TB-Profiler result

Run: SRR9971080
Summary

Run ID: SRR9971080

Sample name:

Date: 04-04-2023 23:10:32

Number of reads: 5560733

Percentage reads mapped: 35.92

Strain: lineage2.2.1

Drug-resistance: RR-TB

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Drug resistance: This table reports drug-resistance associated mutations found in known resistance genes
Drug Resistance Supporting mutations
Lineage Table: The lineage is inferred by analysing lineage specific SNPs
Lineage Family Main Spoligotype RDs Frequency
lineage2 East-Asian Beijing RD105 1.0
lineage2.2 East-Asian (Beijing) Beijing-RD207 RD105;RD207 1.0
lineage2.2.1 East-Asian (Beijing) Beijing-RD181 RD105;RD207;RD181 1.0
Drug resistance-Associated Mutations: This table reports mutations found in candidate resistance genes which have been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs
rpoB 761127 p.Ser441Ala missense_variant 0.41 rifampicin
rpoB 761139 p.His445Asn missense_variant 0.37 rifampicin
rrs 1473247 n.1402C>A non_coding_transcript_exon_variant 0.38 kanamycin, capreomycin, aminoglycosides, amikacin
rrs 1473329 n.1484G>T non_coding_transcript_exon_variant 0.29 kanamycin, capreomycin, aminoglycosides, amikacin
Non-Associated Mutations: This table reports mutations found in candidate resistance genes which have not been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction
gyrA 6676 c.-626T>G upstream_gene_variant 0.15
gyrA 6700 c.-602T>C upstream_gene_variant 0.16
gyrA 6703 c.-599G>C upstream_gene_variant 0.16
gyrA 6709 c.-593A>G upstream_gene_variant 0.17
gyrA 6724 c.-578G>C upstream_gene_variant 0.17
gyrA 6745 c.-557T>C upstream_gene_variant 0.16
gyrA 6760 c.-542G>C upstream_gene_variant 0.15
gyrA 6766 c.-536G>C upstream_gene_variant 0.15
gyrA 6793 c.-509T>C upstream_gene_variant 0.14
gyrB 6797 p.Gly520Ser missense_variant 0.14
gyrA 7362 p.Glu21Gln missense_variant 1.0
gyrA 7585 p.Ser95Thr missense_variant 1.0
gyrA 9304 p.Gly668Asp missense_variant 1.0
fgd1 491742 c.960T>C synonymous_variant 1.0
mshA 575907 p.Ala187Val missense_variant 0.98
mshA 576108 p.Ala254Gly missense_variant 0.23
ccsA 620625 p.Ile245Met missense_variant 1.0
rpoB 760101 c.295T>C synonymous_variant 0.15
rpoB 760118 c.312T>G synonymous_variant 0.15
rpoB 760121 c.315T>C synonymous_variant 0.15
rpoB 760130 p.Asp108Glu missense_variant 0.17
rpoB 760133 c.327C>G synonymous_variant 0.17
rpoB 760181 c.375T>G synonymous_variant 0.14
rpoB 760184 c.378A>G synonymous_variant 0.2
rpoB 760235 c.429T>C synonymous_variant 0.17
rpoB 760244 c.438G>C synonymous_variant 0.16
rpoB 760274 p.Glu156Asp missense_variant 0.23
rpoB 760283 c.477G>A synonymous_variant 0.15
rpoB 760298 c.492G>C synonymous_variant 0.22
rpoB 760310 c.504G>C synonymous_variant 0.18
rpoB 760328 c.522G>C synonymous_variant 0.18
rpoB 760340 c.534G>C synonymous_variant 0.19
rpoB 760361 c.555T>C synonymous_variant 0.22
rpoB 760368 p.Ser188Thr missense_variant 0.14
rpoB 760376 p.Asp190Glu missense_variant 0.21
rpoB 760382 c.576G>C synonymous_variant 0.2
rpoB 760400 c.594G>C synonymous_variant 0.18
rpoB 760407 p.Ser201Gly missense_variant 0.16
rpoB 760430 c.624T>C synonymous_variant 0.15
rpoB 760457 c.651C>T synonymous_variant 0.17
rpoB 760460 c.654G>C synonymous_variant 0.15
rpoB 760484 c.678A>G synonymous_variant 0.14
rpoB 760946 c.1140A>G synonymous_variant 0.15
rpoB 760973 c.1167G>C synonymous_variant 0.17
rpoB 760985 c.1179G>C synonymous_variant 0.22
rpoB 760991 c.1185G>C synonymous_variant 0.16
rpoB 760997 c.1191G>C synonymous_variant 0.27
rpoB 761006 c.1200C>G synonymous_variant 0.27
rpoB 761013 p.Val403Ile missense_variant 0.23
rpoB 761027 c.1221A>C synonymous_variant 0.34
rpoB 761036 c.1230G>C synonymous_variant 0.44
rpoB 761037 c.1231T>C synonymous_variant 0.44
rpoB 761046 p.Ile414Val missense_variant 0.31
rpoB 761051 c.1245G>A synonymous_variant 0.37
rpoB 761057 c.1251G>C synonymous_variant 0.46
rpoB 761084 c.1278C>A synonymous_variant 0.15
rpoB 761088 c.1282_1284delAGCinsTCG synonymous_variant 0.55
rpoB 761097 c.1291_1293delAGCinsTCG synonymous_variant 0.56
rpoB 761102 c.1296A>G synonymous_variant 0.56
rpoB 761126 c.1320G>C synonymous_variant 0.41
rpoB 761132 c.1326G>T synonymous_variant 0.56
rpoB 761133 c.1327T>C synonymous_variant 0.58
rpoB 761150 c.1344A>C synonymous_variant 0.6
rpoB 761153 c.1347G>C synonymous_variant 0.42
rpoB 761159 c.1353G>C synonymous_variant 0.38
rpoB 761162 c.1356G>C synonymous_variant 0.37
rpoB 761165 c.1359G>C synonymous_variant 0.48
rpoB 761178 c.1372_1374delTCAinsAGC synonymous_variant 0.33
rpoB 761189 c.1383T>C synonymous_variant 0.43
rpoB 761195 c.1389G>C synonymous_variant 0.43
rpoB 761196 p.Leu464Val missense_variant 0.32
rpoB 761213 c.1407G>C synonymous_variant 0.44
rpoB 761234 c.1428G>C synonymous_variant 0.4
rpoB 761249 c.1443A>G synonymous_variant 0.41
rpoB 761255 c.1449T>G synonymous_variant 0.37
rpoB 761258 c.1452G>A synonymous_variant 0.33
rpoB 761261 c.1455G>C synonymous_variant 0.35
rpoB 761264 c.1458C>G synonymous_variant 0.41
rpoB 761273 c.1467T>C synonymous_variant 0.34
rpoB 761288 c.1482G>C synonymous_variant 0.25
rpoB 761289 p.Ser495Ala missense_variant 0.15
rpoB 761292 p.Val496Ser missense_variant 0.15
rpoB 761296 p.Tyr497Phe missense_variant 0.15
rpoB 761303 c.1497G>C synonymous_variant 0.15
rpoB 761304 p.Val500Ile missense_variant 0.15
rpoB 761310 p.Pro502Ser missense_variant 0.16
rpoB 761318 c.1512G>C synonymous_variant 0.17
rpoB 761327 c.1521A>G synonymous_variant 0.23
rpoB 761345 c.1539G>C synonymous_variant 0.13
rpoB 761948 c.2142G>C synonymous_variant 0.14
rpoB 761954 c.2148C>G synonymous_variant 0.17
rpoB 762014 c.2208C>G synonymous_variant 0.22
rpoB 762053 c.2247T>C synonymous_variant 0.26
rpoB 762062 c.2256T>C synonymous_variant 0.26
rpoB 762065 c.2259T>C synonymous_variant 0.16
rpoB 762080 c.2274G>C synonymous_variant 0.16
rpoB 762086 c.2280G>C synonymous_variant 0.28
rpoB 762101 c.2295C>G synonymous_variant 0.28
rpoB 762114 p.Ile770Val missense_variant 0.27
rpoB 762128 c.2322G>C synonymous_variant 0.18
rpoB 762137 c.2331C>T synonymous_variant 0.27
rpoB 762140 c.2334G>C synonymous_variant 0.28
rpoB 762143 c.2337T>C synonymous_variant 0.3
rpoB 762149 c.2343G>C synonymous_variant 0.33
rpoB 762156 p.Val784Ile missense_variant 0.35
rpoB 762161 c.2355C>T synonymous_variant 0.16
rpoB 762167 c.2361T>C synonymous_variant 0.14
rpoB 762176 c.2370T>C synonymous_variant 0.27
rpoB 762180 p.Asp792Pro missense_variant 0.17
rpoB 762185 c.2379G>C synonymous_variant 0.41
rpoB 762189 p.Ile795Val missense_variant 0.18
rpoB 762194 c.2388G>C synonymous_variant 0.17
rpoB 762218 c.2412T>C synonymous_variant 0.34
rpoB 762231 p.Thr809Ser missense_variant 0.17
rpoB 762234 p.Pro810Ala missense_variant 0.17
rpoB 762245 c.2439G>C synonymous_variant 0.39
rpoB 762251 c.2445G>C synonymous_variant 0.18
rpoB 762254 c.2448T>C synonymous_variant 0.3
rpoB 762257 c.2451C>G synonymous_variant 0.3
rpoB 762264 p.Gly820Asn missense_variant 0.18
rpoB 762273 p.Ala823Ser missense_variant 0.19
rpoB 762284 c.2478G>C synonymous_variant 0.15
rpoB 762293 c.2487T>C synonymous_variant 0.24
rpoB 762299 c.2493G>C synonymous_variant 0.18
rpoB 762314 c.2508C>T synonymous_variant 0.16
rpoB 762317 c.2511A>G synonymous_variant 0.15
rpoB 762844 p.Phe1013Tyr missense_variant 0.23
rpoB 762849 p.Tyr1015Asp missense_variant 0.24
rpoB 762855 p.Val1017Ile missense_variant 0.26
rpoB 762858 p.Thr1018Ser missense_variant 0.3
rpoC 762863 c.-507T>C upstream_gene_variant 0.34
rpoB 762879 p.Met1025Leu missense_variant 0.31
rpoC 762899 c.-471G>C upstream_gene_variant 0.32
rpoC 762917 c.-453C>G upstream_gene_variant 0.44
rpoC 762923 c.-447C>G upstream_gene_variant 0.4
rpoC 762929 c.-441G>C upstream_gene_variant 0.47
rpoC 762959 c.-411G>C upstream_gene_variant 0.54
rpoC 762962 c.-408C>T upstream_gene_variant 0.46
rpoC 762983 c.-387C>A upstream_gene_variant 0.39
rpoC 762989 c.-381G>T upstream_gene_variant 0.42
rpoC 762995 c.-375G>C upstream_gene_variant 0.41
rpoB 763005 p.Cys1067Val missense_variant 0.32
rpoB 763014 p.Met1070Leu missense_variant 0.33
rpoB 763017 p.Gln1071Glu missense_variant 0.33
rpoC 763022 c.-348C>G upstream_gene_variant 0.41
rpoC 763028 c.-342T>C upstream_gene_variant 0.41
rpoC 763031 c.-339T>C upstream_gene_variant 1.0
rpoB 763038 p.Thr1078Ala missense_variant 0.33
rpoC 763052 c.-318G>C upstream_gene_variant 0.32
rpoC 763053 c.-317T>C upstream_gene_variant 0.45
rpoC 763067 c.-303C>G upstream_gene_variant 0.36
rpoC 763070 c.-300T>C upstream_gene_variant 0.39
rpoB 763075 p.Thr1090Ile missense_variant 0.34
rpoB 763077 p.Val1091Leu missense_variant 0.26
rpoC 763088 c.-282C>G upstream_gene_variant 0.39
rpoC 763094 c.-276G>C upstream_gene_variant 0.24
rpoC 763103 c.-267G>C upstream_gene_variant 0.27
rpoC 763414 c.45T>G synonymous_variant 0.14
rpoC 763430 c.61_63delAGGinsCGC synonymous_variant 0.15
rpoC 763433 p.Gln22Asn missense_variant 0.15
rpoC 763444 c.75T>C synonymous_variant 0.23
rpoC 763456 c.87A>G synonymous_variant 0.34
rpoC 763468 c.99G>C synonymous_variant 0.17
rpoC 763486 c.117T>C synonymous_variant 0.38
rpoC 763492 c.123G>C synonymous_variant 0.36
rpoC 763504 c.135C>A synonymous_variant 0.21
rpoC 763507 c.138G>C synonymous_variant 0.35
rpoC 763511 p.Cys48Gly missense_variant 0.21
rpoC 763517 p.Lys50Gln missense_variant 0.2
rpoC 763528 c.159G>A synonymous_variant 0.33
rpoC 763531 c.162G>C synonymous_variant 0.13
rpoC 763532 p.Thr55Ser missense_variant 0.23
rpoC 763537 c.168C>G synonymous_variant 0.13
rpoC 763546 c.177A>G synonymous_variant 0.43
rpoC 763551 p.Tyr61Ser missense_variant 0.24
rpoC 763570 c.201G>C synonymous_variant 0.46
rpoC 763573 c.204G>C synonymous_variant 0.46
rpoC 763589 p.Ile74Val missense_variant 0.25
rpoC 763609 c.240C>G synonymous_variant 0.19
rpoC 763622 p.Ala85Thr missense_variant 0.13
rpoC 763630 c.261G>C synonymous_variant 0.16
rpoC 763642 c.273G>C synonymous_variant 0.3
rpoC 763660 c.291T>C synonymous_variant 0.35
rpoC 763666 c.297G>C synonymous_variant 0.19
rpoC 763669 c.300C>G synonymous_variant 0.29
rpoC 763672 c.303C>G synonymous_variant 0.15
rpoC 763675 c.306C>G synonymous_variant 0.23
rpoC 763702 c.333C>G synonymous_variant 0.21
rpoC 763703 c.334_336delTCGinsAGC synonymous_variant 0.26
rpoC 763708 c.339G>T synonymous_variant 0.14
rpoC 763711 c.342G>C synonymous_variant 0.19
rpoC 763714 c.345G>C synonymous_variant 0.25
rpoC 763717 c.348T>C synonymous_variant 0.24
rpoC 763732 c.363C>T synonymous_variant 0.17
rpoC 763741 c.372C>T synonymous_variant 0.18
rpoC 763744 c.375G>C synonymous_variant 0.24
rpoC 764188 c.819A>G synonymous_variant 0.2
rpoC 764203 c.834G>C synonymous_variant 0.19
rpoC 764206 p.Asp279Glu missense_variant 0.19
rpoC 764207 p.Val280Thr missense_variant 0.19
rpoC 764239 c.870T>G synonymous_variant 0.27
rpoC 764242 c.873C>T synonymous_variant 0.14
rpoC 764245 c.876C>T synonymous_variant 0.14
rpoC 764254 c.885G>C synonymous_variant 0.3
rpoC 764257 c.888G>C synonymous_variant 0.17
rpoC 764263 c.894G>C synonymous_variant 0.31
rpoC 764266 c.897T>C synonymous_variant 0.3
rpoC 764269 c.900G>T synonymous_variant 0.21
rpoC 764278 c.909A>G synonymous_variant 0.34
rpoC 764284 c.915G>C synonymous_variant 0.14
rpoC 764296 c.927G>C synonymous_variant 0.14
rpoC 764308 c.939G>T synonymous_variant 0.24
rpoC 764320 c.951C>T synonymous_variant 0.34
rpoC 764353 c.984G>C synonymous_variant 0.35
rpoC 764365 c.996C>T synonymous_variant 0.32
rpoC 764368 c.999C>T synonymous_variant 0.15
rpoC 764371 c.1002G>T synonymous_variant 0.15
rpoC 764377 c.1008C>G synonymous_variant 0.17
rpoC 764387 c.1018T>C synonymous_variant 0.26
rpoC 764405 c.1036_1038delAGGinsCGC synonymous_variant 0.23
rpoC 764428 c.1059G>C synonymous_variant 0.14
rpoC 764431 c.1062G>C synonymous_variant 0.21
rpoC 764434 c.1065A>G synonymous_variant 0.21
rpoC 764435 c.1066_1068delAGGinsCGA synonymous_variant 0.21
rpoC 764449 c.1080G>C synonymous_variant 0.18
rpoC 764458 c.1089G>C synonymous_variant 0.27
rpoC 764461 c.1092A>G synonymous_variant 0.3
rpoC 764497 c.1128A>G synonymous_variant 0.31
rpoC 764506 c.1137C>T synonymous_variant 0.24
rpoC 764521 c.1152T>C synonymous_variant 0.34
rpoC 764524 c.1155C>T synonymous_variant 0.27
rpoC 764527 c.1158C>T synonymous_variant 0.28
rpoC 764530 c.1161C>T synonymous_variant 0.29
rpoC 764545 c.1176C>G synonymous_variant 0.38
rpoC 764548 c.1179G>T synonymous_variant 0.42
rpoC 764566 c.1197C>G synonymous_variant 0.37
rpoC 764575 c.1206T>G synonymous_variant 0.46
rpoC 764602 c.1233C>T synonymous_variant 0.42
rpoC 764605 c.1236G>C synonymous_variant 0.41
rpoC 764611 c.1242G>T synonymous_variant 0.28
rpoC 764632 c.1263T>C synonymous_variant 0.5
rpoC 764650 c.1281G>T synonymous_variant 0.52
rpoC 764660 p.Val431Ile missense_variant 0.27
rpoC 764665 c.1296C>G synonymous_variant 0.28
rpoC 764668 c.1299C>T synonymous_variant 0.28
rpoC 764701 c.1332C>G synonymous_variant 0.15
rpoC 764706 p.Leu446His missense_variant 0.35
rpoC 764716 c.1347G>C synonymous_variant 0.16
rpoC 764719 c.1350G>A synonymous_variant 0.21
rpoC 764740 p.Met457Ile missense_variant 0.31
rpoC 764746 c.1377G>C synonymous_variant 0.36
rpoC 764750 p.Val461Ile missense_variant 0.26
rpoC 764758 c.1389C>G synonymous_variant 0.32
rpoC 764760 p.Asn464Ser missense_variant 0.25
rpoC 764764 c.1395T>C synonymous_variant 0.46
rpoC 764767 c.1398G>T synonymous_variant 0.26
rpoC 764780 p.Ser471Ala missense_variant 0.28
rpoC 764797 c.1428G>C synonymous_variant 0.2
rpoC 764803 c.1434C>T synonymous_variant 0.32
rpoC 764804 p.Gln479Ser missense_variant 0.18
rpoC 764809 c.1440C>T synonymous_variant 0.2
rpoC 764812 c.1443C>G synonymous_variant 0.29
rpoC 764815 c.1446A>G synonymous_variant 0.39
rpoC 764824 c.1455T>C synonymous_variant 0.28
rpoC 764827 c.1458G>C synonymous_variant 0.21
rpoC 764833 c.1464A>G synonymous_variant 0.15
rpoC 764858 c.1489T>C synonymous_variant 0.27
rpoC 764869 c.1500C>T synonymous_variant 0.21
rpoC 764887 c.1518G>C synonymous_variant 0.17
rpoC 764888 c.1519_1521delTTGinsCTC synonymous_variant 0.21
rpoC 764911 c.1542A>G synonymous_variant 0.16
rpoC 764912 p.Met515Gln missense_variant 0.16
rpoC 764935 c.1566T>C synonymous_variant 0.2
rpoC 764948 c.1579T>C synonymous_variant 0.2
rpoC 764968 c.1599T>C synonymous_variant 0.18
rpoC 765019 c.1650A>G synonymous_variant 0.15
rpoC 765034 c.1665T>C synonymous_variant 0.16
rpoC 765040 c.1671T>C synonymous_variant 0.16
rpoC 765041 c.1672T>C synonymous_variant 0.16
rpoC 765047 c.1678T>C synonymous_variant 0.16
rpoC 765055 c.1686C>G synonymous_variant 0.17
rpoC 766915 p.Asp1182Glu missense_variant 0.16
rpoC 766942 c.3573C>T synonymous_variant 0.17
rpoC 766945 c.3576A>C synonymous_variant 0.16
rpoC 766948 c.3579G>C synonymous_variant 0.16
rpoC 766963 c.3594T>C synonymous_variant 0.14
rpoC 766978 c.3609C>A synonymous_variant 0.17
rpoC 766996 c.3627C>T synonymous_variant 0.21
rpoC 767074 c.3705T>C synonymous_variant 0.19
rpoC 767093 c.3724_3726delAGCinsTCG synonymous_variant 0.16
rpoC 767098 c.3729T>C synonymous_variant 0.21
rpoC 767104 c.3735C>G synonymous_variant 0.2
rpoC 767106 p.Asn1246Ile missense_variant 0.16
rpoC 767113 c.3744G>C synonymous_variant 0.16
rpoC 767119 c.3750A>G synonymous_variant 0.2
rpoC 767152 c.3783T>C synonymous_variant 0.13
rpoC 767158 c.3789T>C synonymous_variant 0.16
rpoC 767185 c.3816G>T synonymous_variant 0.13
mmpL5 775639 p.Ile948Val missense_variant 1.0
mmpL5 776100 p.Thr794Ile missense_variant 1.0
mmpL5 776182 p.Asp767Asn missense_variant 1.0
mmpS5 779615 c.-710C>G upstream_gene_variant 1.0
rpsL 781395 c.-165T>C upstream_gene_variant 1.0
rpsL 781572 p.Gln5Lys missense_variant 0.14
rpsL 781595 c.36T>C synonymous_variant 0.15
rpsL 781598 c.39G>C synonymous_variant 0.15
rpsL 781605 p.Ile16Val missense_variant 0.14
rpsL 781608 p.Ser17Ala missense_variant 0.14
rpsL 781655 c.96T>C synonymous_variant 0.2
rpsL 781658 c.99A>G synonymous_variant 0.24
rpsL 781664 c.105C>T synonymous_variant 0.14
rpsL 781670 c.111G>C synonymous_variant 0.14
rpsL 781682 c.123T>C synonymous_variant 0.35
rpsL 781685 c.126G>C synonymous_variant 0.15
rpsL 781706 c.147T>C synonymous_variant 0.21
rpsL 781709 c.150G>C synonymous_variant 0.21
rpsL 781715 c.156T>C synonymous_variant 0.28
rpsL 781728 c.169T>C synonymous_variant 0.27
rpsL 781751 c.192G>C synonymous_variant 0.36
rpsL 781754 c.195G>C synonymous_variant 0.26
rpsL 781760 c.201T>C synonymous_variant 0.41
rpsL 781766 c.207C>T synonymous_variant 0.44
rpsL 781802 c.243G>C synonymous_variant 0.47
rpsL 781805 c.246G>C synonymous_variant 0.47
rpsL 781814 c.255C>T synonymous_variant 0.15
rpsL 781817 c.258G>T synonymous_variant 0.48
rpsL 781829 c.270G>C synonymous_variant 0.43
rpsL 781835 c.276T>C synonymous_variant 0.3
rpsL 781838 c.279G>C synonymous_variant 0.28
rpsL 781851 p.Ile98Val missense_variant 0.27
rpsL 781859 c.300T>C synonymous_variant 0.42
rpsL 781860 p.Ser101Ala missense_variant 0.28
rpsL 781868 c.309T>C synonymous_variant 0.46
rpsL 781871 c.312G>C synonymous_variant 0.48
rpsL 781876 p.Gly106Ala missense_variant 0.26
rpsL 781892 c.333A>G synonymous_variant 0.43
rpsL 781898 c.339A>T synonymous_variant 0.26
rpsL 781901 c.342C>T synonymous_variant 0.17
rpsL 781907 c.348T>C synonymous_variant 0.28
rpsL 781916 c.357T>G synonymous_variant 0.3
rplC 800618 c.-191T>C upstream_gene_variant 0.2
rplC 800648 c.-161A>G upstream_gene_variant 0.2
rplC 800651 c.-158G>C upstream_gene_variant 0.16
rplC 800654 c.-155T>C upstream_gene_variant 0.19
rplC 800672 c.-137G>C upstream_gene_variant 0.21
rplC 800693 c.-116A>G upstream_gene_variant 0.15
rplC 800703 c.-106T>C upstream_gene_variant 0.21
rplC 800720 c.-89T>C upstream_gene_variant 0.21
rplC 800723 c.-86C>G upstream_gene_variant 0.21
rplC 800738 c.-71T>C upstream_gene_variant 0.2
fbiC 1304703 c.1773C>G synonymous_variant 0.15
fbiC 1304715 c.1785G>C synonymous_variant 0.14
fbiC 1304724 c.1794A>G synonymous_variant 0.15
fbiC 1304727 c.1797A>G synonymous_variant 0.14
Rv1258c 1406760 c.580_581insC frameshift_variant 1.0
rrs 1471659 n.-187C>T upstream_gene_variant 1.0
rrs 1471918 n.73A>T non_coding_transcript_exon_variant 0.24
rrs 1471923 n.78T>C non_coding_transcript_exon_variant 0.25
rrs 1471925 n.80T>C non_coding_transcript_exon_variant 0.26
rrs 1471932 n.87A>G non_coding_transcript_exon_variant 0.26
rrs 1471934 n.89A>G non_coding_transcript_exon_variant 0.28
rrs 1471938 n.93T>A non_coding_transcript_exon_variant 0.25
rrs 1471985 n.140T>C non_coding_transcript_exon_variant 0.24
rrs 1471986 n.141C>T non_coding_transcript_exon_variant 0.33
rrs 1472075 n.230A>G non_coding_transcript_exon_variant 0.3
rrs 1472092 n.247C>G non_coding_transcript_exon_variant 0.16
rrs 1472094 n.249T>A non_coding_transcript_exon_variant 0.16
rrs 1472102 n.257G>A non_coding_transcript_exon_variant 0.19
rrs 1472106 n.261G>A non_coding_transcript_exon_variant 0.54
rrs 1472108 n.263C>T non_coding_transcript_exon_variant 0.38
rrs 1472112 n.267C>T non_coding_transcript_exon_variant 0.17
rrs 1472113 n.268T>C non_coding_transcript_exon_variant 0.17
rrs 1472120 n.275G>C non_coding_transcript_exon_variant 0.18
rrs 1472122 n.277G>T non_coding_transcript_exon_variant 0.2
rrs 1472148 n.303T>C non_coding_transcript_exon_variant 0.35
rrs 1472150 n.305T>A non_coding_transcript_exon_variant 0.7
rrs 1472172 n.327T>C non_coding_transcript_exon_variant 0.66
rrs 1472225 n.380C>A non_coding_transcript_exon_variant 0.34
rrs 1472240 n.395G>A non_coding_transcript_exon_variant 0.22
rrs 1472251 n.406G>A non_coding_transcript_exon_variant 0.65
rrs 1472286 n.441C>G non_coding_transcript_exon_variant 0.5
rrs 1472289 n.444T>G non_coding_transcript_exon_variant 0.43
rrs 1472290 n.445C>G non_coding_transcript_exon_variant 0.42
rrs 1472297 n.453_465delGTCCGGGTTCTCT non_coding_transcript_exon_variant 0.47
rrs 1472312 n.467_468insA non_coding_transcript_exon_variant 0.38
rrs 1472315 n.470T>G non_coding_transcript_exon_variant 0.44
rrs 1472324 n.479G>C non_coding_transcript_exon_variant 0.4
rrs 1472325 n.480G>C non_coding_transcript_exon_variant 0.37
rrs 1472328 n.483G>C non_coding_transcript_exon_variant 0.44
rrs 1472422 n.577T>C non_coding_transcript_exon_variant 0.37
rrs 1472435 n.590T>C non_coding_transcript_exon_variant 0.35
rrs 1472438 n.593T>C non_coding_transcript_exon_variant 0.35
rrs 1472446 n.601T>A non_coding_transcript_exon_variant 0.47
rrs 1472449 n.604C>T non_coding_transcript_exon_variant 0.36
rrs 1472450 n.605A>G non_coding_transcript_exon_variant 0.36
rrs 1472451 n.606C>G non_coding_transcript_exon_variant 0.36
rrs 1472456 n.611T>C non_coding_transcript_exon_variant 0.36
rrs 1472460 n.615T>C non_coding_transcript_exon_variant 0.35
rrs 1472461 n.616G>C non_coding_transcript_exon_variant 0.36
rrs 1472462 n.617T>C non_coding_transcript_exon_variant 0.36
rrs 1472463 n.618G>A non_coding_transcript_exon_variant 0.37
rrs 1472464 n.619A>G non_coding_transcript_exon_variant 0.14
rrs 1472467 n.622G>T non_coding_transcript_exon_variant 0.37
rrs 1472489 n.644A>T non_coding_transcript_exon_variant 0.46
rrs 1472507 n.662C>A non_coding_transcript_exon_variant 0.17
rrs 1472530 n.685G>A non_coding_transcript_exon_variant 0.39
rrs 1472558 n.713G>A non_coding_transcript_exon_variant 0.21
rrs 1472569 n.724G>A non_coding_transcript_exon_variant 0.2
rrs 1472571 n.726G>T non_coding_transcript_exon_variant 0.2
rrs 1472581 n.736A>C non_coding_transcript_exon_variant 0.2
rrs 1472612 n.767G>T non_coding_transcript_exon_variant 0.45
rrs 1472655 n.810G>T non_coding_transcript_exon_variant 0.28
rrs 1472660 n.815T>C non_coding_transcript_exon_variant 0.73
rrs 1472661 n.816A>G non_coding_transcript_exon_variant 0.76
rrs 1472666 n.821G>A non_coding_transcript_exon_variant 0.24
rrs 1472673 n.828T>G non_coding_transcript_exon_variant 0.24
rrs 1472674 n.829T>A non_coding_transcript_exon_variant 0.23
rrs 1472675 n.830T>C non_coding_transcript_exon_variant 0.24
rrs 1472677 n.832C>A non_coding_transcript_exon_variant 0.24
rrs 1472682 n.837T>A non_coding_transcript_exon_variant 0.72
rrs 1472683 n.838T>C non_coding_transcript_exon_variant 0.73
rrs 1472686 n.841G>T non_coding_transcript_exon_variant 0.23
rrs 1472687 n.842A>T non_coding_transcript_exon_variant 0.24
rrs 1472694 n.849C>T non_coding_transcript_exon_variant 0.24
rrs 1472697 n.852T>C non_coding_transcript_exon_variant 0.27
rrs 1472713 n.868T>C non_coding_transcript_exon_variant 0.74
rrs 1472714 n.869A>G non_coding_transcript_exon_variant 0.72
rrs 1472836 n.991G>A non_coding_transcript_exon_variant 0.32
rrs 1472837 n.992C>T non_coding_transcript_exon_variant 0.29
rrs 1472840 n.995A>C non_coding_transcript_exon_variant 0.31
rrs 1472858 n.1013G>C non_coding_transcript_exon_variant 0.35
rrs 1472860 n.1015C>G non_coding_transcript_exon_variant 0.35
rrs 1472861 n.1016G>C non_coding_transcript_exon_variant 0.31
rrs 1472862 n.1017T>C non_coding_transcript_exon_variant 0.31
rrs 1472863 n.1018T>C non_coding_transcript_exon_variant 0.31
rrs 1472873 n.1028C>T non_coding_transcript_exon_variant 0.32
rrs 1472875 n.1030T>G non_coding_transcript_exon_variant 0.32
rrs 1472878 n.1033G>A non_coding_transcript_exon_variant 0.32
rrs 1472880 n.1035G>A non_coding_transcript_exon_variant 0.34
rrs 1472895 n.1050C>T non_coding_transcript_exon_variant 0.16
rrs 1472952 n.1107T>C non_coding_transcript_exon_variant 0.33
rrs 1472955 n.1110C>T non_coding_transcript_exon_variant 0.33
rrs 1472956 n.1111T>C non_coding_transcript_exon_variant 0.76
rrs 1472957 n.1112C>T non_coding_transcript_exon_variant 0.76
rrs 1472958 n.1113A>G non_coding_transcript_exon_variant 0.37
rrs 1472969 n.1124A>G non_coding_transcript_exon_variant 0.77
rrs 1472978 n.1133T>C non_coding_transcript_exon_variant 0.76
rrs 1472982 n.1137G>A non_coding_transcript_exon_variant 0.33
rrs 1472987 n.1142G>A non_coding_transcript_exon_variant 0.33
rrs 1472988 n.1143T>C non_coding_transcript_exon_variant 0.42
rrs 1472989 n.1144G>A non_coding_transcript_exon_variant 0.78
rrs 1472990 n.1145A>G non_coding_transcript_exon_variant 0.78
rrs 1473026 n.1181T>C non_coding_transcript_exon_variant 0.45
rrs 1473035 n.1190G>A non_coding_transcript_exon_variant 0.34
rrs 1473055 n.1210C>T non_coding_transcript_exon_variant 0.33
rrs 1473056 n.1211A>T non_coding_transcript_exon_variant 0.34
rrs 1473066 n.1221A>G non_coding_transcript_exon_variant 0.36
rrs 1473088 n.1243A>G non_coding_transcript_exon_variant 0.39
rrs 1473097 n.1252G>A non_coding_transcript_exon_variant 0.35
rrs 1473100 n.1255G>A non_coding_transcript_exon_variant 0.74
rrs 1473104 n.1259C>T non_coding_transcript_exon_variant 0.78
rrs 1473105 n.1260G>A non_coding_transcript_exon_variant 0.34
rrs 1473110 n.1265T>G non_coding_transcript_exon_variant 0.77
rrs 1473111 n.1266A>G non_coding_transcript_exon_variant 0.78
rrs 1473121 n.1276T>C non_coding_transcript_exon_variant 0.73
rrs 1473122 n.1277T>A non_coding_transcript_exon_variant 0.38
rrs 1473123 n.1278A>T non_coding_transcript_exon_variant 0.4
rrs 1473145 n.1300C>T non_coding_transcript_exon_variant 0.39
rrs 1473147 n.1302G>A non_coding_transcript_exon_variant 0.38
rrs 1473164 n.1319C>T non_coding_transcript_exon_variant 0.38
rrs 1473166 n.1321G>A non_coding_transcript_exon_variant 0.39
rrs 1473276 n.1431A>G non_coding_transcript_exon_variant 0.77
rrs 1473283 n.1438T>C non_coding_transcript_exon_variant 0.34
rrs 1473290 n.1445C>T non_coding_transcript_exon_variant 0.73
rrs 1473291 n.1446_1447insT non_coding_transcript_exon_variant 0.7
rrs 1473301 n.1456T>C non_coding_transcript_exon_variant 0.72
rrs 1473319 n.1474C>T non_coding_transcript_exon_variant 0.31
rrs 1473324 n.1479G>A non_coding_transcript_exon_variant 0.3
rrl 1473717 n.60G>A non_coding_transcript_exon_variant 0.13
rrl 1473731 n.74T>A non_coding_transcript_exon_variant 0.18
rrl 1473756 n.99G>T non_coding_transcript_exon_variant 0.24
rrl 1473757 n.100T>G non_coding_transcript_exon_variant 0.23
rrl 1473758 n.101G>A non_coding_transcript_exon_variant 0.24
rrl 1473770 n.113T>G non_coding_transcript_exon_variant 0.45
rrl 1473791 n.134A>C non_coding_transcript_exon_variant 0.36
rrl 1473792 n.135C>A non_coding_transcript_exon_variant 0.34
rrl 1473793 n.136G>C non_coding_transcript_exon_variant 0.35
rrl 1473802 n.145C>G non_coding_transcript_exon_variant 0.34
rrl 1473803 n.146G>T non_coding_transcript_exon_variant 0.34
rrl 1473804 n.147T>G non_coding_transcript_exon_variant 0.34
rrl 1473806 n.149C>T non_coding_transcript_exon_variant 0.45
rrl 1473814 n.157A>G non_coding_transcript_exon_variant 0.4
rrl 1473815 n.158T>C non_coding_transcript_exon_variant 0.41
rrl 1473830 n.173T>C non_coding_transcript_exon_variant 0.45
rrl 1473832 n.175C>T non_coding_transcript_exon_variant 0.5
rrl 1473833 n.176_177insT non_coding_transcript_exon_variant 0.48
rrl 1473844 n.187C>T non_coding_transcript_exon_variant 0.44
rrl 1473870 n.213G>A non_coding_transcript_exon_variant 0.37
rrl 1473871 n.214T>C non_coding_transcript_exon_variant 0.36
rrl 1473876 n.219G>A non_coding_transcript_exon_variant 0.41
rrl 1473898 n.241C>T non_coding_transcript_exon_variant 0.31
rrl 1473899 n.242A>G non_coding_transcript_exon_variant 0.29
rrl 1473916 n.259C>A non_coding_transcript_exon_variant 0.14
rrl 1474135 n.478G>A non_coding_transcript_exon_variant 0.25
rrl 1474140 n.483C>T non_coding_transcript_exon_variant 0.29
rrl 1474151 n.494C>T non_coding_transcript_exon_variant 0.31
rrl 1474153 n.496C>T non_coding_transcript_exon_variant 0.28
rrl 1474166 n.509G>A non_coding_transcript_exon_variant 0.32
rrl 1474174 n.517A>G non_coding_transcript_exon_variant 0.28
rrl 1474183 n.526T>C non_coding_transcript_exon_variant 0.37
rrl 1474184 n.527C>T non_coding_transcript_exon_variant 0.31
rrl 1474186 n.529A>G non_coding_transcript_exon_variant 0.24
rrl 1474201 n.544T>C non_coding_transcript_exon_variant 0.4
rrl 1474218 n.561T>A non_coding_transcript_exon_variant 0.5
rrl 1474220 n.563G>A non_coding_transcript_exon_variant 0.31
rrl 1474249 n.592G>T non_coding_transcript_exon_variant 0.66
rrl 1474265 n.608G>T non_coding_transcript_exon_variant 0.22
rrl 1474266 n.609T>C non_coding_transcript_exon_variant 0.38
rrl 1474269 n.612C>T non_coding_transcript_exon_variant 0.6
rrl 1474275 n.618T>A non_coding_transcript_exon_variant 0.22
rrl 1474280 n.623C>T non_coding_transcript_exon_variant 0.22
rrl 1474281 n.624A>G non_coding_transcript_exon_variant 0.22
rrl 1474305 n.648G>T non_coding_transcript_exon_variant 0.22
rrl 1474306 n.649A>T non_coding_transcript_exon_variant 0.39
rrl 1474310 n.655dupG non_coding_transcript_exon_variant 0.49
rrl 1474316 n.659T>C non_coding_transcript_exon_variant 0.22
rrl 1474317 n.660G>A non_coding_transcript_exon_variant 0.22
rrl 1474348 n.691C>T non_coding_transcript_exon_variant 0.6
rrl 1474351 n.694G>C non_coding_transcript_exon_variant 0.59
rrl 1474353 n.696A>G non_coding_transcript_exon_variant 0.41
rrl 1474354 n.697C>T non_coding_transcript_exon_variant 0.17
rrl 1474359 n.702C>G non_coding_transcript_exon_variant 0.17
rrl 1474362 n.705A>G non_coding_transcript_exon_variant 0.63
rrl 1474376 n.719T>A non_coding_transcript_exon_variant 0.13
rrl 1474387 n.730C>T non_coding_transcript_exon_variant 0.53
rrl 1474402 n.745T>C non_coding_transcript_exon_variant 0.39
rrl 1474439 n.782A>T non_coding_transcript_exon_variant 0.38
rrl 1474447 n.790G>A non_coding_transcript_exon_variant 0.41
rrl 1474454 n.797G>A non_coding_transcript_exon_variant 0.46
rrl 1474466 n.809G>A non_coding_transcript_exon_variant 0.14
rrl 1474476 n.819C>T non_coding_transcript_exon_variant 0.21
rrl 1474488 n.831G>T non_coding_transcript_exon_variant 0.27
rrl 1474496 n.839C>A non_coding_transcript_exon_variant 0.69
rrl 1474497 n.840G>C non_coding_transcript_exon_variant 0.69
rrl 1474506 n.849C>G non_coding_transcript_exon_variant 0.7
rrl 1474507 n.850G>T non_coding_transcript_exon_variant 0.7
rrl 1474516 n.859C>A non_coding_transcript_exon_variant 0.36
rrl 1474537 n.880G>A non_coding_transcript_exon_variant 0.73
rrl 1474558 n.901G>A non_coding_transcript_exon_variant 0.43
rrl 1474583 n.926C>T non_coding_transcript_exon_variant 0.41
rrl 1474601 n.944C>T non_coding_transcript_exon_variant 0.41
rrl 1474626 n.969T>C non_coding_transcript_exon_variant 0.34
rrl 1474632 n.975G>T non_coding_transcript_exon_variant 0.7
rrl 1474636 n.979A>T non_coding_transcript_exon_variant 0.38
rrl 1474637 n.980C>T non_coding_transcript_exon_variant 0.38
rrl 1474638 n.981C>G non_coding_transcript_exon_variant 0.55
rrl 1474639 n.982G>C non_coding_transcript_exon_variant 0.66
rrl 1474640 n.983C>T non_coding_transcript_exon_variant 0.26
rrl 1474673 n.1016T>C non_coding_transcript_exon_variant 0.63
rrl 1474675 n.1018C>A non_coding_transcript_exon_variant 0.26
rrl 1474676 n.1019T>A non_coding_transcript_exon_variant 0.62
rrl 1474722 n.1065T>C non_coding_transcript_exon_variant 0.53
rrl 1474723 n.1066G>A non_coding_transcript_exon_variant 0.2
rrl 1474734 n.1077G>T non_coding_transcript_exon_variant 0.35
rrl 1474736 n.1079C>T non_coding_transcript_exon_variant 0.25
rrl 1474749 n.1092C>T non_coding_transcript_exon_variant 0.61
rrl 1474751 n.1094G>A non_coding_transcript_exon_variant 0.26
rrl 1474753 n.1097delC non_coding_transcript_exon_variant 0.52
rrl 1474760 n.1103A>G non_coding_transcript_exon_variant 0.68
rrl 1474770 n.1113G>A non_coding_transcript_exon_variant 0.27
rrl 1474777 n.1120T>C non_coding_transcript_exon_variant 0.26
rrl 1474779 n.1122G>A non_coding_transcript_exon_variant 0.26
rrl 1474782 n.1125G>A non_coding_transcript_exon_variant 0.26
rrl 1474783 n.1126G>A non_coding_transcript_exon_variant 0.26
rrl 1474790 n.1133C>T non_coding_transcript_exon_variant 0.31
rrl 1474794 n.1137C>T non_coding_transcript_exon_variant 0.75
rrl 1474800 n.1143T>C non_coding_transcript_exon_variant 0.33
rrl 1474803 n.1146G>A non_coding_transcript_exon_variant 0.34
rrl 1474812 n.1155G>A non_coding_transcript_exon_variant 0.41
rrl 1474823 n.1166C>G non_coding_transcript_exon_variant 0.63
rrl 1474824 n.1167A>G non_coding_transcript_exon_variant 0.31
rrl 1474827 n.1170C>T non_coding_transcript_exon_variant 0.3
rrl 1474830 n.1173A>G non_coding_transcript_exon_variant 0.41
rrl 1474831 n.1174A>C non_coding_transcript_exon_variant 0.3
rrl 1474903 n.1246T>C non_coding_transcript_exon_variant 0.26
rrl 1474904 n.1247G>C non_coding_transcript_exon_variant 0.46
rrl 1474905 n.1248T>C non_coding_transcript_exon_variant 0.17
rrl 1474913 n.1256T>C non_coding_transcript_exon_variant 0.43
rrl 1474920 n.1263G>A non_coding_transcript_exon_variant 0.17
rrl 1474932 n.1275C>T non_coding_transcript_exon_variant 0.2
rrl 1475060 n.1404delC non_coding_transcript_exon_variant 0.38
rrl 1475065 n.1408G>A non_coding_transcript_exon_variant 0.35
rrl 1475067 n.1410A>G non_coding_transcript_exon_variant 0.36
rrl 1475068 n.1411A>G non_coding_transcript_exon_variant 0.14
rrl 1475076 n.1419C>A non_coding_transcript_exon_variant 0.36
rrl 1475078 n.1421T>C non_coding_transcript_exon_variant 0.13
rrl 1475079 n.1422T>C non_coding_transcript_exon_variant 0.35
rrl 1475081 n.1424C>T non_coding_transcript_exon_variant 0.35
rrl 1475084 n.1427G>T non_coding_transcript_exon_variant 0.13
rrl 1475090 n.1433A>T non_coding_transcript_exon_variant 0.21
rrl 1475104 n.1447T>A non_coding_transcript_exon_variant 0.15
rrl 1475113 n.1456C>T non_coding_transcript_exon_variant 0.2
rrl 1475114 n.1457C>T non_coding_transcript_exon_variant 0.36
rrl 1475116 n.1459G>A non_coding_transcript_exon_variant 0.35
rrl 1475124 n.1467A>T non_coding_transcript_exon_variant 0.15
rrl 1475129 n.1472G>A non_coding_transcript_exon_variant 0.15
rrl 1475419 n.1762C>T non_coding_transcript_exon_variant 0.21
rrl 1475422 n.1765A>G non_coding_transcript_exon_variant 0.16
rrl 1475429 n.1772G>A non_coding_transcript_exon_variant 0.3
rrl 1475443 n.1786G>A non_coding_transcript_exon_variant 0.3
rrl 1475452 n.1795C>A non_coding_transcript_exon_variant 0.39
rrl 1475460 n.1803A>G non_coding_transcript_exon_variant 0.4
rrl 1475480 n.1823A>T non_coding_transcript_exon_variant 0.41
rrl 1475481 n.1824C>T non_coding_transcript_exon_variant 0.34
rrl 1475482 n.1825A>T non_coding_transcript_exon_variant 0.35
rrl 1475526 n.1869C>A non_coding_transcript_exon_variant 0.46
rrl 1475531 n.1874C>T non_coding_transcript_exon_variant 0.46
rrl 1475538 n.1881T>A non_coding_transcript_exon_variant 0.39
rrl 1475539 n.1882A>T non_coding_transcript_exon_variant 0.38
rrl 1475550 n.1893A>G non_coding_transcript_exon_variant 0.37
rrl 1475655 n.1998T>A non_coding_transcript_exon_variant 0.2
rrl 1475659 n.2002G>A non_coding_transcript_exon_variant 0.33
rrl 1475692 n.2035G>C non_coding_transcript_exon_variant 0.23
rrl 1475699 n.2042C>T non_coding_transcript_exon_variant 0.31
rrl 1475751 n.2094C>A non_coding_transcript_exon_variant 0.31
rrl 1475752 n.2095C>G non_coding_transcript_exon_variant 0.31
rrl 1475753 n.2096C>G non_coding_transcript_exon_variant 0.67
rrl 1475763 n.2106C>T non_coding_transcript_exon_variant 0.39
rrl 1475764 n.2107A>T non_coding_transcript_exon_variant 0.32
rrl 1475765 n.2108A>T non_coding_transcript_exon_variant 0.32
rrl 1475766 n.2109G>T non_coding_transcript_exon_variant 0.54
rrl 1475769 n.2112T>C non_coding_transcript_exon_variant 0.68
rrl 1475775 n.2118G>T non_coding_transcript_exon_variant 0.69
rrl 1475776 n.2119G>C non_coding_transcript_exon_variant 0.31
rrl 1475881 n.2224T>C non_coding_transcript_exon_variant 0.35
rrl 1475883 n.2226A>T non_coding_transcript_exon_variant 0.37
rrl 1475884 n.2227A>G non_coding_transcript_exon_variant 0.72
rrl 1475896 n.2239A>G non_coding_transcript_exon_variant 0.34
rrl 1475897 n.2240T>C non_coding_transcript_exon_variant 0.71
rrl 1475898 n.2241A>G non_coding_transcript_exon_variant 0.34
rrl 1475899 n.2242G>A non_coding_transcript_exon_variant 0.35
rrl 1475916 n.2259C>T non_coding_transcript_exon_variant 0.36
rrl 1475943 n.2286G>A non_coding_transcript_exon_variant 0.31
rrl 1475952 n.2295A>G non_coding_transcript_exon_variant 0.28
rrl 1475963 n.2306G>T non_coding_transcript_exon_variant 0.26
rrl 1475970 n.2313C>T non_coding_transcript_exon_variant 0.23
rrl 1475975 n.2318C>T non_coding_transcript_exon_variant 0.62
rrl 1475977 n.2320A>G non_coding_transcript_exon_variant 0.61
rrl 1475978 n.2321C>T non_coding_transcript_exon_variant 0.19
rrl 1475988 n.2331A>G non_coding_transcript_exon_variant 0.64
rrl 1475997 n.2340A>T non_coding_transcript_exon_variant 0.56
rrl 1476030 n.2373A>G non_coding_transcript_exon_variant 0.32
rrl 1476032 n.2375C>G non_coding_transcript_exon_variant 0.31
rrl 1476033 n.2376T>G non_coding_transcript_exon_variant 0.32
rrl 1476034 n.2377C>G non_coding_transcript_exon_variant 0.3
rrl 1476035 n.2378G>C non_coding_transcript_exon_variant 0.31
rrl 1476044 n.2387T>G non_coding_transcript_exon_variant 0.3
rrl 1476045 n.2388G>T non_coding_transcript_exon_variant 0.29
rrl 1476046 n.2389G>T non_coding_transcript_exon_variant 0.3
rrl 1476047 n.2390G>C non_coding_transcript_exon_variant 0.29
rrl 1476049 n.2392C>T non_coding_transcript_exon_variant 0.32
rrl 1476086 n.2429G>A non_coding_transcript_exon_variant 0.49
rrl 1476099 n.2442A>G non_coding_transcript_exon_variant 0.48
rrl 1476103 n.2446C>A non_coding_transcript_exon_variant 0.47
rrl 1476105 n.2450delA non_coding_transcript_exon_variant 0.46
rrl 1476110 n.2453G>T non_coding_transcript_exon_variant 0.47
rrl 1476115 n.2458T>C non_coding_transcript_exon_variant 0.56
rrl 1476130 n.2473G>A non_coding_transcript_exon_variant 0.19
rrl 1476131 n.2474C>T non_coding_transcript_exon_variant 0.63
rrl 1476160 n.2503T>C non_coding_transcript_exon_variant 0.61
rrl 1476165 n.2508T>A non_coding_transcript_exon_variant 0.27
rrl 1476194 n.2537A>G non_coding_transcript_exon_variant 0.37
rrl 1476200 n.2543A>T non_coding_transcript_exon_variant 0.66
rrl 1476201 n.2544C>T non_coding_transcript_exon_variant 0.71
rrl 1476214 n.2557G>T non_coding_transcript_exon_variant 0.72
rrl 1476221 n.2564T>C non_coding_transcript_exon_variant 0.33
rrl 1476224 n.2567A>G non_coding_transcript_exon_variant 0.72
rrl 1476245 n.2588C>T non_coding_transcript_exon_variant 0.69
rrl 1476252 n.2595T>G non_coding_transcript_exon_variant 0.75
rrl 1476256 n.2599A>G non_coding_transcript_exon_variant 0.36
rrl 1476260 n.2603A>G non_coding_transcript_exon_variant 0.78
rrl 1476281 n.2624T>C non_coding_transcript_exon_variant 0.75
rrl 1476295 n.2638C>G non_coding_transcript_exon_variant 0.34
rrl 1476296 n.2639C>T non_coding_transcript_exon_variant 0.34
rrl 1476297 n.2640C>G non_coding_transcript_exon_variant 0.76
rrl 1476298 n.2641C>G non_coding_transcript_exon_variant 0.71
rrl 1476300 n.2643G>A non_coding_transcript_exon_variant 0.57
rrl 1476300 n.2643G>T non_coding_transcript_exon_variant 0.53
rrl 1476301 n.2644A>T non_coding_transcript_exon_variant 0.33
rrl 1476309 n.2652G>C non_coding_transcript_exon_variant 0.73
rrl 1476311 n.2654G>C non_coding_transcript_exon_variant 0.34
rrl 1476337 n.2680C>T non_coding_transcript_exon_variant 0.37
rrl 1476359 n.2702C>G non_coding_transcript_exon_variant 0.36
rrl 1476381 n.2724G>C non_coding_transcript_exon_variant 0.33
rrl 1476428 n.2771C>T non_coding_transcript_exon_variant 0.73
rrl 1476466 n.2809C>T non_coding_transcript_exon_variant 0.33
rrl 1476506 n.2849T>C non_coding_transcript_exon_variant 0.31
rrl 1476515 n.2858C>T non_coding_transcript_exon_variant 0.29
rrl 1476524 n.2867C>A non_coding_transcript_exon_variant 0.5
rrl 1476524 n.2867C>T non_coding_transcript_exon_variant 0.62
rrl 1476525 n.2868A>G non_coding_transcript_exon_variant 0.27
rrl 1476530 n.2873C>T non_coding_transcript_exon_variant 0.27
rrl 1476536 n.2879G>A non_coding_transcript_exon_variant 0.27
rrl 1476537 n.2880A>G non_coding_transcript_exon_variant 0.26
rrl 1476538 n.2881A>G non_coding_transcript_exon_variant 0.27
rrl 1476539 n.2882A>G non_coding_transcript_exon_variant 0.46
rrl 1476540 n.2883C>G non_coding_transcript_exon_variant 0.63
rrl 1476544 n.2887T>A non_coding_transcript_exon_variant 0.26
rrl 1476566 n.2909A>T non_coding_transcript_exon_variant 0.26
rrl 1476567 n.2910C>T non_coding_transcript_exon_variant 0.26
rrl 1476584 n.2927C>T non_coding_transcript_exon_variant 0.75
rrl 1476585 n.2928A>G non_coding_transcript_exon_variant 0.69
rrl 1476594 n.2937C>T non_coding_transcript_exon_variant 0.69
rrl 1476603 n.2946G>A non_coding_transcript_exon_variant 0.67
rrl 1476608 n.2951C>T non_coding_transcript_exon_variant 0.51
rrl 1476614 n.2957A>T non_coding_transcript_exon_variant 0.65
rrl 1476619 n.2962C>T non_coding_transcript_exon_variant 0.62
rrl 1476628 n.2971T>A non_coding_transcript_exon_variant 0.57
rrl 1476629 n.2972C>A non_coding_transcript_exon_variant 0.53
rrl 1476630 n.2973A>G non_coding_transcript_exon_variant 0.5
rrl 1476661 n.3004A>G non_coding_transcript_exon_variant 0.35
rrl 1476665 n.3008T>G non_coding_transcript_exon_variant 0.35
rrl 1476666 n.3009C>T non_coding_transcript_exon_variant 0.38
rrl 1476675 n.3018C>G non_coding_transcript_exon_variant 0.27
rpsA 1833646 c.105T>C synonymous_variant 0.83
rpsA 1833676 c.135A>G synonymous_variant 0.22
rpsA 1833679 c.138G>C synonymous_variant 0.16
rpsA 1833682 c.141C>T synonymous_variant 0.14
rpsA 1833685 c.144G>T synonymous_variant 0.16
rpsA 1833694 c.153G>C synonymous_variant 0.24
rpsA 1833697 c.156C>T synonymous_variant 0.17
rpsA 1833709 c.168C>T synonymous_variant 0.15
rpsA 1833727 c.186G>C synonymous_variant 0.26
rpsA 1833733 c.192C>T synonymous_variant 0.23
rpsA 1833734 p.Ala65Ser missense_variant 0.27
rpsA 1833739 c.198C>T synonymous_variant 0.14
rpsA 1833742 c.201A>G synonymous_variant 0.18
rpsA 1833745 c.204G>T synonymous_variant 0.16
rpsA 1833781 c.240T>C synonymous_variant 0.19
rpsA 1833787 c.246C>G synonymous_variant 0.26
rpsA 1833790 c.249T>C synonymous_variant 0.26
rpsA 1833793 c.252C>T synonymous_variant 0.26
rpsA 1833811 c.270G>C synonymous_variant 0.27
rpsA 1833829 c.288A>G synonymous_variant 0.25
rpsA 1833832 c.291G>A synonymous_variant 0.22
rpsA 1833841 c.300C>G synonymous_variant 0.23
rpsA 1833856 c.315A>G synonymous_variant 0.23
rpsA 1833862 c.321G>T synonymous_variant 0.16
rpsA 1833894 p.Ala118Glu missense_variant 0.24
rpsA 1833928 c.387G>C synonymous_variant 0.2
rpsA 1833949 c.408T>C synonymous_variant 0.3
rpsA 1833955 c.414G>C synonymous_variant 0.32
rpsA 1833959 p.Leu140Val missense_variant 0.21
rpsA 1833970 c.429G>C synonymous_variant 0.32
rpsA 1833979 c.438T>C synonymous_variant 0.39
rpsA 1833985 c.444G>C synonymous_variant 0.21
rpsA 1833988 c.447C>G synonymous_variant 0.21
rpsA 1833997 c.456G>C synonymous_variant 0.31
rpsA 1833998 p.Val153Ile missense_variant 0.21
rpsA 1834004 p.Met155Leu missense_variant 0.2
rpsA 1834009 c.468C>T synonymous_variant 0.17
rpsA 1834012 c.471G>C synonymous_variant 0.33
rpsA 1834015 c.474G>C synonymous_variant 0.36
rpsA 1834025 p.Gln162Thr missense_variant 0.21
rpsA 1834030 c.489C>G synonymous_variant 0.36
rpsA 1834034 p.Ile165Leu missense_variant 0.24
rpsA 1834040 p.Lys167Gln missense_variant 0.21
rpsA 1834061 p.Ile174Leu missense_variant 0.24
rpsA 1834099 c.558C>G synonymous_variant 0.16
rpsA 1834114 c.573G>C synonymous_variant 0.14
rpsA 1834177 c.636A>C synonymous_variant 1.0
rpsA 1834183 c.642T>C synonymous_variant 0.2
rpsA 1834210 c.669C>T synonymous_variant 0.33
rpsA 1834219 c.678C>G synonymous_variant 0.2
rpsA 1834222 c.681T>C synonymous_variant 0.2
rpsA 1834231 c.690T>C synonymous_variant 0.36
rpsA 1834234 c.693G>C synonymous_variant 0.15
rpsA 1834240 c.699T>C synonymous_variant 0.3
rpsA 1834243 c.702G>C synonymous_variant 0.21
rpsA 1834249 c.708T>C synonymous_variant 0.35
rpsA 1834252 c.711C>G synonymous_variant 0.22
rpsA 1834261 c.720A>C synonymous_variant 0.23
rpsA 1834264 c.723G>C synonymous_variant 0.16
rpsA 1834279 p.Asp246Glu missense_variant 0.21
rpsA 1834283 p.Pro248Ala missense_variant 0.19
rpsA 1834294 c.753G>C synonymous_variant 0.2
rpsA 1834298 p.Gln253Glu missense_variant 0.3
rpsA 1834303 c.762T>C synonymous_variant 0.32
rpsA 1834306 c.765T>C synonymous_variant 0.36
rpsA 1834307 p.Asp256Gln missense_variant 0.19
rpsA 1834325 p.Val262Ile missense_variant 0.17
rpsA 1834340 p.Met267Leu missense_variant 0.24
rpsA 1834348 c.807T>C synonymous_variant 0.22
rpsA 1834361 c.820T>C synonymous_variant 0.2
rpsA 1834366 c.825A>G synonymous_variant 0.19
rpsA 1834369 c.828C>G synonymous_variant 0.17
rpsA 1834384 c.843A>G synonymous_variant 0.22
rpsA 1834411 c.870T>C synonymous_variant 0.26
rpsA 1834423 c.882G>T synonymous_variant 0.16
rpsA 1834447 c.906C>G synonymous_variant 0.17
rpsA 1834451 c.910T>C synonymous_variant 0.32
rpsA 1834465 c.924T>C synonymous_variant 0.14
rpsA 1834468 c.927A>G synonymous_variant 0.31
rpsA 1834474 c.933C>T synonymous_variant 0.14
rpsA 1834482 p.Glu314Ala missense_variant 0.15
rpsA 1834486 p.Glu315Asp missense_variant 0.15
rpsA 1834489 c.948T>C synonymous_variant 0.34
rpsA 1834528 c.987T>C synonymous_variant 0.24
rpsA 1834534 c.993C>G synonymous_variant 0.2
rpsA 1834540 c.999G>C synonymous_variant 0.23
rpsA 1834543 c.1002C>G synonymous_variant 0.23
rpsA 1834546 c.1005T>C synonymous_variant 0.22
rpsA 1834552 c.1011G>T synonymous_variant 0.18
rpsA 1834555 c.1014T>G synonymous_variant 0.19
rpsA 1834557 p.Ala339Gly missense_variant 0.18
rpsA 1834570 c.1029C>T synonymous_variant 0.17
rpsA 1834574 p.Met345Leu missense_variant 0.17
rpsA 1834606 c.1065C>T synonymous_variant 0.21
rpsA 1834609 c.1068T>C synonymous_variant 0.2
rpsA 1834619 c.1078T>C synonymous_variant 0.2
rpsA 1834627 c.1086C>G synonymous_variant 0.14
rpsA 1834633 c.1092A>G synonymous_variant 0.22
rpsA 1834639 c.1098T>C synonymous_variant 0.22
rpsA 1834667 p.Ala376Ser missense_variant 0.22
rpsA 1834753 c.1212T>C synonymous_variant 0.16
rpsA 1834759 c.1218A>C synonymous_variant 0.15
rpsA 1834765 p.Glu408Asp missense_variant 0.15
tlyA 1917972 c.33A>G synonymous_variant 1.0
katG 2154724 p.Arg463Leu missense_variant 1.0
PPE35 2167926 p.Leu896Ser missense_variant 1.0
PPE35 2170065 p.Ala183Gly missense_variant 0.21
Rv1979c 2223293 c.-129A>G upstream_gene_variant 1.0
ald 3086788 c.-32T>C upstream_gene_variant 1.0
fbiD 3339734 p.Ala206Gly missense_variant 0.32
fprA 3473996 c.-11_-10insA upstream_gene_variant 1.0
Rv3236c 3612813 p.Thr102Ala missense_variant 1.0
rpoA 3877704 c.804G>T synonymous_variant 0.16
rpoA 3877734 c.774G>C synonymous_variant 0.14
rpoA 3877743 c.765T>C synonymous_variant 0.13
rpoA 3877962 c.546G>C synonymous_variant 0.16
rpoA 3877971 p.Asp179Glu missense_variant 0.15
rpoA 3877989 c.519A>G synonymous_variant 0.17
rpoA 3878264 p.Ser82Gly missense_variant 0.14
rpoA 3878271 c.237T>C synonymous_variant 0.16
rpoA 3878283 p.Glu75Asp missense_variant 0.14
rpoA 3878292 c.216T>C synonymous_variant 0.17
rpoA 3878298 c.210A>G synonymous_variant 0.27
rpoA 3878301 c.207C>G synonymous_variant 0.26
rpoA 3878304 c.204G>C synonymous_variant 0.18
rpoA 3878307 c.201C>G synonymous_variant 0.16
rpoA 3878313 c.195G>C synonymous_variant 0.25
rpoA 3878322 c.186A>G synonymous_variant 0.25
rpoA 3878331 c.177A>G synonymous_variant 0.17
rpoA 3878337 c.171T>C synonymous_variant 0.25
rpoA 3878346 c.162T>C synonymous_variant 0.25
rpoA 3878358 c.150C>G synonymous_variant 0.16
rpoA 3878361 c.147G>C synonymous_variant 0.14
rpoA 3878364 c.144A>C synonymous_variant 0.23
rpoA 3878370 c.138T>C synonymous_variant 0.2
rpoA 3878400 c.108T>C synonymous_variant 0.14
rpoA 3878406 c.102G>C synonymous_variant 0.21
clpC1 4038713 c.1992T>C synonymous_variant 0.15
clpC1 4038740 c.1965G>C synonymous_variant 0.21
clpC1 4038755 c.1950G>T synonymous_variant 0.15
clpC1 4038767 c.1938G>T synonymous_variant 0.16
clpC1 4038773 c.1932T>C synonymous_variant 0.26
clpC1 4038791 c.1914G>C synonymous_variant 0.18
clpC1 4038794 p.Ser637Thr missense_variant 0.17
clpC1 4038812 c.1893T>C synonymous_variant 0.28
clpC1 4038815 c.1890G>A synonymous_variant 0.19
clpC1 4038839 c.1866G>C synonymous_variant 0.2
clpC1 4038860 c.1845G>C synonymous_variant 0.24
clpC1 4038878 c.1827A>G synonymous_variant 0.31
clpC1 4038881 c.1824C>T synonymous_variant 0.27
clpC1 4038890 c.1815G>A synonymous_variant 0.36
clpC1 4038905 c.1800A>C synonymous_variant 0.33
clpC1 4038911 c.1794G>T synonymous_variant 0.31
clpC1 4038914 c.1791G>C synonymous_variant 0.3
clpC1 4038917 c.1788C>T synonymous_variant 0.3
clpC1 4038923 c.1782A>G synonymous_variant 0.31
clpC1 4038926 c.1779G>T synonymous_variant 0.22
clpC1 4038953 c.1752A>G synonymous_variant 0.34
clpC1 4038956 c.1749T>C synonymous_variant 0.36
clpC1 4038965 c.1740T>C synonymous_variant 0.35
clpC1 4038971 c.1734T>C synonymous_variant 0.31
clpC1 4038974 c.1731T>C synonymous_variant 0.31
clpC1 4038997 c.1708T>C synonymous_variant 0.33
clpC1 4039004 c.1701C>G synonymous_variant 0.32
clpC1 4039007 c.1698G>C synonymous_variant 0.29
clpC1 4039022 c.1683A>G synonymous_variant 0.37
clpC1 4039067 c.1638G>C synonymous_variant 0.2
clpC1 4039073 c.1632C>T synonymous_variant 0.21
clpC1 4039079 c.1626C>G synonymous_variant 0.27
clpC1 4039082 c.1623C>T synonymous_variant 0.2
clpC1 4039085 c.1620A>G synonymous_variant 0.26
clpC1 4039091 c.1614G>C synonymous_variant 0.27
clpC1 4039097 c.1608G>T synonymous_variant 0.25
clpC1 4039100 c.1605C>G synonymous_variant 0.24
clpC1 4039106 c.1599G>T synonymous_variant 0.27
clpC1 4039112 c.1593C>G synonymous_variant 0.3
clpC1 4039121 c.1584T>C synonymous_variant 0.31
clpC1 4039136 c.1569C>T synonymous_variant 0.27
clpC1 4039142 c.1563A>G synonymous_variant 0.3
clpC1 4039145 c.1560G>C synonymous_variant 0.3
clpC1 4039169 c.1536A>G synonymous_variant 0.2
clpC1 4039172 c.1533A>G synonymous_variant 0.19
clpC1 4039178 c.1527G>C synonymous_variant 0.23
clpC1 4039181 c.1522_1524delTTGinsCTC synonymous_variant 0.17
clpC1 4039187 c.1518G>T synonymous_variant 0.2
clpC1 4039190 c.1515C>G synonymous_variant 0.25
clpC1 4039199 p.Ala502Glu missense_variant 0.21
clpC1 4039217 c.1488G>C synonymous_variant 0.24
clpC1 4039274 c.1431G>C synonymous_variant 0.21
clpC1 4039279 p.Val476Ile missense_variant 0.16
clpC1 4039280 c.1425G>C synonymous_variant 0.15
clpC1 4039286 c.1419T>G synonymous_variant 0.15
clpC1 4039289 c.1416T>C synonymous_variant 0.15
clpC1 4039295 c.1410A>G synonymous_variant 0.18
clpC1 4039310 c.1395A>G synonymous_variant 0.17
clpC1 4039313 c.1392C>G synonymous_variant 0.16
clpC1 4039319 c.1386T>C synonymous_variant 0.18
clpC1 4039322 c.1383T>C synonymous_variant 0.16
clpC1 4039328 c.1377A>G synonymous_variant 0.18
clpC1 4039334 c.1371G>C synonymous_variant 0.15
clpC1 4039382 c.1323C>G synonymous_variant 0.17
clpC1 4039391 c.1314T>G synonymous_variant 0.14
clpC1 4039526 c.1179G>C synonymous_variant 0.17
clpC1 4039544 c.1161C>T synonymous_variant 0.2
clpC1 4039559 c.1146C>G synonymous_variant 0.22
clpC1 4039562 c.1143C>G synonymous_variant 0.19
clpC1 4039565 c.1140G>C synonymous_variant 0.18
clpC1 4039575 c.1128_1129delTG frameshift_variant 0.24
clpC1 4039589 c.1116G>C synonymous_variant 0.24
clpC1 4039592 c.1113G>C synonymous_variant 0.26
clpC1 4039610 c.1095G>C synonymous_variant 0.3
clpC1 4039616 c.1089G>C synonymous_variant 0.33
clpC1 4039622 c.1083C>T synonymous_variant 0.28
clpC1 4039649 c.1056G>C synonymous_variant 0.32
clpC1 4039655 c.1050G>C synonymous_variant 0.28
clpC1 4039661 c.1044T>C synonymous_variant 0.26
clpC1 4039664 c.1041G>C synonymous_variant 0.26
clpC1 4039682 c.1023C>G synonymous_variant 0.24
clpC1 4039691 c.1014G>C synonymous_variant 0.24
clpC1 4039694 c.1011G>C synonymous_variant 0.26
clpC1 4039724 c.981A>G synonymous_variant 0.35
clpC1 4039733 c.972G>C synonymous_variant 0.27
clpC1 4039739 c.966C>G synonymous_variant 0.3
clpC1 4039748 c.957G>C synonymous_variant 0.3
clpC1 4039751 c.954A>G synonymous_variant 0.29
clpC1 4039757 c.948A>G synonymous_variant 0.29
clpC1 4039763 c.942C>A synonymous_variant 0.2
clpC1 4039766 c.939T>C synonymous_variant 0.3
clpC1 4039769 c.936C>G synonymous_variant 0.23
clpC1 4039778 c.927A>G synonymous_variant 0.31
clpC1 4039781 c.924G>C synonymous_variant 0.19
clpC1 4039793 c.912C>G synonymous_variant 0.25
clpC1 4039814 c.891C>G synonymous_variant 0.19
clpC1 4039817 c.888A>C synonymous_variant 0.21
clpC1 4039820 c.885T>G synonymous_variant 0.25
clpC1 4039829 c.874_876delTTGinsCTC synonymous_variant 0.28
clpC1 4039832 c.873C>G synonymous_variant 0.26
clpC1 4039850 c.855T>C synonymous_variant 0.28
clpC1 4039865 c.840T>C synonymous_variant 0.36
clpC1 4039875 p.Asn277Arg missense_variant 0.15
clpC1 4039887 p.Leu273Thr missense_variant 0.18
clpC1 4039889 c.816G>C synonymous_variant 0.37
clpC1 4039898 c.807C>G synonymous_variant 0.22
clpC1 4039904 c.801A>G synonymous_variant 0.27
clpC1 4039925 c.780C>G synonymous_variant 0.16
clpC1 4039929 c.775_776delAGinsTC synonymous_variant 0.23
clpC1 4039931 c.774T>C synonymous_variant 0.45
clpC1 4039934 c.771G>C synonymous_variant 0.45
clpC1 4039937 p.Val256Ile missense_variant 0.46
clpC1 4039940 c.765G>C synonymous_variant 0.23
clpC1 4039946 c.759A>C synonymous_variant 0.41
clpC1 4039949 c.756G>C synonymous_variant 0.28
clpC1 4039952 c.753T>C synonymous_variant 0.44
clpC1 4039955 c.750G>C synonymous_variant 0.23
clpC1 4039979 c.726C>G synonymous_variant 0.31
clpC1 4039982 c.723G>C synonymous_variant 0.16
clpC1 4039988 c.717C>G synonymous_variant 0.14
clpC1 4039991 c.714G>T synonymous_variant 0.14
clpC1 4039994 p.Glu237Asp missense_variant 0.38
clpC1 4040001 p.His235Arg missense_variant 0.41
clpC1 4040009 c.696C>G synonymous_variant 0.4
clpC1 4040015 c.690G>C synonymous_variant 0.4
clpC1 4040021 c.684A>C synonymous_variant 0.51
clpC1 4040024 c.681A>G synonymous_variant 0.51
clpC1 4040033 c.672G>C synonymous_variant 0.5
clpC1 4040063 c.642G>C synonymous_variant 0.39
clpC1 4040066 c.639G>C synonymous_variant 0.4
clpC1 4040069 c.636G>C synonymous_variant 0.36
clpC1 4040083 p.Thr208Ser missense_variant 0.32
clpC1 4040087 c.618G>C synonymous_variant 0.39
clpC1 4040090 c.615T>G synonymous_variant 0.34
clpC1 4040093 c.612C>G synonymous_variant 0.4
clpC1 4040096 p.Val203Ile missense_variant 0.33
clpC1 4040108 c.597G>C synonymous_variant 0.36
clpC1 4040117 c.588A>G synonymous_variant 0.31
clpC1 4040129 c.576C>G synonymous_variant 0.23
clpC1 4040135 c.570C>G synonymous_variant 0.19
clpC1 4040393 c.312G>C synonymous_variant 0.16
clpC1 4040411 c.294T>C synonymous_variant 0.2
clpC1 4040423 c.282A>G synonymous_variant 0.17
clpC1 4040431 c.274T>C synonymous_variant 0.18
clpC1 4040435 c.270G>C synonymous_variant 0.15
clpC1 4040450 c.255A>G synonymous_variant 0.23
clpC1 4040456 c.249C>T synonymous_variant 0.14
clpC1 4040459 c.246C>G synonymous_variant 0.23
clpC1 4040462 c.243C>T synonymous_variant 0.14
clpC1 4040465 c.240T>C synonymous_variant 0.22
clpC1 4040471 c.234T>C synonymous_variant 0.22
clpC1 4040480 c.225T>C synonymous_variant 0.25
clpC1 4040486 c.219G>C synonymous_variant 0.14
clpC1 4040495 c.210C>T synonymous_variant 0.16
clpC1 4040522 c.183T>C synonymous_variant 0.32
clpC1 4040528 c.177G>C synonymous_variant 0.19
clpC1 4040534 c.171A>G synonymous_variant 0.18
clpC1 4040537 c.168G>C synonymous_variant 0.15
clpC1 4040540 c.165G>C synonymous_variant 0.31
clpC1 4040546 c.159G>T synonymous_variant 0.18
clpC1 4040551 c.154T>C synonymous_variant 0.15
clpC1 4040560 c.145C>T synonymous_variant 0.14
clpC1 4040561 c.144A>G synonymous_variant 0.26
clpC1 4040570 c.135C>G synonymous_variant 0.25
clpC1 4040573 c.132T>C synonymous_variant 0.15
clpC1 4040585 c.120A>G synonymous_variant 0.22
clpC1 4040588 c.117T>C synonymous_variant 0.22
clpC1 4040594 c.111G>C synonymous_variant 0.21
clpC1 4040600 c.103_105delTTAinsCTG synonymous_variant 0.2
clpC1 4040606 c.99T>C synonymous_variant 0.2
embA 4242643 c.-590C>T upstream_gene_variant 1.0
embA 4243460 c.228C>T synonymous_variant 1.0
embB 4246584 p.Arg24Pro missense_variant 0.23
aftB 4267647 p.Asp397Gly missense_variant 1.0
whiB6 4338595 c.-75delG upstream_gene_variant 1.0
gid 4407588 c.615A>G synonymous_variant 1.0
gid 4407620 p.Tyr195His missense_variant 1.0
gid 4407927 p.Glu92Asp missense_variant 1.0