EBG00000313325 - n.1460G>T
Drug resistance types
0 Sensitive
30 RR-TB
9 HR-TB
41 MDR-TB
20 Pre-XDR-TB
0 XDR-TB
158 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1;lineage4.9 | 3 |
| lineage4.9 | 46 |
| lineage3 | 19 |
| lineage2.2.2 | 5 |
| lineage4.3.4.2 | 7 |
| lineage2.2.1 | 51 |
| lineage4.1.2.1 | 17 |
| lineage4.3.4.2.1 | 6 |
| lineage2.2.1.1 | 3 |
| lineage4.1.1.3.1 | 2 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage4.3.4.1 | 3 |
| lineage4.3.3 | 5 |
| lineage4.6.2.2 | 1 |
| lineage4.4.2 | 3 |
| lineage4.2.1 | 2 |
| lineage4.8 | 15 |
| lineage3.1.2.2 | 1 |
| lineage4.3.4.2;lineage4.7 | 1 |
| lineage4.2.2.2 | 4 |
| lineage4.7 | 4 |
| lineage4.1.2 | 1 |
| lineage3.1.3 | 1 |
| lineage4.2.1.1 | 1 |
| lineage6.1.2 | 1 |
| lineage3;lineage4 | 2 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage1.1.3.3 | 1 |
| lineage4.3.4.1;lineage4.9 | 1 |
| lineage4.5 | 1 |
| lineage3.1.1;lineage4.9 | 1 |
| lineage4.3 | 1 |
| lineage4.4.1.1 | 6 |
| lineage4.4.1.1.1 | 1 |
| lineage4.1.1.3 | 3 |
| lineage1.1.3.2 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.1.3 | 1 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage4.8.2 | 1 |
| lineage1.2.1.1 | 1 |
| lineage2.2.1;lineage2.2.2 | 1 |
| lineage3;lineage4.9 | 1 |
| lineage4.1.1.1 | 4 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.8.1 | 3 |
| lineage4.6.5 | 1 |
| lineage3.1.1 | 2 |
| lineage4.1;lineage4.9 | 1 |
| La3 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.3.2 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1.6 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4 | 2 |
| lineage2.2.1;lineage4.1.2.1 | 1 |
| lineage3.1.2 | 1 |
| lineage4.3.4.2;lineage4.9 | 1 |
| lineage4.2.2 | 1 |
| lineage1.1.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 258 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | SRR5485522 | RR-TB | lineage4.9 | None | SRR7069074 | Other | lineage3 | None | ERR10796598 | Other | lineage4.9 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR7069027 | MDR-TB | lineage4.3.4.2 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR867573 | Other | lineage4.9 | None | SRR1062918 | Other | lineage3 | None | SRR18002987 | Other | lineage2.2.1 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR10796577 | Other | lineage4.9 | None | SRR6046442 | Other | lineage3 | None | SRR1735598 | RR-TB | lineage4.9 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR11342646 | HR-TB | lineage3 | None | SRR1173281 | Other | lineage3 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR12062533 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR6044873 | Other | lineage4.1.1.3.1 | None | ERR10796627 | Other | lineage4.1.2.1;lineage4.9 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | ERR10796591 | Other | lineage4.9 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | ERR10796562 | Other | lineage4.3.4.1 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR6046440 | Other | lineage3.1.2.2 | None | ERR502481 | RR-TB | lineage4.9 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR18002974 | Other | lineage2.2.1 | None | ERR6197023 | MDR-TB | lineage4.3.4.2;lineage4.7 | None | ERR10796594 | Other | lineage4.9 | None | ERR10796640 | Other | lineage4.1.2.1 | None | ERR10796628 | Other | lineage4.3.3 | None | SRR6045843 | Other | lineage4.2.2.2 | None | SRR7131229 | Other | lineage4.1.2.1 | None | ERR10796626 | Other | lineage4.1.2.1 | None | SRR7131123 | Other | lineage4.8 | None | ERR4821172 | RR-TB | lineage4.9 | None | SRR6046117 | Other | lineage4.9 | None | SRR7069835 | Other | lineage2.2.1 | None | ERR10796634 | Other | lineage4.7 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | ERR867575 | Other | lineage4.9 | None | ERR867569 | Other | lineage4.9 | None | ERR10796581 | Other | lineage4.1.2 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR10796618 | Other | lineage4.3.4.1 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR6045553 | Other | lineage4.1.2.1;lineage4.9 | None | SRR6045613 | Other | lineage3.1.3 | None | SRR7070521 | Other | lineage4.2.1.1 | None | SRR7131230 | HR-TB | lineage4.3.4.2 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR18002937 | Other | lineage2.2.1 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | SRR19304094 | Other | lineage6.1.2 | None | SRR3675230 | Other | lineage3;lineage4 | None | SRR3675389 | Other | lineage4.9 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR5485526 | RR-TB | lineage4.9 | None | SRR6046020 | Other | lineage3 | None | ERR502479 | RR-TB | lineage4.9 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR19304104 | Other | lineage4.8 | None | ERR4798769 | Other | lineage1.1.3.3 | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | SRR18003007 | MDR-TB | lineage4.5 | None | SRR18003027 | Other | lineage2.2.1 | None | ERR10796596 | Other | lineage4.9 | None | SRR6046802 | Other | lineage4.9 | None | DRR184629 | Other | lineage2.2.1 | None | ERR171142 | Other | lineage3.1.1;lineage4.9 | None | ERR10796593 | Other | lineage4.3 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | ERR2027255 | HR-TB | lineage4.4.1.1 | None | DRR185024 | Other | lineage2.2.2 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR7131182 | Other | lineage4.1.2.1 | None | SRR18002964 | Other | lineage2.2.1 | None | ERR10796553 | Other | lineage4.9 | None | SRR18002980 | Other | lineage2.2.1 | None | SRR18003032 | Other | lineage2.2.1 | None | ERR4830549 | MDR-TB | lineage4.1.1.3 | None | ERR7821182 | Other | lineage1.1.3.2 | None | SRR18003052 | Other | lineage2.2.1.1 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | SRR9971168 | Other | lineage4.3.2.1 | None | ERR10796566 | Other | lineage4.9 | None | SRR7070144 | Other | lineage4.8 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR18002956 | Other | lineage2.2.1 | None | SRR18003045 | Other | lineage2.2.1 | None | SRR19303907 | Other | lineage4.8 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | ERR867544 | Other | lineage4.9 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR6045986 | Other | lineage3 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | SRR1140716 | Other | lineage3 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | SRR5007204 | Other | lineage4.1.2.1 | None | SRR7068941 | Other | lineage4.8.2 | None | SRR5485513 | RR-TB | lineage4.9 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342684 | HR-TB | lineage4.4.1.1 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR7070553 | Other | lineage3 | None | SRR7070315 | Other | lineage4.8 | None | SRR1140753 | RR-TB | lineage4.3.4.2.1 | None | SRR18002995 | Other | lineage4.4.2 | None | SRR11342669 | Other | lineage4.8 | None | SRR18002876 | MDR-TB | lineage2.2.1;lineage2.2.2 | None | SRR5007163 | Other | lineage3;lineage4.9 | None | ERR10796571 | Other | lineage4.9 | None | ERR10796589 | Other | lineage4.9 | None | SRR3675491 | Other | lineage4.7 | None | SRR18003038 | Other | lineage2.2.1 | None | ERR10796559 | Other | lineage4.9 | None | SRR7069946 | Other | lineage4.8 | None | SRR1049672 | Other | lineage3 | None | SRR6045603 | Other | lineage4.1.1.3 | None | SRR7131147 | Other | lineage4.1.2.1 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR18003044 | MDR-TB | lineage2.2.1 | None | ERR10796615 | Other | lineage4.3.3;lineage4.9 | None | ERR867554 | Other | lineage4.3.4.1 | None | SRR7070293 | Other | lineage4.8 | None | ERR502473 | RR-TB | lineage4.9 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR6046484 | Other | lineage1.2.2.2 | None | SRR11342688 | Other | lineage4.2.2.2 | None | SRR6044841 | Other | lineage4.9 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18002945 | Other | lineage2.2.1 | None | ERR867572 | Other | lineage4.9 | None | SRR7070329 | Other | lineage3 | None | SRR12062542 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR7070087 | Other | lineage4.8.1 | None | SRR7069251 | Other | lineage3 | None | ERR9117788 | Other | lineage3 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR19303815 | Other | lineage4.8 | None | SRR11349203 | MDR-TB | lineage4.4.1.1 | None | SRR6046848 | Other | lineage4.6.5 | None | ERR2600422 | MDR-TB | lineage2.2.1 | None | SRR11342685 | HR-TB | lineage4.4.1.1 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | ERR3283043 | Other | lineage4.9 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173740 | Other | lineage3;lineage4 | None | ERR10796568 | Other | lineage4.9 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | ERR6197029 | Other | lineage4.7 | None | ERR867571 | Other | lineage4.9 | None | SRR6045384 | Other | lineage4.1.2.1 | None | SRR7131195 | Other | lineage2.2.1 | None | ERR4819863 | RR-TB | lineage4.9 | None | SRR19303899 | Other | lineage3 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR7131275 | Other | lineage4.1.2.1 | None | SRR7070134 | Other | lineage3.1.1 | None | SRR5485525 | RR-TB | lineage4.9 | None | SRR11349207 | RR-TB | lineage2.2.1 | None | ERR3283008 | Other | lineage4.9 | None | ERR10796635 | Other | lineage4.8 | None | SRR1173770 | Other | lineage4.9 | None | ERR10796555 | Other | lineage4.1.2.1 | None | ERR10796629 | Other | lineage4.1;lineage4.9 | None | SRR10321138 | Other | La3 | None | SRR9971372 | MDR-TB | lineage4.1.1.1 | None | ERR10796599 | Other | lineage4.8 | None | SRR6045909 | Other | lineage4.8.1 | None | ERR10796592 | Other | lineage4.9 | None | SRR1140736 | Other | lineage4.1.2.1 | None | SRR7069097 | Other | lineage3.1.2.1 | None | SRR7069314 | Other | lineage3 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | ERR10796561 | Other | lineage4.3.2 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR6045952 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR1173170 | Other | lineage4.9 | None | SRR12062493 | Pre-XDR-TB | lineage4.4.2 | None | ERR10796560 | Other | lineage4.9 | None | SRR10993951 | RR-TB | La1.6 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003009 | MDR-TB | lineage2.2.1 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | ERR502474 | RR-TB | lineage4.9 | None | SRR7131236 | Other | lineage4.3.4.2 | None | SRR3675265 | Other | lineage4 | None | SRR3675565 | Other | lineage4 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR6046210 | Other | lineage4.9 | None | ERR10796633 | Other | lineage4.3.4.2 | None | ERR867526 | MDR-TB | lineage2.2.1 | None | ERR867538 | Other | lineage4.2.2.2 | None | ERR867555 | Other | lineage3 | None | SRR7070446 | Other | lineage3 | None | ERR4863405 | Pre-XDR-TB | lineage2.2.1;lineage4.1.2.1 | None | ERR10796620 | Other | lineage4.1.1.1 | None | ERR867574 | Other | lineage4.9 | None | SRR19303796 | Other | lineage4.3.3 | None | ERR867567 | RR-TB | lineage3 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR7069082 | Other | lineage4.1.2.1 | None | SRR19303818 | Other | lineage4.3.4.2 | None | SRR6045516 | Other | lineage3.1.1 | None | SRR3675582 | Other | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR18002948 | Other | lineage2.2.1 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | SRR3675509 | Other | lineage4.9 | None | SRR6046177 | Other | lineage3.1.2 | None | SRR6046359 | Other | lineage4.7 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR7131145 | Other | lineage4.1.2.1 | None | SRR11342643 | MDR-TB | lineage4.1.1.1 | None | SRR5485510 | RR-TB | lineage4.9 | None | SRR18002909 | MDR-TB | lineage2.2.1 | None | SRR18003049 | Other | lineage2.2.1 | None | ERR4813263 | MDR-TB | lineage4.8 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | ERR10796631 | Other | lineage4.3.4.2;lineage4.9 | None | SRR6045944 | Other | lineage4.1.2.1 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR7070154 | Other | lineage4.4.1.1 | None | SRR5485511 | RR-TB | lineage4.9 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR18002999 | Pre-XDR-TB | lineage2.2.1 | None |
|---|
