Run ID: SRR19303820
Sample name:
Date: 03-04-2023 21:08:08
Number of reads: 792653
Percentage reads mapped: 9.45
Strain: lineage4.8
Drug-resistance: RR-TB
Drug | Resistance | Supporting mutations |
---|
Lineage | Family | Main Spoligotype | RDs | Frequency |
---|---|---|---|---|
lineage4 | Euro-American | LAM;T;S;X;H | None | 1.0 |
lineage4.8 | Euro-American (mainly T) | T1;T2;T3;T5 | RD219 | 1.0 |
Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs |
---|---|---|---|---|---|
rpoB | 761127 | p.Ser441Ala | missense_variant | 0.47 | rifampicin |
rpoB | 761196 | p.Leu464Met | missense_variant | 0.15 | rifampicin |
rrs | 1472644 | n.799C>T | non_coding_transcript_exon_variant | 0.38 | streptomycin |
rrs | 1472733 | n.888G>A | non_coding_transcript_exon_variant | 0.5 | streptomycin |
rrs | 1473247 | n.1402C>A | non_coding_transcript_exon_variant | 0.75 | kanamycin, capreomycin, aminoglycosides, amikacin |
rrs | 1473329 | n.1484G>T | non_coding_transcript_exon_variant | 0.68 | kanamycin, capreomycin, aminoglycosides, amikacin |
Gene | Chromosome position | Mutation | Type | Estimated fraction |
---|---|---|---|---|
gyrA | 7362 | p.Glu21Gln | missense_variant | 1.0 |
fgd1 | 491310 | c.528C>G | synonymous_variant | 0.4 |
mshA | 576113 | p.Arg256Gly | missense_variant | 0.44 |
mshA | 576453 | p.Val369Gly | missense_variant | 0.25 |
ccsA | 619968 | c.78G>A | synonymous_variant | 0.18 |
rpoB | 761015 | c.1209G>C | synonymous_variant | 0.16 |
rpoB | 761021 | c.1215G>C | synonymous_variant | 0.17 |
rpoB | 761027 | c.1221A>G | synonymous_variant | 0.17 |
rpoB | 761031 | p.Gln409Asn | missense_variant | 0.16 |
rpoB | 761036 | c.1230G>C | synonymous_variant | 0.15 |
rpoB | 761037 | c.1231_1233delTTGinsCTC | synonymous_variant | 0.19 |
rpoB | 761054 | c.1248G>C | synonymous_variant | 0.31 |
rpoB | 761058 | p.Val418Thr | missense_variant | 0.25 |
rpoB | 761088 | c.1282_1283delAGinsTC | synonymous_variant | 0.45 |
rpoB | 761096 | c.1290G>C | synonymous_variant | 0.5 |
rpoB | 761102 | c.1296A>G | synonymous_variant | 0.52 |
rpoB | 761132 | c.1326G>C | synonymous_variant | 0.45 |
rpoB | 761133 | c.1327T>C | synonymous_variant | 0.45 |
rpoB | 761150 | c.1344A>C | synonymous_variant | 0.38 |
rpoB | 761154 | p.Ser450Asn | missense_variant | 0.32 |
rpoB | 761159 | c.1353G>C | synonymous_variant | 0.32 |
rpoB | 761165 | c.1359G>T | synonymous_variant | 0.22 |
rpoB | 761180 | c.1374A>C | synonymous_variant | 0.25 |
rpoB | 761189 | c.1383T>C | synonymous_variant | 0.2 |
rpoB | 761193 | p.Gly463Ser | missense_variant | 0.15 |
rpoB | 761213 | c.1407G>C | synonymous_variant | 0.14 |
rpoB | 761990 | c.2184G>C | synonymous_variant | 0.14 |
rpoB | 761999 | c.2193G>C | synonymous_variant | 0.17 |
rpoB | 762003 | p.Asn733Gln | missense_variant | 0.17 |
rpoB | 762009 | p.Leu735Val | missense_variant | 0.16 |
rpoB | 762016 | p.Glu737Ala | missense_variant | 0.16 |
rpoB | 762024 | p.Val740Met | missense_variant | 0.16 |
rpoB | 762053 | c.2247T>C | synonymous_variant | 0.14 |
rpoB | 762057 | p.Ile751Val | missense_variant | 0.15 |
rpoB | 762062 | c.2256T>C | synonymous_variant | 0.15 |
rpoB | 762065 | c.2259T>C | synonymous_variant | 0.18 |
rpoB | 762110 | c.2304G>C | synonymous_variant | 0.15 |
rpoB | 762114 | p.Ile770Val | missense_variant | 0.12 |
rpoB | 762143 | c.2337T>C | synonymous_variant | 0.18 |
rpoB | 762149 | c.2343G>C | synonymous_variant | 0.17 |
rpoB | 762156 | p.Val784Ile | missense_variant | 0.19 |
rpoB | 762167 | c.2361T>C | synonymous_variant | 0.24 |
rpoB | 762176 | c.2370T>C | synonymous_variant | 0.21 |
rpoB | 762185 | c.2379G>C | synonymous_variant | 0.23 |
rpoB | 762194 | c.2388G>C | synonymous_variant | 0.26 |
rpoB | 762197 | c.2391C>G | synonymous_variant | 0.12 |
rpoB | 762212 | c.2406G>C | synonymous_variant | 0.13 |
rpoB | 762245 | c.2439G>C | synonymous_variant | 0.23 |
rpoB | 762248 | c.2442G>C | synonymous_variant | 0.14 |
rpoB | 762254 | c.2448T>C | synonymous_variant | 0.24 |
rpoB | 762879 | p.Met1025Leu | missense_variant | 0.14 |
rpoC | 762887 | c.-483G>C | upstream_gene_variant | 0.17 |
rpoC | 762896 | c.-474G>C | upstream_gene_variant | 0.13 |
rpoC | 762926 | c.-444C>G | upstream_gene_variant | 0.26 |
rpoC | 762929 | c.-441G>C | upstream_gene_variant | 0.15 |
rpoC | 762938 | c.-432G>C | upstream_gene_variant | 0.14 |
rpoC | 762962 | c.-408C>T | upstream_gene_variant | 0.15 |
rpoC | 762971 | c.-399G>C | upstream_gene_variant | 0.3 |
rpoC | 762980 | c.-390T>C | upstream_gene_variant | 0.14 |
rpoC | 762989 | c.-381G>C | upstream_gene_variant | 0.29 |
rpoC | 762995 | c.-375G>C | upstream_gene_variant | 0.18 |
rpoB | 763005 | p.Cys1067Val | missense_variant | 0.17 |
rpoB | 763014 | p.Met1070Leu | missense_variant | 0.18 |
rpoB | 763017 | p.Gln1071Glu | missense_variant | 0.19 |
rpoC | 763028 | c.-342T>C | upstream_gene_variant | 0.21 |
rpoC | 763031 | c.-339T>C | upstream_gene_variant | 0.14 |
rpoB | 763038 | p.Thr1078Ala | missense_variant | 0.21 |
rpoC | 763043 | c.-327G>C | upstream_gene_variant | 0.2 |
rpoC | 763053 | c.-317T>C | upstream_gene_variant | 0.36 |
rpoC | 763067 | c.-303C>G | upstream_gene_variant | 0.19 |
rpoC | 763070 | c.-300T>C | upstream_gene_variant | 0.23 |
rpoB | 763077 | p.Val1091Thr | missense_variant | 0.27 |
rpoC | 763103 | c.-267G>C | upstream_gene_variant | 0.16 |
rpoC | 763456 | c.87A>G | synonymous_variant | 0.15 |
rpoC | 763468 | c.99G>C | synonymous_variant | 0.23 |
rpoC | 763483 | c.114G>C | synonymous_variant | 0.17 |
rpoC | 763486 | c.117T>C | synonymous_variant | 0.27 |
rpoC | 763492 | c.123G>C | synonymous_variant | 0.27 |
rpoC | 763507 | c.138G>C | synonymous_variant | 0.31 |
rpoC | 763528 | c.159G>C | synonymous_variant | 0.36 |
rpoC | 763531 | c.162G>C | synonymous_variant | 0.38 |
rpoC | 763534 | c.165T>C | synonymous_variant | 0.31 |
rpoC | 763537 | c.168C>G | synonymous_variant | 0.25 |
rpoC | 763546 | c.177A>G | synonymous_variant | 0.24 |
rpoC | 763550 | p.Tyr61Ala | missense_variant | 0.31 |
rpoC | 763570 | c.201G>T | synonymous_variant | 0.27 |
rpoC | 763578 | p.Phe70Tyr | missense_variant | 0.38 |
rpoC | 763585 | c.216C>G | synonymous_variant | 0.2 |
rpoC | 763589 | p.Ile74Val | missense_variant | 0.24 |
rpoC | 763606 | c.237C>A | synonymous_variant | 0.23 |
rpoC | 763615 | c.246G>C | synonymous_variant | 0.31 |
rpoC | 763618 | c.249C>T | synonymous_variant | 0.27 |
rpoC | 763622 | p.Ala85Ser | missense_variant | 0.36 |
rpoC | 763636 | c.267T>C | synonymous_variant | 0.19 |
rpoC | 763642 | c.273G>C | synonymous_variant | 0.4 |
rpoC | 763647 | p.Gly93Ala | missense_variant | 0.29 |
rpoC | 763654 | c.285C>T | synonymous_variant | 0.16 |
rpoC | 763655 | p.Glu96Lys | missense_variant | 0.26 |
rpoC | 763660 | c.291T>C | synonymous_variant | 0.29 |
rpoC | 763669 | c.300C>G | synonymous_variant | 0.24 |
rpoC | 763696 | c.327T>C | synonymous_variant | 0.41 |
rpoC | 763699 | c.330G>T | synonymous_variant | 0.31 |
rpoC | 763708 | c.339G>C | synonymous_variant | 0.44 |
rpoC | 763714 | c.345G>C | synonymous_variant | 0.37 |
rpoC | 763717 | c.348T>C | synonymous_variant | 0.21 |
rpoC | 763723 | c.354G>C | synonymous_variant | 0.21 |
rpoC | 763724 | p.Asp119Asn | missense_variant | 0.18 |
rpoC | 763729 | c.360G>C | synonymous_variant | 0.19 |
rpoC | 763732 | c.363C>G | synonymous_variant | 0.33 |
rpoC | 763735 | c.366G>C | synonymous_variant | 0.18 |
rpoC | 763751 | p.Ile128Val | missense_variant | 0.3 |
rpoC | 763772 | p.Val135Met | missense_variant | 0.21 |
rpoC | 764485 | c.1116G>C | synonymous_variant | 0.19 |
rpoC | 764491 | c.1122G>T | synonymous_variant | 0.18 |
rpoC | 764497 | p.Glu376Asp | missense_variant | 0.18 |
rpoC | 764498 | p.Ser377Ala | missense_variant | 0.18 |
rpoC | 764503 | c.1134G>C | synonymous_variant | 0.26 |
rpoC | 764509 | c.1140G>C | synonymous_variant | 0.3 |
rpoC | 764521 | c.1152T>C | synonymous_variant | 0.3 |
rpoC | 764536 | c.1167G>C | synonymous_variant | 0.3 |
rpoC | 764539 | c.1170C>G | synonymous_variant | 0.35 |
rpoC | 764548 | c.1179G>C | synonymous_variant | 0.38 |
rpoC | 764549 | p.Pro394Val | missense_variant | 0.38 |
rpoC | 764566 | c.1197C>G | synonymous_variant | 0.44 |
rpoC | 764572 | c.1203G>C | synonymous_variant | 0.44 |
rpoC | 764575 | c.1206T>G | synonymous_variant | 0.39 |
rpoC | 764581 | c.1212T>C | synonymous_variant | 0.41 |
rpoC | 764582 | p.Leu405Met | missense_variant | 0.42 |
rpoC | 764605 | c.1236G>C | synonymous_variant | 0.43 |
rpoC | 764611 | c.1242G>C | synonymous_variant | 0.45 |
rpoC | 764620 | c.1251G>C | synonymous_variant | 0.36 |
rpoC | 764623 | c.1254C>G | synonymous_variant | 0.42 |
rpoC | 764632 | c.1263T>C | synonymous_variant | 0.5 |
rpoC | 764635 | c.1266C>G | synonymous_variant | 0.41 |
rpoC | 764644 | c.1275G>C | synonymous_variant | 0.45 |
rpoC | 764650 | c.1281G>T | synonymous_variant | 0.41 |
rpoC | 764651 | c.1282_1284delTCGinsAGC | synonymous_variant | 0.39 |
rpoC | 764662 | c.1293G>C | synonymous_variant | 0.45 |
rpoC | 764668 | c.1299C>T | synonymous_variant | 0.3 |
rpoC | 764671 | c.1302G>C | synonymous_variant | 0.35 |
rpoC | 764683 | c.1314G>C | synonymous_variant | 0.29 |
rpoC | 764703 | p.Lys445Ser | missense_variant | 0.19 |
rpoC | 764706 | p.Leu446Gln | missense_variant | 0.31 |
rpoC | 764713 | c.1344G>C | synonymous_variant | 0.23 |
rpoC | 764731 | c.1362G>C | synonymous_variant | 0.21 |
rpoC | 764737 | c.1368G>C | synonymous_variant | 0.12 |
rpoC | 764749 | c.1380G>C | synonymous_variant | 0.12 |
rpoC | 764755 | p.Asp462Glu | missense_variant | 0.12 |
rpoC | 765937 | c.2568T>C | synonymous_variant | 0.14 |
rpoC | 765958 | c.2589C>G | synonymous_variant | 0.14 |
rpoC | 765962 | c.2593T>C | synonymous_variant | 0.17 |
rpoC | 765988 | c.2619G>C | synonymous_variant | 0.16 |
rpoC | 765991 | c.2622C>G | synonymous_variant | 0.16 |
rpoC | 766003 | c.2634G>C | synonymous_variant | 0.18 |
rpoC | 766009 | c.2640G>C | synonymous_variant | 0.17 |
rpoC | 766021 | c.2652G>C | synonymous_variant | 0.16 |
mmpL5 | 775639 | p.Ile948Val | missense_variant | 1.0 |
mmpL5 | 776654 | c.1827A>G | synonymous_variant | 0.12 |
rpsL | 781395 | c.-165T>C | upstream_gene_variant | 1.0 |
rpsL | 781751 | c.192G>C | synonymous_variant | 0.12 |
rpsL | 781766 | c.207C>T | synonymous_variant | 0.19 |
rpsL | 781772 | c.213C>T | synonymous_variant | 0.18 |
rpsL | 781796 | p.Met79Ile | missense_variant | 0.19 |
rpsL | 781802 | c.243G>C | synonymous_variant | 0.18 |
rpsL | 781805 | c.246G>T | synonymous_variant | 0.18 |
rpsL | 781811 | c.252C>T | synonymous_variant | 0.18 |
rpsL | 781817 | c.258G>T | synonymous_variant | 0.22 |
rpsL | 781829 | c.270G>C | synonymous_variant | 0.22 |
rpsL | 781832 | c.273T>C | synonymous_variant | 0.22 |
fbiC | 1303747 | p.Thr273Ala | missense_variant | 1.0 |
Rv1258c | 1406577 | p.Gln255Arg | missense_variant | 0.12 |
rrs | 1471659 | n.-187C>T | upstream_gene_variant | 1.0 |
rrs | 1471896 | n.51T>C | non_coding_transcript_exon_variant | 0.2 |
rrs | 1471900 | n.55C>T | non_coding_transcript_exon_variant | 0.2 |
rrs | 1472068 | n.223T>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472075 | n.230A>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472078 | n.233C>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472094 | n.249T>A | non_coding_transcript_exon_variant | 0.16 |
rrs | 1472102 | n.257G>A | non_coding_transcript_exon_variant | 0.49 |
rrs | 1472106 | n.261G>A | non_coding_transcript_exon_variant | 0.69 |
rrs | 1472108 | n.263C>T | non_coding_transcript_exon_variant | 0.51 |
rrs | 1472112 | n.267C>T | non_coding_transcript_exon_variant | 0.54 |
rrs | 1472113 | n.268T>C | non_coding_transcript_exon_variant | 0.38 |
rrs | 1472123 | n.278A>T | non_coding_transcript_exon_variant | 0.18 |
rrs | 1472124 | n.279C>T | non_coding_transcript_exon_variant | 0.25 |
rrs | 1472127 | n.282C>T | non_coding_transcript_exon_variant | 0.19 |
rrs | 1472129 | n.284G>C | non_coding_transcript_exon_variant | 0.18 |
rrs | 1472130 | n.285G>A | non_coding_transcript_exon_variant | 0.17 |
rrs | 1472137 | n.292G>A | non_coding_transcript_exon_variant | 0.19 |
rrs | 1472150 | n.305T>A | non_coding_transcript_exon_variant | 0.99 |
rrs | 1472151 | n.306C>T | non_coding_transcript_exon_variant | 0.22 |
rrs | 1472155 | n.310C>T | non_coding_transcript_exon_variant | 0.26 |
rrs | 1472160 | n.315C>T | non_coding_transcript_exon_variant | 0.17 |
rrs | 1472172 | n.327T>C | non_coding_transcript_exon_variant | 0.84 |
rrs | 1472203 | n.358G>A | non_coding_transcript_exon_variant | 0.19 |
rrs | 1472210 | n.365A>C | non_coding_transcript_exon_variant | 0.18 |
rrs | 1472213 | n.368G>C | non_coding_transcript_exon_variant | 0.18 |
rrs | 1472215 | n.370A>G | non_coding_transcript_exon_variant | 0.18 |
rrs | 1472225 | n.380C>A | non_coding_transcript_exon_variant | 0.26 |
rrs | 1472234 | n.389T>C | non_coding_transcript_exon_variant | 0.14 |
rrs | 1472236 | n.391C>G | non_coding_transcript_exon_variant | 0.13 |
rrs | 1472251 | n.406G>A | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472258 | n.413A>G | non_coding_transcript_exon_variant | 0.15 |
rrs | 1472259 | n.414C>A | non_coding_transcript_exon_variant | 0.14 |
rrs | 1472282 | n.437T>G | non_coding_transcript_exon_variant | 0.85 |
rrs | 1472284 | n.439C>T | non_coding_transcript_exon_variant | 0.85 |
rrs | 1472286 | n.441C>G | non_coding_transcript_exon_variant | 0.96 |
rrs | 1472293 | n.448C>A | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472297 | n.453_465delGTCCGGGTTCTCT | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472315 | n.470T>G | non_coding_transcript_exon_variant | 0.92 |
rrs | 1472328 | n.483G>C | non_coding_transcript_exon_variant | 0.88 |
rrs | 1472332 | n.487A>G | non_coding_transcript_exon_variant | 0.92 |
rrs | 1472333 | n.488G>A | non_coding_transcript_exon_variant | 0.92 |
rrs | 1472338 | n.493A>G | non_coding_transcript_exon_variant | 0.97 |
rrs | 1472344 | n.499C>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472378 | n.533G>T | non_coding_transcript_exon_variant | 0.15 |
rrs | 1472379 | n.534T>C | non_coding_transcript_exon_variant | 0.9 |
rrs | 1472400 | n.555C>T | non_coding_transcript_exon_variant | 0.84 |
rrs | 1472412 | n.567A>G | non_coding_transcript_exon_variant | 0.18 |
rrs | 1472416 | n.571C>T | non_coding_transcript_exon_variant | 0.45 |
rrs | 1472422 | n.577T>C | non_coding_transcript_exon_variant | 0.5 |
rrs | 1472427 | n.582T>G | non_coding_transcript_exon_variant | 0.4 |
rrs | 1472435 | n.590T>C | non_coding_transcript_exon_variant | 0.67 |
rrs | 1472438 | n.593T>C | non_coding_transcript_exon_variant | 0.5 |
rrs | 1472448 | n.603T>C | non_coding_transcript_exon_variant | 0.4 |
rrs | 1472464 | n.619A>G | non_coding_transcript_exon_variant | 0.4 |
rrs | 1472476 | n.631A>G | non_coding_transcript_exon_variant | 0.6 |
rrs | 1472494 | n.649A>G | non_coding_transcript_exon_variant | 0.91 |
rrs | 1472496 | n.651T>A | non_coding_transcript_exon_variant | 0.89 |
rrs | 1472498 | n.653C>T | non_coding_transcript_exon_variant | 0.93 |
rrs | 1472507 | n.662C>G | non_coding_transcript_exon_variant | 0.27 |
rrs | 1472513 | n.668T>C | non_coding_transcript_exon_variant | 0.13 |
rrs | 1472517 | n.672T>A | non_coding_transcript_exon_variant | 0.25 |
rrs | 1472518 | n.673G>T | non_coding_transcript_exon_variant | 0.28 |
rrs | 1472530 | n.685G>A | non_coding_transcript_exon_variant | 0.4 |
rrs | 1472537 | n.692C>T | non_coding_transcript_exon_variant | 0.4 |
rrs | 1472544 | n.699C>A | non_coding_transcript_exon_variant | 0.32 |
rrs | 1472545 | n.700A>T | non_coding_transcript_exon_variant | 0.28 |
rrs | 1472549 | n.704G>A | non_coding_transcript_exon_variant | 0.23 |
rrs | 1472557 | n.712G>A | non_coding_transcript_exon_variant | 0.17 |
rrs | 1472558 | n.713G>A | non_coding_transcript_exon_variant | 0.45 |
rrs | 1472566 | n.721G>A | non_coding_transcript_exon_variant | 0.28 |
rrs | 1472569 | n.724G>A | non_coding_transcript_exon_variant | 0.46 |
rrs | 1472571 | n.726G>C | non_coding_transcript_exon_variant | 0.44 |
rrs | 1472579 | n.734G>C | non_coding_transcript_exon_variant | 0.36 |
rrs | 1472580 | n.735C>T | non_coding_transcript_exon_variant | 0.21 |
rrs | 1472581 | n.736A>T | non_coding_transcript_exon_variant | 0.98 |
rrs | 1472597 | n.752G>A | non_coding_transcript_exon_variant | 0.45 |
rrs | 1472598 | n.753A>C | non_coding_transcript_exon_variant | 0.42 |
rrs | 1472599 | n.754G>T | non_coding_transcript_exon_variant | 0.31 |
rrs | 1472607 | n.762G>A | non_coding_transcript_exon_variant | 0.44 |
rrs | 1472616 | n.771G>A | non_coding_transcript_exon_variant | 0.44 |
rrs | 1472655 | n.810G>A | non_coding_transcript_exon_variant | 0.94 |
rrs | 1472655 | n.810G>T | non_coding_transcript_exon_variant | 0.96 |
rrs | 1472658 | n.813G>A | non_coding_transcript_exon_variant | 0.42 |
rrs | 1472660 | n.815T>C | non_coding_transcript_exon_variant | 0.55 |
rrs | 1472661 | n.816A>G | non_coding_transcript_exon_variant | 0.41 |
rrs | 1472690 | n.845C>A | non_coding_transcript_exon_variant | 0.49 |
rrs | 1472692 | n.847T>C | non_coding_transcript_exon_variant | 0.51 |
rrs | 1472695 | n.850C>T | non_coding_transcript_exon_variant | 0.17 |
rrs | 1472697 | n.852T>C | non_coding_transcript_exon_variant | 0.35 |
rrs | 1472713 | n.868T>C | non_coding_transcript_exon_variant | 0.47 |
rrs | 1472714 | n.869A>G | non_coding_transcript_exon_variant | 0.5 |
rrs | 1472716 | n.871C>T | non_coding_transcript_exon_variant | 0.49 |
rrs | 1472742 | n.897C>T | non_coding_transcript_exon_variant | 0.52 |
rrs | 1472744 | n.899A>G | non_coding_transcript_exon_variant | 0.53 |
rrs | 1472755 | n.910G>A | non_coding_transcript_exon_variant | 0.3 |
rrs | 1472767 | n.922G>A | non_coding_transcript_exon_variant | 0.26 |
rrs | 1472781 | n.936C>T | non_coding_transcript_exon_variant | 0.42 |
rrs | 1472790 | n.945T>C | non_coding_transcript_exon_variant | 0.56 |
rrs | 1472793 | n.948A>T | non_coding_transcript_exon_variant | 0.44 |
rrs | 1472803 | n.958T>A | non_coding_transcript_exon_variant | 0.48 |
rrs | 1472824 | n.979T>A | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472825 | n.980G>A | non_coding_transcript_exon_variant | 0.73 |
rrs | 1472828 | n.983T>C | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472836 | n.991G>A | non_coding_transcript_exon_variant | 0.79 |
rrs | 1472837 | n.992C>T | non_coding_transcript_exon_variant | 0.73 |
rrs | 1472840 | n.995A>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472844 | n.999_1000insT | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472849 | n.1005delT | non_coding_transcript_exon_variant | 0.92 |
rrs | 1472856 | n.1012delA | non_coding_transcript_exon_variant | 0.92 |
rrs | 1472861 | n.1018dupT | non_coding_transcript_exon_variant | 0.92 |
rrs | 1472874 | n.1029C>T | non_coding_transcript_exon_variant | 0.92 |
rrs | 1472875 | n.1030T>G | non_coding_transcript_exon_variant | 0.92 |
rrs | 1472878 | n.1033G>A | non_coding_transcript_exon_variant | 0.79 |
rrs | 1472880 | n.1035G>A | non_coding_transcript_exon_variant | 0.85 |
rrs | 1472895 | n.1050C>T | non_coding_transcript_exon_variant | 0.99 |
rrs | 1472952 | n.1107T>C | non_coding_transcript_exon_variant | 0.66 |
rrs | 1472955 | n.1110C>T | non_coding_transcript_exon_variant | 0.67 |
rrs | 1472956 | n.1111T>C | non_coding_transcript_exon_variant | 0.91 |
rrs | 1472957 | n.1112C>T | non_coding_transcript_exon_variant | 0.72 |
rrs | 1472958 | n.1113A>G | non_coding_transcript_exon_variant | 0.2 |
rrs | 1472973 | n.1128A>G | non_coding_transcript_exon_variant | 0.77 |
rrs | 1472973 | n.1128A>T | non_coding_transcript_exon_variant | 0.86 |
rrs | 1472974 | n.1129A>G | non_coding_transcript_exon_variant | 0.17 |
rrs | 1472987 | n.1142G>A | non_coding_transcript_exon_variant | 0.66 |
rrs | 1472988 | n.1143T>C | non_coding_transcript_exon_variant | 0.2 |
rrs | 1472989 | n.1144G>A | non_coding_transcript_exon_variant | 0.61 |
rrs | 1472990 | n.1145A>G | non_coding_transcript_exon_variant | 0.92 |
rrs | 1473035 | n.1190G>A | non_coding_transcript_exon_variant | 0.99 |
rrs | 1473055 | n.1210C>T | non_coding_transcript_exon_variant | 0.96 |
rrs | 1473056 | n.1211A>T | non_coding_transcript_exon_variant | 0.98 |
rrs | 1473066 | n.1221A>G | non_coding_transcript_exon_variant | 0.96 |
rrs | 1473088 | n.1243A>G | non_coding_transcript_exon_variant | 0.98 |
rrs | 1473093 | n.1248C>T | non_coding_transcript_exon_variant | 0.77 |
rrs | 1473100 | n.1255G>A | non_coding_transcript_exon_variant | 0.99 |
rrs | 1473102 | n.1257C>T | non_coding_transcript_exon_variant | 0.66 |
rrs | 1473104 | n.1259C>T | non_coding_transcript_exon_variant | 0.99 |
rrs | 1473110 | n.1265T>G | non_coding_transcript_exon_variant | 0.99 |
rrs | 1473111 | n.1266A>G | non_coding_transcript_exon_variant | 0.99 |
rrs | 1473115 | n.1270G>T | non_coding_transcript_exon_variant | 0.66 |
rrs | 1473121 | n.1276T>C | non_coding_transcript_exon_variant | 0.96 |
rrs | 1473123 | n.1278A>T | non_coding_transcript_exon_variant | 0.28 |
rrs | 1473145 | n.1300C>T | non_coding_transcript_exon_variant | 0.86 |
rrs | 1473166 | n.1321G>A | non_coding_transcript_exon_variant | 0.85 |
rrs | 1473172 | n.1327T>G | non_coding_transcript_exon_variant | 0.13 |
rrs | 1473173 | n.1328C>T | non_coding_transcript_exon_variant | 0.23 |
rrs | 1473221 | n.1376C>T | non_coding_transcript_exon_variant | 0.18 |
rrs | 1473252 | n.1407T>C | non_coding_transcript_exon_variant | 0.88 |
rrs | 1473259 | n.1414C>T | non_coding_transcript_exon_variant | 0.91 |
rrs | 1473270 | n.1425G>A | non_coding_transcript_exon_variant | 0.41 |
rrs | 1473276 | n.1431A>C | non_coding_transcript_exon_variant | 0.92 |
rrs | 1473276 | n.1431A>G | non_coding_transcript_exon_variant | 0.98 |
rrs | 1473277 | n.1432G>A | non_coding_transcript_exon_variant | 0.15 |
rrs | 1473301 | n.1456T>C | non_coding_transcript_exon_variant | 0.95 |
rrs | 1473301 | n.1456T>G | non_coding_transcript_exon_variant | 0.85 |
rrs | 1473305 | n.1460G>T | non_coding_transcript_exon_variant | 0.36 |
rrs | 1473315 | n.1470T>C | non_coding_transcript_exon_variant | 0.42 |
rrs | 1473316 | n.1471C>T | non_coding_transcript_exon_variant | 0.96 |
rrl | 1473517 | n.-141A>G | upstream_gene_variant | 0.29 |
rrl | 1473676 | n.19G>A | non_coding_transcript_exon_variant | 0.33 |
rrl | 1473679 | n.22T>C | non_coding_transcript_exon_variant | 0.4 |
rrl | 1473697 | n.40C>T | non_coding_transcript_exon_variant | 0.4 |
rrl | 1473698 | n.41G>A | non_coding_transcript_exon_variant | 0.5 |
rrl | 1473718 | n.61G>T | non_coding_transcript_exon_variant | 0.44 |
rrl | 1473721 | n.64G>A | non_coding_transcript_exon_variant | 0.5 |
rrl | 1473722 | n.65G>T | non_coding_transcript_exon_variant | 0.5 |
rrl | 1473731 | n.74T>A | non_coding_transcript_exon_variant | 0.62 |
rrl | 1473744 | n.87T>C | non_coding_transcript_exon_variant | 0.57 |
rrl | 1473746 | n.89T>A | non_coding_transcript_exon_variant | 0.57 |
rrl | 1473747 | n.90C>T | non_coding_transcript_exon_variant | 0.57 |
rrl | 1473751 | n.94C>T | non_coding_transcript_exon_variant | 0.57 |
rrl | 1473753 | n.96A>G | non_coding_transcript_exon_variant | 0.57 |
rrl | 1474111 | n.454T>G | non_coding_transcript_exon_variant | 0.67 |
rrl | 1474124 | n.467G>C | non_coding_transcript_exon_variant | 0.88 |
rrl | 1474125 | n.468C>G | non_coding_transcript_exon_variant | 0.88 |
rrl | 1474130 | n.473C>T | non_coding_transcript_exon_variant | 0.91 |
rrl | 1474140 | n.483C>T | non_coding_transcript_exon_variant | 0.93 |
rrl | 1474141 | n.484G>C | non_coding_transcript_exon_variant | 0.93 |
rrl | 1474142 | n.485C>G | non_coding_transcript_exon_variant | 0.93 |
rrl | 1474151 | n.494C>T | non_coding_transcript_exon_variant | 0.95 |
rrl | 1474155 | n.498G>A | non_coding_transcript_exon_variant | 0.95 |
rrl | 1474164 | n.507C>T | non_coding_transcript_exon_variant | 0.96 |
rrl | 1474171 | n.514C>T | non_coding_transcript_exon_variant | 0.88 |
rrl | 1474181 | n.524C>T | non_coding_transcript_exon_variant | 0.89 |
rrl | 1474183 | n.526T>C | non_coding_transcript_exon_variant | 0.44 |
rrl | 1474184 | n.527C>T | non_coding_transcript_exon_variant | 0.93 |
rrl | 1474185 | n.528G>A | non_coding_transcript_exon_variant | 0.36 |
rrl | 1474197 | n.540C>T | non_coding_transcript_exon_variant | 0.94 |
rrl | 1474199 | n.542G>A | non_coding_transcript_exon_variant | 0.35 |
rrl | 1474202 | n.545T>C | non_coding_transcript_exon_variant | 0.91 |
rrl | 1474218 | n.561T>A | non_coding_transcript_exon_variant | 0.15 |
rrl | 1474249 | n.592G>T | non_coding_transcript_exon_variant | 0.84 |
rrl | 1474269 | n.612C>T | non_coding_transcript_exon_variant | 0.74 |
rrl | 1474271 | n.614A>G | non_coding_transcript_exon_variant | 0.16 |
rrl | 1474272 | n.615C>T | non_coding_transcript_exon_variant | 0.16 |
rrl | 1474275 | n.618T>G | non_coding_transcript_exon_variant | 0.88 |
rrl | 1474280 | n.623C>T | non_coding_transcript_exon_variant | 0.62 |
rrl | 1474281 | n.624A>G | non_coding_transcript_exon_variant | 0.29 |
rrl | 1474282 | n.625G>T | non_coding_transcript_exon_variant | 0.32 |
rrl | 1474310 | n.653T>G | non_coding_transcript_exon_variant | 0.76 |
rrl | 1474315 | n.658A>G | non_coding_transcript_exon_variant | 0.47 |
rrl | 1474317 | n.660G>A | non_coding_transcript_exon_variant | 0.29 |
rrl | 1474348 | n.691C>T | non_coding_transcript_exon_variant | 0.66 |
rrl | 1474351 | n.694G>T | non_coding_transcript_exon_variant | 0.95 |
rrl | 1474353 | n.696A>G | non_coding_transcript_exon_variant | 0.78 |
rrl | 1474353 | n.696A>T | non_coding_transcript_exon_variant | 0.88 |
rrl | 1474354 | n.697C>T | non_coding_transcript_exon_variant | 0.64 |
rrl | 1474355 | n.698A>G | non_coding_transcript_exon_variant | 0.36 |
rrl | 1474362 | n.705A>G | non_coding_transcript_exon_variant | 0.92 |
rrl | 1474383 | n.726G>T | non_coding_transcript_exon_variant | 0.37 |
rrl | 1474384 | n.727C>T | non_coding_transcript_exon_variant | 0.26 |
rrl | 1474387 | n.730C>T | non_coding_transcript_exon_variant | 0.95 |
rrl | 1474393 | n.736A>G | non_coding_transcript_exon_variant | 0.45 |
rrl | 1474402 | n.745T>C | non_coding_transcript_exon_variant | 0.61 |
rrl | 1474413 | n.757_776delCCCACACGCGCATACGCGCG | non_coding_transcript_exon_variant | 0.86 |
rrl | 1474437 | n.781_782delAA | non_coding_transcript_exon_variant | 0.82 |
rrl | 1474444 | n.787G>C | non_coding_transcript_exon_variant | 0.12 |
rrl | 1474448 | n.791T>C | non_coding_transcript_exon_variant | 0.74 |
rrl | 1474454 | n.797G>A | non_coding_transcript_exon_variant | 0.14 |
rrl | 1474467 | n.810A>G | non_coding_transcript_exon_variant | 0.55 |
rrl | 1474476 | n.819C>T | non_coding_transcript_exon_variant | 0.54 |
rrl | 1474488 | n.831G>T | non_coding_transcript_exon_variant | 0.97 |
rrl | 1474495 | n.838G>A | non_coding_transcript_exon_variant | 0.58 |
rrl | 1474496 | n.839C>A | non_coding_transcript_exon_variant | 0.45 |
rrl | 1474497 | n.840G>C | non_coding_transcript_exon_variant | 0.41 |
rrl | 1474498 | n.841G>T | non_coding_transcript_exon_variant | 0.49 |
rrl | 1474505 | n.848C>G | non_coding_transcript_exon_variant | 0.48 |
rrl | 1474506 | n.849C>G | non_coding_transcript_exon_variant | 0.45 |
rrl | 1474507 | n.850G>T | non_coding_transcript_exon_variant | 0.44 |
rrl | 1474508 | n.851C>T | non_coding_transcript_exon_variant | 0.55 |
rrl | 1474516 | n.859C>A | non_coding_transcript_exon_variant | 0.98 |
rrl | 1474527 | n.870T>C | non_coding_transcript_exon_variant | 0.55 |
rrl | 1474529 | n.872A>C | non_coding_transcript_exon_variant | 0.47 |
rrl | 1474530 | n.873G>A | non_coding_transcript_exon_variant | 0.42 |
rrl | 1474537 | n.880G>A | non_coding_transcript_exon_variant | 0.99 |
rrl | 1474539 | n.882C>T | non_coding_transcript_exon_variant | 0.43 |
rrl | 1474540 | n.883T>G | non_coding_transcript_exon_variant | 0.46 |
rrl | 1474542 | n.885A>G | non_coding_transcript_exon_variant | 0.57 |
rrl | 1474558 | n.901G>A | non_coding_transcript_exon_variant | 0.71 |
rrl | 1474584 | n.927C>T | non_coding_transcript_exon_variant | 0.69 |
rrl | 1474626 | n.969T>C | non_coding_transcript_exon_variant | 0.31 |
rrl | 1474627 | n.970G>A | non_coding_transcript_exon_variant | 0.49 |
rrl | 1474632 | n.975G>T | non_coding_transcript_exon_variant | 0.68 |
rrl | 1474634 | n.977T>G | non_coding_transcript_exon_variant | 0.24 |
rrl | 1474658 | n.1001A>G | non_coding_transcript_exon_variant | 0.2 |
rrl | 1474663 | n.1006C>T | non_coding_transcript_exon_variant | 0.19 |
rrl | 1474672 | n.1015C>T | non_coding_transcript_exon_variant | 0.26 |
rrl | 1474677 | n.1020A>G | non_coding_transcript_exon_variant | 0.99 |
rrl | 1474692 | n.1035G>A | non_coding_transcript_exon_variant | 0.18 |
rrl | 1474694 | n.1037C>T | non_coding_transcript_exon_variant | 0.44 |
rrl | 1474722 | n.1065T>C | non_coding_transcript_exon_variant | 0.35 |
rrl | 1474723 | n.1066G>A | non_coding_transcript_exon_variant | 0.29 |
rrl | 1474734 | n.1077G>A | non_coding_transcript_exon_variant | 0.97 |
rrl | 1474734 | n.1077G>T | non_coding_transcript_exon_variant | 0.97 |
rrl | 1474736 | n.1079C>T | non_coding_transcript_exon_variant | 0.33 |
rrl | 1474749 | n.1092C>T | non_coding_transcript_exon_variant | 0.71 |
rrl | 1474751 | n.1094G>A | non_coding_transcript_exon_variant | 0.31 |
rrl | 1474753 | n.1097delC | non_coding_transcript_exon_variant | 0.98 |
rrl | 1474760 | n.1103A>G | non_coding_transcript_exon_variant | 0.84 |
rrl | 1474777 | n.1120T>C | non_coding_transcript_exon_variant | 0.52 |
rrl | 1474779 | n.1122G>A | non_coding_transcript_exon_variant | 0.67 |
rrl | 1474780 | n.1123C>T | non_coding_transcript_exon_variant | 0.36 |
rrl | 1474782 | n.1125G>A | non_coding_transcript_exon_variant | 0.78 |
rrl | 1474783 | n.1126G>A | non_coding_transcript_exon_variant | 0.38 |
rrl | 1474794 | n.1137C>T | non_coding_transcript_exon_variant | 0.98 |
rrl | 1474801 | n.1144G>A | non_coding_transcript_exon_variant | 0.24 |
rrl | 1474802 | n.1145T>C | non_coding_transcript_exon_variant | 0.2 |
rrl | 1474823 | n.1166C>G | non_coding_transcript_exon_variant | 0.82 |
rrl | 1474824 | n.1167A>G | non_coding_transcript_exon_variant | 0.19 |
rrl | 1474827 | n.1170C>T | non_coding_transcript_exon_variant | 0.63 |
rrl | 1474830 | n.1173A>G | non_coding_transcript_exon_variant | 0.71 |
rrl | 1474830 | n.1173A>T | non_coding_transcript_exon_variant | 0.8 |
rrl | 1474831 | n.1174A>G | non_coding_transcript_exon_variant | 0.96 |
rrl | 1474831 | n.1174A>T | non_coding_transcript_exon_variant | 0.95 |
rrl | 1474832 | n.1175A>T | non_coding_transcript_exon_variant | 0.19 |
rrl | 1474864 | n.1207C>T | non_coding_transcript_exon_variant | 0.86 |
rrl | 1474883 | n.1226T>C | non_coding_transcript_exon_variant | 0.34 |
rrl | 1474901 | n.1244A>G | non_coding_transcript_exon_variant | 0.13 |
rrl | 1474903 | n.1246T>C | non_coding_transcript_exon_variant | 0.15 |
rrl | 1474904 | n.1247G>C | non_coding_transcript_exon_variant | 0.85 |
rrl | 1474913 | n.1256T>C | non_coding_transcript_exon_variant | 0.38 |
rrl | 1474932 | n.1275C>T | non_coding_transcript_exon_variant | 0.63 |
rrl | 1474946 | n.1289C>T | non_coding_transcript_exon_variant | 0.22 |
rrl | 1475031 | n.1374G>C | non_coding_transcript_exon_variant | 0.75 |
rrl | 1475059 | n.1403_1404insTA | non_coding_transcript_exon_variant | 0.86 |
rrl | 1475062 | n.1405A>T | non_coding_transcript_exon_variant | 0.86 |
rrl | 1475065 | n.1409_1411delCAA | non_coding_transcript_exon_variant | 0.86 |
rrl | 1475080 | n.1425_1426delCC | non_coding_transcript_exon_variant | 0.86 |
rrl | 1475090 | n.1433A>T | non_coding_transcript_exon_variant | 0.88 |
rrl | 1475104 | n.1447T>A | non_coding_transcript_exon_variant | 0.88 |
rrl | 1475114 | n.1457C>T | non_coding_transcript_exon_variant | 0.88 |
rrl | 1475124 | n.1467A>T | non_coding_transcript_exon_variant | 0.91 |
rrl | 1475129 | n.1472G>T | non_coding_transcript_exon_variant | 0.33 |
rrl | 1475137 | n.1480A>G | non_coding_transcript_exon_variant | 0.25 |
rrl | 1475171 | n.1514C>T | non_coding_transcript_exon_variant | 0.67 |
rrl | 1475172 | n.1515A>G | non_coding_transcript_exon_variant | 0.43 |
rrl | 1475499 | n.1842C>T | non_coding_transcript_exon_variant | 0.75 |
rrl | 1475515 | n.1858G>A | non_coding_transcript_exon_variant | 0.71 |
rrl | 1475526 | n.1869C>A | non_coding_transcript_exon_variant | 0.83 |
rrl | 1475531 | n.1874C>T | non_coding_transcript_exon_variant | 0.71 |
rrl | 1475538 | n.1881T>A | non_coding_transcript_exon_variant | 0.71 |
rrl | 1475539 | n.1882A>T | non_coding_transcript_exon_variant | 0.86 |
rrl | 1475545 | n.1888T>G | non_coding_transcript_exon_variant | 0.86 |
rrl | 1475548 | n.1891C>T | non_coding_transcript_exon_variant | 0.75 |
rrl | 1475549 | n.1892T>C | non_coding_transcript_exon_variant | 0.75 |
rrl | 1475649 | n.1992A>G | non_coding_transcript_exon_variant | 0.5 |
rrl | 1475655 | n.1998T>G | non_coding_transcript_exon_variant | 0.5 |
rrl | 1475657 | n.2000A>G | non_coding_transcript_exon_variant | 0.38 |
rrl | 1475659 | n.2002G>A | non_coding_transcript_exon_variant | 0.67 |
rrl | 1475672 | n.2015C>T | non_coding_transcript_exon_variant | 0.47 |
rrl | 1475673 | n.2016T>C | non_coding_transcript_exon_variant | 0.57 |
rrl | 1475686 | n.2029C>G | non_coding_transcript_exon_variant | 0.16 |
rrl | 1475696 | n.2039T>C | non_coding_transcript_exon_variant | 0.31 |
rrl | 1475699 | n.2042C>T | non_coding_transcript_exon_variant | 0.93 |
rrl | 1475703 | n.2046A>G | non_coding_transcript_exon_variant | 0.31 |
rrl | 1475707 | n.2050T>G | non_coding_transcript_exon_variant | 0.21 |
rrl | 1475715 | n.2058G>C | non_coding_transcript_exon_variant | 0.19 |
rrl | 1475722 | n.2065G>T | non_coding_transcript_exon_variant | 0.66 |
rrl | 1475751 | n.2094C>A | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475751 | n.2094C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475752 | n.2095C>T | non_coding_transcript_exon_variant | 0.63 |
rrl | 1475753 | n.2096C>G | non_coding_transcript_exon_variant | 0.65 |
rrl | 1475754 | n.2097G>A | non_coding_transcript_exon_variant | 0.15 |
rrl | 1475756 | n.2099T>C | non_coding_transcript_exon_variant | 0.31 |
rrl | 1475765 | n.2108A>G | non_coding_transcript_exon_variant | 0.94 |
rrl | 1475765 | n.2108A>T | non_coding_transcript_exon_variant | 0.98 |
rrl | 1475769 | n.2112T>C | non_coding_transcript_exon_variant | 0.77 |
rrl | 1475774 | n.2117C>T | non_coding_transcript_exon_variant | 0.16 |
rrl | 1475775 | n.2118G>T | non_coding_transcript_exon_variant | 0.63 |
rrl | 1475777 | n.2120A>T | non_coding_transcript_exon_variant | 0.38 |
rrl | 1475869 | n.2212C>A | non_coding_transcript_exon_variant | 0.65 |
rrl | 1475881 | n.2224T>C | non_coding_transcript_exon_variant | 0.81 |
rrl | 1475883 | n.2226A>C | non_coding_transcript_exon_variant | 0.98 |
rrl | 1475883 | n.2226A>T | non_coding_transcript_exon_variant | 0.99 |
rrl | 1475884 | n.2227A>G | non_coding_transcript_exon_variant | 0.28 |
rrl | 1475896 | n.2239A>G | non_coding_transcript_exon_variant | 0.15 |
rrl | 1475898 | n.2241A>G | non_coding_transcript_exon_variant | 0.99 |
rrl | 1475899 | n.2242G>A | non_coding_transcript_exon_variant | 0.99 |
rrl | 1475906 | n.2249C>T | non_coding_transcript_exon_variant | 0.37 |
rrl | 1475916 | n.2259C>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475937 | n.2280A>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475943 | n.2286G>A | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475945 | n.2288C>A | non_coding_transcript_exon_variant | 0.23 |
rrl | 1475952 | n.2295A>G | non_coding_transcript_exon_variant | 0.99 |
rrl | 1475963 | n.2306G>T | non_coding_transcript_exon_variant | 0.78 |
rrl | 1475970 | n.2313C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475975 | n.2318C>T | non_coding_transcript_exon_variant | 0.95 |
rrl | 1475977 | n.2320A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475978 | n.2321C>T | non_coding_transcript_exon_variant | 0.81 |
rrl | 1475988 | n.2331A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475993 | n.2336C>T | non_coding_transcript_exon_variant | 0.89 |
rrl | 1475996 | n.2339T>G | non_coding_transcript_exon_variant | 0.27 |
rrl | 1475997 | n.2340A>T | non_coding_transcript_exon_variant | 0.99 |
rrl | 1475998 | n.2341C>T | non_coding_transcript_exon_variant | 0.99 |
rrl | 1476001 | n.2344T>C | non_coding_transcript_exon_variant | 0.99 |
rrl | 1476030 | n.2373A>G | non_coding_transcript_exon_variant | 0.98 |
rrl | 1476032 | n.2375C>A | non_coding_transcript_exon_variant | 0.55 |
rrl | 1476033 | n.2376T>G | non_coding_transcript_exon_variant | 0.4 |
rrl | 1476034 | n.2377C>G | non_coding_transcript_exon_variant | 0.59 |
rrl | 1476035 | n.2378G>T | non_coding_transcript_exon_variant | 0.33 |
rrl | 1476040 | n.2383C>T | non_coding_transcript_exon_variant | 0.81 |
rrl | 1476044 | n.2387T>G | non_coding_transcript_exon_variant | 0.34 |
rrl | 1476045 | n.2388G>T | non_coding_transcript_exon_variant | 0.55 |
rrl | 1476046 | n.2389G>T | non_coding_transcript_exon_variant | 0.36 |
rrl | 1476047 | n.2390G>T | non_coding_transcript_exon_variant | 0.55 |
rrl | 1476049 | n.2392C>T | non_coding_transcript_exon_variant | 0.95 |
rrl | 1476113 | n.2456T>G | non_coding_transcript_exon_variant | 0.55 |
rrl | 1476115 | n.2458T>C | non_coding_transcript_exon_variant | 0.54 |
rrl | 1476116 | n.2459A>G | non_coding_transcript_exon_variant | 0.14 |
rrl | 1476130 | n.2473G>A | non_coding_transcript_exon_variant | 0.62 |
rrl | 1476131 | n.2474C>T | non_coding_transcript_exon_variant | 0.97 |
rrl | 1476141 | n.2484A>G | non_coding_transcript_exon_variant | 0.13 |
rrl | 1476153 | n.2496T>C | non_coding_transcript_exon_variant | 0.17 |
rrl | 1476164 | n.2507A>G | non_coding_transcript_exon_variant | 0.77 |
rrl | 1476179 | n.2522C>T | non_coding_transcript_exon_variant | 0.21 |
rrl | 1476194 | n.2537A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476200 | n.2543A>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476201 | n.2544C>T | non_coding_transcript_exon_variant | 0.92 |
rrl | 1476214 | n.2557G>T | non_coding_transcript_exon_variant | 0.91 |
rrl | 1476215 | n.2558C>T | non_coding_transcript_exon_variant | 0.92 |
rrl | 1476224 | n.2567A>G | non_coding_transcript_exon_variant | 0.78 |
rrl | 1476225 | n.2568T>G | non_coding_transcript_exon_variant | 0.22 |
rrl | 1476227 | n.2570C>T | non_coding_transcript_exon_variant | 0.16 |
rrl | 1476245 | n.2588C>T | non_coding_transcript_exon_variant | 0.61 |
rrl | 1476250 | n.2593C>G | non_coding_transcript_exon_variant | 0.5 |
rrl | 1476251 | n.2594T>C | non_coding_transcript_exon_variant | 0.44 |
rrl | 1476252 | n.2595T>G | non_coding_transcript_exon_variant | 0.63 |
rrl | 1476253 | n.2596A>G | non_coding_transcript_exon_variant | 0.55 |
rrl | 1476255 | n.2598A>G | non_coding_transcript_exon_variant | 0.22 |
rrl | 1476256 | n.2599A>G | non_coding_transcript_exon_variant | 0.37 |
rrl | 1476257 | n.2600G>C | non_coding_transcript_exon_variant | 0.51 |
rrl | 1476260 | n.2603A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476280 | n.2623A>C | non_coding_transcript_exon_variant | 0.42 |
rrl | 1476281 | n.2624T>C | non_coding_transcript_exon_variant | 0.57 |
rrl | 1476293 | n.2636C>T | non_coding_transcript_exon_variant | 0.42 |
rrl | 1476294 | n.2637A>G | non_coding_transcript_exon_variant | 0.71 |
rrl | 1476295 | n.2638C>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476296 | n.2639C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476297 | n.2640C>G | non_coding_transcript_exon_variant | 0.95 |
rrl | 1476297 | n.2640C>T | non_coding_transcript_exon_variant | 0.97 |
rrl | 1476298 | n.2641C>G | non_coding_transcript_exon_variant | 0.27 |
rrl | 1476299 | n.2642C>G | non_coding_transcript_exon_variant | 0.27 |
rrl | 1476300 | n.2643G>T | non_coding_transcript_exon_variant | 0.54 |
rrl | 1476301 | n.2644A>T | non_coding_transcript_exon_variant | 0.99 |
rrl | 1476302 | n.2645G>A | non_coding_transcript_exon_variant | 0.43 |
rrl | 1476308 | n.2651G>C | non_coding_transcript_exon_variant | 0.28 |
rrl | 1476309 | n.2652G>C | non_coding_transcript_exon_variant | 0.27 |
rrl | 1476311 | n.2654G>C | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476312 | n.2655T>C | non_coding_transcript_exon_variant | 0.71 |
rrl | 1476313 | n.2656G>A | non_coding_transcript_exon_variant | 0.41 |
rrl | 1476332 | n.2675G>C | non_coding_transcript_exon_variant | 0.5 |
rrl | 1476337 | n.2680C>T | non_coding_transcript_exon_variant | 0.43 |
rrl | 1476338 | n.2681C>T | non_coding_transcript_exon_variant | 0.52 |
rrl | 1476353 | n.2696G>T | non_coding_transcript_exon_variant | 0.58 |
rrl | 1476358 | n.2701T>C | non_coding_transcript_exon_variant | 0.61 |
rrl | 1476359 | n.2702C>G | non_coding_transcript_exon_variant | 0.38 |
rrl | 1476369 | n.2712C>T | non_coding_transcript_exon_variant | 0.37 |
rrl | 1476372 | n.2715T>C | non_coding_transcript_exon_variant | 0.59 |
rrl | 1476381 | n.2724G>C | non_coding_transcript_exon_variant | 0.4 |
rrl | 1476382 | n.2725A>G | non_coding_transcript_exon_variant | 0.58 |
rrl | 1476383 | n.2726T>A | non_coding_transcript_exon_variant | 0.58 |
rrl | 1476408 | n.2751G>A | non_coding_transcript_exon_variant | 0.28 |
rrl | 1476425 | n.2768G>T | non_coding_transcript_exon_variant | 0.54 |
rrl | 1476428 | n.2771C>T | non_coding_transcript_exon_variant | 0.95 |
rrl | 1476429 | n.2772A>C | non_coding_transcript_exon_variant | 0.93 |
rrl | 1476466 | n.2809C>T | non_coding_transcript_exon_variant | 0.72 |
rrl | 1476481 | n.2824T>C | non_coding_transcript_exon_variant | 0.94 |
rrl | 1476506 | n.2849T>C | non_coding_transcript_exon_variant | 0.98 |
rrl | 1476513 | n.2856G>T | non_coding_transcript_exon_variant | 0.18 |
rrl | 1476514 | n.2857C>T | non_coding_transcript_exon_variant | 0.31 |
rrl | 1476515 | n.2858C>T | non_coding_transcript_exon_variant | 0.67 |
rrl | 1476517 | n.2860C>T | non_coding_transcript_exon_variant | 0.15 |
rrl | 1476519 | n.2862C>G | non_coding_transcript_exon_variant | 0.28 |
rrl | 1476523 | n.2866T>C | non_coding_transcript_exon_variant | 0.21 |
rrl | 1476524 | n.2867C>A | non_coding_transcript_exon_variant | 0.92 |
rrl | 1476524 | n.2867C>T | non_coding_transcript_exon_variant | 0.95 |
rrl | 1476525 | n.2868A>G | non_coding_transcript_exon_variant | 0.97 |
rrl | 1476528 | n.2871A>G | non_coding_transcript_exon_variant | 0.3 |
rrl | 1476530 | n.2873C>T | non_coding_transcript_exon_variant | 0.66 |
rrl | 1476536 | n.2879G>A | non_coding_transcript_exon_variant | 0.95 |
rrl | 1476537 | n.2880A>G | non_coding_transcript_exon_variant | 0.16 |
rrl | 1476538 | n.2881A>G | non_coding_transcript_exon_variant | 0.41 |
rrl | 1476539 | n.2882A>G | non_coding_transcript_exon_variant | 0.79 |
rrl | 1476540 | n.2883C>G | non_coding_transcript_exon_variant | 0.78 |
rrl | 1476547 | n.2890C>T | non_coding_transcript_exon_variant | 0.69 |
rrl | 1476567 | n.2910C>T | non_coding_transcript_exon_variant | 0.3 |
rrl | 1476583 | n.2926G>A | non_coding_transcript_exon_variant | 0.26 |
rrl | 1476584 | n.2927C>T | non_coding_transcript_exon_variant | 0.74 |
rrl | 1476585 | n.2928A>G | non_coding_transcript_exon_variant | 0.52 |
rrl | 1476594 | n.2937C>A | non_coding_transcript_exon_variant | 0.27 |
rrl | 1476600 | n.2943A>C | non_coding_transcript_exon_variant | 0.38 |
rrl | 1476603 | n.2946G>T | non_coding_transcript_exon_variant | 0.29 |
rrl | 1476607 | n.2950C>T | non_coding_transcript_exon_variant | 0.28 |
rrl | 1476608 | n.2951C>G | non_coding_transcript_exon_variant | 0.61 |
rrl | 1476613 | n.2956G>A | non_coding_transcript_exon_variant | 0.22 |
rrl | 1476614 | n.2957A>T | non_coding_transcript_exon_variant | 0.61 |
rrl | 1476616 | n.2959A>G | non_coding_transcript_exon_variant | 0.61 |
rrl | 1476619 | n.2962C>T | non_coding_transcript_exon_variant | 0.61 |
rrl | 1476628 | n.2971T>G | non_coding_transcript_exon_variant | 0.62 |
rrl | 1476629 | n.2972C>A | non_coding_transcript_exon_variant | 0.62 |
rrl | 1476630 | n.2973A>G | non_coding_transcript_exon_variant | 0.25 |
rrl | 1476633 | n.2976A>G | non_coding_transcript_exon_variant | 0.31 |
rrl | 1476664 | n.3007T>A | non_coding_transcript_exon_variant | 0.18 |
rrl | 1476668 | n.3011C>T | non_coding_transcript_exon_variant | 0.18 |
rpsA | 1833661 | c.120A>G | synonymous_variant | 0.2 |
rpsA | 1833667 | c.126C>T | synonymous_variant | 0.21 |
rpsA | 1833668 | p.Ile43Val | missense_variant | 0.21 |
rpsA | 1833676 | c.135A>G | synonymous_variant | 0.24 |
rpsA | 1833679 | c.138G>C | synonymous_variant | 0.23 |
rpsA | 1833685 | c.144G>T | synonymous_variant | 0.17 |
rpsA | 1833688 | c.147C>T | synonymous_variant | 0.17 |
rpsA | 1833694 | c.153G>C | synonymous_variant | 0.2 |
rpsA | 1833727 | c.186G>C | synonymous_variant | 0.23 |
rpsA | 1833732 | p.Pro64Leu | missense_variant | 0.21 |
rpsA | 1833736 | c.195C>T | synonymous_variant | 0.22 |
rpsA | 1833742 | c.201A>G | synonymous_variant | 0.22 |
rpsA | 1833770 | p.Asn77Asp | missense_variant | 0.17 |
rpsA | 1833781 | c.240T>C | synonymous_variant | 0.13 |
rpsA | 1833874 | c.333T>C | synonymous_variant | 0.3 |
rpsA | 1833905 | p.Lys122Glu | missense_variant | 0.32 |
rpsA | 1833912 | p.Glu124Gly | missense_variant | 0.3 |
rpsA | 1833915 | p.Ala125Val | missense_variant | 0.3 |
rpsA | 1833921 | p.Lys127Thr | missense_variant | 0.32 |
rpsA | 1833926 | p.Thr129Ser | missense_variant | 0.32 |
rpsA | 1833940 | c.399C>T | synonymous_variant | 0.22 |
rpsA | 1833949 | c.408T>C | synonymous_variant | 0.27 |
rpsA | 1833952 | c.411C>T | synonymous_variant | 0.19 |
rpsA | 1833955 | c.414G>T | synonymous_variant | 0.33 |
rpsA | 1833961 | c.420C>G | synonymous_variant | 0.21 |
rpsA | 1833970 | c.429G>C | synonymous_variant | 0.44 |
rpsA | 1833976 | c.435C>T | synonymous_variant | 0.5 |
rpsA | 1833979 | c.438T>C | synonymous_variant | 0.59 |
rpsA | 1833991 | c.450C>A | synonymous_variant | 0.28 |
rpsA | 1833994 | c.453G>C | synonymous_variant | 0.58 |
rpsA | 1833997 | c.456G>C | synonymous_variant | 0.33 |
rpsA | 1834000 | c.459G>T | synonymous_variant | 0.23 |
rpsA | 1834009 | c.468C>T | synonymous_variant | 0.33 |
rpsA | 1834012 | c.471G>C | synonymous_variant | 0.53 |
rpsA | 1834015 | c.474G>C | synonymous_variant | 0.38 |
rpsA | 1834024 | c.483G>C | synonymous_variant | 0.26 |
rpsA | 1834026 | c.486delG | frameshift_variant | 0.23 |
rpsA | 1834030 | c.489C>T | synonymous_variant | 0.21 |
rpsA | 1834034 | p.Ile165Val | missense_variant | 0.14 |
rpsA | 1834039 | c.498C>T | synonymous_variant | 0.31 |
rpsA | 1834040 | p.Lys167Arg | missense_variant | 0.5 |
rpsA | 1834043 | p.Glu168Gln | missense_variant | 0.21 |
rpsA | 1834051 | c.510G>A | synonymous_variant | 0.32 |
rpsA | 1834054 | c.513C>G | synonymous_variant | 0.33 |
rpsA | 1834063 | c.522C>T | synonymous_variant | 0.15 |
rpsA | 1834069 | c.528G>C | synonymous_variant | 0.15 |
rpsA | 1834093 | c.552G>C | synonymous_variant | 0.29 |
rpsA | 1834096 | c.555G>C | synonymous_variant | 0.14 |
rpsA | 1834102 | c.561T>C | synonymous_variant | 0.21 |
rpsA | 1834246 | c.705G>C | synonymous_variant | 0.18 |
rpsA | 1834249 | c.708T>C | synonymous_variant | 0.27 |
rpsA | 1834261 | c.720A>G | synonymous_variant | 0.45 |
rpsA | 1834264 | c.723G>C | synonymous_variant | 0.48 |
rpsA | 1834285 | c.744G>C | synonymous_variant | 0.34 |
rpsA | 1834294 | c.753G>C | synonymous_variant | 0.43 |
rpsA | 1834298 | p.Gln253Glu | missense_variant | 0.43 |
rpsA | 1834303 | c.762T>C | synonymous_variant | 0.29 |
rpsA | 1834306 | c.765T>C | synonymous_variant | 0.35 |
rpsA | 1834307 | p.Asp256Asn | missense_variant | 0.32 |
rpsA | 1834318 | c.777C>G | synonymous_variant | 0.28 |
rpsA | 1834327 | c.786G>C | synonymous_variant | 0.3 |
rpsA | 1834330 | c.789C>G | synonymous_variant | 0.27 |
rpsA | 1834340 | p.Met267Phe | missense_variant | 0.27 |
rpsA | 1834348 | c.807T>C | synonymous_variant | 0.32 |
rpsA | 1834354 | c.813G>C | synonymous_variant | 0.32 |
rpsA | 1834357 | c.816T>C | synonymous_variant | 0.32 |
rpsA | 1834360 | c.819G>C | synonymous_variant | 0.32 |
rpsA | 1834361 | c.820T>C | synonymous_variant | 0.31 |
rpsA | 1834366 | c.825A>G | synonymous_variant | 0.3 |
rpsA | 1834378 | c.837T>C | synonymous_variant | 0.31 |
rpsA | 1834384 | c.843A>G | synonymous_variant | 0.24 |
rpsA | 1834411 | c.870T>C | synonymous_variant | 0.19 |
rpsA | 1834417 | c.876G>C | synonymous_variant | 0.15 |
rpsA | 1834474 | c.933C>G | synonymous_variant | 0.13 |
rpsA | 1834486 | p.Glu315Asp | missense_variant | 0.19 |
rpsA | 1834489 | c.948T>C | synonymous_variant | 0.25 |
rpsA | 1834504 | c.963G>C | synonymous_variant | 0.35 |
rpsA | 1834522 | c.981C>G | synonymous_variant | 0.36 |
rpsA | 1834523 | p.Glu328Gln | missense_variant | 0.36 |
rpsA | 1834528 | c.987T>G | synonymous_variant | 0.36 |
rpsA | 1834540 | c.999G>C | synonymous_variant | 0.36 |
rpsA | 1834546 | p.Asp335Glu | missense_variant | 0.33 |
rpsA | 1834552 | c.1013_1015delTTG | disruptive_inframe_deletion | 0.25 |
rpsA | 1834558 | c.1017_1018insAAG | conservative_inframe_insertion | 0.27 |
rpsA | 1834570 | p.Asp343Glu | missense_variant | 0.33 |
rpsA | 1834572 | p.Ala344Val | missense_variant | 0.23 |
rpsA | 1834574 | p.Met345Phe | missense_variant | 0.23 |
rpsA | 1834612 | c.1071G>C | synonymous_variant | 0.13 |
rpsA | 1834618 | c.1077G>C | synonymous_variant | 0.14 |
rpsA | 1834619 | c.1078T>C | synonymous_variant | 0.14 |
tlyA | 1917972 | c.33A>G | synonymous_variant | 1.0 |
Rv1979c | 2223293 | c.-129A>G | upstream_gene_variant | 1.0 |
kasA | 2517991 | c.-124T>A | upstream_gene_variant | 0.14 |
ahpC | 2726408 | c.216T>C | synonymous_variant | 0.12 |
folC | 2747392 | c.207C>T | synonymous_variant | 1.0 |
pepQ | 2860159 | p.Ala87Gly | missense_variant | 0.17 |
fbiD | 3339734 | p.Ala206Gly | missense_variant | 0.67 |
Rv3236c | 3612059 | p.Ala353Asp | missense_variant | 0.2 |
Rv3236c | 3612872 | p.Phe82Ser | missense_variant | 0.12 |
Rv3236c | 3612998 | p.Gly40Val | missense_variant | 1.0 |
rpoA | 3878295 | c.213A>G | synonymous_variant | 0.25 |
rpoA | 3878298 | p.Lys70Thr | missense_variant | 0.25 |
rpoA | 3878304 | c.204G>A | synonymous_variant | 0.25 |
rpoA | 3878310 | c.198G>T | synonymous_variant | 0.27 |
rpoA | 3878313 | c.195G>T | synonymous_variant | 0.25 |
rpoA | 3878317 | p.Thr64Ser | missense_variant | 0.23 |
rpoA | 3878322 | c.186A>G | synonymous_variant | 0.23 |
rpoA | 3878331 | c.177A>T | synonymous_variant | 0.25 |
rpoA | 3878337 | c.171T>C | synonymous_variant | 0.25 |
rpoA | 3878343 | c.165C>T | synonymous_variant | 0.23 |
rpoA | 3878348 | p.Ile54Val | missense_variant | 0.23 |
rpoA | 3878355 | c.153C>T | synonymous_variant | 0.23 |
rpoA | 3878361 | c.147G>C | synonymous_variant | 0.2 |
rpoA | 3878364 | c.144A>C | synonymous_variant | 0.19 |
rpoA | 3878373 | c.135G>C | synonymous_variant | 0.17 |
rpoA | 3878376 | c.132G>C | synonymous_variant | 0.17 |
rpoA | 3878394 | c.114G>C | synonymous_variant | 0.18 |
rpoA | 3878397 | c.111G>C | synonymous_variant | 0.19 |
rpoA | 3878400 | c.108T>C | synonymous_variant | 0.19 |
rpoA | 3878403 | c.105C>T | synonymous_variant | 0.19 |
rpoA | 3878408 | p.Leu34Met | missense_variant | 0.18 |
clpC1 | 4038860 | c.1845G>C | synonymous_variant | 0.15 |
clpC1 | 4038875 | c.1830C>G | synonymous_variant | 0.16 |
clpC1 | 4038878 | c.1827A>G | synonymous_variant | 0.17 |
clpC1 | 4039610 | c.1095G>C | synonymous_variant | 0.22 |
clpC1 | 4039694 | c.1011G>C | synonymous_variant | 0.32 |
clpC1 | 4039714 | p.Tyr331His | missense_variant | 0.25 |
clpC1 | 4039724 | c.981A>G | synonymous_variant | 0.25 |
clpC1 | 4039730 | c.975C>G | synonymous_variant | 0.24 |
clpC1 | 4039733 | c.972G>C | synonymous_variant | 0.18 |
clpC1 | 4039769 | c.936C>G | synonymous_variant | 0.17 |
clpC1 | 4039773 | p.Lys311Met | missense_variant | 0.18 |
clpC1 | 4039787 | c.918G>C | synonymous_variant | 0.2 |
clpC1 | 4039793 | c.912C>T | synonymous_variant | 0.21 |
clpC1 | 4039817 | c.888A>T | synonymous_variant | 0.21 |
clpC1 | 4039820 | c.885T>C | synonymous_variant | 0.18 |
clpC1 | 4039829 | c.874_876delTTGinsCTT | synonymous_variant | 0.16 |
clpC1 | 4039838 | p.Leu289Ile | missense_variant | 0.16 |
clpC1 | 4039850 | c.855T>C | synonymous_variant | 0.14 |
clpC1 | 4039865 | c.840T>C | synonymous_variant | 0.13 |
clpC1 | 4039875 | p.Asn277Arg | missense_variant | 0.14 |
clpC1 | 4039883 | c.822G>A | synonymous_variant | 0.18 |
clpC1 | 4040024 | c.681A>G | synonymous_variant | 0.17 |
clpC1 | 4040033 | c.672G>C | synonymous_variant | 0.24 |
clpC1 | 4040042 | c.663C>T | synonymous_variant | 0.14 |
clpC1 | 4040057 | c.648C>T | synonymous_variant | 0.16 |
clpC1 | 4040063 | c.642G>C | synonymous_variant | 0.13 |
clpC1 | 4040069 | c.636G>C | synonymous_variant | 0.18 |
clpC1 | 4040084 | c.621C>T | synonymous_variant | 0.15 |
clpC1 | 4040087 | c.618G>C | synonymous_variant | 0.15 |
clpC1 | 4040090 | c.615T>C | synonymous_variant | 0.29 |
clpC1 | 4040096 | c.609G>C | synonymous_variant | 0.29 |
clpC1 | 4040108 | p.Arg199Ser | missense_variant | 0.17 |
clpC1 | 4040111 | c.594G>A | synonymous_variant | 0.19 |
clpC1 | 4040114 | p.Ile197Met | missense_variant | 0.33 |
clpC1 | 4040117 | c.588A>G | synonymous_variant | 0.32 |
clpC1 | 4040123 | p.Glu194His | missense_variant | 0.18 |
clpC1 | 4040147 | p.Lys186Glu | missense_variant | 0.24 |
embA | 4242643 | c.-590C>T | upstream_gene_variant | 1.0 |
embB | 4246527 | p.Ala5Gly | missense_variant | 0.29 |
embB | 4248324 | p.Ala604Gly | missense_variant | 0.25 |
whiB6 | 4338595 | c.-75delG | upstream_gene_variant | 1.0 |
Rv3083 | 3448507 | c.5_*1408del | frameshift_variant&stop_lost&splice_region_variant | 1.0 |