ERR2026698
|
HR-TB
|
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
|
None
|
SRR1181403
|
Other
|
lineage4.9
|
None
|
ERR2228910
|
Other
|
lineage4.8
|
None
|
ERR978746_ERR978747_ERR978748
|
RR-TB
|
lineage4.8
|
None
|
ERR2513382
|
RR-TB
|
lineage4.1.1.3
|
None
|
ERR4819357
|
Sensitive
|
lineage4.9
|
None
|
SRR10315558
|
Sensitive
|
lineage2.2.1
|
None
|
SRR1181215
|
Sensitive
|
lineage4.4.1.1.1
|
None
|
ERR161034
|
HR-TB
|
lineage4.3.4.2.1
|
None
|
SRR1180375
|
Sensitive
|
lineage4.9
|
None
|
SRR1180300
|
Sensitive
|
lineage4.9
|
None
|
SRR19303820
|
RR-TB
|
lineage4.8
|
None
|
ERR4822138
|
Other
|
lineage4.1.2.1
|
None
|
ERR2026695
|
MDR-TB
|
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3
|
None
|
SRR6045191
|
Sensitive
|
lineage4.9
|
None
|
SRR9970980
|
HR-TB
|
lineage4.1.2
|
None
|
ERR702405
|
Sensitive
|
lineage4.9
|
None
|
SAMEA3501015
|
Other
|
lineage4.8
|
None
|
ERR2026697
|
HR-TB
|
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
|
None
|
SRR5341341
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR3275709
|
HR-TB
|
lineage3
|
nl
|
SRR1184021
|
Sensitive
|
lineage4.9
|
None
|
SRR5341300
|
HR-TB
|
lineage4.9
|
None
|
ERR108125
|
RR-TB
|
lineage4.9
|
None
|
ERR978761_ERR978762_ERR978760
|
RR-TB
|
lineage4.8
|
None
|
ERR4831616
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4814734
|
Other
|
lineage1.2.1.1
|
None
|
SRR18003047
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR978760
|
RR-TB
|
lineage4.8
|
None
|
SRR18003046
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6511621
|
Sensitive
|
lineage4.9
|
None
|
SRR20969542
|
Other
|
lineage4.4.2
|
None
|
ERR3273109
|
HR-TB
|
lineage4
|
None
|
ERR2514430
|
Other
|
lineage3.1.2;lineage4.1.1.3.1
|
None
|
SRR11342698
|
RR-TB
|
lineage4.4.1.1
|
None
|
ERR4596910
|
Sensitive
|
lineage4.9
|
None
|
ERR245794
|
HR-TB
|
lineage4.3.4.2.1
|
None
|
ERR6866639
|
Other
|
lineage4.9
|
None
|
SRR5341308
|
Sensitive
|
lineage4.9
|
None
|
SRR1180399
|
Sensitive
|
lineage4.9
|
None
|
ERR978726_ERR978727
|
RR-TB
|
lineage4.8
|
None
|
SRR6045892
|
Sensitive
|
lineage4.9
|
None
|
SRR1181390
|
Sensitive
|
lineage2.2.1;lineage4.9
|
None
|
ERR2513121
|
Sensitive
|
lineage3.1.3
|
None
|
SAMEA3501067
|
RR-TB
|
lineage4.8
|
None
|
ERR212001
|
HR-TB
|
|
None
|
ERR6866022
|
Other
|
lineage4.8;lineage4.9
|
None
|
SRR11349145
|
Pre-XDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR3675510
|
Sensitive
|
La3;lineage4.9
|
None
|
ERR4796254
|
Sensitive
|
lineage4.9
|
None
|
ERR4815471
|
Sensitive
|
lineage4.9
|
None
|
SRR1181325
|
Sensitive
|
lineage4.9
|
None
|
ERR137286
|
Other
|
lineage4.9
|
None
|
ERR6866547
|
Other
|
La1.7;lineage4.9;lineage6
|
None
|
ERR4808964
|
RR-TB
|
lineage2.2.1
|
None
|
ERR4769417
|
Pre-XDR-TB
|
lineage4.9
|
None
|
ERR4810624
|
MDR-TB
|
lineage2.2
|
None
|
SRR18003004
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR2514327
|
HR-TB
|
lineage4.8
|
None
|
ERR867524
|
Pre-XDR-TB
|
lineage4.2.1
|
None
|
SRR1180946
|
Sensitive
|
lineage2;lineage4.9
|
None
|
ERR4769554
|
RR-TB
|
lineage4.9
|
None
|
ERR245758
|
Other
|
lineage4.9.1
|
None
|
ERR978726
|
RR-TB
|
lineage4.8
|
None
|
SRR5341455
|
Sensitive
|
lineage4.9
|
None
|
SRR1791747
|
Other
|
La1.8.1
|
None
|
SRR5341310
|
Other
|
lineage1.1.2
|
None
|
SRR11342687
|
RR-TB
|
lineage4.2.2.2
|
None
|
ERR6866410
|
Sensitive
|
lineage4.9
|
None
|
ERR978752
|
Other
|
lineage4.8
|
None
|
SRR1181237
|
Sensitive
|
lineage2.2.1;lineage4
|
None
|
ERR736837
|
Pre-XDR-TB
|
lineage4.9
|
None
|
ERR4831617
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR11342642
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR323115
|
Sensitive
|
lineage4.9
|
None
|
SRR5341425
|
Other
|
lineage4.9
|
None
|
ERR4798099
|
Other
|
lineage4.9
|
None
|
ERR4769508
|
RR-TB
|
lineage4.9
|
None
|
SRR26399491
|
Sensitive
|
lineage1.1.1.1
|
None
|
ERR6359066
|
HR-TB
|
lineage4.9
|
None
|
SRR3675235
|
Sensitive
|
lineage4.9
|
None
|
SRR1175487
|
Sensitive
|
lineage4.9
|
None
|
ERR4816964
|
Sensitive
|
lineage4.9
|
None
|
ERR9787256
|
Other
|
lineage6.1.3
|
None
|
SRR18910194
|
HR-TB
|
lineage2.2.2
|
None
|
SRR18002984
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR5341384
|
HR-TB
|
lineage4.9
|
None
|
ERR502510
|
Sensitive
|
lineage4.9
|
None
|
SRR5818647
|
Other
|
lineage4.3.4.2.1
|
None
|
ERR1063883
|
HR-TB
|
lineage4.9
|
None
|
SRR1180420
|
Sensitive
|
lineage4.9
|
None
|
ERR4821655
|
HR-TB
|
lineage4.9
|
None
|
SRR14801749
|
HR-TB
|
lineage4.9
|
None
|
ERR405219
|
HR-TB
|
La1.7;lineage3.1;lineage4
|
None
|
SRR10315567
|
HR-TB
|
lineage2.2.1
|
None
|
ERR2228890
|
Other
|
lineage4.8;lineage4.9
|
None
|
ERR2512423
|
Other
|
lineage4.1.1.3
|
None
|
SRR7496471
|
Sensitive
|
lineage4
|
None
|
SRR5341461
|
HR-TB
|
lineage4.9
|
None
|
ERR4811035
|
Pre-XDR-TB
|
lineage2.2.1;lineage4.5
|
None
|
SRR9970981
|
RR-TB
|
lineage4.3.2.1
|
None
|
SRR6789624
|
HR-TB
|
lineage4.1.1.3
|
None
|
SRR1180319
|
Sensitive
|
lineage4.9
|
None
|
SRR28859661
|
Sensitive
|
lineage2.2.1
|
None
|
SRR5341453
|
Other
|
lineage4.9
|
None
|
ERR1035122
|
Sensitive
|
lineage4.9
|
None
|
SRR6046250
|
Other
|
lineage4.9
|
None
|
ERR8479578
|
Sensitive
|
lineage1.1.3.1
|
None
|
SRR7236330
|
Other
|
La1.8.1
|
None
|
SRR1175512
|
Sensitive
|
lineage4.9
|
None
|
SRR14801652
|
HR-TB
|
lineage4.3.3
|
None
|
SRR29050859
|
Other
|
lineage4.9
|
None
|
ERR978735
|
Other
|
lineage4.8
|
None
|
SRR5341467
|
Other
|
lineage4.9
|
None
|
ERR779852
|
Sensitive
|
lineage4.9
|
None
|
SRR1180413
|
Sensitive
|
lineage4.9
|
None
|
ERR11465511
|
Other
|
lineage4.3.4.2.1
|
None
|
SRR3675585
|
Sensitive
|
lineage4.9
|
None
|
SRR9971112
|
Other
|
lineage2.2.1
|
None
|
ERR1023502
|
MDR-TB
|
lineage2;lineage4
|
None
|
SRR1238558
|
Other
|
lineage4.9
|
None
|
SRR29097066
|
Sensitive
|
lineage4.9
|
None
|
ERR4024991
|
Other
|
lineage4.8;lineage4.9
|
None
|
ERR4831621
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR1183965
|
Sensitive
|
lineage4.9
|
None
|
ERR11252558
|
Other
|
lineage4.6.3;lineage4.9
|
None
|
SRR5341387
|
Other
|
lineage4.9
|
None
|
ERR978757
|
RR-TB
|
lineage4.8
|
None
|
ERR6359045
|
Other
|
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3
|
None
|
ERR405209
|
Sensitive
|
La1.7;lineage4.9
|
None
|
SRR18003024
|
RR-TB
|
lineage2.2.1
|
None
|
ERR11465714
|
Other
|
lineage1.2.2.1;lineage4.4.1.1
|
None
|
SRR1180355
|
Sensitive
|
lineage4.9
|
None
|
SRR1181256
|
Other
|
lineage4.9
|
None
|
ERR4797474
|
Sensitive
|
lineage4.9
|
None
|
SRR7496523
|
Other
|
lineage4.7
|
None
|
SRR1180312
|
Sensitive
|
lineage4.9
|
None
|
ERR4769530
|
RR-TB
|
lineage4.9
|
None
|
SRR6046385
|
Sensitive
|
lineage4.9
|
None
|
SRR6045795
|
Sensitive
|
lineage2.2.1
|
None
|
SRR1175513
|
Sensitive
|
lineage4.9
|
None
|
ERR4831618
|
MDR-TB
|
lineage2.1
|
None
|
SRR12062493
|
Pre-XDR-TB
|
lineage4.4.2
|
None
|
SRR23961558
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR7535082
|
Sensitive
|
lineage4.9
|
None
|
ERR323062
|
Sensitive
|
lineage4.9
|
None
|
ERR4828872
|
Sensitive
|
lineage4.2;lineage4.9
|
None
|
SAMEA3501063
|
RR-TB
|
lineage4.8
|
None
|
SRR1175506
|
Sensitive
|
lineage4.9
|
None
|
SRR1180250
|
Other
|
lineage4.9
|
None
|
ERR978750
|
RR-TB
|
lineage4.8
|
None
|
ERR323066
|
Sensitive
|
lineage4.9
|
None
|
SRR1180406
|
Sensitive
|
lineage4.9
|
None
|
SRR5007204
|
Other
|
lineage4.1.2.1
|
None
|
SRR9971114
|
Other
|
lineage2.2.1
|
None
|
ERR978755
|
RR-TB
|
lineage4.8
|
None
|
SRR9971041
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR10315556
|
Sensitive
|
lineage2.2.1
|
None
|
SRR1180345
|
Other
|
lineage4.9
|
None
|
SRR1172807
|
Sensitive
|
lineage4.9
|
None
|
ERR4809333
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR11342649
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR1063896
|
Sensitive
|
|
None
|
SRR18003042
|
Other
|
lineage2.2.1
|
None
|
ERR502511
|
Sensitive
|
lineage4.9
|
None
|
ERR550636
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR1180391
|
Sensitive
|
lineage4.9
|
None
|
ERR978694_ERR978693
|
Other
|
lineage4.8
|
None
|
SRR1180444
|
Sensitive
|
lineage4.9
|
None
|
ERR4831620
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1159378
|
Other
|
lineage4.9
|
None
|
ERR6358979
|
Other
|
lineage4.9
|
None
|
SRR10315466
|
RR-TB
|
lineage2.2.1
|
None
|
SRR1184114
|
Sensitive
|
lineage2.2.1;lineage4.9
|
None
|
ERR736856
|
Sensitive
|
lineage4.9
|
None
|
SAMEA3501065
|
RR-TB
|
lineage4.8
|
None
|
ERR978750_ERR978752_ERR978751
|
RR-TB
|
lineage4.8
|
None
|
SRR10315751
|
MDR-TB
|
lineage4.8
|
None
|
ERR978755_ERR978756_ERR978754_ERR978757
|
RR-TB
|
lineage4.8
|
None
|
SRR1181283
|
Sensitive
|
lineage4.9
|
None
|
ERR4797184
|
Sensitive
|
lineage4.9
|
None
|
SAMEA2533358
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR124636
|
Sensitive
|
lineage4.9
|
None
|
ERR067699
|
Sensitive
|
La1;lineage2;lineage4.9
|
None
|
ERR6359069
|
Sensitive
|
lineage4.9
|
None
|
ERR6866125
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR26112831
|
Sensitive
|
lineage2.2.1
|
None
|
ERR751326
|
Other
|
lineage4.9
|
None
|
SRR6397815
|
Other
|
lineage4.4.1.1
|
None
|
ERR4769436
|
Other
|
La1.3
|
None
|
SRR5341267
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR1183054
|
Sensitive
|
lineage4.9
|
None
|
SRR22248471
|
HR-TB
|
lineage4.1.2
|
None
|
ERR4829333
|
Other
|
lineage4
|
None
|
SRR1181349
|
Sensitive
|
lineage4
|
None
|
ERR4816466
|
HR-TB
|
lineage4.9
|
None
|
SRR12416842
|
HR-TB
|
lineage4.9
|
None
|
ERR133825
|
HR-TB
|
La1;lineage4.9
|
None
|
ERR2228900
|
Other
|
lineage4.8
|
None
|
ERR2026696
|
MDR-TB
|
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3
|
None
|
SRR3675449
|
Other
|
M.canetti;lineage4.9
|
None
|
SRR3675246
|
Other
|
lineage4.9
|
None
|
ERR3445487
|
Other
|
La1.7.X-unk4
|
None
|
SRR1180446
|
Other
|
lineage4.9
|
None
|
ERR11465711
|
Other
|
lineage1.2.2.1;lineage4.4.1.1
|
None
|
SRR11342647
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR978734_ERR978733_ERR978735
|
RR-TB
|
lineage4.8
|
None
|
ERR978746
|
RR-TB
|
lineage4.8
|
None
|
ERR736834
|
Sensitive
|
lineage4.9
|
None
|
SRR5341298
|
Sensitive
|
lineage4.9
|
None
|
SRR1181351
|
Sensitive
|
lineage4.9
|
None
|
ERR4797264
|
Sensitive
|
lineage4.9
|
None
|
SRR5341299
|
HR-TB
|
lineage4.9
|
None
|
ERR978754
|
RR-TB
|
lineage4.8
|
None
|
SAMEA3501070
|
RR-TB
|
lineage4.8
|
None
|
SRR5341469
|
HR-TB
|
lineage4.9
|
None
|
SRR11342664
|
MDR-TB
|
lineage2.2.2
|
None
|
SAMEA3501052
|
RR-TB
|
lineage4.8
|
None
|
SRR1180996
|
Sensitive
|
lineage4.9
|
None
|
SRR1181402
|
Sensitive
|
lineage4.9
|
None
|
SAMEA3501046
|
RR-TB
|
lineage4.8
|
None
|
ERR6359070
|
Sensitive
|
lineage4.9
|
None
|
SRR5341412
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR11252664
|
Other
|
lineage2.2.1
|
None
|
ERR4769418
|
Other
|
La1.2
|
None
|
SRR11342671
|
RR-TB
|
lineage4.1.3
|
None
|
SRR11342673
|
RR-TB
|
lineage4.3.4.2
|
None
|
SRR19295647
|
Sensitive
|
lineage4.9
|
None
|
SRR29231479
|
RR-TB
|
lineage4.9
|
None
|
SRR6046397
|
Other
|
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
|
None
|
ERR4819809
|
HR-TB
|
lineage4.6.2.2
|
None
|
SRR1180410
|
Sensitive
|
lineage4.9
|
None
|
SRR7236177
|
Other
|
La1.8.1
|
None
|
SRR28859927
|
Sensitive
|
lineage2.2.1
|
None
|
ERR4796577
|
HR-TB
|
|
None
|
SRR1158918
|
Sensitive
|
lineage4.9
|
None
|
ERR266123
|
Sensitive
|
M.canetti
|
None
|
ERR978733
|
RR-TB
|
lineage4.8
|
None
|
SRR3675571
|
HR-TB
|
M.canetti;lineage4.2;lineage4.9
|
None
|
ERR736872
|
HR-TB
|
lineage4.9
|
None
|