR6045312 Other lineage1.1.3.3 None
SRR6045379 Other None
SRR6045384 Other lineage4.1.2 None
SRR6046275 Other lineage3.1.1 None
SRR6046359 Other lineage4.7 None
ERR2851354 RR-TB lineage4.9 None
SRR6046343 Other lineage2.2.1 None
ERR4829289 Other lineage4.1.2.1 None
ERR4830549 MDR-TB lineage4.1.1.3 None
SRR6046440 Other lineage3.1.2.2 None
ERR4829359 Other lineage4.7 None
SRR6046442 Other lineage3 None
SRR6046655 Other lineage4.1.2.1 None
SRR6046463 Other lineage4.4.1.1 None
SRR6046482 HR-TB None
SRR6046517 Other lineage4.8 None
SRR6046484 Other lineage1.2.2.2 None
SRR6046701 Other lineage3.1.2.2 None
ERR502472 Other lineage4.6.2.2 None
SRR6046729 Other None
SRR6046737 Other lineage4.9 None
SRR6046848 Other lineage4.6.5 None
SRR6046852 MDR-TB lineage3 None
SRR6046802 Other lineage4 None
SRR6367397 Other lineage4.1.2.1 None
ERR502481 Pre-XDR-TB lineage4.9 None
ERR502474 Pre-XDR-TB lineage4.9 None
ERR502479 RR-TB lineage4.9 None
ERR502473 Pre-XDR-TB lineage4.9 None
ERR502478 RR-TB lineage4.9 None
SRR7131028 Other lineage4.8 None
ERR4863405 Pre-XDR-TB lineage4.1.2.1;lineage2.2.1 None
ERR2984800 Pre-XDR-TB lineage4.3.4.1 None
SRR7131026 Other lineage2.2.1 None
SRR7131149 Pre-XDR-TB lineage4.8 None
SRR7131061 Other lineage2.2.1 None
SRR7131123 Other lineage4.8 None
SRR7131145 Other lineage4.1.2.1 None
SRR7131068 Other lineage4.8 None
SRR7131075 Other lineage4.8 None
SRR7131152 MDR-TB lineage2.2.1 None
SRR7131147 Other lineage4.1.2.1 None
SRR7131236 Other lineage4.3.4.2 None
SRR7131169 Other lineage4.1.2.1 None
SRR7131182 Other lineage4.1.2.1 None
SRR7131230 HR-TB lineage4.3.4.2 None
SRR7131195 Other lineage2.2.1 None
SRR7131216 Other lineage4.1.2.1 None
SRR7131229 Other lineage4.1.2.1 None
SRR7131237 Other lineage2.2.1 None
SRR7131275 Other lineage4.1.2.1 None
SRR9971168 Other lineage4.3.2.1 None
SRR8651633 Pre-XDR-TB lineage4.4.2 None
SRR9971372 MDR-TB lineage4.1.1 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR7765062 Pre-XDR-TB lineage4.1.2.1 None
DRR184629 Other lineage2.2.1 None
ERR10796555 Other lineage4.1.2.1 None
DRR185024 Other lineage2.2.2 None
ERR10219876 Other lineage4.3.4.2 None
ERR10796553 Other lineage4.9;lineage1.1 None
ERR10796557 Other lineage4 None
ERR10796556 Other lineage4.3.4.1 None
ERR10796561 Other lineage4.3.2 None
ERR10796560 MDR-TB lineage4.9;lineage4.1 None
ERR10796559 Other lineage4.9 None
ERR10796568 Other lineage4.9 None
ERR10796562 Other lineage4.3.4.1 None
ERR10796566 Other lineage4.9;lineage4.3.4 None
ERR10796577 RR-TB lineage4.9 None
ERR10796572 Other lineage4.3.4.1 None
ERR10796571 Other lineage4.9 None
ERR10796581 HR-TB lineage4.1.2 None
ERR10796580 RR-TB lineage4.6 None
ERR10796591 MDR-TB lineage4.9 None
ERR10796588 Other lineage4 None
ERR10796589 Other lineage4.9 None
ERR10796590 Other lineage4.9 None
ERR10796594 Other lineage4.9 None
ERR10796592 Other lineage4 None
ERR10796593 RR-TB lineage4 None
ERR10796615 Other lineage4 None
ERR10796596 Other lineage4.9 None
ERR10796598 RR-TB lineage4.9 None
ERR10796617 Other lineage4.3.4.1 None
ERR10796599 Other lineage4 None
ERR10796620 Other lineage4.1.1 None
ERR10796618 Other lineage4.3.4.1 None
ERR10796626 Other lineage4.1.2 None
ERR10796628 Other lineage4.3.3 None
ERR10796627 Other lineage4 None
ERR10796631 Other lineage4.3.4 None
ERR10796629 Other lineage4 None
ERR10796633 RR-TB lineage4.3.4 None
ERR10796634 Other lineage4 None
ERR10796636 Other lineage4.1.2.1 None
ERR3283043 Other lineage4.9 None
ERR10796640 Other lineage4.1.2.1 None
ERR10796635 Other lineage4 None
ERR3283008 Other lineage4.9 None
ERR3324325 MDR-TB lineage4.6.2.2 None
ERR3283051 Other lineage4.9 None
ERR3324351 MDR-TB lineage4.1.4 None
ERR4769525 Sensitive lineage4.9 None
ERR4457829 MDR-TB lineage4.1.2.1 None
ERR4024582 MDR-TB lineage4.1.2.1 None
ERR4798769 Other lineage1.1.3.3 None