EBG00000313325 - n.1257C>T
Drug resistance types
91 Sensitive
61 RR-TB
29 HR-TB
77 MDR-TB
35 Pre-XDR-TB
1 XDR-TB
447 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.2.2.2 | 9 |
| lineage2.2.1 | 111 |
| lineage4.1.2.1 | 57 |
| lineage1.1.2 | 10 |
| lineage3;lineage4.9 | 3 |
| lineage3 | 63 |
| lineage4.8 | 87 |
| lineage2.2.1.1 | 8 |
| lineage4.6.2.2 | 6 |
| lineage4.9 | 53 |
| lineage4.1.1.1 | 33 |
| lineage4.3.3 | 32 |
| lineage2.2;lineage4 | 1 |
| lineage4.3.4.1 | 6 |
| lineage1.1.1 | 1 |
| lineage5 | 2 |
| lineage3.1.3 | 4 |
| lineage4.3.4.2 | 9 |
| lineage2.2.2 | 8 |
| lineage4.1.2 | 10 |
| lineage4 | 5 |
| lineage4.3.2.1 | 4 |
| lineage3.1.2 | 2 |
| lineage1.2.2 | 2 |
| lineage4.4.1.1 | 17 |
| lineage4.3.4.1;lineage4.9 | 2 |
| lineage1.2.1.2.1 | 4 |
| lineage3.1.1 | 12 |
| lineage1.1.3.1 | 8 |
| lineage4.3.2 | 6 |
| lineage1.2.1.2 | 1 |
| lineage4.1.1.3.1 | 3 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage1.1.3.3 | 1 |
| lineage4.6.5 | 2 |
| La1.8.1 | 4 |
| lineage4.3.4.2;lineage4.9 | 1 |
| lineage4.1.1.3 | 12 |
| lineage4.2.2 | 3 |
| lineage3.1.2.1 | 8 |
| lineage4.9.1 | 1 |
| lineage4.7 | 11 |
| La1.4 | 1 |
| lineage4.2.1 | 12 |
| lineage1.2.2.2 | 8 |
| La1.7;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 5 |
| lineage6.1.2 | 3 |
| lineage4.4 | 2 |
| lineage4.3.1.1 | 2 |
| lineage4.1.3 | 4 |
| lineage6.1.3 | 2 |
| lineage2.2.1;lineage4.2.1 | 1 |
| lineage3.1.2;lineage4.1.1.3.1 | 1 |
| lineage4.3 | 2 |
| lineage4.1.4 | 2 |
| lineage4.1.1.2 | 2 |
| lineage4.4.1.1.1 | 4 |
| lineage4.4.1.2 | 2 |
| La1.3 | 2 |
| lineage3;lineage4 | 2 |
| lineage1.1.3 | 2 |
| 3 | |
| lineage4.1;lineage4.9 | 1 |
| lineage4.8.1 | 6 |
| lineage4.1.2.1;lineage4.9 | 2 |
| lineage4.2.1.1 | 3 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage3.1.3;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La2 | 1 |
| lineage5.1.3 | 1 |
| lineage4.1 | 2 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage4.5 | 3 |
| lineage3.1.1;lineage4.9 | 1 |
| lineage4.6 | 2 |
| La1.3;lineage1.2.2.2 | 1 |
| lineage5.1.1 | 1 |
| lineage2.1 | 1 |
| lineage6.2.3 | 2 |
| lineage4.8.2 | 1 |
| lineage1.2.1.1 | 2 |
| lineage2.2.1;lineage4 | 1 |
| lineage1.1.1.1 | 1 |
| lineage3.1.2.2 | 3 |
| lineage2.2.1;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage4.4.2 | 3 |
| La3 | 1 |
| La1.8.2 | 1 |
| lineage4.2.2.1 | 1 |
| lineage3.1 | 1 |
| lineage3;lineage4.2.2.2 | 1 |
| lineage3.1.1;lineage4 | 1 |
| lineage2.2.1;lineage4.8 | 1 |
| lineage4.6.1.2 | 1 |
| lineage2.2.1;lineage2.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 741 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR1665404 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821372 | Other | lineage4.1.2.1 | None | ERR2513681 | Other | lineage1.1.2 | None | ERR4820967 | Other | lineage3;lineage4.9 | None | ERR4820266 | Sensitive | lineage3 | None | ERR4815923 | Sensitive | lineage4.8 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR867526 | MDR-TB | lineage2.2.1 | None | ERR867538 | Other | lineage4.2.2.2 | None | SRR18003038 | Other | lineage2.2.1 | None | ERR983238 | MDR-TB | lineage2.2.1.1 | None | ERR4818050 | Sensitive | lineage4.6.2.2 | None | SRR5818435 | Sensitive | lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | SRR7069946 | Other | lineage4.8 | None | SRR11349194 | MDR-TB | lineage4.3.3 | None | ERR2512986 | Other | lineage3 | None | SRR11972369 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | ERR10796618 | Other | lineage4.3.4.1 | None | SRR7131196 | Other | lineage4.8 | None | SRR21658550 | Other | lineage1.1.1 | None | ERR4821310 | Other | lineage5 | None | SRR6045613 | Other | lineage3.1.3 | None | ERR4817434 | Other | lineage3 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | SRR7070535 | HR-TB | lineage4.1.2.1 | None | SRR7131230 | HR-TB | lineage4.3.4.2 | None | ERR4815901 | Other | lineage2.2.2 | None | ERR4816531 | Other | lineage4.1.2 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | SRR18002937 | Other | lineage2.2.1 | None | ERR2027263 | Other | lineage4 | None | ERR10796623 | Other | lineage4.1.1.1 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR10315696 | Sensitive | lineage4.3.2.1 | None | ERR978748 | Other | lineage4.8 | None | ERR4819636 | Other | lineage3.1.2 | None | SRR7069082 | Other | lineage4.1.2.1 | None | SRR18003044 | MDR-TB | lineage2.2.1 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR4818126 | Other | lineage1.2.2 | None | SRR15276982 | XDR-TB | lineage3 | None | ERR4819533 | Other | lineage1.1.2 | None | SRR19303818 | Other | lineage4.3.4.2 | None | SRR10315486 | MDR-TB | lineage2.2.1 | None | SRR3675461 | RR-TB | lineage4.9 | None | SRR3675389 | Other | lineage4.9 | None | ERR2513589 | Other | lineage3.1.3 | None | ERR4821704 | Other | lineage4.3.3 | None | ERR4817555 | Sensitive | lineage3 | None | ERR4817645 | Other | lineage4.8 | None | ERR13292031 | Sensitive | lineage4.1.1.1 | None | ERR4819192 | Other | lineage3 | None | SRR6982141 | Other | lineage4.3.3 | None | ERR4821769 | Other | lineage4.1.2.1 | None | SRR6896206 | Sensitive | lineage2.2.1 | None | ERR4818570 | Other | lineage4.3.3 | None | ERR4814700 | Other | lineage4.3.3 | None | ERR4815572 | Other | lineage4.1.2.1 | None | ERR4818810 | Other | lineage2.2.1 | None | ERR4819096 | Other | lineage4.4.1.1 | None | ERR4816667 | Other | lineage2.2.2 | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | ERR4816425 | Other | lineage2.2.2 | None | SRR11342689 | Other | lineage4.1.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR11342688 | Other | lineage4.2.2.2 | None | SRR6044958 | Other | lineage4.4.1.1 | None | ERR2514181 | Other | lineage1.2.1.2.1 | None | ERR867572 | Other | lineage4.9 | None | SAMEA3450033 | Other | lineage4.8 | None | SRR18003027 | Other | lineage2.2.1 | None | SRR6045238 | Sensitive | lineage4.1.1.1 | gb | ERR2514645 | Sensitive | lineage4.3.4.1 | None | SRR5818690 | Other | lineage4.2.2.2 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | SRR3675509 | Other | lineage4.9 | None | SRR7069669 | Other | lineage3.1.1 | None | ERR10796596 | Other | lineage4.9 | None | ERR2512849 | Other | lineage1.1.3.1 | None | ERR4820478 | Sensitive | lineage3.1.3 | None | ERR9117805 | Other | lineage4.3.2 | None | SRR20969475 | Other | lineage1.2.1.2 | None | ERR4829207 | Sensitive | lineage2.2.1 | None | SRR7070419 | Other | lineage3 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR10796582 | Other | lineage4.3.4.1 | None | ERR10796583 | Other | lineage2.2.1 | None | SRR6045290 | RR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR18002909 | MDR-TB | lineage2.2.1 | None | SRR21676524 | Sensitive | lineage4.3.3 | None | SRR18213726 | Other | lineage3 | None | ERR4800325 | Sensitive | lineage1.1.3.3 | in | ERR4820193 | Other | lineage3 | None | ERR4815334 | Other | lineage3.1.1 | None | ERR4819641 | Other | lineage4.6.2.2 | None | ERR4817665 | Other | lineage4.8 | None | SRR19303815 | Other | lineage4.8 | None | SRR11349203 | MDR-TB | lineage4.4.1.1 | None | SRR6789628 | Sensitive | lineage4.9 | None | SRR6046848 | Other | lineage4.6.5 | None | ERR2600422 | MDR-TB | lineage2.2.1 | None | ERR978747 | Other | lineage4.8 | None | ERR3468488 | Other | La1.8.1 | None | ERR4816184 | Other | lineage4.1.2.1 | None | ERR10796631 | Other | lineage4.3.4.2;lineage4.9 | None | ERR4819640 | RR-TB | lineage4.6.2.2 | None | ERR2509885 | Other | lineage3 | None | ERR4818522 | Other | lineage3 | None | ERR4814748 | Other | lineage4.8 | None | ERR10796554 | Sensitive | lineage4.1.2 | None | SRR14801652 | HR-TB | lineage4.3.3 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | ERR911929 | Other | lineage4.8 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | ERR4821679 | Other | lineage4.3.3 | None | SRR18002980 | Other | lineage2.2.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR18002999 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342676 | HR-TB | lineage4.6.2.2 | None | ERR978735 | Other | lineage4.8 | None | DRR188816 | Sensitive | lineage4.2.2 | None | ERR4817294 | Other | lineage4.1.2 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR037504 | Other | lineage4.9.1 | None | SRR18002926 | Other | lineage2.2.1 | None | ERR4829359 | Sensitive | lineage4.7 | None | ERR4814617 | Other | lineage1.1.3.1 | None | ERR2984800 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR2101462 | Sensitive | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR18002908 | Other | lineage2.2.1 | None | SRR7646014 | MDR-TB | lineage4.2.1 | None | ERR4819967 | Other | lineage4.3.3 | None | ERR2510804 | Other | lineage2.2.1 | None | SRR6045621 | Other | lineage4.1.1.3 | None | SRR6046458 | Sensitive | lineage4.1.1.1 | gb | ERR3283006 | RR-TB | lineage4.9 | None | ERR4814767 | MDR-TB | lineage2.2.1 | None | ERR978754 | RR-TB | lineage4.8 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR4815658 | Sensitive | lineage3 | None | SRR18002987 | Other | lineage2.2.1 | None | ERR10796577 | Other | lineage4.9 | None | SRR7070144 | Other | lineage4.8 | None | SRR6153150 | Other | lineage3.1.1 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR19241806 | Sensitive | lineage4.1.2.1 | None | SRR7131216 | Other | lineage4.1.2.1 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | ERR4819093 | Other | lineage4.3.3 | None | ERR5979407 | Other | lineage3 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | ERR4820492 | Other | lineage2.2.1 | None | ERR867555 | Other | lineage3 | None | SRR7070446 | Other | lineage3 | None | ERR4815898 | Other | lineage3 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | SRR7070369 | Other | lineage1.2.2.2 | None | ERR4819002 | HR-TB | lineage4.8 | None | ERR10796620 | Other | lineage4.1.1.1 | None | SRR6045267 | RR-TB | lineage4.8 | None | SRR7070251 | Sensitive | lineage4.1.1.3.1 | None | SRR6045603 | Other | lineage4.1.1.3 | None | SRR7131147 | Other | lineage4.1.2.1 | None | ERR6197030 | Sensitive | lineage4.9 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | SRR7645927 | Other | lineage4.8 | None | SRR10315579 | Other | lineage2.2.1.1 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR867567 | RR-TB | lineage3 | None | ERR978762 | Other | lineage4.8 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR11342691 | MDR-TB | lineage2.2.1 | None | ERR2513743 | Other | lineage4.1.2 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | ERR2851359 | Other | lineage4.9 | None | SRR19304094 | Other | lineage6.1.2 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR19303949 | Other | lineage4.3.3 | None | ERR4816227 | Other | lineage3 | None | ERR4819784 | Other | lineage4.1.2.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR7070293 | Other | lineage4.8 | None | ERR3468613 | Other | La1.8.1 | None | ERR4820723 | Other | lineage4.4.1.1 | None | ERR13289811 | Sensitive | lineage4.1.1.1 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | ERR4821417 | Other | lineage1.1.3.1 | None | ERR4972567 | MDR-TB | lineage4.3.2 | None | ERR4819242 | HR-TB | lineage4.6.2.2 | None | SRR7069193 | Other | lineage4.3.1.1 | None | ERR2027220 | Sensitive | lineage3.1.3 | None | ERR2512423 | Other | lineage4.1.1.3 | None | ERR911930 | Other | lineage4.8 | None | ERR4817993 | Other | lineage1.2.2.2 | None | ERR2514834 | Sensitive | lineage4.7 | None | SRR11349208 | MDR-TB | lineage2.2.1 | None | SRR7236134 | Other | La1.8.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | ERR978760 | RR-TB | lineage4.8 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002948 | Other | lineage2.2.1 | None | SRR7069797 | Sensitive | lineage3 | None | ERR4814714 | Other | lineage3 | None | SRR10315462 | RR-TB | lineage4.3.2.1 | None | ERR4821334 | Other | lineage4.1.3 | None | SRR6045496 | Other | lineage6.1.3 | None | ERR4816571 | Sensitive | lineage1.1.2 | None | SRR6046177 | Other | lineage3.1.2 | None | ERR3283032 | Other | lineage4.9 | None | SRR6046359 | Other | lineage4.7 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR7069137 | Other | lineage4.8 | None | ERR4818787 | Other | lineage6.1.2 | None | ERR9117788 | Other | lineage3 | None | SRR7131145 | Other | lineage4.1.2.1 | None | SRR11342643 | MDR-TB | lineage4.1.1.1 | None | ERR10796558 | Sensitive | lineage4.3.4.1;lineage4.9 | None | ERR10796588 | Other | lineage4.3.3 | None | SRR7755652 | Pre-XDR-TB | lineage2.2.1;lineage4.2.1 | None | SRR5818397 | Other | lineage4.9 | None | SRR5818448 | Other | lineage4.9 | None | ERR2514430 | Other | lineage3.1.2;lineage4.1.1.3.1 | None | ERR10796593 | Other | lineage4.3 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR13180370 | Other | lineage4.1.4 | None | ERR4815467 | Other | lineage3 | None | ERR5311077 | Other | La1.8.1 | None | ERR4818988 | Other | lineage1.2.2 | None | SRR18003049 | Other | lineage2.2.1 | None | SRR28409635 | Sensitive | lineage4.1.1.1 | None | ERR4821616 | Other | lineage1.1.3.1 | None | ERR4814496 | Sensitive | lineage4.1.2 | None | SRR6046250 | Other | lineage4.9 | None | SRR11342685 | HR-TB | lineage4.4.1.1 | None | ERR2228900 | Other | lineage4.8 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | ERR4822176 | Other | lineage4.1.1.2 | None | SRR11342638 | MDR-TB | lineage4.4.1.1.1 | None | ERR4818831 | Other | lineage3 | None | ERR4820801 | Other | lineage1.2.2.2 | None | SRR7070571 | Sensitive | lineage3 | None | SRR7069648 | Other | lineage4.6.2.2 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | ERR4817584 | Other | lineage3;lineage4.9 | None | ERR13290062 | Sensitive | lineage4.1.1.1 | None | ERR4769480 | Other | La1.3 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173740 | Other | lineage3;lineage4 | None | ERR10796568 | Other | lineage4.9 | None | ERR4819982 | Sensitive | lineage2.2.1 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR4816397 | Other | lineage1.1.2 | None | ERR4818785 | Sensitive | lineage4.1.2.1 | None | SRR18003032 | Other | lineage2.2.1 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | ERR978746 | RR-TB | lineage4.8 | None | ERR4829323 | Other | lineage4.8 | None | ERR4818407 | Other | lineage4.3.2 | None | ERR4818752 | Other | lineage3 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR4820572 | Other | lineage1.2.1.2.1 | None | ERR4820833 | Other | lineage3;lineage4.9 | None | ERR2513413 | Sensitive | lineage3.1.2.1 | None | ERR4815104 | Sensitive | lineage4.8 | None | ERR867571 | Other | lineage4.9 | None | ERR978726_ERR978727 | RR-TB | lineage4.8 | None | ERR4821488 | Sensitive | lineage4.1.3 | None | SRR5818408 | Other | lineage4.9 | None | SRR6045384 | Other | lineage4.1.2.1 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR7069027 | MDR-TB | lineage4.3.4.2 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR867573 | Other | lineage4.9 | None | ERR4821054 | Sensitive | lineage3 | None | ERR4814821 | Other | lineage2.2.1 | None | ERR4821222 | Other | lineage4.3.2.1 | None | ERR4819491 | Other | lineage4.1.2.1 | None | ERR4816464 | Other | lineage3 | None | ERR4818507 | Other | lineage4.1.2.1 | None | ERR4816093 | Other | lineage1.1.3 | None | ERR10796636 | Other | lineage4.1.2.1 | None | SRR1735598 | RR-TB | lineage4.9 | None | ERR4821288 | Other | lineage4.7 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | SRR5818684 | Other | lineage4.2.2.2 | None | SRR7645971 | Other | lineage2.2.1 | None | SRR11342695 | MDR-TB | lineage4.8 | None | ERR2514692 | Other | None | ERR978757 | RR-TB | lineage4.8 | None | SRR11349207 | RR-TB | lineage2.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR9971197 | MDR-TB | lineage4.4.1.1.1 | None | ERR10796635 | Other | lineage4.8 | None | ERR4818065 | Other | lineage4.1.2.1 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None | SRR6046729 | Other | lineage3 | None | ERR10796555 | Other | lineage4.1.2.1 | None | ERR10796629 | Other | lineage4.1;lineage4.9 | None | ERR046976 | Sensitive | lineage4.1.1.1 | None | ERR4818977 | Other | lineage4.1.2.1 | None | ERR4819615 | Other | lineage4.3.4.2.1 | None | ERR4820746 | Other | lineage3 | None | SRR12062533 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR19325518 | MDR-TB | lineage2.2.1 | None | SRR7069391 | Other | lineage4.9 | None | SRR18002956 | Other | lineage2.2.1 | None | ERR4815787 | Other | lineage2.2.1 | None | ERR978752 | Other | lineage4.8 | None | ERR4820817 | Other | lineage4.1.2.1 | None | ERR4814763 | Other | lineage2.2.1 | None | ERR867575 | Other | lineage4.9 | None | ERR4816760 | Sensitive | lineage4.1.2.1 | None | ERR4820408 | Other | lineage4.1.2.1 | None | ERR4817853 | Other | lineage4.8.1 | None | ERR9117740 | Other | lineage3.1.1 | None | ERR867569 | Other | lineage4.9 | None | ERR10796581 | Other | lineage4.1.2 | None | ERR4820713 | HR-TB | lineage4.8 | None | ERR4820959 | Other | lineage4.1.2.1 | None | ERR4819206 | Other | lineage4.8 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR10303325 | MDR-TB | lineage2.2.1 | None | SRR18002901 | MDR-TB | lineage2.2.1 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR6045553 | Other | lineage4.1.2.1;lineage4.9 | None | ERR2446509 | Other | lineage3 | nl | SRR7070521 | Other | lineage4.2.1.1 | None | ERR4816692 | Other | lineage4.1.2.1 | None | ERR4818726 | Other | lineage4.1.2.1 | None | ERR4814952 | Sensitive | lineage3 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | ERR4817134 | HR-TB | lineage2.2.1 | None | SRR3675230 | Other | lineage3;lineage4 | None | ERR4769433 | RR-TB | lineage4.9 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | ERR4814874 | Sensitive | lineage1.1.2 | None | ERR10796615 | Other | lineage4.3.3;lineage4.9 | None | ERR4816604 | Sensitive | lineage4.1.2 | None | SRR6045325 | Other | lineage4.8.1 | gb | SRR6045591 | Other | lineage4.1.2.1 | None | SRR6045516 | Other | lineage3.1.1 | None | SRR6046020 | Other | lineage3 | None | ERR4817131 | Other | lineage3.1.3;lineage4.9 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR19304104 | Other | lineage4.8 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | SRR3675245 | Other | lineage4.1.2.1 | None | ERR4816967 | Other | lineage5 | None | ERR978693 | Other | lineage4.8 | None | SRR13888750 | Other | La2 | None | ERR4815193 | MDR-TB | lineage4.8 | None | ERR4800297 | Other | lineage4.1.1.3 | in | ERR2512606 | HR-TB | lineage3 | None | SRR11349187 | Pre-XDR-TB | lineage4.8.1 | None | SRR3675582 | Other | lineage4.9 | None | SRR7069999 | Sensitive | lineage5.1.3 | None | ERR4814841 | Other | lineage4.1 | None | SRR19303876 | Other | lineage4.7 | None | SRR7070479 | Other | lineage4.1.2 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR6046484 | Other | lineage1.2.2.2 | None | SRR6044841 | Other | lineage4.9 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | SRR18002945 | Other | lineage2.2.1 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | SRR18003007 | MDR-TB | lineage4.5 | None | ERR4818583 | Other | lineage4.3.3 | None | ERR10796595 | Other | lineage4.9 | None | SRR7070329 | Other | lineage3 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | ERR10796617 | Other | lineage4.3.4.1 | None | SRR12062542 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR5818464 | Other | lineage4.9 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR4815171 | HR-TB | lineage1.1.2 | None | ERR171142 | Other | lineage3.1.1;lineage4.9 | None | ERR4816270 | Other | lineage4.1.2.1 | None | ERR4829333 | Other | lineage4 | None | ERR4815909 | Other | lineage4.8 | None | ERR4818173 | Other | lineage2.2.1 | None | ERR4816562 | Other | lineage4.8 | None | ERR4819528 | RR-TB | lineage3 | None | ERR4817189 | Other | lineage4.7 | None | ERR4829337 | Sensitive | lineage4.8 | None | ERR4821602 | Other | lineage4.8 | None | ERR4816043 | Other | lineage4.2.2 | None | ERR2027230 | Other | lineage4.2.2.2 | None | ERR2027255 | HR-TB | lineage4.4.1.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR4816699 | Other | lineage4.6 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR4820410 | RR-TB | lineage3.1.1 | None | SRR6044904 | Other | lineage3 | None | ERR4817085 | Pre-XDR-TB | lineage2.2.1 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | SRR7131182 | Other | lineage4.1.2.1 | None | SRR6045944 | Other | lineage4.1.2.1 | None | SRR11349201 | MDR-TB | lineage4.1.1.3 | None | ERR4820075 | Other | lineage4.1.2.1 | None | ERR4822105 | Other | lineage4.1.4 | None | SRR18002961 | Other | lineage2.2.1 | None | SRR18002964 | Other | lineage2.2.1 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR7070154 | Other | lineage4.4.1.1 | None | ERR10796553 | Other | lineage4.9 | None | ERR2514968 | Sensitive | lineage4.3.3 | None | SRR18003033 | Other | lineage2.2.1 | None | ERR4815849 | Other | lineage3.1.1 | None | ERR4817826 | Other | lineage4.5 | None | ERR4818128 | Other | lineage4.1.2.1 | None | ERR4819217 | Other | La1.3;lineage1.2.2.2 | None | ERR502517 | Other | lineage5.1.1 | None | ERR4816510 | Other | lineage4.1.2.1 | None | ERR2509886 | Other | lineage3 | None | SRR7069074 | Other | lineage3 | None | ERR2515032 | Other | lineage3 | None | ERR10796598 | Other | lineage4.9 | None | ERR4821572 | Sensitive | lineage2.1 | None | SRR7131234 | Other | lineage4.9 | None | ERR4815502 | Other | lineage4.1 | None | DRR034348 | Other | lineage2.2.1 | None | SRR7070515 | Other | lineage1.1.3.1 | None | SRR7070602 | Other | lineage4.2.1 | None | SRR7131195 | Other | lineage2.2.1 | None | ERR4821492 | HR-TB | lineage3 | None | ERR3276155 | Other | lineage4.1.2.1 | nl | ERR10796566 | Other | lineage4.9 | None | ERR9117760 | HR-TB | lineage4.3 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | ERR4814896 | Other | lineage2.2.1.1 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR4822034 | Sensitive | lineage3.1.2.1 | None | SRR19303899 | Other | lineage3 | None | SRR6046442 | Other | lineage3 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | SRR7070134 | Other | lineage3.1.1 | None | ERR2027253 | Other | lineage6.2.3 | None | ERR4817060 | Other | None | ERR046739 | Sensitive | lineage4.1.1.1 | gb | SRR11342646 | HR-TB | lineage3 | None | ERR4820161 | Other | lineage3 | None | ERR4820827 | Other | lineage4.1.2 | None | ERR4821007 | Other | lineage1.2.2.2 | None | ERR867521 | MDR-TB | lineage2.2.1 | None | SRR1173281 | Other | lineage3 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR21732409 | Sensitive | lineage4.1.1.1 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR9971372 | MDR-TB | lineage4.1.1.1 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | SRR18003045 | Other | lineage2.2.1 | None | SRR19303907 | Other | lineage4.8 | None | SRR7070195 | Sensitive | lineage3.1.2.1 | None | ERR2509890 | Sensitive | lineage4.1.1.1 | gb | ERR2514492 | Sensitive | lineage4.1.1.1 | gb | ERR2512665 | Sensitive | lineage4.1.1.1 | gb | SRR6045909 | Other | lineage4.8.1 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR7646018 | MDR-TB | lineage4.2.1 | None | ERR867544 | Other | lineage4.9 | None | ERR867570 | RR-TB | lineage4.9 | None | ERR10796592 | Other | lineage4.9 | None | ERR4819087 | Other | lineage4.3.3 | None | ERR046946 | Sensitive | lineage4.1.1.1 | gb | SRR19303805 | Sensitive | lineage4.8 | None | SRR3675288 | Other | lineage3 | None | ERR4816493 | Other | lineage4.1.2.1 | None | ERR4816818 | Other | lineage4.8.2 | None | ERR10796561 | Other | lineage4.3.2 | None | ERR10796591 | Other | lineage4.9 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | ERR3275190 | Other | lineage3 | nl | ERR978751 | Other | lineage4.8 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | ERR4816009 | Other | lineage1.1.2 | None | ERR4816690 | Other | None | ERR4816856 | Other | lineage4.1.2.1 | None | ERR4816868 | Other | lineage4.4.1.1 | None | SRR9971223 | Other | lineage2.2.1 | None | ERR10796560 | Other | lineage4.9 | None | ERR4818261 | Other | lineage1.1.2 | None | SRR3675261 | Other | lineage1.2.1.1 | None | ERR4818964 | Other | lineage1.2.1.2.1 | None | ERR4819007 | Other | lineage2.2.1 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR7755657 | Other | lineage4.8 | None | SRR6044936 | Other | lineage4.6 | None | ERR4815780 | MDR-TB | lineage4.1.3 | None | ERR978755 | RR-TB | lineage4.8 | None | ERR4816866 | Other | lineage2.2.1 | None | ERR4816928 | HR-TB | lineage1.2.2.2 | None | ERR10796562 | Other | lineage4.3.4.1 | None | ERR4820290 | Other | lineage3 | None | ERR911929_ERR911930 | Other | lineage4.8 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003009 | MDR-TB | lineage2.2.1 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | SRR7070223 | HR-TB | lineage3 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR9971200 | MDR-TB | lineage4.3.2 | None | ERR4821331 | HR-TB | lineage4.8 | None | ERR2984782 | Pre-XDR-TB | lineage4.3.3 | None | ERR4818663 | Other | lineage3 | None | ERR4815079 | RR-TB | lineage3 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | ERR4817703 | Other | lineage1.1.1.1 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR4819766 | Other | lineage4.4.1.1 | None | ERR4819772 | Other | lineage1.1.3.1 | None | ERR4819948 | Other | lineage4.4.1.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | ERR4814362 | Other | lineage4.8 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR6046440 | Other | lineage3.1.2.2 | None | SRR3675513 | Other | lineage4.8 | None | SRR6045464 | Other | lineage4.1.1.3 | None | ERR4816243 | Sensitive | lineage3 | None | ERR4818489 | Other | lineage1.1.3.1 | None | SRR7131236 | Other | lineage4.3.4.2 | None | SRR1173719 | Other | lineage4.9 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR3675565 | Other | lineage4 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | ERR10796594 | Other | lineage4.9 | None | ERR10796640 | Other | lineage4.1.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR978756 | Other | lineage4.8 | None | SRR6045843 | Other | lineage4.2.2.2 | None | ERR4815165 | Other | lineage4.1.2.1 | None | ERR4815225 | Other | lineage1.2.2.2 | None | ERR046962 | Sensitive | lineage4.1.1.1 | gb | SRR7131229 | Other | lineage4.1.2.1 | None | ERR4814745 | Other | lineage4.6.5 | None | SRR7131123 | Other | lineage4.8 | None | ERR4814986 | Other | lineage4.3.4.2 | None | SRR7645899 | Other | lineage2.2.1 | None | ERR10796571 | Other | lineage4.9 | None | ERR10796589 | Other | lineage4.9 | None | ERR4819737 | Sensitive | lineage4.1.2.1 | None | SRR7069835 | Other | lineage2.2.1 | None | SRR7070320 | Other | lineage4.8 | None | SRR3675491 | Other | lineage4.7 | None | ERR10796634 | Other | lineage4.7 | None | SRR7131237 | Other | lineage2.2.1 | None | ERR4822114 | Other | lineage4.1.2.1 | None | ERR10796632 | Other | lineage4.3.3 | None | ERR4818890 | Sensitive | lineage4.7 | None | ERR4820019 | Other | lineage4.3.4.2.1 | None | ERR10796599 | Other | lineage4.8 | None | ERR10796597 | Other | lineage4.3.3 | None | ERR072034 | Sensitive | lineage4.1.1.1 | gb | ERR072036 | Sensitive | lineage4.1.1.1 | gb | SRR2100096 | Sensitive | lineage4.1.1.1 | None | SRR13180206 | Sensitive | lineage4.8 | None | ERR2513405 | Other | lineage2.2.1 | None | SRR1173310 | Other | lineage3.1.1 | None | SRR12708406 | HR-TB | lineage2.2.1;lineage4.9 | None | ERR4820777 | Sensitive | lineage4.1.2.1 | None | ERR4822222 | Other | lineage3.1.2.2 | None | SRR6046343 | Other | lineage2.2.1 | None | SRR7131061 | Other | lineage2.2.1 | None | SRR7131287 | Other | lineage2.2.1.1 | None | ERR10796627 | Other | lineage4.1.2.1;lineage4.9 | None | ERR978727 | Other | lineage4.8 | None | ERR4815811 | Other | lineage4.2.1.1 | None | ERR4829328 | Other | lineage2.2.1 | None | SRR7069097 | Other | lineage3.1.2.1 | None | SRR7069179 | Sensitive | lineage4.9 | None | SRR7069314 | Other | lineage3 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | ERR046988 | Sensitive | lineage4.1.1.1 | gb | ERR4821286 | Other | lineage4.8 | None | ERR046975 | Sensitive | lineage4.1.1.1 | gb | ERR1163055 | MDR-TB | lineage4.8 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | SRR6045952 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR4814911 | Other | lineage4.3.3 | None | ERR4821214 | Other | lineage1.2.1.2.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR10315465 | MDR-TB | lineage4.4.1.1 | None | ERR4814783 | Other | lineage4.7 | None | SRR7645928 | Other | lineage4.7 | None | ERR4815910 | Other | lineage4.1.2.1 | None | ERR4820324 | Other | lineage4 | None | ERR4821409 | Other | lineage4.8 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | ERR4814843 | Other | lineage1.1.3 | None | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | SRR10430377 | MDR-TB | lineage2.2.1 | None | SRR7069033 | Sensitive | lineage4.2.1 | None | SRR21714038 | Sensitive | lineage4.3.3 | None | SRR5007204 | Other | lineage4.1.2.1 | None | ERR4819313 | Sensitive | lineage3.1.1 | None | ERR4819593 | Sensitive | lineage4.5 | None | SRR6045424 | Other | lineage1.1.2 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | SRR5007165 | Other | lineage3 | None | ERR4817342 | Other | lineage4.1.1.1 | None | ERR4818556 | Sensitive | lineage3 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | ERR4821176 | Other | lineage2.2.1 | None | SRR7069347 | Other | lineage4.1.2.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR7069931 | Other | lineage4.2.2.2 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR6046815 | Other | lineage3 | None | ERR4820742 | Sensitive | lineage4.3.4.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR7645977 | MDR-TB | lineage4.2.1 | None | ERR2515055 | Sensitive | lineage3 | None | ERR4829816 | RR-TB | lineage4.4.1.1 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR978726 | RR-TB | lineage4.8 | None | SRR7755655 | Other | lineage4.1.2.1 | None | ERR4819456 | Other | lineage4.8 | None | SRR6046210 | Other | lineage4.9 | None | SRR6045957 | Other | lineage4.9 | None | ERR4814415 | Other | lineage3.1.1 | None | ERR10796626 | Other | lineage4.1.2.1 | None | SRR7069800 | Other | lineage3.1.2.1 | None | ERR4819307 | Other | lineage4.3.2 | None | SRR3675552 | Other | lineage4.9 | None | SRR6046117 | Other | lineage4.9 | None | ERR4829208 | Other | lineage4.8 | None | SRR6397640 | Other | lineage4.2.1.1 | None | ERR4815452 | Other | lineage4.3.3 | None | ERR4817497 | Other | lineage1.1.2 | None | ERR978734 | RR-TB | lineage4.8 | None | SRR10321138 | Other | La3 | None | SRR5007170 | Other | lineage4.9 | None | ERR978694 | Other | lineage4.8 | None | SRR12420628 | MDR-TB | lineage2.2.1 | None | ERR400439 | Sensitive | lineage4.1.1.1 | gb | ERR400507 | Sensitive | lineage4.1.1.1 | gb | ERR400558 | Sensitive | lineage4.1.1.1 | gb | ERR4819578 | Sensitive | lineage4.1.1.1 | gb | SRR12062551 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342648 | MDR-TB | lineage4.1.1.3 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | ERR4816133 | Other | La1.8.2 | None | ERR4817547 | Other | lineage4.2.2.1 | None | ERR4818176 | Other | lineage4.1.2.1 | None | SRR6044787 | Sensitive | lineage4.4 | None | SRR6045778 | Other | lineage3.1 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4817398 | Other | lineage3.1.1 | None | ERR046980 | Sensitive | lineage4.1.1.1 | gb | SRR5818694 | Other | lineage3;lineage4.2.2.2 | None | ERR046991 | Sensitive | lineage4.1.1.1 | gb | ERR3077969 | Other | La1.3 | None | ERR072020 | Sensitive | lineage4.1.1.1 | gb | SRR21240055 | Other | lineage4.1.2.1 | None | ERR4818825 | HR-TB | lineage4.1.2.1 | None | ERR4829289 | Sensitive | lineage4.1.2.1 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR12062493 | Pre-XDR-TB | lineage4.4.2 | None | ERR978750 | RR-TB | lineage4.8 | None | ERR4820026 | Other | lineage3 | None | ERR4815919 | Other | lineage4.8 | None | ERR4815777 | Other | lineage4.9 | None | ERR4818574 | Sensitive | lineage6.1.2 | None | SRR6397733 | Other | lineage4.4.1.2 | None | SRR22048536 | Other | lineage4.3.3 | None | SRR7068875 | Other | lineage3.1.2.2 | None | ERR978733 | RR-TB | lineage4.8 | None | SRR6046275 | Other | lineage3.1.1;lineage4 | None | ERR4821981 | Other | lineage4.1.2.1 | None | SRR7069922 | Other | lineage2.2.1 | None | ERR978761 | Other | lineage4.8 | None | SRR7069473 | Other | lineage4.1.1.2 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | ERR9117812 | Other | lineage4.3.1.1 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | SRR5818395 | Sensitive | lineage4.9 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | SRR11349191 | Pre-XDR-TB | lineage4.3.3 | None | SRR22048550 | Other | lineage1.1.3.1 | None | SRR11342684 | HR-TB | lineage4.4.1.1 | None | ERR4816610 | Other | lineage4.3.3 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR4816833 | Other | lineage4.1.1.3 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR2600562 | MDR-TB | lineage2.2.1;lineage4.8 | None | ERR4816310 | HR-TB | lineage4.6.1.2 | None | ERR4815143 | HR-TB | lineage4.2.2.2 | None | ERR4819017 | Other | lineage3 | None | ERR2510794 | Other | lineage4.3.4.2 | None | ERR4816462 | Other | lineage4.1.2.1 | None | SRR21727760 | Other | lineage2.2.1 | None | ERR4816476 | Other | lineage3.1.2.1 | None | SRR7070553 | Other | lineage3 | None | ERR4816403 | Other | lineage6.2.3 | None | ERR978694_ERR978693 | Other | lineage4.8 | None | ERR4820720 | Other | lineage4.1.2.1 | None | SRR3675265 | Other | lineage4 | None | SRR18002974 | Other | lineage2.2.1 | None | ERR4819525 | Other | lineage3 | None | ERR4822138 | Other | lineage4.1.2.1 | None | SRR18002995 | Other | lineage4.4.2 | None | ERR9117827 | Other | lineage1.2.2.2 | None | SRR11342669 | Other | lineage4.8 | None | ERR2513830 | RR-TB | lineage4.8 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | SRR18002876 | MDR-TB | lineage2.2.1;lineage2.2.2 | None | ERR4815551 | Other | lineage2.2.1 | None | SRR7068873 | Other | lineage4.8 | None | ERR3806588 | Other | lineage6.1.3 | None | SRR18909918 | Other | lineage2.2.1.1 | None |
|---|
