TB-Profiler result

Run: ERR2513121
Summary

Run ID: ERR2513121

Sample name:

Date: 31-03-2023 19:28:37

Number of reads: 1658248

Percentage reads mapped: 73.65

Strain: lineage3.1.3

Drug-resistance: Sensitive

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Drug resistance: This table reports drug-resistance associated mutations found in known resistance genes
Drug Resistance Supporting mutations
Lineage Table: The lineage is inferred by analysing lineage specific SNPs
Lineage Family Main Spoligotype RDs Frequency
lineage3 East-African-Indian CAS RD750 1.0
lineage3.1.3 East-African-Indian CAS RD750 1.0
Drug resistance-Associated Mutations: This table reports mutations found in candidate resistance genes which have been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs
Non-Associated Mutations: This table reports mutations found in candidate resistance genes which have not been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction
gyrB 6175 c.936G>A synonymous_variant 0.15
gyrB 6187 c.948C>T synonymous_variant 0.14
gyrB 6203 c.964_966delAGCinsTCG synonymous_variant 0.13
gyrB 6215 p.Ser326Thr missense_variant 0.12
gyrB 6242 p.Arg335Lys missense_variant 0.24
gyrB 6250 c.1011A>T synonymous_variant 0.22
gyrB 6253 c.1014G>C synonymous_variant 0.2
gyrB 6265 c.1026C>T synonymous_variant 0.22
gyrB 6268 c.1029C>G synonymous_variant 0.22
gyrB 6280 c.1041T>C synonymous_variant 0.18
gyrB 6286 c.1047T>C synonymous_variant 0.18
gyrB 6292 c.1053G>T synonymous_variant 0.16
gyrA 6727 c.-575G>T upstream_gene_variant 0.13
gyrA 6730 c.-572A>G upstream_gene_variant 0.12
gyrA 7362 p.Glu21Gln missense_variant 1.0
gyrA 7424 c.123G>A synonymous_variant 0.21
gyrA 7433 c.132G>C synonymous_variant 0.23
gyrA 7436 c.135C>T synonymous_variant 0.22
gyrA 7442 c.141G>C synonymous_variant 0.23
gyrA 7457 c.156T>C synonymous_variant 0.26
gyrA 7460 c.159C>G synonymous_variant 0.26
gyrA 7463 c.162G>C synonymous_variant 0.26
gyrA 7472 c.171T>C synonymous_variant 0.21
gyrA 7475 c.174A>G synonymous_variant 0.23
gyrA 7480 p.Phe60Tyr missense_variant 0.25
gyrA 7484 c.183T>C synonymous_variant 0.24
gyrA 7487 c.186C>G synonymous_variant 0.24
gyrA 7499 c.198G>A synonymous_variant 0.3
gyrA 7523 c.222C>A synonymous_variant 0.32
gyrA 7526 c.225G>T synonymous_variant 0.32
gyrA 7532 c.231T>C synonymous_variant 0.32
gyrA 7541 c.240C>G synonymous_variant 0.3
gyrA 7547 c.246C>T synonymous_variant 0.26
gyrA 7569 p.Ala90Ser missense_variant 0.22
gyrA 7585 p.Ser95Thr missense_variant 1.0
gyrA 7859 c.558A>C synonymous_variant 0.14
gyrA 7865 c.564T>C synonymous_variant 0.12
gyrA 7886 c.585T>C synonymous_variant 0.13
gyrA 7889 c.588G>A synonymous_variant 0.12
gyrA 7890 c.589C>T synonymous_variant 0.12
gyrA 7898 p.Asp199Glu missense_variant 0.13
gyrA 8375 c.1074G>C synonymous_variant 0.13
gyrA 8471 c.1170T>C synonymous_variant 0.15
gyrA 8477 c.1176C>T synonymous_variant 0.15
gyrA 8486 c.1185T>G synonymous_variant 0.17
gyrA 8489 c.1188A>G synonymous_variant 0.16
gyrA 8501 c.1200G>A synonymous_variant 0.16
gyrA 8504 c.1203G>C synonymous_variant 0.16
gyrA 8513 c.1212C>G synonymous_variant 0.16
gyrA 8516 c.1215T>C synonymous_variant 0.16
gyrA 8519 c.1218A>C synonymous_variant 0.16
gyrA 8520 c.1219C>T synonymous_variant 0.16
gyrA 8528 c.1227G>C synonymous_variant 0.15
gyrA 8535 p.Glu412Gln missense_variant 0.16
gyrA 8540 c.1239C>G synonymous_variant 0.16
gyrA 8546 p.Asp415Glu missense_variant 0.16
gyrA 8555 c.1254G>C synonymous_variant 0.18
gyrA 8561 c.1260A>C synonymous_variant 0.16
gyrA 8588 c.1287G>A synonymous_variant 0.15
gyrA 8603 c.1302A>C synonymous_variant 0.13
gyrA 8897 c.1596T>C synonymous_variant 0.19
gyrA 8903 c.1602T>C synonymous_variant 0.19
gyrA 8915 c.1614A>G synonymous_variant 0.21
gyrA 8939 c.1638T>C synonymous_variant 0.18
gyrA 8942 c.1641G>A synonymous_variant 0.18
gyrA 8946 c.1645T>C synonymous_variant 0.18
gyrA 8952 p.Gln551Ala missense_variant 0.18
gyrA 8967 p.Ala556Asn missense_variant 0.19
gyrA 8981 c.1680G>C synonymous_variant 0.18
gyrA 8996 c.1695T>C synonymous_variant 0.19
gyrA 8998 p.Leu566Trp missense_variant 0.19
gyrA 9017 c.1716C>G synonymous_variant 0.17
gyrA 9023 c.1722A>C synonymous_variant 0.17
gyrA 9304 p.Gly668Asp missense_variant 1.0
fgd1 491742 c.960T>C synonymous_variant 1.0
rpoB 760151 c.345G>A synonymous_variant 0.13
rpoB 760196 c.390C>G synonymous_variant 0.14
rpoB 760235 c.429T>C synonymous_variant 0.13
rpoB 760244 c.438G>C synonymous_variant 0.15
rpoB 760283 c.477G>C synonymous_variant 0.15
rpoB 760298 c.492G>C synonymous_variant 0.16
rpoB 760310 c.504G>C synonymous_variant 0.17
rpoB 760316 c.510C>G synonymous_variant 0.18
rpoB 760325 c.519G>C synonymous_variant 0.2
rpoB 760331 c.525G>C synonymous_variant 0.19
rpoB 760334 c.528G>T synonymous_variant 0.2
rpoB 760340 c.534G>T synonymous_variant 0.19
rpoB 760357 p.Thr184Ser missense_variant 0.26
rpoB 760361 c.555T>C synonymous_variant 0.27
rpoB 760370 c.564C>G synonymous_variant 0.26
rpoB 760376 p.Asp190Glu missense_variant 0.25
rpoB 760407 p.Ser201Gly missense_variant 0.22
rpoB 760415 c.609C>T synonymous_variant 0.19
rpoB 760424 c.618C>G synonymous_variant 0.2
rpoB 760430 c.624T>C synonymous_variant 0.19
rpoB 760784 c.978G>C synonymous_variant 0.12
rpoB 760793 c.987A>G synonymous_variant 0.13
rpoB 760805 c.999G>C synonymous_variant 0.13
rpoB 760817 c.1011A>G synonymous_variant 0.15
rpoB 760820 c.1014T>C synonymous_variant 0.15
rpoB 760826 c.1020C>G synonymous_variant 0.17
rpoB 760829 c.1023C>T synonymous_variant 0.17
rpoB 760830 c.1024T>C synonymous_variant 0.17
rpoB 760841 c.1035T>C synonymous_variant 0.15
rpoB 760848 p.Thr348Ser missense_variant 0.14
rpoB 760859 c.1053T>C synonymous_variant 0.14
rpoB 760862 c.1056G>C synonymous_variant 0.14
rpoB 760865 c.1059C>T synonymous_variant 0.13
rpoB 760877 c.1071G>T synonymous_variant 0.13
rpoB 760883 c.1077G>C synonymous_variant 0.12
rpoB 760916 c.1110C>T synonymous_variant 0.16
rpoB 760919 c.1113C>T synonymous_variant 0.15
rpoB 760925 c.1119T>C synonymous_variant 0.13
rpoB 760928 c.1122G>C synonymous_variant 0.13
rpoB 760934 c.1128C>T synonymous_variant 0.15
rpoB 760997 c.1191G>C synonymous_variant 0.13
rpoB 761027 c.1221A>C synonymous_variant 0.17
rpoB 761036 c.1230G>C synonymous_variant 0.16
rpoB 761037 c.1231T>C synonymous_variant 0.16
rpoB 761147 c.1341C>T synonymous_variant 0.13
rpoB 761234 c.1428G>C synonymous_variant 0.14
rpoB 761249 c.1443A>G synonymous_variant 0.15
rpoB 761300 c.1494G>C synonymous_variant 0.13
rpoB 761318 c.1512G>C synonymous_variant 0.14
rpoB 761327 c.1521A>G synonymous_variant 0.14
rpoB 761333 c.1527G>T synonymous_variant 0.14
rpoB 761948 c.2142G>C synonymous_variant 0.13
rpoB 761999 c.2193G>C synonymous_variant 0.22
rpoB 762002 c.2196C>G synonymous_variant 0.22
rpoB 762038 c.2232C>T synonymous_variant 0.22
rpoB 762047 c.2241G>A synonymous_variant 0.22
rpoB 762053 c.2247T>C synonymous_variant 0.24
rpoB 762065 c.2259T>C synonymous_variant 0.24
rpoB 762083 c.2277T>C synonymous_variant 0.23
rpoB 762086 c.2280G>C synonymous_variant 0.23
rpoB 762101 c.2295C>G synonymous_variant 0.22
rpoB 762114 p.Ile770Val missense_variant 0.23
rpoB 762122 c.2316C>T synonymous_variant 0.24
rpoB 762131 c.2325C>G synonymous_variant 0.18
rpoB 762137 c.2331C>T synonymous_variant 0.17
rpoB 762140 c.2334G>C synonymous_variant 0.19
rpoB 762143 c.2337T>C synonymous_variant 0.18
rpoB 762149 c.2343G>C synonymous_variant 0.2
rpoB 762158 c.2352G>C synonymous_variant 0.24
rpoB 762167 c.2361T>C synonymous_variant 0.22
rpoB 762176 c.2370T>C synonymous_variant 0.21
rpoB 762185 c.2379G>C synonymous_variant 0.2
rpoB 762233 c.2427G>C synonymous_variant 0.24
rpoB 762239 c.2433G>A synonymous_variant 0.22
rpoB 762245 c.2439G>C synonymous_variant 0.23
rpoB 762284 c.2478G>T synonymous_variant 0.27
rpoB 762293 c.2487T>G synonymous_variant 0.26
rpoB 762308 c.2502G>C synonymous_variant 0.2
rpoB 762314 c.2508C>T synonymous_variant 0.19
rpoB 762317 c.2511A>G synonymous_variant 0.19
rpoB 762329 c.2523G>C synonymous_variant 0.18
rpoB 762338 c.2532T>C synonymous_variant 0.18
rpoB 762341 c.2535G>C synonymous_variant 0.17
rpoB 762347 c.2541T>C synonymous_variant 0.24
rpoB 762353 c.2547C>T synonymous_variant 0.26
rpoB 762362 p.Glu852Asp missense_variant 0.27
rpoB 762369 c.2563T>C synonymous_variant 0.27
rpoC 762374 c.-996G>C upstream_gene_variant 0.29
rpoC 762380 c.-990T>C upstream_gene_variant 0.29
rpoC 762395 c.-975G>C upstream_gene_variant 0.22
rpoC 762398 c.-972T>C upstream_gene_variant 0.21
rpoC 762401 c.-969G>C upstream_gene_variant 0.19
rpoC 762404 c.-966T>C upstream_gene_variant 0.2
rpoC 762410 c.-960T>C upstream_gene_variant 0.28
rpoC 762416 c.-954A>G upstream_gene_variant 0.28
rpoC 762434 c.-936T>G upstream_gene_variant 0.72
rpoC 762443 c.-927G>C upstream_gene_variant 0.3
rpoC 762449 c.-921C>A upstream_gene_variant 0.26
rpoC 762452 c.-918G>C upstream_gene_variant 0.27
rpoC 762470 c.-900G>C upstream_gene_variant 0.24
rpoC 762488 c.-882G>C upstream_gene_variant 0.16
rpoC 762491 c.-879T>C upstream_gene_variant 0.18
rpoC 762509 c.-861T>G upstream_gene_variant 0.14
rpoB 762510 p.Ala902Pro missense_variant 0.14
rpoC 762515 c.-855C>T upstream_gene_variant 0.14
rpoB 762879 p.Met1025Leu missense_variant 0.15
rpoC 762911 c.-459C>T upstream_gene_variant 0.22
rpoC 762920 c.-450C>T upstream_gene_variant 0.21
rpoC 762929 c.-441G>C upstream_gene_variant 0.2
rpoC 762959 c.-411G>C upstream_gene_variant 0.22
rpoC 762962 c.-408C>T upstream_gene_variant 0.24
rpoC 762983 c.-387C>T upstream_gene_variant 0.26
rpoC 762989 c.-381G>A upstream_gene_variant 0.24
rpoC 762995 c.-375G>T upstream_gene_variant 0.24
rpoC 763004 c.-366G>A upstream_gene_variant 0.23
rpoC 763007 c.-363C>T upstream_gene_variant 0.23
rpoC 763022 c.-348C>G upstream_gene_variant 0.26
rpoC 763028 c.-342T>C upstream_gene_variant 0.26
rpoC 763031 c.-339T>C upstream_gene_variant 0.75
rpoC 763053 c.-317T>C upstream_gene_variant 0.3
rpoC 763070 c.-300T>C upstream_gene_variant 0.31
rpoC 763076 c.-294C>G upstream_gene_variant 0.33
rpoC 763088 c.-282C>G upstream_gene_variant 0.31
rpoC 763103 c.-267G>C upstream_gene_variant 0.3
rpoC 763115 c.-255T>C upstream_gene_variant 0.26
rpoC 763127 c.-243G>T upstream_gene_variant 0.24
rpoC 763130 c.-240G>A upstream_gene_variant 0.24
rpoC 763133 c.-237G>C upstream_gene_variant 0.25
rpoC 763136 c.-234C>T upstream_gene_variant 0.27
rpoC 763160 c.-210G>T upstream_gene_variant 0.26
rpoC 763166 c.-204A>G upstream_gene_variant 0.26
rpoC 763169 c.-201A>G upstream_gene_variant 0.24
rpoC 763193 c.-177C>T upstream_gene_variant 0.18
rpoC 763202 c.-168A>C upstream_gene_variant 0.16
rpoC 763205 c.-165G>C upstream_gene_variant 0.15
rpoC 763208 c.-162T>C upstream_gene_variant 0.14
rpoC 763214 c.-156T>C upstream_gene_variant 0.14
rpoC 763465 c.96G>A synonymous_variant 0.16
rpoC 763468 c.99G>C synonymous_variant 0.18
rpoC 763486 c.117T>G synonymous_variant 0.22
rpoC 763492 c.123G>T synonymous_variant 0.21
rpoC 763528 c.159G>A synonymous_variant 0.28
rpoC 763546 c.177A>G synonymous_variant 0.23
rpoC 763570 c.201G>C synonymous_variant 0.23
rpoC 763573 c.204G>C synonymous_variant 0.22
rpoC 763576 c.207C>G synonymous_variant 0.22
rpoC 763594 c.225C>T synonymous_variant 0.25
rpoC 763621 c.252C>G synonymous_variant 0.14
rpoC 763741 c.372C>T synonymous_variant 0.12
rpoC 763747 c.378G>A synonymous_variant 0.15
rpoC 763765 c.396T>G synonymous_variant 0.13
rpoC 763781 p.Ser138Ala missense_variant 0.14
rpoC 763792 p.Glu141Asp missense_variant 0.16
rpoC 763807 c.438T>C synonymous_variant 0.16
rpoC 763813 c.444C>G synonymous_variant 0.17
rpoC 763816 c.447C>G synonymous_variant 0.17
rpoC 763831 c.462A>G synonymous_variant 0.16
rpoC 763837 c.468G>C synonymous_variant 0.14
rpoC 763840 c.471G>C synonymous_variant 0.16
rpoC 763861 c.492C>T synonymous_variant 0.13
rpoC 763872 p.Gly168Ala missense_variant 0.16
rpoC 763876 p.Glu169Asp missense_variant 0.16
rpoC 763879 c.510A>G synonymous_variant 0.15
rpoC 763891 c.522G>C synonymous_variant 0.15
rpoC 763894 c.525A>G synonymous_variant 0.15
rpoC 763900 c.531G>C synonymous_variant 0.14
rpoC 764227 c.858G>C synonymous_variant 0.13
rpoC 764239 c.870T>G synonymous_variant 0.14
rpoC 764254 c.885G>C synonymous_variant 0.19
rpoC 764263 c.894G>C synonymous_variant 0.16
rpoC 764266 c.897T>C synonymous_variant 0.17
rpoC 764272 c.903G>C synonymous_variant 0.17
rpoC 764278 c.909A>G synonymous_variant 0.17
rpoC 764293 c.924G>C synonymous_variant 0.21
rpoC 764297 p.Met310Leu missense_variant 0.23
rpoC 764344 c.975C>T synonymous_variant 0.2
rpoC 764353 c.984G>T synonymous_variant 0.2
rpoC 764365 c.996C>T synonymous_variant 0.19
rpoC 764371 c.1002G>C synonymous_variant 0.15
rpoC 764374 c.1005C>T synonymous_variant 0.15
rpoC 764380 c.1011G>C synonymous_variant 0.17
rpoC 764387 c.1018T>C synonymous_variant 0.17
rpoC 764405 c.1036A>C synonymous_variant 0.13
rpoC 764435 c.1066A>C synonymous_variant 0.12
rpoC 764485 c.1116G>C synonymous_variant 0.18
rpoC 764491 c.1122G>T synonymous_variant 0.18
rpoC 764497 c.1128A>G synonymous_variant 0.18
rpoC 764500 c.1131C>G synonymous_variant 0.2
rpoC 764521 c.1152T>C synonymous_variant 0.23
rpoC 764527 c.1158C>T synonymous_variant 0.2
rpoC 764530 c.1161C>T synonymous_variant 0.15
rpoC 764536 c.1167G>T synonymous_variant 0.15
rpoC 764539 c.1170C>G synonymous_variant 0.19
rpoC 764560 c.1191T>C synonymous_variant 0.21
rpoC 764575 c.1206T>G synonymous_variant 0.25
rpoC 764605 c.1236G>C synonymous_variant 0.32
rpoC 764611 c.1242G>T synonymous_variant 0.35
rpoC 764623 c.1254C>G synonymous_variant 0.27
rpoC 764626 c.1257C>T synonymous_variant 0.27
rpoC 764632 c.1263T>C synonymous_variant 0.28
rpoC 764650 c.1281G>T synonymous_variant 0.26
rpoC 764692 c.1323C>T synonymous_variant 0.19
rpoC 764701 c.1332C>G synonymous_variant 0.19
rpoC 764713 c.1344G>T synonymous_variant 0.2
rpoC 764719 c.1350G>A synonymous_variant 0.21
rpoC 764746 c.1377G>T synonymous_variant 0.15
rpoC 764752 c.1383G>C synonymous_variant 0.15
rpoC 764758 c.1389C>G synonymous_variant 0.13
rpoC 764764 c.1395T>C synonymous_variant 0.13
rpoC 764809 c.1440C>T synonymous_variant 0.13
rpoC 764815 c.1446A>G synonymous_variant 0.13
rpoC 764851 c.1482C>T synonymous_variant 0.16
rpoC 764858 c.1489T>C synonymous_variant 0.16
rpoC 764869 c.1500C>T synonymous_variant 0.15
rpoC 764875 c.1506C>T synonymous_variant 0.13
rpoC 765466 c.2097C>T synonymous_variant 0.13
rpoC 765835 c.2466C>T synonymous_variant 0.15
rpoC 765886 c.2517C>G synonymous_variant 0.13
rpoC 767020 c.3651C>G synonymous_variant 0.13
rpoC 767023 c.3654C>T synonymous_variant 0.13
rpoC 767068 c.3699G>T synonymous_variant 0.21
rpoC 767098 c.3729T>C synonymous_variant 0.16
rpoC 767104 c.3735C>G synonymous_variant 0.14
rpoC 767105 p.Asn1246Gln missense_variant 0.14
rpoC 767119 c.3750A>G synonymous_variant 0.18
rpoC 767134 c.3765C>T synonymous_variant 0.16
rpoC 767138 c.3769C>T synonymous_variant 0.19
rpoC 767162 p.Asn1265Ala missense_variant 0.15
rpoC 767167 c.3798C>T synonymous_variant 0.15
rpoC 767174 p.Asn1269Asp missense_variant 0.15
rpoC 767180 p.Ala1271Gln missense_variant 0.15
rpoC 767191 c.3822C>G synonymous_variant 0.14
rpoC 767197 c.3828G>A synonymous_variant 0.13
mmpL5 775639 p.Ile948Val missense_variant 1.0
mmpL5 776100 p.Thr794Ile missense_variant 1.0
rpsL 781395 c.-165T>C upstream_gene_variant 1.0
rpsL 781814 c.255C>T synonymous_variant 0.14
rpsL 781829 c.270G>T synonymous_variant 0.16
rpsL 781832 c.273T>G synonymous_variant 0.15
rpsL 781838 c.279G>C synonymous_variant 0.16
rpsL 781841 c.282C>T synonymous_variant 0.16
rpsL 781859 c.300T>G synonymous_variant 0.16
rpsL 781868 c.309T>C synonymous_variant 0.17
rpsL 781871 c.312G>C synonymous_variant 0.17
rpsL 781877 c.318T>C synonymous_variant 0.19
rpsL 781892 c.333A>G synonymous_variant 0.17
rpsL 781898 c.339A>C synonymous_variant 0.16
rpsL 781901 c.342C>T synonymous_variant 0.15
rpsL 781907 c.348T>C synonymous_variant 0.15
rpsL 781916 c.357T>C synonymous_variant 0.16
rpsL 781929 p.Gly124Ser missense_variant 0.14
fbiC 1304571 c.1641G>C synonymous_variant 0.13
fbiC 1304580 c.1650T>C synonymous_variant 0.14
atpE 1461116 c.72C>T synonymous_variant 0.19
rrs 1471659 n.-187C>T upstream_gene_variant 1.0
rrs 1471922 n.78delT non_coding_transcript_exon_variant 0.14
rrs 1471925 n.80T>C non_coding_transcript_exon_variant 0.13
rrs 1471934 n.89A>G non_coding_transcript_exon_variant 0.13
rrs 1471986 n.141C>T non_coding_transcript_exon_variant 0.2
rrs 1472019 n.174G>A non_coding_transcript_exon_variant 0.22
rrs 1472023 n.178G>T non_coding_transcript_exon_variant 0.22
rrs 1472028 n.183A>G non_coding_transcript_exon_variant 0.21
rrs 1472031 n.186G>C non_coding_transcript_exon_variant 0.21
rrs 1472032 n.187G>A non_coding_transcript_exon_variant 0.21
rrs 1472033 n.188A>C non_coding_transcript_exon_variant 0.22
rrs 1472035 n.190G>T non_coding_transcript_exon_variant 0.25
rrs 1472037 n.192A>C non_coding_transcript_exon_variant 0.23
rrs 1472040 n.195T>G non_coding_transcript_exon_variant 0.23
rrs 1472041 n.196C>T non_coding_transcript_exon_variant 0.23
rrs 1472042 n.197T>G non_coding_transcript_exon_variant 0.23
rrs 1472053 n.211_212delGC non_coding_transcript_exon_variant 0.23
rrs 1472061 n.216A>T non_coding_transcript_exon_variant 0.24
rrs 1472075 n.230A>G non_coding_transcript_exon_variant 0.34
rrs 1472106 n.261G>A non_coding_transcript_exon_variant 0.41
rrs 1472108 n.263C>T non_coding_transcript_exon_variant 0.42
rrs 1472150 n.305T>A non_coding_transcript_exon_variant 0.4
rrs 1472251 n.406G>A non_coding_transcript_exon_variant 0.24
rrs 1472337 n.492C>G non_coding_transcript_exon_variant 0.36
rrs 1472380 n.535G>C non_coding_transcript_exon_variant 0.5
rrs 1472446 n.601T>A non_coding_transcript_exon_variant 0.56
rrs 1472452 n.607G>A non_coding_transcript_exon_variant 0.57
rrs 1472464 n.619A>G non_coding_transcript_exon_variant 0.57
rrs 1472755 n.910G>A non_coding_transcript_exon_variant 0.47
rrs 1472847 n.1002G>C non_coding_transcript_exon_variant 0.51
rrs 1472848 n.1003T>A non_coding_transcript_exon_variant 0.5
rrs 1472849 n.1004C>G non_coding_transcript_exon_variant 0.5
rrs 1472858 n.1013G>T non_coding_transcript_exon_variant 0.49
rrs 1472859 n.1014G>T non_coding_transcript_exon_variant 0.49
rrs 1472860 n.1015C>G non_coding_transcript_exon_variant 0.48
rrs 1472953 n.1108G>A non_coding_transcript_exon_variant 0.49
rrs 1472957 n.1112C>T non_coding_transcript_exon_variant 0.48
rrs 1472969 n.1124A>G non_coding_transcript_exon_variant 0.47
rrs 1472978 n.1133T>C non_coding_transcript_exon_variant 0.47
rrs 1473104 n.1259C>T non_coding_transcript_exon_variant 0.51
rrs 1473110 n.1265T>G non_coding_transcript_exon_variant 0.49
rrs 1473111 n.1266A>G non_coding_transcript_exon_variant 0.49
rrs 1473276 n.1431A>G non_coding_transcript_exon_variant 0.5
rrs 1473290 n.1445C>T non_coding_transcript_exon_variant 0.47
rrs 1473291 n.1446_1447insT non_coding_transcript_exon_variant 0.51
rrs 1473301 n.1456T>C non_coding_transcript_exon_variant 0.49
rrl 1473657 n.-1T>G upstream_gene_variant 0.2
rrl 1473668 n.11C>T non_coding_transcript_exon_variant 0.3
rrl 1473696 n.39T>C non_coding_transcript_exon_variant 0.33
rrl 1473697 n.40C>T non_coding_transcript_exon_variant 0.33
rrl 1473699 n.42A>G non_coding_transcript_exon_variant 0.33
rrl 1473717 n.60G>T non_coding_transcript_exon_variant 0.38
rrl 1473746 n.89T>C non_coding_transcript_exon_variant 0.42
rrl 1473758 n.101G>T non_coding_transcript_exon_variant 0.46
rrl 1473770 n.113T>G non_coding_transcript_exon_variant 0.46
rrl 1473806 n.149C>T non_coding_transcript_exon_variant 0.4
rrl 1473812 n.155G>A non_coding_transcript_exon_variant 0.29
rrl 1473814 n.157A>T non_coding_transcript_exon_variant 0.28
rrl 1473815 n.158T>A non_coding_transcript_exon_variant 0.26
rrl 1473823 n.166T>C non_coding_transcript_exon_variant 0.23
rrl 1473829 n.172G>T non_coding_transcript_exon_variant 0.25
rrl 1473830 n.173T>G non_coding_transcript_exon_variant 0.28
rrl 1473832 n.175C>T non_coding_transcript_exon_variant 0.33
rrl 1473836 n.179A>G non_coding_transcript_exon_variant 0.31
rrl 1473876 n.219G>A non_coding_transcript_exon_variant 0.17
rrl 1474034 n.377G>A non_coding_transcript_exon_variant 0.18
rrl 1474044 n.387C>T non_coding_transcript_exon_variant 0.13
rrl 1474045 n.388C>T non_coding_transcript_exon_variant 0.13
rrl 1474054 n.397T>C non_coding_transcript_exon_variant 0.17
rrl 1474083 n.426C>T non_coding_transcript_exon_variant 0.3
rrl 1474091 n.434C>T non_coding_transcript_exon_variant 0.3
rrl 1474093 n.436G>A non_coding_transcript_exon_variant 0.31
rrl 1474096 n.439C>T non_coding_transcript_exon_variant 0.31
rrl 1474102 n.445_446insTGAAC non_coding_transcript_exon_variant 0.3
rrl 1474135 n.478G>A non_coding_transcript_exon_variant 0.47
rrl 1474140 n.483C>T non_coding_transcript_exon_variant 0.47
rrl 1474151 n.494C>T non_coding_transcript_exon_variant 0.47
rrl 1474174 n.517A>G non_coding_transcript_exon_variant 0.5
rrl 1474181 n.524C>T non_coding_transcript_exon_variant 0.48
rrl 1474183 n.526T>C non_coding_transcript_exon_variant 0.46
rrl 1474185 n.528G>A non_coding_transcript_exon_variant 0.48
rrl 1474186 n.529A>G non_coding_transcript_exon_variant 0.48
rrl 1474249 n.592G>T non_coding_transcript_exon_variant 0.5
rrl 1474266 n.609T>C non_coding_transcript_exon_variant 0.36
rrl 1474269 n.612C>T non_coding_transcript_exon_variant 0.36
rrl 1474305 n.648G>T non_coding_transcript_exon_variant 0.31
rrl 1474306 n.649A>T non_coding_transcript_exon_variant 0.32
rrl 1474308 n.651G>T non_coding_transcript_exon_variant 0.32
rrl 1474310 n.653T>G non_coding_transcript_exon_variant 0.32
rrl 1474362 n.705A>G non_coding_transcript_exon_variant 0.39
rrl 1474432 n.775C>T non_coding_transcript_exon_variant 0.39
rrl 1474439 n.782A>G non_coding_transcript_exon_variant 0.42
rrl 1474446 n.789C>T non_coding_transcript_exon_variant 0.52
rrl 1474626 n.969T>C non_coding_transcript_exon_variant 0.3
rrl 1474627 n.970G>A non_coding_transcript_exon_variant 0.3
rrl 1474629 n.972G>A non_coding_transcript_exon_variant 0.3
rrl 1474632 n.975G>T non_coding_transcript_exon_variant 0.32
rrl 1474636 n.979A>T non_coding_transcript_exon_variant 0.32
rrl 1474637 n.980C>T non_coding_transcript_exon_variant 0.35
rrl 1474638 n.981C>G non_coding_transcript_exon_variant 0.35
rrl 1474639 n.982G>T non_coding_transcript_exon_variant 0.35
rrl 1474640 n.983C>T non_coding_transcript_exon_variant 0.35
rrl 1474673 n.1016T>C non_coding_transcript_exon_variant 0.41
rrl 1474676 n.1019T>A non_coding_transcript_exon_variant 0.42
rrl 1474677 n.1020A>G non_coding_transcript_exon_variant 0.41
rrl 1474710 n.1053T>A non_coding_transcript_exon_variant 0.23
rrl 1474711 n.1054G>C non_coding_transcript_exon_variant 0.22
rrl 1474712 n.1055G>A non_coding_transcript_exon_variant 0.22
rrl 1474713 n.1056T>A non_coding_transcript_exon_variant 0.22
rrl 1474753 n.1096A>G non_coding_transcript_exon_variant 0.45
rrl 1474760 n.1103A>G non_coding_transcript_exon_variant 0.47
rrl 1474794 n.1137C>T non_coding_transcript_exon_variant 0.52
rrl 1474803 n.1146G>A non_coding_transcript_exon_variant 0.5
rrl 1474812 n.1155G>A non_coding_transcript_exon_variant 0.49
rrl 1474830 n.1173A>G non_coding_transcript_exon_variant 0.56
rrl 1474932 n.1275C>T non_coding_transcript_exon_variant 0.27
rrl 1475061 n.1404C>A non_coding_transcript_exon_variant 0.38
rrl 1475062 n.1405A>T non_coding_transcript_exon_variant 0.38
rrl 1475120 n.1463G>T non_coding_transcript_exon_variant 0.55
rrl 1475315 n.1658A>T non_coding_transcript_exon_variant 0.18
rrl 1475353 n.1696A>T non_coding_transcript_exon_variant 0.29
rrl 1475354 n.1697A>G non_coding_transcript_exon_variant 0.29
rrl 1475355 n.1698C>T non_coding_transcript_exon_variant 0.27
rrl 1475363 n.1706C>T non_coding_transcript_exon_variant 0.25
rrl 1475379 n.1722G>A non_coding_transcript_exon_variant 0.21
rrl 1475380 n.1723C>A non_coding_transcript_exon_variant 0.21
rrl 1475381 n.1724G>C non_coding_transcript_exon_variant 0.21
rrl 1475382 n.1725A>G non_coding_transcript_exon_variant 0.21
rrl 1475394 n.1738delT non_coding_transcript_exon_variant 0.18
rrl 1475398 n.1741C>T non_coding_transcript_exon_variant 0.21
rrl 1475400 n.1743C>T non_coding_transcript_exon_variant 0.19
rrl 1475401 n.1744A>C non_coding_transcript_exon_variant 0.19
rrl 1475402 n.1745C>A non_coding_transcript_exon_variant 0.19
rrl 1475405 n.1748A>T non_coding_transcript_exon_variant 0.21
rrl 1475419 n.1762C>T non_coding_transcript_exon_variant 0.33
rrl 1475429 n.1772G>T non_coding_transcript_exon_variant 0.33
rrl 1475452 n.1795C>A non_coding_transcript_exon_variant 0.36
rrl 1475479 n.1822C>G non_coding_transcript_exon_variant 0.22
rrl 1475483 n.1826C>T non_coding_transcript_exon_variant 0.19
rrl 1475505 n.1848G>A non_coding_transcript_exon_variant 0.15
rrl 1475526 n.1869C>A non_coding_transcript_exon_variant 0.16
rrl 1475531 n.1874C>T non_coding_transcript_exon_variant 0.18
rrl 1475544 n.1887A>T non_coding_transcript_exon_variant 0.3
rrl 1475545 n.1888T>G non_coding_transcript_exon_variant 0.3
rrl 1475602 n.1945G>C non_coding_transcript_exon_variant 0.32
rrl 1475603 n.1946G>C non_coding_transcript_exon_variant 0.33
rrl 1475604 n.1947A>C non_coding_transcript_exon_variant 0.33
rrl 1475612 n.1955G>C non_coding_transcript_exon_variant 0.35
rrl 1475615 n.1958C>G non_coding_transcript_exon_variant 0.33
rrl 1475616 n.1959A>G non_coding_transcript_exon_variant 0.33
rrl 1475618 n.1961C>T non_coding_transcript_exon_variant 0.33
rrl 1475629 n.1972G>C non_coding_transcript_exon_variant 0.38
rrl 1475637 n.1980T>G non_coding_transcript_exon_variant 0.38
rrl 1475638 n.1981C>G non_coding_transcript_exon_variant 0.4
rrl 1475639 n.1982C>G non_coding_transcript_exon_variant 0.42
rrl 1475643 n.1986C>G non_coding_transcript_exon_variant 0.44
rrl 1475647 n.1990G>C non_coding_transcript_exon_variant 0.44
rrl 1475659 n.2002G>A non_coding_transcript_exon_variant 0.5
rrl 1475753 n.2096C>T non_coding_transcript_exon_variant 0.41
rrl 1475762 n.2105G>T non_coding_transcript_exon_variant 0.41
rrl 1475763 n.2106C>T non_coding_transcript_exon_variant 0.41
rrl 1475764 n.2107A>C non_coding_transcript_exon_variant 0.42
rrl 1475765 n.2108A>G non_coding_transcript_exon_variant 0.43
rrl 1475775 n.2118G>A non_coding_transcript_exon_variant 0.42
rrl 1475988 n.2331A>G non_coding_transcript_exon_variant 0.37
rrl 1475991 n.2334T>C non_coding_transcript_exon_variant 0.33
rrl 1475995 n.2338G>A non_coding_transcript_exon_variant 0.33
rrl 1476030 n.2373A>G non_coding_transcript_exon_variant 0.43
rrl 1476032 n.2375C>A non_coding_transcript_exon_variant 0.43
rrl 1476033 n.2376T>G non_coding_transcript_exon_variant 0.44
rrl 1476035 n.2378G>C non_coding_transcript_exon_variant 0.44
rrl 1476044 n.2387T>G non_coding_transcript_exon_variant 0.41
rrl 1476046 n.2389G>T non_coding_transcript_exon_variant 0.41
rrl 1476047 n.2390G>T non_coding_transcript_exon_variant 0.41
rrl 1476049 n.2392C>T non_coding_transcript_exon_variant 0.41
rrl 1476088 n.2431A>C non_coding_transcript_exon_variant 0.42
rrl 1476099 n.2442A>G non_coding_transcript_exon_variant 0.44
rrl 1476103 n.2446C>G non_coding_transcript_exon_variant 0.43
rrl 1476105 n.2448G>A non_coding_transcript_exon_variant 0.42
rrl 1476106 n.2449A>T non_coding_transcript_exon_variant 0.43
rrl 1476110 n.2453G>C non_coding_transcript_exon_variant 0.41
rrl 1476115 n.2458T>C non_coding_transcript_exon_variant 0.48
rrl 1476131 n.2474C>T non_coding_transcript_exon_variant 0.47
rrl 1476160 n.2503T>C non_coding_transcript_exon_variant 0.48
rrl 1476214 n.2557G>T non_coding_transcript_exon_variant 0.51
rrl 1476215 n.2558C>T non_coding_transcript_exon_variant 0.52
rrl 1476224 n.2567A>G non_coding_transcript_exon_variant 0.48
rrl 1476251 n.2594T>G non_coding_transcript_exon_variant 0.49
rrl 1476256 n.2599A>T non_coding_transcript_exon_variant 0.5
rrl 1476260 n.2603A>G non_coding_transcript_exon_variant 0.51
rrl 1476281 n.2624T>C non_coding_transcript_exon_variant 0.54
rrl 1476297 n.2640C>T non_coding_transcript_exon_variant 0.51
rrl 1476299 n.2642C>T non_coding_transcript_exon_variant 0.51
rrl 1476529 n.2872A>G non_coding_transcript_exon_variant 0.5
rrl 1476540 n.2883C>T non_coding_transcript_exon_variant 0.48
rrl 1476583 n.2926G>A non_coding_transcript_exon_variant 0.44
rrl 1476584 n.2927C>T non_coding_transcript_exon_variant 0.42
rrl 1476594 n.2937C>T non_coding_transcript_exon_variant 0.41
rrl 1476597 n.2940G>A non_coding_transcript_exon_variant 0.41
rrl 1476603 n.2946G>A non_coding_transcript_exon_variant 0.41
rrl 1476628 n.2971T>A non_coding_transcript_exon_variant 0.33
rrl 1476664 n.3007T>C non_coding_transcript_exon_variant 0.32
rrl 1476665 n.3008T>C non_coding_transcript_exon_variant 0.32
rrl 1476674 n.3017T>C non_coding_transcript_exon_variant 0.31
rrl 1476679 n.3022T>C non_coding_transcript_exon_variant 0.31
rrl 1476689 n.3032A>T non_coding_transcript_exon_variant 0.27
rrl 1476690 n.3033C>T non_coding_transcript_exon_variant 0.29
rrl 1476693 n.3036G>A non_coding_transcript_exon_variant 0.29
rrl 1476695 n.3038T>A non_coding_transcript_exon_variant 0.29
rrl 1476716 n.3059A>C non_coding_transcript_exon_variant 0.33
rrl 1476723 n.3066T>A non_coding_transcript_exon_variant 0.28
rrl 1476725 n.3068C>T non_coding_transcript_exon_variant 0.28
rrl 1476726 n.3069A>G non_coding_transcript_exon_variant 0.28
rrl 1476731 n.3074G>A non_coding_transcript_exon_variant 0.27
rrl 1476732 n.3075T>C non_coding_transcript_exon_variant 0.27
rrl 1476746 n.3089T>C non_coding_transcript_exon_variant 0.24
rrl 1476750 n.3093T>C non_coding_transcript_exon_variant 0.23
rrl 1476759 n.3102T>C non_coding_transcript_exon_variant 0.2
rrl 1476770 n.3113T>C non_coding_transcript_exon_variant 0.13
rrl 1476771 n.3114G>A non_coding_transcript_exon_variant 0.13
rpsA 1833694 c.153G>C synonymous_variant 0.13
rpsA 1833709 c.168C>T synonymous_variant 0.15
rpsA 1833724 c.183C>T synonymous_variant 0.13
rpsA 1833727 c.186G>C synonymous_variant 0.13
rpsA 1833730 c.189C>T synonymous_variant 0.13
rpsA 1833734 p.Ala65Ser missense_variant 0.13
rpsA 1833745 c.204G>C synonymous_variant 0.16
rpsA 1833760 c.219C>T synonymous_variant 0.21
rpsA 1833787 c.246C>G synonymous_variant 0.19
rpsA 1833790 c.249T>C synonymous_variant 0.18
rpsA 1833793 c.252C>T synonymous_variant 0.18
rpsA 1833802 c.261A>G synonymous_variant 0.21
rpsA 1833808 c.267G>C synonymous_variant 0.22
rpsA 1833811 c.270G>T synonymous_variant 0.2
rpsA 1833829 c.288A>G synonymous_variant 0.22
rpsA 1833832 c.291G>A synonymous_variant 0.18
rpsA 1833838 c.297G>C synonymous_variant 0.17
rpsA 1833841 c.300C>G synonymous_variant 0.17
rpsA 1833847 c.306C>G synonymous_variant 0.18
rpsA 1833856 c.315A>G synonymous_variant 0.19
rpsA 1833862 c.321G>T synonymous_variant 0.18
rpsA 1833894 p.Ala118Glu missense_variant 0.14
rpsA 1833928 c.387G>C synonymous_variant 0.14
rpsA 1833976 c.435C>T synonymous_variant 0.12
rpsA 1834012 c.471G>T synonymous_variant 0.13
rpsA 1834015 c.474G>C synonymous_variant 0.14
rpsA 1834021 c.480C>T synonymous_variant 0.14
rpsA 1834030 c.489C>G synonymous_variant 0.14
rpsA 1834097 c.556_557delTCinsAG synonymous_variant 0.17
rpsA 1834102 c.561T>C synonymous_variant 0.18
rpsA 1834150 c.609G>C synonymous_variant 0.17
rpsA 1834153 c.612T>C synonymous_variant 0.16
rpsA 1834154 p.Asn205Gln missense_variant 0.15
rpsA 1834157 c.616_618delTTGinsCTA synonymous_variant 0.16
rpsA 1834162 c.621A>G synonymous_variant 0.16
rpsA 1834165 c.624A>G synonymous_variant 0.16
rpsA 1834168 c.627C>T synonymous_variant 0.16
rpsA 1834169 p.Thr210Ala missense_variant 0.18
rpsA 1834177 c.636A>C synonymous_variant 0.21
rpsA 1834213 c.672G>C synonymous_variant 0.23
rpsA 1834231 c.690T>C synonymous_variant 0.19
rpsA 1834234 c.693G>C synonymous_variant 0.18
rpsA 1834240 c.699T>C synonymous_variant 0.19
rpsA 1834249 c.708T>C synonymous_variant 0.22
rpsA 1834261 c.720A>G synonymous_variant 0.18
rpsA 1834264 c.723G>C synonymous_variant 0.18
rpsA 1834279 c.738C>T synonymous_variant 0.16
rpsA 1834297 c.756C>T synonymous_variant 0.13
rpsA 1834348 c.807T>C synonymous_variant 0.17
rpsA 1834361 c.820T>C synonymous_variant 0.17
rpsA 1834366 c.825A>G synonymous_variant 0.16
rpsA 1834396 c.855G>C synonymous_variant 0.23
rpsA 1834411 c.870T>C synonymous_variant 0.23
rpsA 1834423 c.882G>T synonymous_variant 0.28
rpsA 1834451 c.910T>C synonymous_variant 0.25
rpsA 1834456 c.915T>G synonymous_variant 0.26
rpsA 1834468 c.927A>G synonymous_variant 0.25
rpsA 1834489 c.948T>C synonymous_variant 0.19
rpsA 1834498 c.957C>T synonymous_variant 0.22
rpsA 1834513 c.972C>G synonymous_variant 0.22
rpsA 1834520 p.Ala327Ser missense_variant 0.22
rpsA 1834528 c.987T>C synonymous_variant 0.2
rpsA 1834540 c.999G>C synonymous_variant 0.14
rpsA 1834543 c.1002C>G synonymous_variant 0.14
rpsA 1834546 c.1005T>C synonymous_variant 0.14
rpsA 1834554 c.1014_1015delTG frameshift_variant 0.15
rpsA 1834558 c.1017_1018insAG frameshift_variant 0.14
rpsA 1834606 c.1065C>T synonymous_variant 0.14
rpsA 1834609 c.1068T>C synonymous_variant 0.14
rpsA 1834619 c.1078T>C synonymous_variant 0.13
rpsA 1834622 c.1081_1083delTCGinsAGC synonymous_variant 0.14
rpsA 1834633 c.1092A>G synonymous_variant 0.15
rpsA 1834639 c.1098T>C synonymous_variant 0.16
tlyA 1917972 c.33A>G synonymous_variant 1.0
tlyA 1918474 p.Pro179Ser missense_variant 1.0
katG 2154724 p.Arg463Leu missense_variant 1.0
PPE35 2167926 p.Leu896Ser missense_variant 1.0
Rv1979c 2222732 c.432delT frameshift_variant 1.0
Rv1979c 2223293 c.-129A>G upstream_gene_variant 1.0
pncA 2289365 c.-125delC upstream_gene_variant 1.0
ahpC 2726105 c.-88G>A upstream_gene_variant 1.0
ahpC 2726338 p.Val49Gly missense_variant 0.28
Rv2752c 3066008 p.Pro62Ser missense_variant 0.93
ald 3086788 c.-32T>C upstream_gene_variant 1.0
fprA 3473996 c.-11_-10insA upstream_gene_variant 1.0
rpoA 3877857 c.651G>A synonymous_variant 0.12
rpoA 3877875 c.633T>C synonymous_variant 0.13
rpoA 3877878 c.630G>A synonymous_variant 0.15
rpoA 3877887 c.621G>C synonymous_variant 0.17
rpoA 3877893 c.615C>T synonymous_variant 0.17
rpoA 3877905 c.603A>G synonymous_variant 0.16
rpoA 3877908 c.600T>C synonymous_variant 0.17
rpoA 3877920 c.588G>C synonymous_variant 0.17
rpoA 3877923 c.585C>T synonymous_variant 0.16
rpoA 3877926 c.582G>C synonymous_variant 0.16
rpoA 3877962 c.546G>T synonymous_variant 0.14
rpoA 3877965 c.543C>G synonymous_variant 0.15
rpoA 3877971 p.Asp179Glu missense_variant 0.14
rpoA 3878143 p.Gly122Asp missense_variant 0.13
rpoA 3878145 c.363C>G synonymous_variant 0.14
rpoA 3878157 c.351C>G synonymous_variant 0.14
rpoA 3878160 c.348C>G synonymous_variant 0.15
rpoA 3878163 c.345C>T synonymous_variant 0.14
rpoA 3878172 c.336G>C synonymous_variant 0.14
rpoA 3878184 c.324C>T synonymous_variant 0.17
rpoA 3878217 c.291A>G synonymous_variant 0.12
rpoA 3878250 c.258C>G synonymous_variant 0.13
rpoA 3878256 c.252G>C synonymous_variant 0.15
rpoA 3878264 p.Ser82Gly missense_variant 0.17
rpoA 3878271 c.237T>C synonymous_variant 0.16
rpoA 3878283 p.Glu75Asp missense_variant 0.17
rpoA 3878292 c.216T>C synonymous_variant 0.16
rpoA 3878298 c.210A>G synonymous_variant 0.15
rpoA 3878310 c.198G>C synonymous_variant 0.14
rpoA 3878313 c.195G>C synonymous_variant 0.14
clpC1 4038519 p.Arg729Gln missense_variant 0.16
clpC1 4038623 c.2082A>G synonymous_variant 0.14
clpC1 4038640 p.Asp689Asn missense_variant 0.16
clpC1 4038647 c.2058T>C synonymous_variant 0.16
clpC1 4038653 c.2052C>T synonymous_variant 0.15
clpC1 4038695 c.2010C>G synonymous_variant 0.13
clpC1 4038721 c.1984C>T synonymous_variant 0.13
clpC1 4038725 c.1980C>G synonymous_variant 0.15
clpC1 4038740 c.1965G>C synonymous_variant 0.15
clpC1 4038767 c.1938G>C synonymous_variant 0.13
clpC1 4038770 c.1935C>T synonymous_variant 0.13
clpC1 4038773 c.1932T>C synonymous_variant 0.13
clpC1 4038776 c.1929G>A synonymous_variant 0.13
clpC1 4038779 c.1926C>G synonymous_variant 0.13
clpC1 4038782 c.1923G>C synonymous_variant 0.12
clpC1 4038790 c.1915C>T synonymous_variant 0.15
clpC1 4038812 c.1893T>C synonymous_variant 0.19
clpC1 4038815 c.1890G>T synonymous_variant 0.2
clpC1 4038842 c.1863G>C synonymous_variant 0.21
clpC1 4038878 c.1827A>G synonymous_variant 0.24
clpC1 4038884 c.1821C>T synonymous_variant 0.25
clpC1 4038890 c.1815G>A synonymous_variant 0.3
clpC1 4038905 c.1800A>C synonymous_variant 0.28
clpC1 4038908 c.1797C>G synonymous_variant 0.26
clpC1 4038911 c.1794G>T synonymous_variant 0.26
clpC1 4038914 c.1791G>C synonymous_variant 0.26
clpC1 4038917 c.1788C>T synonymous_variant 0.26
clpC1 4038923 c.1782A>G synonymous_variant 0.25
clpC1 4038941 c.1764G>C synonymous_variant 0.24
clpC1 4038953 c.1752A>G synonymous_variant 0.28
clpC1 4038956 c.1749T>C synonymous_variant 0.27
clpC1 4038965 c.1740T>C synonymous_variant 0.29
clpC1 4038971 c.1734T>C synonymous_variant 0.29
clpC1 4038974 c.1731T>C synonymous_variant 0.27
clpC1 4038989 c.1716T>C synonymous_variant 0.25
clpC1 4038997 c.1708T>C synonymous_variant 0.26
clpC1 4039022 c.1683A>G synonymous_variant 0.26
clpC1 4039064 c.1641C>T synonymous_variant 0.28
clpC1 4039067 c.1638G>C synonymous_variant 0.28
clpC1 4039079 c.1626C>G synonymous_variant 0.25
clpC1 4039085 c.1620A>G synonymous_variant 0.28
clpC1 4039091 c.1614G>T synonymous_variant 0.28
clpC1 4039097 c.1608G>T synonymous_variant 0.27
clpC1 4039106 c.1599G>T synonymous_variant 0.26
clpC1 4039109 c.1596C>T synonymous_variant 0.25
clpC1 4039112 c.1593C>G synonymous_variant 0.25
clpC1 4039121 c.1584T>C synonymous_variant 0.25
clpC1 4039142 c.1563A>G synonymous_variant 0.24
clpC1 4039145 c.1560G>C synonymous_variant 0.26
clpC1 4039169 p.Glu512Asp missense_variant 0.22
clpC1 4039172 c.1533A>G synonymous_variant 0.22
clpC1 4039178 c.1527G>C synonymous_variant 0.22
clpC1 4039183 c.1522T>C synonymous_variant 0.21
clpC1 4039187 c.1518G>C synonymous_variant 0.21
clpC1 4039190 c.1515C>G synonymous_variant 0.21
clpC1 4039208 c.1497C>G synonymous_variant 0.25
clpC1 4039220 c.1485G>C synonymous_variant 0.23
clpC1 4039226 c.1479T>C synonymous_variant 0.25
clpC1 4039241 c.1464G>C synonymous_variant 0.26
clpC1 4039274 c.1431G>C synonymous_variant 0.2
clpC1 4039280 c.1425G>T synonymous_variant 0.2
clpC1 4039283 c.1422C>T synonymous_variant 0.19
clpC1 4039286 c.1419T>C synonymous_variant 0.19
clpC1 4039298 c.1407T>C synonymous_variant 0.16
clpC1 4039310 c.1395A>G synonymous_variant 0.17
clpC1 4039313 c.1392C>T synonymous_variant 0.16
clpC1 4039320 p.Ala462Gly missense_variant 0.18
clpC1 4039328 c.1377A>T synonymous_variant 0.16
clpC1 4039337 c.1368A>C synonymous_variant 0.16
clpC1 4039592 c.1113G>C synonymous_variant 0.15
clpC1 4039610 c.1095G>C synonymous_variant 0.16
clpC1 4039622 c.1083C>T synonymous_variant 0.2
clpC1 4039649 c.1056G>C synonymous_variant 0.19
clpC1 4039673 c.1032G>A synonymous_variant 0.18
clpC1 4039682 c.1023C>G synonymous_variant 0.2
clpC1 4039685 c.1020C>T synonymous_variant 0.19
clpC1 4039694 c.1011G>T synonymous_variant 0.19
clpC1 4039724 c.981A>G synonymous_variant 0.15
clpC1 4039733 c.972G>C synonymous_variant 0.14
clpC1 4039907 c.798G>A synonymous_variant 0.14
clpC1 4039991 c.714G>C synonymous_variant 0.14
clpC1 4040015 c.690G>C synonymous_variant 0.14
clpC1 4040021 c.684A>T synonymous_variant 0.12
clpC1 4040444 c.261C>G synonymous_variant 0.13
embC 4242075 p.Arg738Gln missense_variant 1.0
embA 4242643 c.-590C>T upstream_gene_variant 1.0
embB 4249195 c.2682C>A synonymous_variant 1.0
whiB6 4338595 c.-75delG upstream_gene_variant 1.0
gid 4407588 c.615A>G synonymous_variant 1.0
gid 4408175 p.Ala10Pro missense_variant 1.0