EBG00000313339 - n.790G>A
Drug resistance types
41 Sensitive
5 RR-TB
17 HR-TB
13 MDR-TB
5 Pre-XDR-TB
1 XDR-TB
38 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.7;lineage4.9 | 2 |
| lineage1.2.2.1;lineage4.4.1.1 | 2 |
| lineage4.9 | 49 |
| lineage2.2.1.1 | 2 |
| La1.3 | 4 |
| lineage1.2.1.2.1 | 2 |
| La1.2 | 1 |
| lineage4.9;lineage7 | 1 |
| La1;lineage4.9 | 1 |
| lineage2;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| M.canetti;lineage4.9 | 2 |
| lineage4.2.2.2 | 1 |
| lineage2.2.1;lineage4 | 2 |
| lineage2.2.1;lineage4.9 | 2 |
| lineage4.9;lineage9 | 2 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage4.2.1 | 2 |
| lineage1.2.1.2 | 1 |
| lineage3 | 5 |
| lineage4 | 1 |
| lineage2.2.1 | 3 |
| lineage4.6.2.2 | 1 |
| 1 | |
| lineage4.9;lineage6.3 | 1 |
| lineage4.1.2.1 | 5 |
| lineage4.2;lineage4.9 | 1 |
| lineage3.1;lineage9 | 1 |
| La1.7 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| lineage4.3.3 | 3 |
| lineage2.1;lineage4.9 | 1 |
| lineage4.8.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.8 | 2 |
| La2;lineage4.9;lineage9 | 1 |
| lineage6.1.3 | 1 |
| La1.4 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage4.4.1.1.1 | 1 |
| La2;lineage4.9 | 1 |
| lineage4.3.2.1 | 1 |
| La1.8.1 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 120 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675488 | Other | La1.7;lineage4.9 | None | ERR11465711 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | SRR1183111 | HR-TB | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | ERR867573 | Other | lineage4.9 | None | ERR4769555 | Sensitive | La1.3 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR21690858 | Sensitive | lineage1.2.1.2.1 | None | ERR4769418 | Other | La1.2 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | ERR4769550 | Sensitive | La1;lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181403 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR1172717 | Sensitive | lineage4.9 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR867538 | Other | lineage4.2.2.2 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR867575 | Other | lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | ERR3276167 | Sensitive | lineage1.2.1.2.1 | nl | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR11342676 | HR-TB | lineage4.6.2.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR867571 | Other | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR987722 | MDR-TB | None | ERR11465714 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | SRR1181256 | Other | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR3275190 | Other | lineage3 | nl | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | SRR3675222 | Other | La1.7 | None | SRR1172310 | HR-TB | lineage4.9 | None | SRR18912069 | Other | lineage4.1.2.1 | None | SRR6044875 | Sensitive | lineage4.9 | None | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | ERR387051 | Other | lineage4.9 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | ERR867569 | Other | lineage4.9 | None | ERR2446509 | Other | lineage3 | nl | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR1035297 | MDR-TB | lineage4.3.4.1 | br | SRR1175487 | Sensitive | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR3675582 | Other | lineage4.9 | None | ERR867572 | Other | lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR6046250 | Other | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | ERR9787153 | Other | lineage6.1.3 | None | SRR16278274 | Other | La1.4 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR4769514 | Other | La1.3 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR17832802 | HR-TB | lineage3 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR4816322 | Other | lineage4.9 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | SRR1172807 | Sensitive | lineage4.9 | None | ERR4822138 | Other | lineage4.1.2.1 | None | ERR5162090 | RR-TB | lineage4.9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | ERR4769408 | Other | La1.3 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR11342686 | MDR-TB | lineage4.8 | None | ERR4798504 | RR-TB | lineage3 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | SRR12708392 | Other | lineage2.2.1 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR1213875 | Sensitive | lineage4.3.3 | de | SRR1180319 | Sensitive | lineage4.9 | None | ERR4769552 | Sensitive | La1.3 | None | SRR7236330 | Other | La1.8.1 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None |
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