Rv1630 - c.1071G>C
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
76 Sensitive
7 RR-TB
36 HR-TB
14 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
39 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 98 |
| lineage4 | 4 |
| lineage4.1.1.1 | 2 |
| lineage2.2.1 | 6 |
| lineage4.4 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| lineage4.3.3 | 5 |
| lineage4.4.1.1.1 | 3 |
| La1.7;lineage4.9;lineage7 | 3 |
| lineage4.1.1.3 | 1 |
| lineage2.2.1;lineage4.9 | 2 |
| La1.7;lineage4.9 | 3 |
| lineage1;lineage4.9 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage2.2.2 | 1 |
| La1.7.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.8.1 | 1 |
| La3;lineage4.9 | 7 |
| lineage4.2;lineage4.9 | 2 |
| lineage4.9;lineage7 | 4 |
| lineage4.3.2.1 | 2 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| 1 | |
| lineage2;lineage4.9 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage4.1.2.1 | 3 |
| lineage4.8 | 2 |
| lineage3 | 1 |
| lineage1.2.2.2 | 1 |
| lineage1.1.3.1 | 1 |
| La1.7.1;lineage4.9 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| lineage2;lineage4 | 1 |
| lineage4.1;lineage4.9 | 1 |
| lineage4.3.4 | 1 |
| La3;lineage4 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage3.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 174 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR349298 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | SRR6045706 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | SRR12708419 | Other | lineage4.3.3 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR363446 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR6045503 | Sensitive | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | SRR5341373 | Other | lineage4.9 | None | ERR363453 | Sensitive | lineage4.9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | ERR387051 | Other | lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR369163 | Sensitive | lineage4.9 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | ERR067712 | Sensitive | lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR373945 | Sensitive | lineage4.9 | None | ERR363437 | Sensitive | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR12708392 | Other | lineage2.2.1 | None | SRR3675280 | RR-TB | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | SRR6046250 | Other | lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR21677886 | Sensitive | lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR1180399 | Sensitive | lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR349296 | Sensitive | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | ERR369159 | Sensitive | lineage4.9 | None | ERR181824 | HR-TB | lineage4.9 | None | ERR349264 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | ERR369162 | Other | lineage4.9 | None | ERR369158 | Other | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | ERR4798823 | HR-TB | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR3675292 | Sensitive | lineage4.9 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | ERR4178309 | Other | lineage4.1.2.1 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | ERR363479 | Sensitive | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | SRR16156775 | Other | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR4769433 | RR-TB | lineage4.9 | None | SRR6046897 | Sensitive | lineage4.9 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR363449 | Sensitive | lineage4.9 | None | ERR4816113 | Sensitive | lineage4.1.1.1 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR4810624 | HR-TB | lineage2.2.1 | None | SRR3675582 | Other | lineage4.9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR1063862 | HR-TB | lineage4.9 | None | SRR6046802 | Other | lineage4.9 | None | SRR11349186 | MDR-TB | lineage4.3.3 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR3283021 | HR-TB | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | ERR4769493 | Other | lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | ERR363447 | Other | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | ERR3797087 | Sensitive | lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR363500 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR1180345 | Other | lineage4.9 | None | ERR3283028 | Other | La3;lineage4 | None | ERR369151 | Other | lineage4.9 | None | ERR363498 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | ERR9119669 | HR-TB | lineage4.9 | None | SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR363490 | Sensitive | lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR6359066 | HR-TB | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | ERR4800102 | Sensitive | lineage3.1.2.1 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR349299 | Other | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR363499 | Sensitive | lineage4.9 | None |
|---|
