Rv3596c - c.1608G>T


Drug resistance types
124 Sensitive 6 RR-TB 48 HR-TB 14 MDR-TB 7 Pre-XDR-TB 0 XDR-TB 51 Other
lineage Counts
lineage Count
39
lineage4.2.1.1 1
lineage4.9 44
lineage4 92
lineage1.2.1.1 1
lineage4.3.4.2.1 3
lineage4;lineage2 1
lineage4.1.2.1 6
lineage3.1.3 2
lineage4.8 3
lineage3 5
lineage4.2.1 2
lineage5.1.4 1
lineage4.3.2.1 2
lineage4.3.3 2
lineage1.1.1 1
lineage4.6.2.2 3
lineage1.1.2 3
lineage2.2.1 19
lineage2.2.1.1 1
lineage4.1 2
lineage4.1.2 1
lineage2.2 3
La1.7.X-unk4 1
La1.8.1 4
lineage4.5 1
lineage1.1.3.1 1
lineage4.3.4.2 1
lineage6 1
lineage6.1.3 1
lineage1.1.1.1 1
lineage4.2;La1.7 1
lineage4.9;lineage4.8.1;lineage4.1.1 1
spoligotype Counts
spoligotype Count
None 250
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675488 HR-TB None
ERR11050975 Sensitive lineage4.2.1.1 None
SRR3675209 Sensitive lineage4.9 None
ERR4814639 HR-TB lineage4 None
SRR3675210 Sensitive lineage4.9 None
SRR3675222 Other None
SRR3675229 Other lineage4 None
ERR1750907 RR-TB None
ERR4814734 Other lineage1.2.1.1 None
SRR3675318 Other lineage4.9 None
SRR3675246 Sensitive lineage4 None
SRR3675249 Sensitive lineage4.9 None
SRR3675247 Other lineage4.9 None
SRR3675266 Sensitive lineage4.9 None
SRR3675265 Other lineage4 None
SRR3675279 Other None
SRR3675292 Sensitive lineage4 None
SRR3675537 Sensitive lineage4.9 None
SRR3675501 HR-TB None
SRR3675387 Sensitive None
SRR3675514 Sensitive lineage4.9 None
SRR3675522 Other None
SRR3675527 RR-TB lineage4.9 None
SRR3675542 Other lineage4.9 None
SRR3675541 Sensitive lineage4.9 None
SRR3675553 Sensitive lineage4.9 None
SRR3675548 Sensitive lineage4.9 None
SRR3675547 Other lineage4.9 None
ERR212138 HR-TB lineage4 None
SRR3675577 Sensitive lineage4.9 None
ERR212034 HR-TB None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR4816762 Other lineage4;lineage2 None
ERR4818646 Sensitive lineage4.1.2.1 None
ERR2513121 Sensitive lineage3.1.3 None
ERR4817667 HR-TB lineage4.8 None
SRR5341366 Sensitive lineage4 None
ERR2513259 Other lineage3 None
ERR2512770 Other lineage4.2.1 None
ERR4818561 HR-TB lineage4 None
ERR2513283 Other lineage5.1.4 None
SRR5341396 Other lineage4 None
ERR2513724 Sensitive lineage4.3.2.1 None
SRR5153091 HR-TB lineage4.3.3 None
SRR5341461 Sensitive lineage4 None
SRR5341387 Other lineage4 None
SRR5341425 Other lineage4 None
ERR4819314 Other lineage1.1.1 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR5341298 Sensitive lineage4 None
ERR4819546 HR-TB lineage3 None
ERR2514552 Sensitive lineage3 None
SRR5341296 Sensitive lineage4.9 None
SRR5341455 Sensitive lineage4 None
SRR5341437 Sensitive lineage4.9 None
SRR5341308 Sensitive lineage4 None
SRR5341303 RR-TB lineage4 None
SRR5341300 Other lineage4 None
ERR4819809 HR-TB lineage4.6.2.2 None
SRR5341299 Sensitive lineage4 None
ERR2514929 HR-TB lineage1.1.2 None
SRR5341310 Other lineage1.1.2 None
SRR5341323 Sensitive lineage4 None
ERR4820043 Sensitive lineage4.1.2.1 None
ERR4821655 Sensitive lineage4 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
SRR5341469 Other lineage4 None
SRR5341330 HR-TB None
SRR5341345 Sensitive lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR5341467 Other lineage4 None
SRR6045706 Sensitive lineage4 None
ERR4821686 Sensitive lineage4.1.2.1 None
SRR6044819 Sensitive lineage4.9 None
SRR6045892 Sensitive None
SRR6045233 HR-TB None
SRR6045217 Other lineage4 None
SRR6045320 Other lineage4.9 None
SRR6045371 Sensitive lineage4.2.1 None
SRR6046245 Other lineage4.9 None
SRR6046385 Other lineage4.9 None
ERR2851356 Sensitive lineage4.9 None
ERR4830353 Other None
SRR6046802 Other lineage4 None
SRR6046611 HR-TB lineage4.9 None
SRR6511621 HR-TB None
SRR6046897 Sensitive lineage4 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR323037 HR-TB lineage4 None
ERR11466072 Sensitive lineage4.3.4.2.1 None
ERR502470 RR-TB lineage4.9 None
ERR485006 HR-TB lineage4.9 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4831740 HR-TB lineage2.2.1 None
ERR4831638 Sensitive None
ERR4831657 MDR-TB lineage2.2.1 None
ERR4831739 MDR-TB lineage2.2.1 None
ERR502943 HR-TB None
SRR6789624 MDR-TB lineage4.1 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR9970979 Sensitive lineage4.8 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR9971080 RR-TB lineage2.2.1 None
ERR323085 Sensitive lineage4 None
SRR9970980 Other lineage4.1.2 None
SRR9971114 Other lineage2.2.1 None
SRR9971112 Other lineage2.2.1 None
SRR9971113 Other lineage2.2.1 None
ERR323066 Sensitive lineage4 None
ERR1035122 Sensitive None
ERR067712 HR-TB lineage4 None
ERR1023525 HR-TB lineage4 None
ERR1034634 HR-TB None
ERR1063839 HR-TB lineage2.2 None
ERR1063857 HR-TB None
ERR1063883 Sensitive lineage4 None
ERR3283030 HR-TB lineage4.9 None
ERR1063896 Sensitive None
ERR137286 Sensitive lineage4 None
ERR3283021 HR-TB None
ERR11465628 Sensitive lineage4.3.4.2.1 None
ERR323115 Sensitive lineage4 None
ERR3283040 HR-TB None
ERR349300 Sensitive lineage4.9 None
ERR3445487 Other La1.7.X-unk4 None
ERR349264 Sensitive lineage4 None
ERR349265 Sensitive lineage4 None
ERR349266 Sensitive lineage4.9 None
ERR349298 Sensitive lineage4 None
ERR349296 Sensitive lineage4 None
ERR349299 Sensitive lineage4 None
ERR363426 Sensitive lineage4 None
ERR349330 Sensitive lineage4 None
ERR363421 Sensitive lineage4 None
ERR363456 Sensitive lineage4 None
ERR363445 Sensitive lineage4 None
ERR363447 Sensitive lineage4 None
ERR363449 Sensitive lineage4 None
ERR363453 Sensitive lineage4 None
ERR363437 Sensitive lineage4 None
ERR363446 Sensitive lineage4 None
ERR363499 Sensitive lineage4 None
ERR363474 Sensitive lineage4 None
ERR363479 Sensitive lineage4 None
ERR363498 Sensitive lineage4 None
ERR363490 Sensitive lineage4 None
ERR363500 Sensitive lineage4 None
ERR363502 Sensitive lineage4 None
ERR363506 Sensitive lineage4 None
ERR369157 Sensitive lineage4.9 None
ERR363509 Sensitive lineage4 None
ERR369151 Sensitive lineage4.9 None
ERR369156 Sensitive lineage4.9 None
ERR369158 Sensitive lineage4 None
ERR3797060 Other La1.8.1 None
ERR369159 Sensitive lineage4 None
ERR369160 Sensitive lineage4.9 None
ERR369162 Sensitive lineage4 None
ERR369163 Sensitive lineage4 None
ERR373945 HR-TB lineage4 None
ERR373946 Sensitive lineage4 None
ERR373947 Sensitive lineage4 None
ERR3797015 HR-TB None
ERR3797047 HR-TB lineage4 None
ERR3797080 HR-TB lineage4.9 None
ERR3797073 HR-TB La1.8.1 None
ERR400326 Sensitive lineage4 None
ERR3797081 Sensitive lineage4 None
ERR400320 Sensitive lineage4 None
ERR400336 Sensitive lineage4 None
ERR400345 Other lineage4 None
ERR4178309 Other lineage4.1.2.1 None
ERR4178226 Sensitive lineage4 None
ERR4024991 Other None
ERR4188247 HR-TB None
ERR4596902 HR-TB lineage3 None
ERR4797313 HR-TB None
ERR473332 Other lineage4 None
ERR4796254 Sensitive lineage4 None
ERR4796929 Sensitive lineage4 None
ERR4797184 Sensitive lineage4 None
ERR4769521 HR-TB None
ERR4796472 Pre-XDR-TB lineage2.2.1 None
ERR4796577 MDR-TB None
ERR4797193 HR-TB lineage1.1.2 None
ERR4797264 Sensitive None
ERR4797350 Sensitive lineage4.9 None
ERR4798099 Other None
ERR4798823 HR-TB lineage4 None
ERR4798431 HR-TB None
ERR4799378 Sensitive lineage4 None
ERR4799025 Pre-XDR-TB None
ERR4799547 Sensitive lineage2.2.1 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4799513 HR-TB lineage2.2 None
ERR4810624 HR-TB lineage2.2 None
ERR4812155 Sensitive None
ERR4811030 Sensitive None
ERR4811031 Sensitive lineage4.5 None
ERR6865513 Other lineage4.1.2.1 None
ERR6865502 Sensitive lineage4 None
ERR6358979 Other None
ERR736831 HR-TB lineage4.9 None
ERR6866639 Other None
ERR6866022 Other None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR6866410 Sensitive None
ERR6866807 HR-TB lineage4 None
ERR9786597 Sensitive lineage4.6.2.2 None
ERR736834 Sensitive lineage4 None
ERR751326 Sensitive lineage4 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR9786592 Sensitive lineage4.3.4.2 None
ERR736848 HR-TB None
ERR736872 Sensitive lineage4 None
ERR9786528 Sensitive lineage4.6.2.2 None
SRR10315567 Other lineage2.2.1 None
ERR9787030 Sensitive lineage6 None
ERR9787256 Other lineage6.1.3 None
SRR1173777 Other lineage4 None
SRR10315751 MDR-TB lineage4.8 None
SRR11462861 Other La1.8.1 None
SRR10809074 Sensitive lineage4 None
SRR1158918 Sensitive lineage4 None
SRR1175508 Other lineage4.9 None
SRR1175500 MDR-TB lineage4 None
SRR1175496 HR-TB lineage4.9 None
SRR1175507 MDR-TB lineage4 None
SRR1180996 HR-TB lineage4 None
SRR1183965 Sensitive lineage4.9 None
SRR14782405 HR-TB None
SRR13837619 Sensitive lineage4.9 None
SRR18913742 Sensitive lineage3.1.3 None
SRR1791747 Other La1.8.1 None
SRR20632814 Sensitive lineage4 None
SRR19295647 Sensitive lineage4.9 None
SRR2010299 Pre-XDR-TB lineage2.2.1 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR26399491 Sensitive lineage1.1.1.1 None
SRR3675473 Sensitive lineage4.9 None
SRR22424765 MDR-TB lineage4 None
SRR12708416 Sensitive lineage4.1 None
SRR23961559 Other lineage4.2;La1.7 None
SRR26399255 Sensitive lineage2.2.1 None
SRR3675455 Sensitive lineage4 None
SRR3675472 Sensitive lineage4.9 None
SRR3675477 Other lineage4.9 None
ERR779852 Sensitive lineage4.9;lineage4.8.1;lineage4.1.1 None