Run ID: SRR6046250
Sample name:
Date: 04-04-2023 12:13:39
Number of reads: 33225
Percentage reads mapped: 1.73
Strain: lineage4.9
Drug-resistance: Other
Drug | Resistance | Supporting mutations |
---|
Lineage | Family | Main Spoligotype | RDs | Frequency |
---|---|---|---|---|
lineage4 | Euro-American | LAM;T;S;X;H | None | 1.0 |
lineage4.9 | Euro-American (H37Rv-like) | T1 | None | 1.0 |
Gene | Chromosome position | Mutation | Type | Estimated fraction |
---|---|---|---|---|
gyrA | 8946 | c.1645_1647delTTGinsCTC | synonymous_variant | 1.0 |
gyrA | 8967 | p.Ala556Lys | missense_variant | 1.0 |
gyrA | 8996 | c.1695T>C | synonymous_variant | 1.0 |
gyrA | 8998 | p.Leu566Trp | missense_variant | 1.0 |
rpoB | 760325 | c.519G>C | synonymous_variant | 1.0 |
rpoB | 760331 | c.525G>T | synonymous_variant | 1.0 |
rpoB | 760334 | c.528G>T | synonymous_variant | 1.0 |
rpoB | 760340 | c.534G>C | synonymous_variant | 1.0 |
rpoB | 760355 | p.Glu183Asp | missense_variant | 1.0 |
rpoB | 760357 | p.Thr184Ser | missense_variant | 1.0 |
rpoB | 760361 | c.555T>C | synonymous_variant | 1.0 |
rpoB | 760907 | c.1101C>T | synonymous_variant | 1.0 |
rpoB | 760910 | c.1104C>T | synonymous_variant | 1.0 |
rpoB | 760916 | c.1110C>T | synonymous_variant | 1.0 |
rpoB | 760919 | c.1113C>T | synonymous_variant | 1.0 |
rpoC | 762374 | c.-996G>C | upstream_gene_variant | 1.0 |
rpoC | 762395 | c.-975G>C | upstream_gene_variant | 1.0 |
rpoC | 762398 | c.-972T>C | upstream_gene_variant | 1.0 |
rpoC | 762401 | c.-969G>C | upstream_gene_variant | 1.0 |
rpoC | 762404 | c.-966T>C | upstream_gene_variant | 1.0 |
rpoC | 762410 | c.-960T>C | upstream_gene_variant | 1.0 |
rpoC | 762416 | c.-954A>G | upstream_gene_variant | 1.0 |
rpoC | 762962 | c.-408C>T | upstream_gene_variant | 1.0 |
rpoC | 762971 | c.-399G>A | upstream_gene_variant | 1.0 |
rpoC | 762983 | c.-387C>T | upstream_gene_variant | 1.0 |
rpoC | 762989 | c.-381G>C | upstream_gene_variant | 1.0 |
rpoC | 762995 | c.-375G>T | upstream_gene_variant | 1.0 |
rpoB | 763005 | p.Cys1067Val | missense_variant | 1.0 |
rpoC | 763013 | c.-357C>A | upstream_gene_variant | 1.0 |
rpoC | 763022 | c.-348C>A | upstream_gene_variant | 0.8 |
rpoC | 763031 | c.-339T>C | upstream_gene_variant | 1.0 |
rpoC | 763052 | c.-318G>T | upstream_gene_variant | 0.8 |
rpoC | 763053 | c.-317T>C | upstream_gene_variant | 1.0 |
rpoC | 763058 | c.-312C>G | upstream_gene_variant | 1.0 |
rpoC | 763070 | c.-300T>C | upstream_gene_variant | 1.0 |
rpoC | 763109 | c.-261C>G | upstream_gene_variant | 1.0 |
rpoC | 763115 | c.-255T>C | upstream_gene_variant | 1.0 |
rpoC | 763127 | c.-243G>C | upstream_gene_variant | 0.67 |
rpoC | 763130 | c.-240G>A | upstream_gene_variant | 1.0 |
rpoC | 763133 | c.-237G>C | upstream_gene_variant | 0.67 |
rpoC | 763136 | c.-234C>T | upstream_gene_variant | 1.0 |
rpoC | 763142 | c.-228C>G | upstream_gene_variant | 1.0 |
rpoC | 763158 | c.-212C>T | upstream_gene_variant | 1.0 |
rpoC | 763570 | c.201G>T | synonymous_variant | 1.0 |
rpoC | 763573 | c.204G>C | synonymous_variant | 1.0 |
rpoC | 763578 | p.Phe70Tyr | missense_variant | 0.67 |
rpoC | 763591 | c.222C>T | synonymous_variant | 0.67 |
rpoC | 763594 | c.225C>T | synonymous_variant | 1.0 |
rpoC | 763603 | c.234C>T | synonymous_variant | 0.67 |
rpoC | 763609 | c.240C>T | synonymous_variant | 0.67 |
rpoC | 763619 | p.Arg84Lys | missense_variant | 1.0 |
rpoC | 763622 | p.Ala85Ser | missense_variant | 1.0 |
rpoC | 763633 | c.264T>C | synonymous_variant | 1.0 |
rpoC | 763642 | c.273G>C | synonymous_variant | 1.0 |
rpoC | 763660 | c.291T>G | synonymous_variant | 1.0 |
rpoC | 763663 | c.294C>T | synonymous_variant | 1.0 |
rpoC | 763666 | c.297G>T | synonymous_variant | 1.0 |
rpoC | 763669 | c.300C>A | synonymous_variant | 1.0 |
rpoC | 763672 | c.303C>G | synonymous_variant | 1.0 |
rpoC | 764272 | c.903G>C | synonymous_variant | 1.0 |
rpoC | 764278 | c.909A>G | synonymous_variant | 1.0 |
rpoC | 764287 | c.918C>T | synonymous_variant | 1.0 |
rpoC | 764293 | c.924G>C | synonymous_variant | 1.0 |
rpoC | 764297 | p.Met310Leu | missense_variant | 1.0 |
rpoC | 764341 | c.972G>T | synonymous_variant | 1.0 |
rpoC | 764344 | c.975C>T | synonymous_variant | 1.0 |
rpoC | 764347 | c.978G>A | synonymous_variant | 0.67 |
rpoC | 764357 | c.988_990delCTCinsTTG | synonymous_variant | 0.67 |
rpoC | 764362 | c.993C>T | synonymous_variant | 0.67 |
rpoC | 764365 | c.996C>T | synonymous_variant | 1.0 |
rpoC | 764371 | c.1002G>A | synonymous_variant | 1.0 |
rpoC | 764377 | c.1008C>T | synonymous_variant | 0.83 |
rpoC | 764380 | c.1011G>C | synonymous_variant | 1.0 |
rpoC | 764398 | c.1029G>C | synonymous_variant | 0.91 |
rpoC | 764404 | c.1035C>T | synonymous_variant | 0.91 |
rpoC | 764405 | c.1036_1038delAGGinsCGT | synonymous_variant | 1.0 |
rpoC | 764428 | c.1059G>T | synonymous_variant | 1.0 |
rpoC | 764434 | c.1065A>G | synonymous_variant | 1.0 |
rpoC | 764435 | c.1066_1068delAGGinsCGC | synonymous_variant | 1.0 |
rpoC | 764438 | p.Leu357Met | missense_variant | 1.0 |
rpoC | 764441 | p.Ile358Leu | missense_variant | 1.0 |
rpoC | 764449 | c.1080G>C | synonymous_variant | 1.0 |
rpoC | 764455 | c.1086G>T | synonymous_variant | 1.0 |
rpoC | 764461 | c.1092A>G | synonymous_variant | 1.0 |
rpoC | 764470 | c.1101C>G | synonymous_variant | 1.0 |
rpoC | 764485 | c.1116G>C | synonymous_variant | 1.0 |
rpoC | 764497 | c.1128A>G | synonymous_variant | 1.0 |
rpoC | 764500 | c.1131C>G | synonymous_variant | 1.0 |
rpoC | 764506 | c.1137C>T | synonymous_variant | 0.86 |
rpoC | 764509 | c.1140G>A | synonymous_variant | 1.0 |
rpoC | 764521 | c.1152T>C | synonymous_variant | 1.0 |
rpoC | 764527 | c.1158C>A | synonymous_variant | 0.67 |
rpoC | 764536 | c.1167G>T | synonymous_variant | 1.0 |
rpoC | 764605 | c.1236G>C | synonymous_variant | 1.0 |
rpoC | 764632 | c.1263T>C | synonymous_variant | 1.0 |
rpoC | 764692 | c.1323C>T | synonymous_variant | 1.0 |
rpoC | 764713 | c.1344G>C | synonymous_variant | 1.0 |
rpoC | 764716 | c.1347G>C | synonymous_variant | 1.0 |
rpoC | 764911 | c.1542A>G | synonymous_variant | 1.0 |
rpoC | 764912 | p.Met515Gln | missense_variant | 1.0 |
rpoC | 764932 | c.1563C>G | synonymous_variant | 1.0 |
rpoC | 764935 | c.1566T>C | synonymous_variant | 1.0 |
rpoC | 764948 | c.1579T>C | synonymous_variant | 1.0 |
rpoC | 764968 | c.1599T>C | synonymous_variant | 1.0 |
rpsL | 781658 | c.99A>G | synonymous_variant | 1.0 |
rpsL | 781682 | c.123T>C | synonymous_variant | 1.0 |
rpsL | 781754 | c.195G>T | synonymous_variant | 1.0 |
rpsL | 781760 | c.201T>C | synonymous_variant | 1.0 |
rpsL | 781766 | c.207C>T | synonymous_variant | 1.0 |
rpsL | 781811 | c.252C>T | synonymous_variant | 1.0 |
rpsL | 781814 | c.255C>T | synonymous_variant | 1.0 |
rpsL | 781817 | c.258G>T | synonymous_variant | 1.0 |
rpsL | 781829 | c.270G>C | synonymous_variant | 1.0 |
rpsL | 781832 | c.273T>C | synonymous_variant | 1.0 |
rpsL | 781838 | c.279G>T | synonymous_variant | 1.0 |
rpsL | 781841 | c.282C>T | synonymous_variant | 1.0 |
rpsL | 781859 | c.300T>A | synonymous_variant | 1.0 |
rpsL | 781865 | c.306G>C | synonymous_variant | 1.0 |
rpsL | 781868 | c.309T>C | synonymous_variant | 1.0 |
rpsL | 781871 | c.312G>C | synonymous_variant | 1.0 |
rpsL | 781892 | c.333A>G | synonymous_variant | 1.0 |
rpsL | 781898 | c.339A>C | synonymous_variant | 1.0 |
rpsL | 781901 | c.342C>T | synonymous_variant | 1.0 |
rrs | 1471850 | n.5G>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1471852 | n.7T>A | non_coding_transcript_exon_variant | 1.0 |
rrs | 1471923 | n.78T>C | non_coding_transcript_exon_variant | 1.0 |
rrs | 1471934 | n.89A>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1471985 | n.140T>C | non_coding_transcript_exon_variant | 1.0 |
rrs | 1471986 | n.141C>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472027 | n.184_188delCGGGA | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472037 | n.192A>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472038 | n.193_194insTA | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472041 | n.196C>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472042 | n.197_198insG | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472053 | n.211_212delGC | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472057 | n.212C>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472061 | n.216A>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472062 | n.217G>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472069 | n.224G>A | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472078 | n.233C>T | non_coding_transcript_exon_variant | 0.58 |
rrs | 1472106 | n.261G>A | non_coding_transcript_exon_variant | 0.98 |
rrs | 1472108 | n.263C>T | non_coding_transcript_exon_variant | 0.99 |
rrs | 1472123 | n.278A>G | non_coding_transcript_exon_variant | 0.99 |
rrs | 1472138 | n.293C>A | non_coding_transcript_exon_variant | 0.98 |
rrs | 1472147 | n.302G>T | non_coding_transcript_exon_variant | 0.97 |
rrs | 1472150 | n.305T>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472151 | n.306C>T | non_coding_transcript_exon_variant | 0.99 |
rrs | 1472160 | n.315C>T | non_coding_transcript_exon_variant | 0.96 |
rrs | 1472278 | n.433C>T | non_coding_transcript_exon_variant | 0.99 |
rrs | 1472279 | n.434T>C | non_coding_transcript_exon_variant | 0.99 |
rrs | 1472285 | n.440A>G | non_coding_transcript_exon_variant | 0.99 |
rrs | 1472289 | n.444T>G | non_coding_transcript_exon_variant | 0.99 |
rrs | 1472290 | n.445C>G | non_coding_transcript_exon_variant | 0.99 |
rrs | 1472296 | n.454_458delTCCGG | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472303 | n.458G>C | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472324 | n.479G>C | non_coding_transcript_exon_variant | 0.99 |
rrs | 1472325 | n.480G>C | non_coding_transcript_exon_variant | 0.99 |
rrs | 1472344 | n.499C>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472382 | n.537G>A | non_coding_transcript_exon_variant | 0.99 |
rrs | 1472431 | n.586G>A | non_coding_transcript_exon_variant | 0.99 |
rrs | 1472435 | n.590T>C | non_coding_transcript_exon_variant | 0.99 |
rrs | 1472438 | n.593T>C | non_coding_transcript_exon_variant | 0.99 |
rrs | 1472439 | n.594C>T | non_coding_transcript_exon_variant | 0.99 |
rrs | 1472447 | n.602C>T | non_coding_transcript_exon_variant | 0.99 |
rrs | 1472448 | n.603T>C | non_coding_transcript_exon_variant | 0.99 |
rrs | 1472452 | n.607G>A | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472464 | n.619A>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472471 | n.626G>A | non_coding_transcript_exon_variant | 0.99 |
rrs | 1472484 | n.639A>T | non_coding_transcript_exon_variant | 0.99 |
rrs | 1472489 | n.644A>T | non_coding_transcript_exon_variant | 0.99 |
rrs | 1472498 | n.653C>T | non_coding_transcript_exon_variant | 0.99 |
rrs | 1472504 | n.659A>T | non_coding_transcript_exon_variant | 0.98 |
rrs | 1472505 | n.660G>A | non_coding_transcript_exon_variant | 0.98 |
rrs | 1472530 | n.685G>A | non_coding_transcript_exon_variant | 0.99 |
rrs | 1472558 | n.713G>A | non_coding_transcript_exon_variant | 0.92 |
rrs | 1472569 | n.724G>A | non_coding_transcript_exon_variant | 0.92 |
rrs | 1472573 | n.728C>T | non_coding_transcript_exon_variant | 0.92 |
rrs | 1472574 | n.729T>A | non_coding_transcript_exon_variant | 0.92 |
rrs | 1472584 | n.739A>T | non_coding_transcript_exon_variant | 0.92 |
rrs | 1472607 | n.762G>A | non_coding_transcript_exon_variant | 0.9 |
rrs | 1472612 | n.767G>T | non_coding_transcript_exon_variant | 0.89 |
rrs | 1472616 | n.771G>A | non_coding_transcript_exon_variant | 0.95 |
rrs | 1472660 | n.815T>C | non_coding_transcript_exon_variant | 0.81 |
rrs | 1472661 | n.816A>G | non_coding_transcript_exon_variant | 0.97 |
rrs | 1472690 | n.845C>T | non_coding_transcript_exon_variant | 0.99 |
rrs | 1472713 | n.868T>C | non_coding_transcript_exon_variant | 0.99 |
rrs | 1472714 | n.869A>G | non_coding_transcript_exon_variant | 0.83 |
rrs | 1472828 | n.983T>C | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472836 | n.991G>A | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472840 | n.995A>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472843 | n.998_999insT | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472846 | n.1002delG | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472849 | n.1004C>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472850 | n.1005T>C | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472855 | n.1011_1012insGT | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472874 | n.1029C>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472875 | n.1030T>A | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472880 | n.1035G>A | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472957 | n.1112C>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472973 | n.1128A>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472987 | n.1142G>A | non_coding_transcript_exon_variant | 0.99 |
rrs | 1473005 | n.1160C>T | non_coding_transcript_exon_variant | 0.98 |
rrs | 1473026 | n.1181T>C | non_coding_transcript_exon_variant | 0.98 |
rrs | 1473089 | n.1244A>T | non_coding_transcript_exon_variant | 0.92 |
rrs | 1473091 | n.1246G>C | non_coding_transcript_exon_variant | 0.91 |
rrs | 1473094 | n.1249T>A | non_coding_transcript_exon_variant | 0.91 |
rrs | 1473099 | n.1254T>G | non_coding_transcript_exon_variant | 0.91 |
rrs | 1473100 | n.1255G>C | non_coding_transcript_exon_variant | 0.99 |
rrs | 1473102 | n.1257C>T | non_coding_transcript_exon_variant | 0.96 |
rrs | 1473104 | n.1259C>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1473109 | n.1264T>G | non_coding_transcript_exon_variant | 0.91 |
rrs | 1473111 | n.1266A>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1473115 | n.1270G>T | non_coding_transcript_exon_variant | 0.96 |
rrs | 1473120 | n.1275C>G | non_coding_transcript_exon_variant | 0.9 |
rrs | 1473121 | n.1276T>C | non_coding_transcript_exon_variant | 0.95 |
rrs | 1473123 | n.1278A>T | non_coding_transcript_exon_variant | 1.0 |
rrs | 1473129 | n.1284C>T | non_coding_transcript_exon_variant | 0.95 |
rrs | 1473135 | n.1290C>T | non_coding_transcript_exon_variant | 0.92 |
rrs | 1473145 | n.1300C>T | non_coding_transcript_exon_variant | 0.95 |
rrs | 1473166 | n.1321G>A | non_coding_transcript_exon_variant | 0.95 |
rrs | 1473202 | n.1357C>T | non_coding_transcript_exon_variant | 0.93 |
rrs | 1473259 | n.1414C>T | non_coding_transcript_exon_variant | 0.99 |
rrs | 1473276 | n.1431A>G | non_coding_transcript_exon_variant | 1.0 |
rrs | 1473301 | n.1456T>C | non_coding_transcript_exon_variant | 1.0 |
rrl | 1473676 | n.19G>A | non_coding_transcript_exon_variant | 0.86 |
rrl | 1473696 | n.39T>C | non_coding_transcript_exon_variant | 0.25 |
rrl | 1473697 | n.40C>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1473698 | n.41G>C | non_coding_transcript_exon_variant | 0.75 |
rrl | 1473699 | n.42A>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1473700 | n.43G>A | non_coding_transcript_exon_variant | 0.75 |
rrl | 1473719 | n.62G>A | non_coding_transcript_exon_variant | 0.71 |
rrl | 1473728 | n.71A>T | non_coding_transcript_exon_variant | 0.71 |
rrl | 1473743 | n.86C>T | non_coding_transcript_exon_variant | 0.75 |
rrl | 1473750 | n.93C>T | non_coding_transcript_exon_variant | 0.75 |
rrl | 1473758 | n.101G>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1473770 | n.113T>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1473806 | n.149C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1473811 | n.154C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1473813 | n.156C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1473823 | n.166T>C | non_coding_transcript_exon_variant | 1.0 |
rrl | 1473877 | n.220G>A | non_coding_transcript_exon_variant | 0.83 |
rrl | 1473880 | n.223A>G | non_coding_transcript_exon_variant | 0.83 |
rrl | 1473888 | n.231T>A | non_coding_transcript_exon_variant | 1.0 |
rrl | 1473895 | n.238C>T | non_coding_transcript_exon_variant | 0.83 |
rrl | 1473898 | n.241C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1473899 | n.242A>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1473905 | n.248T>C | non_coding_transcript_exon_variant | 0.83 |
rrl | 1474110 | n.453A>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474123 | n.466A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474130 | n.473C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474140 | n.483C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474143 | n.486T>C | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474151 | n.494C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474200 | n.545delT | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474249 | n.592G>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474253 | n.596A>T | non_coding_transcript_exon_variant | 0.97 |
rrl | 1474263 | n.606G>A | non_coding_transcript_exon_variant | 0.97 |
rrl | 1474269 | n.612C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474293 | n.637_650delCCTCTCCGGAGGAG | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474309 | n.652G>T | non_coding_transcript_exon_variant | 0.98 |
rrl | 1474311 | n.654_655insT | non_coding_transcript_exon_variant | 0.98 |
rrl | 1474351 | n.694G>C | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474353 | n.696A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474362 | n.705A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474384 | n.727C>T | non_coding_transcript_exon_variant | 0.92 |
rrl | 1474387 | n.730C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474393 | n.736A>G | non_coding_transcript_exon_variant | 0.33 |
rrl | 1474402 | n.745T>C | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474406 | n.749T>C | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474413 | n.757_777delCCCACACGCGCATACGCGCGT | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474437 | n.781_782delAA | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474447 | n.790G>A | non_coding_transcript_exon_variant | 0.88 |
rrl | 1474451 | n.794T>C | non_coding_transcript_exon_variant | 0.95 |
rrl | 1474467 | n.810A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474487 | n.830G>T | non_coding_transcript_exon_variant | 0.97 |
rrl | 1474495 | n.838G>A | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474496 | n.839C>G | non_coding_transcript_exon_variant | 0.95 |
rrl | 1474497 | n.840G>C | non_coding_transcript_exon_variant | 0.93 |
rrl | 1474498 | n.841G>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474505 | n.848C>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474506 | n.849C>G | non_coding_transcript_exon_variant | 0.93 |
rrl | 1474507 | n.850G>T | non_coding_transcript_exon_variant | 0.93 |
rrl | 1474508 | n.851C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474517 | n.860C>G | non_coding_transcript_exon_variant | 0.95 |
rrl | 1474527 | n.870T>G | non_coding_transcript_exon_variant | 0.98 |
rrl | 1474537 | n.880G>A | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474542 | n.885A>C | non_coding_transcript_exon_variant | 0.98 |
rrl | 1474626 | n.969T>C | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474632 | n.975G>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474634 | n.977T>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474636 | n.979A>C | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474638 | n.981C>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474658 | n.1001A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474663 | n.1006C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474722 | n.1065T>C | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474734 | n.1077G>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474736 | n.1079C>T | non_coding_transcript_exon_variant | 0.98 |
rrl | 1474749 | n.1092C>T | non_coding_transcript_exon_variant | 0.97 |
rrl | 1474751 | n.1094G>A | non_coding_transcript_exon_variant | 0.97 |
rrl | 1474753 | n.1097delC | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474760 | n.1103A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474794 | n.1137C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474798 | n.1141C>G | non_coding_transcript_exon_variant | 0.96 |
rrl | 1474803 | n.1146G>A | non_coding_transcript_exon_variant | 0.96 |
rrl | 1474812 | n.1155G>A | non_coding_transcript_exon_variant | 0.96 |
rrl | 1474823 | n.1166C>G | non_coding_transcript_exon_variant | 0.97 |
rrl | 1474824 | n.1167A>G | non_coding_transcript_exon_variant | 0.99 |
rrl | 1474825 | n.1168G>A | non_coding_transcript_exon_variant | 0.96 |
rrl | 1474830 | n.1173A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474832 | n.1175A>T | non_coding_transcript_exon_variant | 0.97 |
rrl | 1474837 | n.1180A>G | non_coding_transcript_exon_variant | 0.95 |
rrl | 1474864 | n.1207C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1474896 | n.1239A>G | non_coding_transcript_exon_variant | 0.96 |
rrl | 1474901 | n.1244A>G | non_coding_transcript_exon_variant | 0.96 |
rrl | 1474904 | n.1247G>C | non_coding_transcript_exon_variant | 0.97 |
rrl | 1474913 | n.1256T>C | non_coding_transcript_exon_variant | 0.99 |
rrl | 1474921 | n.1264C>T | non_coding_transcript_exon_variant | 0.95 |
rrl | 1474932 | n.1275C>T | non_coding_transcript_exon_variant | 0.96 |
rrl | 1475171 | n.1514C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475175 | n.1518G>C | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475176 | n.1519G>A | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475187 | n.1530C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475188 | n.1531C>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475196 | n.1539T>A | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475479 | n.1822C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475480 | n.1823A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475483 | n.1826C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475485 | n.1828C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475486 | n.1829A>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475499 | n.1842C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475514 | n.1857G>A | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475522 | n.1865A>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475526 | n.1869C>A | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475531 | n.1874C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475539 | n.1882A>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475542 | n.1885A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475544 | n.1887A>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475545 | n.1888T>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475550 | n.1893A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475574 | n.1917C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475672 | n.2015C>T | non_coding_transcript_exon_variant | 0.67 |
rrl | 1475673 | n.2016T>C | non_coding_transcript_exon_variant | 0.67 |
rrl | 1475704 | n.2047C>T | non_coding_transcript_exon_variant | 0.5 |
rrl | 1475713 | n.2056C>T | non_coding_transcript_exon_variant | 0.96 |
rrl | 1475753 | n.2096C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475758 | n.2101A>G | non_coding_transcript_exon_variant | 0.99 |
rrl | 1475759 | n.2102C>A | non_coding_transcript_exon_variant | 0.98 |
rrl | 1475760 | n.2103C>T | non_coding_transcript_exon_variant | 0.61 |
rrl | 1475762 | n.2105G>T | non_coding_transcript_exon_variant | 0.99 |
rrl | 1475763 | n.2106C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475764 | n.2107A>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475765 | n.2108A>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475769 | n.2112_2113insC | non_coding_transcript_exon_variant | 0.99 |
rrl | 1475877 | n.2220C>G | non_coding_transcript_exon_variant | 0.95 |
rrl | 1475878 | n.2221T>A | non_coding_transcript_exon_variant | 0.95 |
rrl | 1475879 | n.2222T>C | non_coding_transcript_exon_variant | 0.95 |
rrl | 1475881 | n.2224T>C | non_coding_transcript_exon_variant | 0.96 |
rrl | 1475883 | n.2226A>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475884 | n.2227A>G | non_coding_transcript_exon_variant | 0.96 |
rrl | 1475897 | n.2240T>C | non_coding_transcript_exon_variant | 0.96 |
rrl | 1475900 | n.2243A>G | non_coding_transcript_exon_variant | 0.96 |
rrl | 1475902 | n.2245T>C | non_coding_transcript_exon_variant | 0.96 |
rrl | 1475906 | n.2249C>T | non_coding_transcript_exon_variant | 0.96 |
rrl | 1475916 | n.2259C>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475975 | n.2318C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475977 | n.2320A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475988 | n.2331A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1475997 | n.2340A>T | non_coding_transcript_exon_variant | 0.94 |
rrl | 1475998 | n.2341C>T | non_coding_transcript_exon_variant | 0.97 |
rrl | 1476001 | n.2344T>C | non_coding_transcript_exon_variant | 0.97 |
rrl | 1476029 | n.2372A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476113 | n.2456T>G | non_coding_transcript_exon_variant | 0.67 |
rrl | 1476116 | n.2459A>G | non_coding_transcript_exon_variant | 0.67 |
rrl | 1476131 | n.2474C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476164 | n.2507A>G | non_coding_transcript_exon_variant | 0.96 |
rrl | 1476165 | n.2508T>A | non_coding_transcript_exon_variant | 0.99 |
rrl | 1476188 | n.2531C>T | non_coding_transcript_exon_variant | 0.96 |
rrl | 1476194 | n.2537A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476200 | n.2543A>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476201 | n.2544C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476213 | n.2556G>T | non_coding_transcript_exon_variant | 0.95 |
rrl | 1476214 | n.2557G>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476215 | n.2558C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476224 | n.2567A>G | non_coding_transcript_exon_variant | 0.9 |
rrl | 1476234 | n.2577G>A | non_coding_transcript_exon_variant | 0.82 |
rrl | 1476245 | n.2588C>T | non_coding_transcript_exon_variant | 0.81 |
rrl | 1476250 | n.2593C>G | non_coding_transcript_exon_variant | 0.99 |
rrl | 1476255 | n.2598A>T | non_coding_transcript_exon_variant | 0.79 |
rrl | 1476256 | n.2599A>G | non_coding_transcript_exon_variant | 0.79 |
rrl | 1476257 | n.2600G>C | non_coding_transcript_exon_variant | 0.99 |
rrl | 1476260 | n.2603A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476281 | n.2624T>C | non_coding_transcript_exon_variant | 0.82 |
rrl | 1476297 | n.2640C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476298 | n.2641C>A | non_coding_transcript_exon_variant | 0.8 |
rrl | 1476300 | n.2643G>T | non_coding_transcript_exon_variant | 0.8 |
rrl | 1476301 | n.2644A>T | non_coding_transcript_exon_variant | 0.97 |
rrl | 1476307 | n.2650A>T | non_coding_transcript_exon_variant | 0.8 |
rrl | 1476309 | n.2652G>T | non_coding_transcript_exon_variant | 0.8 |
rrl | 1476428 | n.2771C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476481 | n.2824T>C | non_coding_transcript_exon_variant | 0.99 |
rrl | 1476523 | n.2867delC | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476535 | n.2878G>A | non_coding_transcript_exon_variant | 0.95 |
rrl | 1476536 | n.2879G>A | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476539 | n.2882A>G | non_coding_transcript_exon_variant | 0.98 |
rrl | 1476540 | n.2883C>G | non_coding_transcript_exon_variant | 0.98 |
rrl | 1476567 | n.2910C>T | non_coding_transcript_exon_variant | 1.0 |
rpsA | 1833940 | c.399C>T | synonymous_variant | 1.0 |
rpsA | 1833949 | c.408T>C | synonymous_variant | 1.0 |
rpsA | 1833961 | c.420C>G | synonymous_variant | 1.0 |
rpsA | 1833970 | c.429G>T | synonymous_variant | 1.0 |
rpsA | 1833976 | c.435C>T | synonymous_variant | 1.0 |
rpsA | 1833979 | c.438T>C | synonymous_variant | 1.0 |
rpsA | 1833988 | c.447C>T | synonymous_variant | 1.0 |
rpsA | 1833991 | c.450C>T | synonymous_variant | 1.0 |
rpsA | 1833994 | c.453G>C | synonymous_variant | 1.0 |
rpsA | 1834000 | c.459G>A | synonymous_variant | 1.0 |
rpsA | 1834003 | c.462G>A | synonymous_variant | 1.0 |
rpsA | 1834012 | c.471G>C | synonymous_variant | 1.0 |
rpsA | 1834015 | c.474G>T | synonymous_variant | 1.0 |
rpsA | 1834018 | c.477C>T | synonymous_variant | 1.0 |
rpsA | 1834025 | p.Gln162Glu | missense_variant | 1.0 |
rpsA | 1834030 | c.489C>T | synonymous_variant | 1.0 |
rpsA | 1834039 | c.498C>T | synonymous_variant | 1.0 |
rpsA | 1834040 | p.Lys167Gln | missense_variant | 1.0 |
rpsA | 1834045 | c.504G>A | synonymous_variant | 1.0 |
rpsA | 1834046 | p.Ile169Leu | missense_variant | 1.0 |
rpsA | 1834051 | p.Glu170Asp | missense_variant | 1.0 |
rpsA | 1834054 | c.513C>T | synonymous_variant | 1.0 |
rpsA | 1834090 | c.549G>T | synonymous_variant | 1.0 |
rpsA | 1834093 | c.552G>T | synonymous_variant | 1.0 |
rpsA | 1834189 | c.648G>T | synonymous_variant | 1.0 |
rpsA | 1834195 | c.654G>C | synonymous_variant | 1.0 |
rpsA | 1834210 | c.669C>T | synonymous_variant | 1.0 |
rpsA | 1834211 | p.Ala224Ser | missense_variant | 1.0 |
rpsA | 1834219 | c.678C>G | synonymous_variant | 1.0 |
rpsA | 1834222 | c.681T>C | synonymous_variant | 1.0 |
rpsA | 1834225 | c.684C>G | synonymous_variant | 1.0 |
rpsA | 1834228 | c.687C>T | synonymous_variant | 1.0 |
rpsA | 1834234 | c.693G>C | synonymous_variant | 1.0 |
rpsA | 1834246 | c.705G>A | synonymous_variant | 1.0 |
rpsA | 1834249 | c.708T>C | synonymous_variant | 1.0 |
rpsA | 1834252 | c.711C>T | synonymous_variant | 1.0 |
rpsA | 1834261 | c.720A>G | synonymous_variant | 1.0 |
rpsA | 1834264 | c.723G>C | synonymous_variant | 1.0 |
rpsA | 1834285 | c.744G>A | synonymous_variant | 0.88 |
rpsA | 1834294 | c.753G>T | synonymous_variant | 0.88 |
rpsA | 1834298 | p.Gln253Thr | missense_variant | 0.88 |
rpsA | 1834315 | c.774C>A | synonymous_variant | 0.86 |
rpsA | 1834321 | c.780C>T | synonymous_variant | 0.86 |
rpsA | 1834327 | c.786G>T | synonymous_variant | 0.67 |
rpsA | 1834330 | c.789C>G | synonymous_variant | 0.67 |
rpsA | 1834451 | c.910T>C | synonymous_variant | 1.0 |
rpsA | 1834459 | c.918G>A | synonymous_variant | 1.0 |
rpsA | 1834468 | c.927A>G | synonymous_variant | 1.0 |
rpsA | 1834474 | c.933C>T | synonymous_variant | 1.0 |
rpsA | 1834483 | c.942G>A | synonymous_variant | 1.0 |
rpsA | 1834486 | c.945G>A | synonymous_variant | 1.0 |
rpsA | 1834489 | c.948T>C | synonymous_variant | 1.0 |
rpsA | 1834495 | c.954G>A | synonymous_variant | 1.0 |
rpsA | 1834504 | c.963G>T | synonymous_variant | 1.0 |
rpsA | 1834523 | p.Glu328Gln | missense_variant | 0.93 |
rpsA | 1834528 | c.987T>C | synonymous_variant | 1.0 |
rpsA | 1834540 | c.999G>T | synonymous_variant | 1.0 |
rpsA | 1834543 | c.1002C>A | synonymous_variant | 1.0 |
rpsA | 1834546 | c.1005T>C | synonymous_variant | 1.0 |
rpsA | 1834552 | c.1011G>T | synonymous_variant | 0.93 |
rpsA | 1834555 | c.1014T>C | synonymous_variant | 1.0 |
rpsA | 1834556 | p.Ala339Asn | missense_variant | 1.0 |
rpsA | 1834561 | c.1020C>T | synonymous_variant | 0.93 |
rpsA | 1834567 | p.Asp342Glu | missense_variant | 0.93 |
rpsA | 1834570 | p.Asp343Glu | missense_variant | 0.93 |
rpsA | 1834573 | c.1032G>C | synonymous_variant | 0.93 |
rpsA | 1834600 | c.1059G>C | synonymous_variant | 0.82 |
rpsA | 1834606 | c.1065C>T | synonymous_variant | 1.0 |
rpsA | 1834612 | c.1071G>C | synonymous_variant | 0.77 |
rpsA | 1834618 | c.1077G>C | synonymous_variant | 0.7 |
rpsA | 1834619 | c.1078T>C | synonymous_variant | 1.0 |
rpsA | 1834622 | c.1081_1083delTCGinsAGC | synonymous_variant | 0.3 |
rpsA | 1834627 | c.1086C>G | synonymous_variant | 0.7 |
rpsA | 1834633 | c.1092A>G | synonymous_variant | 1.0 |
rpsA | 1834636 | c.1095C>A | synonymous_variant | 0.7 |
rpsA | 1834637 | p.Asn366Asp | missense_variant | 0.7 |
rpsA | 1834657 | c.1116G>A | synonymous_variant | 0.7 |
rpsA | 1834663 | c.1122C>T | synonymous_variant | 0.71 |
rpsA | 1834666 | c.1125G>A | synonymous_variant | 0.67 |
rpsA | 1834667 | p.Ala376Ser | missense_variant | 1.0 |
rpsA | 1834688 | c.1147_1149delAGTinsTCC | synonymous_variant | 0.6 |
rpsA | 1834712 | p.Ile391Leu | missense_variant | 1.0 |
rpsA | 1834720 | c.1179C>A | synonymous_variant | 1.0 |
kasA | 2517941 | c.-174C>G | upstream_gene_variant | 1.0 |
kasA | 2517959 | c.-156C>T | upstream_gene_variant | 1.0 |
kasA | 2517962 | c.-153C>G | upstream_gene_variant | 1.0 |
kasA | 2517968 | c.-147T>C | upstream_gene_variant | 1.0 |
kasA | 2517974 | c.-141T>C | upstream_gene_variant | 1.0 |
clpC1 | 4038713 | c.1992T>C | synonymous_variant | 1.0 |
clpC1 | 4038744 | p.Thr654Glu | missense_variant | 0.88 |
clpC1 | 4038746 | c.1959C>T | synonymous_variant | 0.88 |
clpC1 | 4038755 | c.1950G>C | synonymous_variant | 1.0 |
clpC1 | 4038764 | c.1939_1941delCTCinsTTG | synonymous_variant | 0.78 |
clpC1 | 4038767 | c.1938G>C | synonymous_variant | 1.0 |
clpC1 | 4038770 | c.1935C>T | synonymous_variant | 1.0 |
clpC1 | 4038773 | p.Asp644Glu | missense_variant | 1.0 |
clpC1 | 4038776 | c.1929G>A | synonymous_variant | 0.78 |
clpC1 | 4038779 | c.1924_1926delCTCinsTTG | synonymous_variant | 0.89 |
clpC1 | 4038782 | c.1923G>A | synonymous_variant | 1.0 |
clpC1 | 4038793 | c.1912C>T | synonymous_variant | 0.78 |
clpC1 | 4038795 | p.Ser637Thr | missense_variant | 0.89 |
clpC1 | 4038811 | p.Gln632Lys | missense_variant | 0.78 |
clpC1 | 4038812 | c.1893T>C | synonymous_variant | 1.0 |
clpC1 | 4038821 | c.1884G>A | synonymous_variant | 0.78 |
clpC1 | 4038836 | c.1869G>T | synonymous_variant | 0.78 |
clpC1 | 4038845 | c.1860G>C | synonymous_variant | 0.88 |
clpC1 | 4038878 | c.1827A>G | synonymous_variant | 1.0 |
clpC1 | 4038890 | c.1815G>A | synonymous_variant | 1.0 |
clpC1 | 4039991 | c.714G>C | synonymous_variant | 1.0 |
clpC1 | 4040015 | c.690G>C | synonymous_variant | 1.0 |
clpC1 | 4040021 | c.684A>C | synonymous_variant | 1.0 |