EBG00000313339 - n.790G>A
Drug resistance types
44 Sensitive
9 RR-TB
26 HR-TB
5 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
68 Other
lineage Counts
| lineage | Count |
|---|---|
| 19 | |
| lineage2.2 | 3 |
| lineage4.1.2.1 | 13 |
| lineage4.9 | 49 |
| lineage3.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4 | 7 |
| lineage3 | 11 |
| lineage4.6 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.1.2 | 2 |
| lineage4.4.1.1 | 2 |
| lineage4.8 | 3 |
| lineage6.3.1 | 1 |
| lineage2.2.1 | 9 |
| lineage1.1.3.1 | 2 |
| lineage4.3.4.2.1 | 2 |
| La2 | 2 |
| lineage4.8.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.3.3 | 3 |
| La1.3 | 6 |
| La1.2 | 1 |
| La1.8.1 | 1 |
| lineage4.9;La1.3 | 1 |
| lineage3.1.2 | 1 |
| lineage1.1.2 | 1 |
| lineage2.2.1.2 | 1 |
| lineage6.1.3 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage4.6.1.1 | 1 |
| lineage2.2.1.1 | 2 |
| lineage4.9;lineage2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2 | 1 |
| La1.4 | 1 |
| lineage4.2.2.1 | 1 |
| lineage1.2.1.2 | 1 |
| La1.7.1 | 2 |
| lineage1.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 160 |
Geographic prevalence
Country level data for this variant is available for 11 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675488 | HR-TB | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3675222 | Other | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | ERR4815783 | Other | lineage4.1.2.1 | gb | SRR3675509 | Other | lineage4.9 | None | ERR176740 | HR-TB | None | ERR4814976 | Other | lineage4.9 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR4816293 | Other | lineage4.1.2.1 | None | ERR4816231 | Other | lineage4 | None | SRR3675555 | HR-TB | None | ERR4816322 | Other | lineage4.9 | None | SRR3675571 | HR-TB | None | ERR2446509 | Other | lineage3 | nl | ERR4816699 | Other | lineage4.6 | None | ERR3276167 | Sensitive | lineage1.2.1.2.1 | nl | ERR4816852 | Other | lineage4.9 | None | ERR4817294 | Other | lineage4.1.2 | None | ERR4816868 | Other | lineage4.4.1.1 | None | ERR4818699 | Other | lineage4.1.2.1 | gb | ERR4817452 | Other | lineage4.8 | None | ERR4818440 | Other | lineage6.3.1 | None | ERR4818831 | Other | lineage3 | None | ERR2512660 | Sensitive | lineage3 | gb | ERR2513710 | HR-TB | lineage4.1.2.1 | gb | ERR2515022 | Sensitive | lineage3 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR2514215 | Other | lineage2.2.1 | gb | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR4820193 | Other | lineage3 | None | ERR2515230 | Sensitive | lineage4.8 | None | SRR5341470 | HR-TB | None | ERR4822138 | Other | lineage4.1.2.1 | None | SRR6045519 | HR-TB | None | SRR6046397 | Other | None | ERR4821616 | Other | lineage1.1.3.1 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR6044958 | Other | lineage4.4.1.1 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045957 | Other | lineage4.9 | None | SRR6046250 | Other | lineage4.9 | None | SRR7131152 | MDR-TB | lineage2.2.1 | None | ERR502524 | HR-TB | La2 | None | ERR294266 | HR-TB | None | ERR3275190 | Other | lineage3 | nl | SRR9971080 | RR-TB | lineage2.2.1 | None | ERR323053 | HR-TB | None | ERR323039 | HR-TB | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR037234 | Sensitive | lineage4.9 | None | ERR10796597 | Other | lineage4 | None | ERR1034652 | Other | None | ERR1035297 | MDR-TB | lineage4.3.4.1 | br | ERR10796632 | Other | lineage4.3.3 | None | ERR10796626 | Other | lineage4.1.2 | None | ERR108471 | HR-TB | lineage4 | None | ERR10796634 | Other | lineage4 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR10796635 | Other | lineage4 | None | ERR1213875 | Other | lineage4.3.3 | de | ERR1213873 | MDR-TB | lineage4.3.4.2.1 | rw | ERR4769555 | Other | La1.3 | None | ERR3797047 | HR-TB | lineage4 | None | ERR387051 | HR-TB | None | ERR4769418 | Other | La1.2 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769516 | Other | La1.3 | None | ERR4769518 | Sensitive | lineage4.9 | None | ERR4769552 | Other | La1.3 | None | ERR3283058 | Other | lineage4.9 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3797043 | HR-TB | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR4553729 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769406 | Other | lineage4.9 | None | ERR4769408 | Other | La1.3 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769506 | Sensitive | La1.3 | None | ERR4769514 | Other | La1.3 | None | ERR4769527 | Sensitive | lineage4.9 | None | ERR4769548 | Other | lineage4.9 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4798504 | Other | lineage3 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR4800670 | RR-TB | lineage1.1.2 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR6359070 | Other | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR736837 | Other | lineage4.9 | None | ERR736865 | HR-TB | None | ERR9787153 | Other | lineage6.1.3 | None | ERR987722 | HR-TB | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1172717 | Other | lineage4.9 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR1172310 | HR-TB | None | SRR1174897 | HR-TB | None | SRR1173788 | Other | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR13180204 | Sensitive | lineage3 | None | SRR13180363 | Sensitive | lineage4.1.2.1 | None | SRR13888750 | Other | La2 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR13180203 | Sensitive | lineage4.2.2.1 | None | SRR18912069 | Other | lineage4.1.2.1 | None | SRR18003028 | Sensitive | lineage2.2.1 | None | SRR17832802 | HR-TB | lineage3 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR19226954 | Sensitive | lineage4.1.2.1 | None | SRR18913779 | Other | lineage3 | None | SRR21469201 | Other | La1.7.1 | None | SRR21722120 | Sensitive | lineage4.1.2.1 | None | SRR21658550 | Other | lineage1.1.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR21469200 | Other | La1.7.1 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR21736961 | Sensitive | lineage2.2.1 | None |
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