TB-Profiler result

Run: SRR5818647

Summary

Run ID: SRR5818647

Sample name:

Date: 04-04-2023 11:40:56

Number of reads: 1210541

Percentage reads mapped: 31.16

Strain: lineage4.3.4.2.1

Drug-resistance: RR-TB


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Drug resistance: This table reports drug-resistance associated mutations found in known resistance genes
Drug Resistance Supporting mutations
Lineage Table: The lineage is inferred by analysing lineage specific SNPs
Lineage Family Main Spoligotype RDs Frequency
lineage4 Euro-American LAM;T;S;X;H None 1.0
lineage4.3 Euro-American (LAM) mainly-LAM None 1.0
lineage4.3.4 Euro-American (LAM) LAM RD174 1.0
lineage4.3.4.2 Euro-American (LAM) LAM1;LAM4;LAM11 RD174 1.0
lineage4.3.4.2.1 Euro-American (LAM) LAM11 RD174 1.0
Drug resistance-Associated Mutations: This table reports mutations found in candidate resistance genes which have been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs
rpoB 761127 p.Ser441Ala missense_variant 0.17 rifampicin
rpoB 761196 p.Leu464Met missense_variant 0.13 rifampicin
rrs 1472644 n.799C>T non_coding_transcript_exon_variant 0.48 streptomycin
rrs 1472733 n.888G>A non_coding_transcript_exon_variant 0.15 streptomycin
rrs 1473247 n.1402C>A non_coding_transcript_exon_variant 0.74 kanamycin, capreomycin, aminoglycosides, amikacin
rrs 1473329 n.1484G>T non_coding_transcript_exon_variant 0.72 kanamycin, capreomycin, aminoglycosides, amikacin
Non-Associated Mutations: This table reports mutations found in candidate resistance genes which have not been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction
gyrB 6140 p.Val301Leu missense_variant 1.0
gyrA 7362 p.Glu21Gln missense_variant 1.0
gyrA 7585 p.Ser95Thr missense_variant 1.0
gyrA 9304 p.Gly668Asp missense_variant 1.0
rpoB 761102 c.1296A>G synonymous_variant 0.13
rpoB 761132 c.1326G>T synonymous_variant 0.12
rpoB 761133 c.1327T>C synonymous_variant 0.16
rpoB 761150 c.1344A>T synonymous_variant 0.13
rpoB 761156 c.1350G>C synonymous_variant 0.16
rpoB 761165 c.1359G>C synonymous_variant 0.15
rpoB 761168 c.1362C>G synonymous_variant 0.15
rpoB 761180 c.1374A>C synonymous_variant 0.15
rpoB 761186 p.Glu460Asp missense_variant 0.15
rpoB 761195 c.1389G>C synonymous_variant 0.13
rpoB 761552 c.1746G>C synonymous_variant 0.12
rpoB 761555 c.1749G>C synonymous_variant 0.12
rpoB 761990 c.2184G>C synonymous_variant 0.17
rpoB 762000 p.Ser732Thr missense_variant 0.14
rpoB 762003 p.Asn733His missense_variant 0.17
rpoB 762026 c.2220G>C synonymous_variant 0.19
rpoB 762035 c.2229G>C synonymous_variant 0.12
rpoB 762053 c.2247T>C synonymous_variant 0.26
rpoB 762057 p.Ile751Val missense_variant 0.16
rpoB 762062 c.2256T>C synonymous_variant 0.16
rpoB 762065 c.2259T>C synonymous_variant 0.26
rpoB 762071 p.Asp755Glu missense_variant 0.12
rpoB 762080 c.2274G>C synonymous_variant 0.14
rpoB 762085 p.Ala760Asp missense_variant 0.15
rpoB 762089 c.2283G>A synonymous_variant 0.15
rpoB 762110 c.2304G>C synonymous_variant 0.11
rpoB 762143 c.2337T>C synonymous_variant 0.12
rpoB 762149 c.2343G>C synonymous_variant 0.15
rpoB 762158 c.2352G>C synonymous_variant 0.23
rpoB 762167 c.2361T>C synonymous_variant 0.24
rpoB 762173 p.Glu789Asp missense_variant 0.21
rpoB 762176 c.2370T>C synonymous_variant 0.27
rpoB 762185 c.2379G>C synonymous_variant 0.3
rpoB 762194 c.2388G>C synonymous_variant 0.3
rpoB 762200 c.2394C>T synonymous_variant 0.3
rpoB 762221 c.2415G>A synonymous_variant 0.27
rpoB 762233 c.2427G>C synonymous_variant 0.26
rpoB 762236 c.2430G>C synonymous_variant 0.26
rpoB 762239 c.2433G>A synonymous_variant 0.22
rpoB 762245 c.2439G>C synonymous_variant 0.27
rpoB 762248 c.2442G>C synonymous_variant 0.22
rpoB 762254 c.2448T>C synonymous_variant 0.27
rpoB 762269 c.2463G>A synonymous_variant 0.24
rpoB 762275 c.2469C>A synonymous_variant 0.23
rpoB 762281 c.2475G>A synonymous_variant 0.24
rpoB 762293 c.2487T>C synonymous_variant 0.22
rpoB 762296 c.2490G>C synonymous_variant 0.2
rpoB 762297 p.Leu831Met missense_variant 0.2
rpoB 762308 c.2502G>C synonymous_variant 0.13
rpoB 762878 p.Ile1024Met missense_variant 0.19
rpoB 762879 p.Met1025Leu missense_variant 0.22
rpoC 762899 c.-471G>C upstream_gene_variant 0.24
rpoB 762905 p.Asp1033Glu missense_variant 0.2
rpoC 762926 c.-444C>G upstream_gene_variant 0.15
rpoC 762929 c.-441G>C upstream_gene_variant 0.43
rpoC 762932 c.-438G>C upstream_gene_variant 0.25
rpoC 762938 c.-432G>T upstream_gene_variant 0.33
rpoC 762947 c.-423C>G upstream_gene_variant 0.18
rpoC 762959 c.-411G>C upstream_gene_variant 0.33
rpoC 762962 c.-408C>T upstream_gene_variant 0.36
rpoC 762971 c.-399G>A upstream_gene_variant 0.4
rpoC 762980 c.-390T>C upstream_gene_variant 0.21
rpoC 762989 c.-381G>C upstream_gene_variant 0.61
rpoC 762995 c.-375G>C upstream_gene_variant 0.57
rpoC 762998 c.-372G>A upstream_gene_variant 0.39
rpoB 763005 p.Cys1067Val missense_variant 0.58
rpoC 763013 c.-357C>A upstream_gene_variant 0.38
rpoB 763014 p.Met1070Leu missense_variant 0.2
rpoB 763017 p.Gln1071Glu missense_variant 0.21
rpoC 763022 c.-348C>A upstream_gene_variant 0.41
rpoC 763028 c.-342T>C upstream_gene_variant 0.18
rpoC 763031 c.-339T>C upstream_gene_variant 0.2
rpoB 763038 p.Thr1078Ala missense_variant 0.19
rpoC 763043 c.-327G>C upstream_gene_variant 0.19
rpoC 763049 c.-321G>A upstream_gene_variant 0.37
rpoC 763053 c.-317T>C upstream_gene_variant 0.21
rpoC 763067 c.-303C>G upstream_gene_variant 0.13
rpoC 763070 c.-300T>C upstream_gene_variant 0.45
rpoB 763074 p.Thr1090Val missense_variant 0.3
rpoB 763077 p.Val1091Thr missense_variant 0.16
rpoC 763088 c.-282C>G upstream_gene_variant 0.29
rpoC 763094 c.-276G>C upstream_gene_variant 0.29
rpoC 763100 c.-270G>A upstream_gene_variant 0.3
rpoC 763103 c.-267G>C upstream_gene_variant 0.34
rpoC 763115 c.-255T>C upstream_gene_variant 0.24
rpoC 763118 c.-252G>A upstream_gene_variant 0.21
rpoB 763130 p.Glu1108Asp missense_variant 0.17
rpoC 763142 c.-228C>G upstream_gene_variant 0.17
rpoC 763145 c.-225G>A upstream_gene_variant 0.17
rpoC 763148 c.-222G>C upstream_gene_variant 0.17
rpoC 763158 c.-212C>T upstream_gene_variant 0.16
rpoC 763166 c.-204A>G upstream_gene_variant 0.14
rpoC 763169 c.-201A>G upstream_gene_variant 0.14
rpoC 763442 p.Tyr25Lys missense_variant 0.17
rpoC 763456 c.87A>G synonymous_variant 0.2
rpoC 763468 c.99G>C synonymous_variant 0.26
rpoC 763480 c.111C>A synonymous_variant 0.25
rpoC 763483 c.114G>C synonymous_variant 0.27
rpoC 763486 c.117T>C synonymous_variant 0.28
rpoC 763507 c.138G>C synonymous_variant 0.25
rpoC 763513 c.144C>T synonymous_variant 0.21
rpoC 763517 p.Lys50Arg missense_variant 0.22
rpoC 763528 c.159G>T synonymous_variant 0.21
rpoC 763531 c.162G>C synonymous_variant 0.25
rpoC 763534 c.165T>C synonymous_variant 0.25
rpoC 763549 c.180C>T synonymous_variant 0.19
rpoC 763550 p.Tyr61Ala missense_variant 0.21
rpoC 763555 c.186C>T synonymous_variant 0.19
rpoC 763561 c.192G>A synonymous_variant 0.2
rpoC 763570 c.201G>C synonymous_variant 0.22
rpoC 763573 c.204G>T synonymous_variant 0.19
rpoC 763578 p.Phe70Tyr missense_variant 0.23
rpoC 763589 p.Ile74Val missense_variant 0.12
rpoC 763594 c.225C>T synonymous_variant 0.13
rpoC 763642 c.273G>C synonymous_variant 0.18
rpoC 763660 c.291T>G synonymous_variant 0.12
rpoC 763708 c.339G>C synonymous_variant 0.12
rpoC 764359 c.990C>G synonymous_variant 0.12
rpoC 764371 c.1002G>C synonymous_variant 0.12
rpoC 764377 c.1008C>G synonymous_variant 0.12
rpoC 764380 c.1011G>C synonymous_variant 0.12
rpoC 764387 c.1018_1020delTTGinsCTC synonymous_variant 0.13
rpoC 764405 c.1036_1038delAGGinsCGC synonymous_variant 0.12
rpoC 764410 c.1041G>C synonymous_variant 0.13
rpoC 764424 p.Asn352Thr missense_variant 0.14
rpoC 764428 c.1059G>A synonymous_variant 0.14
rpoC 764431 c.1062G>C synonymous_variant 0.14
rpoC 764434 c.1065A>G synonymous_variant 0.14
rpoC 764435 c.1066A>C synonymous_variant 0.15
rpoC 764441 p.Ile358Leu missense_variant 0.18
rpoC 764446 p.Asp359Glu missense_variant 0.17
rpoC 764455 c.1086G>C synonymous_variant 0.2
rpoC 764458 c.1089G>C synonymous_variant 0.2
rpoC 764461 c.1092A>G synonymous_variant 0.2
rpoC 764470 c.1101C>G synonymous_variant 0.17
rpoC 764479 c.1110G>A synonymous_variant 0.18
rpoC 764485 c.1116G>C synonymous_variant 0.38
rpoC 764491 c.1122G>T synonymous_variant 0.12
rpoC 764503 c.1134G>T synonymous_variant 0.35
rpoC 764509 c.1140G>C synonymous_variant 0.35
rpoC 764521 c.1152T>C synonymous_variant 0.38
rpoC 764527 c.1158C>T synonymous_variant 0.31
rpoC 764536 c.1167G>C synonymous_variant 0.38
rpoC 764545 c.1176C>A synonymous_variant 0.36
rpoC 764548 c.1179G>C synonymous_variant 0.36
rpoC 764551 c.1182G>T synonymous_variant 0.33
rpoC 764554 c.1185C>T synonymous_variant 0.31
rpoC 764562 p.Pro398Leu missense_variant 0.33
rpoC 764566 c.1197C>G synonymous_variant 0.39
rpoC 764572 c.1203G>C synonymous_variant 0.34
rpoC 764575 c.1206T>G synonymous_variant 0.42
rpoC 764576 c.1207_1208delTCinsAG synonymous_variant 0.34
rpoC 764581 c.1212T>C synonymous_variant 0.44
rpoC 764582 p.Leu405Met missense_variant 0.14
rpoC 764602 c.1233C>T synonymous_variant 0.13
rpoC 764605 c.1236G>C synonymous_variant 0.39
rpoC 764611 c.1242G>T synonymous_variant 0.4
rpoC 764626 c.1257C>T synonymous_variant 0.22
rpoC 764632 c.1263T>C synonymous_variant 0.21
rpoC 764647 c.1278C>T synonymous_variant 0.2
rpoC 764650 c.1281G>T synonymous_variant 0.35
rpoC 764653 c.1284G>C synonymous_variant 0.29
rpoC 764656 c.1287C>G synonymous_variant 0.19
rpoC 764662 c.1293G>C synonymous_variant 0.22
rpoC 764668 c.1299C>T synonymous_variant 0.13
rpoC 764671 c.1302G>C synonymous_variant 0.13
rpoC 764677 c.1308C>G synonymous_variant 0.23
rpoC 764678 p.Lys437Gln missense_variant 0.22
rpoC 764683 c.1314G>C synonymous_variant 0.16
rpoC 764692 c.1323C>T synonymous_variant 0.14
rpoC 764706 p.Leu446Gln missense_variant 0.23
rpoC 764713 c.1344G>C synonymous_variant 0.18
rpoC 764731 c.1362G>C synonymous_variant 0.16
rpoC 764737 c.1368G>C synonymous_variant 0.13
rpoC 764824 c.1455T>C synonymous_variant 0.15
rpoC 764827 c.1458G>C synonymous_variant 0.15
rpoC 764838 p.Val490Ala missense_variant 0.2
rpoC 764843 p.Ala492Ser missense_variant 0.2
rpoC 764846 p.Glu493Gln missense_variant 0.2
rpoC 764854 c.1485G>C synonymous_variant 0.25
rpoC 764858 p.Leu497Met missense_variant 0.34
rpoC 764869 c.1500C>T synonymous_variant 0.38
rpoC 764875 c.1506C>T synonymous_variant 0.38
rpoC 764887 c.1518G>C synonymous_variant 0.38
rpoC 764888 c.1519_1521delTTGinsCTT synonymous_variant 0.38
rpoC 764911 c.1542A>C synonymous_variant 0.41
rpoC 764912 p.Met515Val missense_variant 0.41
rpoC 764917 c.1548G>C synonymous_variant 0.4
rpoC 764920 c.1551G>C synonymous_variant 0.41
rpoC 764926 c.1557C>T synonymous_variant 0.42
rpoC 764929 c.1560G>A synonymous_variant 0.43
rpoC 764935 c.1566T>C synonymous_variant 0.46
rpoC 764947 c.1578G>C synonymous_variant 0.44
rpoC 764948 c.1579T>C synonymous_variant 0.44
rpoC 764952 p.Val528Ala missense_variant 0.44
rpoC 764959 c.1590G>A synonymous_variant 0.44
rpoC 764968 c.1599T>C synonymous_variant 0.45
rpoC 764995 c.1626C>G synonymous_variant 1.0
rpoC 764998 c.1629G>C synonymous_variant 0.32
rpoC 765007 c.1638T>C synonymous_variant 0.23
rpoC 765008 c.1639T>C synonymous_variant 0.2
rpoC 765022 c.1653G>C synonymous_variant 0.17
mmpL5 775639 p.Ile948Val missense_variant 1.0
rpsL 781395 c.-165T>C upstream_gene_variant 1.0
Rv1258c 1406430 p.Val304Ala missense_variant 1.0
embR 1416970 c.378C>T synonymous_variant 1.0
rrs 1471659 n.-187C>T upstream_gene_variant 1.0
rrs 1471923 n.78T>C non_coding_transcript_exon_variant 0.5
rrs 1471925 n.80_81insAAGCTTG non_coding_transcript_exon_variant 0.49
rrs 1471929 n.84C>G non_coding_transcript_exon_variant 0.5
rrs 1471931 n.87_89delAGA non_coding_transcript_exon_variant 0.51
rrs 1471967 n.122G>A non_coding_transcript_exon_variant 0.45
rrs 1471980 n.135G>C non_coding_transcript_exon_variant 0.42
rrs 1471981 n.136C>A non_coding_transcript_exon_variant 0.42
rrs 1472017 n.172C>T non_coding_transcript_exon_variant 0.24
rrs 1472102 n.257G>A non_coding_transcript_exon_variant 0.2
rrs 1472106 n.261G>A non_coding_transcript_exon_variant 0.34
rrs 1472108 n.263C>T non_coding_transcript_exon_variant 0.3
rrs 1472112 n.267C>T non_coding_transcript_exon_variant 0.23
rrs 1472113 n.268T>C non_coding_transcript_exon_variant 0.26
rrs 1472122 n.277G>T non_coding_transcript_exon_variant 0.17
rrs 1472123 n.278A>T non_coding_transcript_exon_variant 0.3
rrs 1472124 n.279C>T non_coding_transcript_exon_variant 0.18
rrs 1472150 n.305T>A non_coding_transcript_exon_variant 0.57
rrs 1472151 n.306C>A non_coding_transcript_exon_variant 0.18
rrs 1472155 n.310C>T non_coding_transcript_exon_variant 0.18
rrs 1472160 n.315C>T non_coding_transcript_exon_variant 0.32
rrs 1472172 n.327T>C non_coding_transcript_exon_variant 0.55
rrs 1472225 n.380C>A non_coding_transcript_exon_variant 0.2
rrs 1472251 n.406G>A non_coding_transcript_exon_variant 0.56
rrs 1472324 n.479G>C non_coding_transcript_exon_variant 0.11
rrs 1472344 n.499C>T non_coding_transcript_exon_variant 0.21
rrs 1472379 n.534T>C non_coding_transcript_exon_variant 0.21
rrs 1472400 n.555C>T non_coding_transcript_exon_variant 0.25
rrs 1472435 n.590T>C non_coding_transcript_exon_variant 0.38
rrs 1472438 n.593T>C non_coding_transcript_exon_variant 0.36
rrs 1472439 n.594C>T non_coding_transcript_exon_variant 0.32
rrs 1472447 n.602C>T non_coding_transcript_exon_variant 0.29
rrs 1472448 n.603T>C non_coding_transcript_exon_variant 0.33
rrs 1472450 n.605A>G non_coding_transcript_exon_variant 0.3
rrs 1472451 n.606C>G non_coding_transcript_exon_variant 0.31
rrs 1472461 n.616G>C non_coding_transcript_exon_variant 0.27
rrs 1472462 n.617T>C non_coding_transcript_exon_variant 0.29
rrs 1472464 n.619A>G non_coding_transcript_exon_variant 0.33
rrs 1472471 n.626G>A non_coding_transcript_exon_variant 0.3
rrs 1472489 n.644A>T non_coding_transcript_exon_variant 0.22
rrs 1472494 n.649A>G non_coding_transcript_exon_variant 0.54
rrs 1472496 n.651T>A non_coding_transcript_exon_variant 0.26
rrs 1472498 n.653C>T non_coding_transcript_exon_variant 0.57
rrs 1472530 n.685G>A non_coding_transcript_exon_variant 0.33
rrs 1472537 n.692C>T non_coding_transcript_exon_variant 0.15
rrs 1472558 n.713G>A non_coding_transcript_exon_variant 0.51
rrs 1472569 n.724G>A non_coding_transcript_exon_variant 0.51
rrs 1472571 n.726G>C non_coding_transcript_exon_variant 0.2
rrs 1472581 n.736A>T non_coding_transcript_exon_variant 0.61
rrs 1472597 n.752G>A non_coding_transcript_exon_variant 0.35
rrs 1472598 n.753A>C non_coding_transcript_exon_variant 0.18
rrs 1472599 n.754G>T non_coding_transcript_exon_variant 0.16
rrs 1472607 n.762G>A non_coding_transcript_exon_variant 0.53
rrs 1472616 n.771G>A non_coding_transcript_exon_variant 0.2
rrs 1472655 n.810G>T non_coding_transcript_exon_variant 0.57
rrs 1472658 n.813G>A non_coding_transcript_exon_variant 0.2
rrs 1472660 n.815T>C non_coding_transcript_exon_variant 0.54
rrs 1472661 n.816A>G non_coding_transcript_exon_variant 0.28
rrs 1472677 n.832C>A non_coding_transcript_exon_variant 0.35
rrs 1472690 n.845C>T non_coding_transcript_exon_variant 0.17
rrs 1472692 n.847T>C non_coding_transcript_exon_variant 0.39
rrs 1472697 n.852T>C non_coding_transcript_exon_variant 0.12
rrs 1472713 n.868T>C non_coding_transcript_exon_variant 0.29
rrs 1472714 n.869A>G non_coding_transcript_exon_variant 0.54
rrs 1472716 n.871C>T non_coding_transcript_exon_variant 0.15
rrs 1472742 n.897C>T non_coding_transcript_exon_variant 0.15
rrs 1472744 n.899A>G non_coding_transcript_exon_variant 0.16
rrs 1472755 n.910G>A non_coding_transcript_exon_variant 0.2
rrs 1472790 n.945T>C non_coding_transcript_exon_variant 0.14
rrs 1472828 n.983T>C non_coding_transcript_exon_variant 0.26
rrs 1472836 n.991G>A non_coding_transcript_exon_variant 0.2
rrs 1472837 n.992C>T non_coding_transcript_exon_variant 0.2
rrs 1472843 n.998_999insT non_coding_transcript_exon_variant 0.17
rrs 1472846 n.1002delG non_coding_transcript_exon_variant 0.17
rrs 1472849 n.1004C>G non_coding_transcript_exon_variant 0.16
rrs 1472850 n.1005T>C non_coding_transcript_exon_variant 0.16
rrs 1472855 n.1011_1012insGT non_coding_transcript_exon_variant 0.18
rrs 1472873 n.1028C>T non_coding_transcript_exon_variant 0.24
rrs 1472878 n.1033G>A non_coding_transcript_exon_variant 0.28
rrs 1472880 n.1035G>A non_coding_transcript_exon_variant 0.28
rrs 1472895 n.1050C>T non_coding_transcript_exon_variant 0.6
rrs 1472952 n.1107T>C non_coding_transcript_exon_variant 0.33
rrs 1472955 n.1110C>T non_coding_transcript_exon_variant 0.34
rrs 1472956 n.1111T>C non_coding_transcript_exon_variant 0.44
rrs 1472957 n.1112C>T non_coding_transcript_exon_variant 0.66
rrs 1472971 n.1126G>A non_coding_transcript_exon_variant 0.18
rrs 1472972 n.1127T>C non_coding_transcript_exon_variant 0.17
rrs 1472973 n.1128A>T non_coding_transcript_exon_variant 0.67
rrs 1472987 n.1142G>A non_coding_transcript_exon_variant 0.62
rrs 1472989 n.1144G>A non_coding_transcript_exon_variant 0.37
rrs 1472990 n.1145A>G non_coding_transcript_exon_variant 0.52
rrs 1473005 n.1160C>T non_coding_transcript_exon_variant 0.34
rrs 1473035 n.1190G>A non_coding_transcript_exon_variant 0.84
rrs 1473055 n.1210C>T non_coding_transcript_exon_variant 0.59
rrs 1473056 n.1211A>T non_coding_transcript_exon_variant 0.61
rrs 1473066 n.1221A>G non_coding_transcript_exon_variant 0.58
rrs 1473080 n.1235C>T non_coding_transcript_exon_variant 0.27
rrs 1473088 n.1243A>G non_coding_transcript_exon_variant 0.63
rrs 1473089 n.1244A>C non_coding_transcript_exon_variant 0.12
rrs 1473091 n.1246G>C non_coding_transcript_exon_variant 0.12
rrs 1473093 n.1248C>T non_coding_transcript_exon_variant 0.62
rrs 1473099 n.1254T>G non_coding_transcript_exon_variant 0.15
rrs 1473100 n.1255G>A non_coding_transcript_exon_variant 0.72
rrs 1473102 n.1257C>T non_coding_transcript_exon_variant 0.69
rrs 1473104 n.1259C>T non_coding_transcript_exon_variant 0.75
rrs 1473109 n.1264T>G non_coding_transcript_exon_variant 0.16
rrs 1473110 n.1265T>G non_coding_transcript_exon_variant 0.59
rrs 1473111 n.1266A>G non_coding_transcript_exon_variant 0.77
rrs 1473115 n.1270G>T non_coding_transcript_exon_variant 0.5
rrs 1473120 n.1275C>G non_coding_transcript_exon_variant 0.12
rrs 1473121 n.1276T>C non_coding_transcript_exon_variant 0.76
rrs 1473123 n.1278A>G non_coding_transcript_exon_variant 0.17
rrs 1473132 n.1287T>C non_coding_transcript_exon_variant 0.14
rrs 1473145 n.1300C>T non_coding_transcript_exon_variant 0.79
rrs 1473166 n.1321G>A non_coding_transcript_exon_variant 0.79
rrs 1473252 n.1407T>C non_coding_transcript_exon_variant 0.83
rrs 1473259 n.1414C>T non_coding_transcript_exon_variant 0.83
rrs 1473270 n.1425G>A non_coding_transcript_exon_variant 0.53
rrs 1473276 n.1431A>G non_coding_transcript_exon_variant 0.66
rrs 1473291 n.1446G>T non_coding_transcript_exon_variant 0.54
rrs 1473301 n.1456T>C non_coding_transcript_exon_variant 0.64
rrs 1473305 n.1460G>T non_coding_transcript_exon_variant 0.56
rrs 1473316 n.1471C>T non_coding_transcript_exon_variant 0.66
rrl 1473676 n.19G>A non_coding_transcript_exon_variant 0.14
rrl 1473679 n.22T>C non_coding_transcript_exon_variant 0.17
rrl 1473697 n.40C>T non_coding_transcript_exon_variant 0.14
rrl 1473721 n.64G>A non_coding_transcript_exon_variant 0.13
rrl 1473722 n.65G>T non_coding_transcript_exon_variant 0.13
rrl 1473731 n.74T>A non_coding_transcript_exon_variant 0.14
rrl 1474130 n.473C>T non_coding_transcript_exon_variant 0.21
rrl 1474140 n.483C>T non_coding_transcript_exon_variant 0.3
rrl 1474151 n.494C>T non_coding_transcript_exon_variant 0.34
rrl 1474164 n.507C>T non_coding_transcript_exon_variant 0.13
rrl 1474171 n.514C>T non_coding_transcript_exon_variant 0.15
rrl 1474174 n.517A>G non_coding_transcript_exon_variant 0.21
rrl 1474186 n.529A>T non_coding_transcript_exon_variant 0.2
rrl 1474197 n.540C>T non_coding_transcript_exon_variant 0.26
rrl 1474199 n.542G>A non_coding_transcript_exon_variant 0.19
rrl 1474202 n.545T>G non_coding_transcript_exon_variant 0.28
rrl 1474249 n.592G>T non_coding_transcript_exon_variant 0.62
rrl 1474269 n.612C>T non_coding_transcript_exon_variant 0.47
rrl 1474275 n.618T>G non_coding_transcript_exon_variant 0.28
rrl 1474280 n.623C>T non_coding_transcript_exon_variant 0.18
rrl 1474281 n.624A>G non_coding_transcript_exon_variant 0.17
rrl 1474310 n.653T>G non_coding_transcript_exon_variant 0.22
rrl 1474311 n.656_657dupTG non_coding_transcript_exon_variant 0.14
rrl 1474316 n.659T>C non_coding_transcript_exon_variant 0.14
rrl 1474317 n.660G>A non_coding_transcript_exon_variant 0.15
rrl 1474348 n.691C>T non_coding_transcript_exon_variant 0.21
rrl 1474351 n.694G>T non_coding_transcript_exon_variant 0.27
rrl 1474353 n.696A>G non_coding_transcript_exon_variant 0.24
rrl 1474354 n.697C>T non_coding_transcript_exon_variant 0.21
rrl 1474362 n.705A>G non_coding_transcript_exon_variant 0.45
rrl 1474371 n.714C>A non_coding_transcript_exon_variant 0.14
rrl 1474378 n.721G>T non_coding_transcript_exon_variant 0.12
rrl 1474383 n.726G>T non_coding_transcript_exon_variant 0.26
rrl 1474387 n.730C>T non_coding_transcript_exon_variant 0.29
rrl 1474447 n.790G>A non_coding_transcript_exon_variant 0.12
rrl 1474451 n.794T>C non_coding_transcript_exon_variant 0.25
rrl 1474466 n.809G>A non_coding_transcript_exon_variant 0.21
rrl 1474467 n.810A>G non_coding_transcript_exon_variant 0.13
rrl 1474476 n.819C>T non_coding_transcript_exon_variant 0.34
rrl 1474487 n.830G>T non_coding_transcript_exon_variant 0.15
rrl 1474488 n.831G>T non_coding_transcript_exon_variant 0.54
rrl 1474495 n.838G>A non_coding_transcript_exon_variant 0.29
rrl 1474496 n.839C>A non_coding_transcript_exon_variant 0.56
rrl 1474497 n.840G>C non_coding_transcript_exon_variant 0.61
rrl 1474498 n.841G>T non_coding_transcript_exon_variant 0.23
rrl 1474505 n.848C>G non_coding_transcript_exon_variant 0.23
rrl 1474506 n.849C>G non_coding_transcript_exon_variant 0.61
rrl 1474507 n.850G>T non_coding_transcript_exon_variant 0.6
rrl 1474508 n.851C>T non_coding_transcript_exon_variant 0.29
rrl 1474516 n.859C>A non_coding_transcript_exon_variant 0.59
rrl 1474517 n.860C>G non_coding_transcript_exon_variant 0.18
rrl 1474529 n.872A>C non_coding_transcript_exon_variant 0.48
rrl 1474530 n.873G>A non_coding_transcript_exon_variant 0.45
rrl 1474537 n.880G>A non_coding_transcript_exon_variant 0.75
rrl 1474539 n.882C>T non_coding_transcript_exon_variant 0.45
rrl 1474540 n.883T>G non_coding_transcript_exon_variant 0.48
rrl 1474552 n.895C>T non_coding_transcript_exon_variant 0.16
rrl 1474558 n.901G>A non_coding_transcript_exon_variant 0.5
rrl 1474583 n.926C>T non_coding_transcript_exon_variant 0.13
rrl 1474584 n.927C>T non_coding_transcript_exon_variant 0.52
rrl 1474626 n.969T>C non_coding_transcript_exon_variant 0.23
rrl 1474627 n.970G>A non_coding_transcript_exon_variant 0.44
rrl 1474632 n.975G>T non_coding_transcript_exon_variant 0.48
rrl 1474634 n.977T>C non_coding_transcript_exon_variant 0.17
rrl 1474636 n.979A>T non_coding_transcript_exon_variant 0.55
rrl 1474637 n.980C>T non_coding_transcript_exon_variant 0.64
rrl 1474638 n.981C>G non_coding_transcript_exon_variant 0.64
rrl 1474639 n.982G>C non_coding_transcript_exon_variant 0.44
rrl 1474640 n.983C>T non_coding_transcript_exon_variant 0.19
rrl 1474672 n.1015C>T non_coding_transcript_exon_variant 0.29
rrl 1474677 n.1020A>G non_coding_transcript_exon_variant 0.61
rrl 1474694 n.1037C>T non_coding_transcript_exon_variant 0.38
rrl 1474722 n.1065T>C non_coding_transcript_exon_variant 0.15
rrl 1474723 n.1066G>A non_coding_transcript_exon_variant 0.34
rrl 1474734 n.1077G>A non_coding_transcript_exon_variant 0.53
rrl 1474734 n.1077G>T non_coding_transcript_exon_variant 0.57
rrl 1474736 n.1079C>T non_coding_transcript_exon_variant 0.32
rrl 1474749 n.1092C>T non_coding_transcript_exon_variant 0.68
rrl 1474751 n.1094G>A non_coding_transcript_exon_variant 0.26
rrl 1474753 n.1097delC non_coding_transcript_exon_variant 0.6
rrl 1474760 n.1103A>G non_coding_transcript_exon_variant 0.72
rrl 1474777 n.1120T>C non_coding_transcript_exon_variant 0.38
rrl 1474779 n.1122G>A non_coding_transcript_exon_variant 0.54
rrl 1474780 n.1123C>T non_coding_transcript_exon_variant 0.18
rrl 1474782 n.1125G>A non_coding_transcript_exon_variant 0.53
rrl 1474783 n.1126G>A non_coding_transcript_exon_variant 0.34
rrl 1474794 n.1137C>T non_coding_transcript_exon_variant 0.8
rrl 1474801 n.1144G>A non_coding_transcript_exon_variant 0.14
rrl 1474802 n.1145T>C non_coding_transcript_exon_variant 0.15
rrl 1474803 n.1146G>A non_coding_transcript_exon_variant 0.24
rrl 1474812 n.1155G>A non_coding_transcript_exon_variant 0.26
rrl 1474823 n.1166C>G non_coding_transcript_exon_variant 0.79
rrl 1474824 n.1167A>G non_coding_transcript_exon_variant 0.31
rrl 1474825 n.1168G>A non_coding_transcript_exon_variant 0.25
rrl 1474827 n.1170C>T non_coding_transcript_exon_variant 0.39
rrl 1474830 n.1173A>G non_coding_transcript_exon_variant 0.66
rrl 1474830 n.1173A>T non_coding_transcript_exon_variant 0.62
rrl 1474831 n.1174A>T non_coding_transcript_exon_variant 0.45
rrl 1474832 n.1175A>T non_coding_transcript_exon_variant 0.16
rrl 1474864 n.1207C>T non_coding_transcript_exon_variant 0.76
rrl 1474883 n.1226T>C non_coding_transcript_exon_variant 0.35
rrl 1474896 n.1239A>G non_coding_transcript_exon_variant 0.25
rrl 1474901 n.1244A>G non_coding_transcript_exon_variant 0.3
rrl 1474904 n.1247G>C non_coding_transcript_exon_variant 0.74
rrl 1474913 n.1256T>C non_coding_transcript_exon_variant 0.33
rrl 1474921 n.1264C>T non_coding_transcript_exon_variant 0.2
rrl 1474932 n.1275C>T non_coding_transcript_exon_variant 0.47
rrl 1475515 n.1858G>A non_coding_transcript_exon_variant 0.21
rrl 1475526 n.1869C>A non_coding_transcript_exon_variant 0.22
rrl 1475531 n.1874C>T non_coding_transcript_exon_variant 0.22
rrl 1475538 n.1881T>A non_coding_transcript_exon_variant 0.23
rrl 1475539 n.1882A>T non_coding_transcript_exon_variant 0.23
rrl 1475545 n.1888T>G non_coding_transcript_exon_variant 0.22
rrl 1475548 n.1891C>T non_coding_transcript_exon_variant 0.21
rrl 1475549 n.1892T>C non_coding_transcript_exon_variant 0.21
rrl 1475672 n.2015C>T non_coding_transcript_exon_variant 0.22
rrl 1475673 n.2016T>C non_coding_transcript_exon_variant 0.24
rrl 1475699 n.2042C>T non_coding_transcript_exon_variant 0.58
rrl 1475713 n.2056C>T non_coding_transcript_exon_variant 0.13
rrl 1475722 n.2065G>T non_coding_transcript_exon_variant 0.53
rrl 1475751 n.2094C>T non_coding_transcript_exon_variant 0.56
rrl 1475752 n.2095C>T non_coding_transcript_exon_variant 0.47
rrl 1475753 n.2096C>G non_coding_transcript_exon_variant 0.58
rrl 1475769 n.2112T>C non_coding_transcript_exon_variant 0.4
rrl 1475775 n.2118G>T non_coding_transcript_exon_variant 0.49
rrl 1475777 n.2120A>T non_coding_transcript_exon_variant 0.19
rrl 1475869 n.2212C>A non_coding_transcript_exon_variant 0.48
rrl 1475881 n.2224T>C non_coding_transcript_exon_variant 0.66
rrl 1475883 n.2226A>C non_coding_transcript_exon_variant 0.52
rrl 1475883 n.2226A>T non_coding_transcript_exon_variant 0.79
rrl 1475884 n.2227A>G non_coding_transcript_exon_variant 0.35
rrl 1475896 n.2239A>G non_coding_transcript_exon_variant 0.17
rrl 1475897 n.2240T>C non_coding_transcript_exon_variant 0.29
rrl 1475898 n.2241A>G non_coding_transcript_exon_variant 0.67
rrl 1475899 n.2242G>A non_coding_transcript_exon_variant 0.66
rrl 1475900 n.2243A>G non_coding_transcript_exon_variant 0.21
rrl 1475902 n.2245T>C non_coding_transcript_exon_variant 0.21
rrl 1475906 n.2249C>T non_coding_transcript_exon_variant 0.18
rrl 1475916 n.2259C>G non_coding_transcript_exon_variant 0.89
rrl 1475937 n.2280A>T non_coding_transcript_exon_variant 0.64
rrl 1475943 n.2286G>A non_coding_transcript_exon_variant 0.64
rrl 1475945 n.2288C>A non_coding_transcript_exon_variant 0.16
rrl 1475952 n.2295A>G non_coding_transcript_exon_variant 0.65
rrl 1475963 n.2306G>T non_coding_transcript_exon_variant 0.45
rrl 1475970 n.2313C>T non_coding_transcript_exon_variant 0.62
rrl 1475975 n.2318C>T non_coding_transcript_exon_variant 0.82
rrl 1475977 n.2320A>G non_coding_transcript_exon_variant 0.81
rrl 1475978 n.2321C>T non_coding_transcript_exon_variant 0.43
rrl 1475988 n.2331A>G non_coding_transcript_exon_variant 0.51
rrl 1475990 n.2333G>A non_coding_transcript_exon_variant 0.27
rrl 1475993 n.2336C>T non_coding_transcript_exon_variant 0.41
rrl 1475997 n.2340A>T non_coding_transcript_exon_variant 0.74
rrl 1475998 n.2341C>T non_coding_transcript_exon_variant 0.42
rrl 1476001 n.2344T>C non_coding_transcript_exon_variant 0.47
rrl 1476028 n.2372_2375delAACC non_coding_transcript_exon_variant 0.39
rrl 1476034 n.2377_2378insACAT non_coding_transcript_exon_variant 0.39
rrl 1476040 n.2383C>T non_coding_transcript_exon_variant 0.17
rrl 1476045 n.2388G>T non_coding_transcript_exon_variant 0.17
rrl 1476046 n.2389G>T non_coding_transcript_exon_variant 0.38
rrl 1476047 n.2390G>T non_coding_transcript_exon_variant 0.17
rrl 1476048 n.2391G>T non_coding_transcript_exon_variant 0.33
rrl 1476049 n.2392C>G non_coding_transcript_exon_variant 0.4
rrl 1476076 n.2419A>G non_coding_transcript_exon_variant 0.38
rrl 1476086 n.2429G>A non_coding_transcript_exon_variant 0.3
rrl 1476087 n.2430C>T non_coding_transcript_exon_variant 0.31
rrl 1476091 n.2434_2435insG non_coding_transcript_exon_variant 0.32
rrl 1476099 n.2442A>G non_coding_transcript_exon_variant 0.3
rrl 1476100 n.2443A>C non_coding_transcript_exon_variant 0.3
rrl 1476103 n.2446C>A non_coding_transcript_exon_variant 0.29
rrl 1476105 n.2450delA non_coding_transcript_exon_variant 0.28
rrl 1476110 n.2453G>T non_coding_transcript_exon_variant 0.37
rrl 1476113 n.2456T>G non_coding_transcript_exon_variant 0.26
rrl 1476115 n.2458T>C non_coding_transcript_exon_variant 0.21
rrl 1476130 n.2473G>A non_coding_transcript_exon_variant 0.32
rrl 1476131 n.2474C>T non_coding_transcript_exon_variant 0.65
rrl 1476164 n.2507A>G non_coding_transcript_exon_variant 0.63
rrl 1476165 n.2508T>A non_coding_transcript_exon_variant 0.31
rrl 1476188 n.2531C>T non_coding_transcript_exon_variant 0.31
rrl 1476194 n.2537A>G non_coding_transcript_exon_variant 0.77
rrl 1476200 n.2543A>T non_coding_transcript_exon_variant 0.77
rrl 1476201 n.2544C>T non_coding_transcript_exon_variant 0.77
rrl 1476214 n.2557G>T non_coding_transcript_exon_variant 0.41
rrl 1476215 n.2558C>T non_coding_transcript_exon_variant 0.73
rrl 1476224 n.2567A>G non_coding_transcript_exon_variant 0.73
rrl 1476245 n.2588C>T non_coding_transcript_exon_variant 0.64
rrl 1476250 n.2593C>G non_coding_transcript_exon_variant 0.16
rrl 1476251 n.2594T>C non_coding_transcript_exon_variant 0.16
rrl 1476252 n.2595T>G non_coding_transcript_exon_variant 0.63
rrl 1476253 n.2596A>G non_coding_transcript_exon_variant 0.31
rrl 1476256 n.2599A>G non_coding_transcript_exon_variant 0.6
rrl 1476257 n.2600G>C non_coding_transcript_exon_variant 0.17
rrl 1476260 n.2603A>G non_coding_transcript_exon_variant 0.8
rrl 1476267 n.2610G>T non_coding_transcript_exon_variant 0.31
rrl 1476276 n.2619C>A non_coding_transcript_exon_variant 0.28
rrl 1476280 n.2623A>C non_coding_transcript_exon_variant 0.2
rrl 1476281 n.2624T>C non_coding_transcript_exon_variant 0.56
rrl 1476293 n.2636C>T non_coding_transcript_exon_variant 0.16
rrl 1476294 n.2637A>G non_coding_transcript_exon_variant 0.4
rrl 1476295 n.2638C>G non_coding_transcript_exon_variant 0.42
rrl 1476296 n.2639C>T non_coding_transcript_exon_variant 0.66
rrl 1476297 n.2640C>G non_coding_transcript_exon_variant 0.41
rrl 1476298 n.2641C>G non_coding_transcript_exon_variant 0.25
rrl 1476299 n.2642C>G non_coding_transcript_exon_variant 0.21
rrl 1476300 n.2643G>T non_coding_transcript_exon_variant 0.46
rrl 1476301 n.2644A>T non_coding_transcript_exon_variant 0.63
rrl 1476302 n.2645G>A non_coding_transcript_exon_variant 0.16
rrl 1476308 n.2651G>C non_coding_transcript_exon_variant 0.22
rrl 1476309 n.2652G>C non_coding_transcript_exon_variant 0.27
rrl 1476311 n.2654G>C non_coding_transcript_exon_variant 0.45
rrl 1476312 n.2655T>C non_coding_transcript_exon_variant 0.41
rrl 1476313 n.2656G>A non_coding_transcript_exon_variant 0.2
rrl 1476332 n.2675G>C non_coding_transcript_exon_variant 0.25
rrl 1476337 n.2680C>T non_coding_transcript_exon_variant 0.25
rrl 1476338 n.2681C>T non_coding_transcript_exon_variant 0.21
rrl 1476353 n.2696G>T non_coding_transcript_exon_variant 0.29
rrl 1476358 n.2701T>C non_coding_transcript_exon_variant 0.32
rrl 1476359 n.2702C>G non_coding_transcript_exon_variant 0.36
rrl 1476369 n.2712C>T non_coding_transcript_exon_variant 0.32
rrl 1476372 n.2715T>C non_coding_transcript_exon_variant 0.34
rrl 1476381 n.2724G>C non_coding_transcript_exon_variant 0.4
rrl 1476382 n.2725A>G non_coding_transcript_exon_variant 0.32
rrl 1476383 n.2726T>A non_coding_transcript_exon_variant 0.32
rrl 1476425 n.2768G>T non_coding_transcript_exon_variant 0.17
rrl 1476428 n.2771C>T non_coding_transcript_exon_variant 0.87
rrl 1476429 n.2772A>C non_coding_transcript_exon_variant 0.56
rrl 1476466 n.2809C>T non_coding_transcript_exon_variant 0.52
rrl 1476481 n.2824T>C non_coding_transcript_exon_variant 0.66
rrl 1476506 n.2849T>C non_coding_transcript_exon_variant 0.56
rrl 1476515 n.2858C>T non_coding_transcript_exon_variant 0.4
rrl 1476530 n.2873C>T non_coding_transcript_exon_variant 0.44
rrl 1476536 n.2879G>A non_coding_transcript_exon_variant 0.69
rrl 1476538 n.2881A>G non_coding_transcript_exon_variant 0.15
rrl 1476539 n.2882A>G non_coding_transcript_exon_variant 0.63
rrl 1476540 n.2883C>G non_coding_transcript_exon_variant 0.7
rrl 1476547 n.2890C>T non_coding_transcript_exon_variant 0.36
rrl 1476567 n.2910C>T non_coding_transcript_exon_variant 0.19
rrl 1476573 n.2916A>T non_coding_transcript_exon_variant 0.24
rrl 1476580 n.2923G>A non_coding_transcript_exon_variant 0.17
rrl 1476584 n.2927C>T non_coding_transcript_exon_variant 0.32
rrl 1476585 n.2928A>G non_coding_transcript_exon_variant 0.27
rrl 1476595 n.2938C>A non_coding_transcript_exon_variant 0.16
rrl 1476600 n.2943A>C non_coding_transcript_exon_variant 0.12
rrl 1476607 n.2950C>T non_coding_transcript_exon_variant 0.15
rrl 1476608 n.2951C>G non_coding_transcript_exon_variant 0.15
rrl 1476616 n.2959A>G non_coding_transcript_exon_variant 0.13
rrl 1476630 n.2973A>G non_coding_transcript_exon_variant 0.13
rpsA 1833838 c.297G>C synonymous_variant 0.12
rpsA 1833847 c.306C>G synonymous_variant 0.14
rpsA 1833856 c.315A>G synonymous_variant 0.15
rpsA 1833862 c.321G>A synonymous_variant 0.18
rpsA 1833874 c.333T>C synonymous_variant 0.11
rpsA 1833877 c.336C>A synonymous_variant 0.19
rpsA 1833884 p.Thr115Ala missense_variant 0.2
rpsA 1833894 p.Ala118Glu missense_variant 0.2
rpsA 1833914 p.Ala125Pro missense_variant 0.2
rpsA 1833919 c.378C>T synonymous_variant 0.19
rpsA 1833921 p.Lys127Thr missense_variant 0.19
rpsA 1833925 c.384C>T synonymous_variant 0.18
rpsA 1833928 c.387G>C synonymous_variant 0.2
rpsA 1833949 c.408T>C synonymous_variant 0.29
rpsA 1833955 c.414G>C synonymous_variant 0.11
rpsA 1833961 c.420C>G synonymous_variant 0.16
rpsA 1833970 c.429G>C synonymous_variant 0.18
rpsA 1833976 c.435C>T synonymous_variant 0.15
rpsA 1833979 c.438T>C synonymous_variant 0.29
rpsA 1833994 c.453G>C synonymous_variant 0.27
rpsA 1833997 c.456G>C synonymous_variant 0.22
rpsA 1834000 c.459G>C synonymous_variant 0.17
rpsA 1834009 c.468C>T synonymous_variant 0.16
rpsA 1834012 c.471G>C synonymous_variant 0.21
rpsA 1834015 c.474G>C synonymous_variant 0.22
rpsA 1834024 c.483G>C synonymous_variant 0.24
rpsA 1834025 p.Gln162Ala missense_variant 0.23
rpsA 1834040 p.Lys167Arg missense_variant 0.25
rpsA 1834046 p.Ile169Leu missense_variant 0.14
rpsA 1834051 c.510G>A synonymous_variant 0.21
rpsA 1834054 c.513C>G synonymous_variant 0.15
rpsA 1834240 c.699T>C synonymous_variant 0.11
rpsA 1834249 c.708T>C synonymous_variant 0.17
rpsA 1834261 c.720A>G synonymous_variant 0.17
rpsA 1834264 c.723G>C synonymous_variant 0.15
rpsA 1834294 c.753G>C synonymous_variant 0.13
rpsA 1834298 p.Gln253Glu missense_variant 0.17
rpsA 1834307 p.Asp256Gln missense_variant 0.16
rpsA 1834312 c.771G>A synonymous_variant 0.14
rpsA 1834489 c.948T>C synonymous_variant 0.15
rpsA 1834522 c.981C>T synonymous_variant 0.26
rpsA 1834528 c.987T>C synonymous_variant 0.25
rpsA 1834540 c.999G>T synonymous_variant 0.23
rpsA 1834543 c.1002C>G synonymous_variant 0.22
rpsA 1834546 c.1005T>C synonymous_variant 0.26
rpsA 1834552 c.1011G>C synonymous_variant 0.2
rpsA 1834555 c.1014T>C synonymous_variant 0.21
rpsA 1834561 c.1020C>T synonymous_variant 0.22
rpsA 1834567 p.Asp342Glu missense_variant 0.21
rpsA 1834570 p.Asp343Glu missense_variant 0.27
rpsA 1834572 p.Ala344Val missense_variant 0.28
rpsA 1834600 c.1059G>C synonymous_variant 0.23
rpsA 1834606 c.1065C>T synonymous_variant 0.23
rpsA 1834612 c.1071G>C synonymous_variant 0.27
rpsA 1834618 c.1077G>C synonymous_variant 0.28
rpsA 1834619 c.1078T>C synonymous_variant 0.26
rpsA 1834624 c.1083G>C synonymous_variant 0.21
rpsA 1834633 c.1092A>G synonymous_variant 0.21
rpsA 1834636 c.1095C>T synonymous_variant 0.19
rpsA 1834637 p.Asn366Asp missense_variant 0.19
rpsA 1834654 c.1113G>A synonymous_variant 0.21
rpsA 1834663 c.1122C>T synonymous_variant 0.2
rpsA 1834669 c.1128G>C synonymous_variant 0.11
rpsA 1834689 p.Ser383Thr missense_variant 0.11
tlyA 1917972 c.33A>G synonymous_variant 1.0
Rv1979c 2223293 c.-129A>G upstream_gene_variant 1.0
thyA 3073868 p.Thr202Ala missense_variant 1.0
ald 3086788 c.-32T>C upstream_gene_variant 1.0
fprA 3473996 c.-11_-10insA upstream_gene_variant 1.0
Rv3236c 3612009 p.Ala370Thr missense_variant 1.0
alr 3840719 c.702A>G synonymous_variant 1.0
clpC1 4038287 c.2418C>T synonymous_variant 1.0
clpC1 4040021 c.684A>C synonymous_variant 0.12
clpC1 4040024 c.681A>G synonymous_variant 0.12
embA 4242643 c.-590C>T upstream_gene_variant 1.0
whiB6 4338595 c.-75delG upstream_gene_variant 1.0
gid 4408156 p.Leu16Arg missense_variant 1.0