ERR1063862
|
HR-TB
|
lineage4.9
|
None
|
ERR751326
|
Other
|
lineage4.9
|
None
|
ERR176779
|
HR-TB
|
lineage4.9
|
None
|
ERR1063859
|
HR-TB
|
La1.7.1;lineage4.9
|
None
|
SRR1183054
|
Sensitive
|
lineage4.9
|
None
|
ERR3276170
|
Other
|
lineage4.1.2.1
|
nl
|
ERR978767
|
RR-TB
|
lineage4.8
|
None
|
ERR4769493
|
Other
|
lineage4.9
|
None
|
SRR8217918
|
HR-TB
|
lineage4.9
|
None
|
ERR1035122
|
Sensitive
|
lineage4.9
|
None
|
ERR978767_ERR978765_ERR978766
|
RR-TB
|
lineage4.8
|
None
|
SAMN02380982
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
SRR11342644
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
ERR3797062
|
RR-TB
|
lineage4.9
|
None
|
ERR4819546
|
HR-TB
|
lineage3
|
None
|
SRR11342696
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
ERR3797047
|
MDR-TB
|
lineage4.9
|
None
|
ERR3445487
|
Other
|
La1.7.X-unk4
|
None
|
ERR4797193
|
HR-TB
|
lineage1.1.2
|
None
|
SRR5341308
|
Sensitive
|
lineage4.9
|
None
|
ERR3797046
|
HR-TB
|
lineage4.9
|
None
|
SRR1180413
|
Sensitive
|
lineage4.9
|
None
|
ERR736834
|
Sensitive
|
lineage4.9
|
None
|
SRR1792022
|
Other
|
La1.8.1
|
None
|
ERR212125
|
HR-TB
|
lineage4.9
|
None
|
SRR1181390
|
Sensitive
|
lineage2.2.1;lineage4.9
|
None
|
ERR4797264
|
Sensitive
|
lineage4.9
|
None
|
ERR2041725
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR5341299
|
HR-TB
|
lineage4.9
|
None
|
ERR4818110
|
Sensitive
|
lineage4.9
|
None
|
ERR4024991
|
Other
|
lineage4.8;lineage4.9
|
None
|
SRR5341456
|
Other
|
lineage4.9
|
None
|
SRR1183965
|
Sensitive
|
lineage4.9
|
None
|
SRR12708419
|
Other
|
lineage4.3.3
|
None
|
ERR176560
|
HR-TB
|
La1.7;lineage4.9
|
None
|
SRR5341412
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR4817840
|
Other
|
lineage3.1.2.2
|
gb
|
ERR4769442
|
Sensitive
|
lineage4.9
|
None
|
SRR10808730
|
Other
|
lineage4.9
|
None
|
ERR4818851
|
RR-TB
|
lineage4.4.1.1
|
None
|
ERR3283055
|
HR-TB
|
lineage4.9
|
None
|
ERR4819462
|
Sensitive
|
lineage4.9
|
None
|
SRR1180355
|
Sensitive
|
lineage4.9
|
None
|
SRR1181256
|
Other
|
lineage4.9
|
None
|
SRR19295647
|
Sensitive
|
lineage4.9
|
None
|
SRR29231479
|
RR-TB
|
lineage4.9
|
None
|
ERR3445502
|
Sensitive
|
lineage4.9;lineage7
|
None
|
SRR12708396
|
MDR-TB
|
lineage4.3.2.1
|
None
|
SRR1180312
|
Sensitive
|
lineage4.9
|
None
|
SRR1049726
|
Other
|
lineage4.1.2.1;lineage4.4.1.1
|
None
|
SRR6046878
|
Other
|
lineage4.9
|
None
|
ERR2693252
|
Sensitive
|
lineage4.9
|
None
|
SRR6045217
|
Sensitive
|
lineage4.9
|
None
|
SRR1049725
|
Other
|
lineage4.1.2.1;lineage4.4.1
|
None
|
ERR4815310
|
Other
|
lineage2.2.1;lineage4.9
|
None
|
SRR7535082
|
Sensitive
|
lineage4.9
|
None
|
SRR6045010
|
Sensitive
|
lineage4.9
|
None
|
ERR4798823
|
HR-TB
|
lineage4
|
None
|
ERR9786911
|
HR-TB
|
lineage4.1.2.1
|
None
|
SRR1158918
|
Sensitive
|
lineage4.9
|
None
|
SRR1181325
|
Sensitive
|
lineage4.9
|
None
|
SRR20969419
|
Sensitive
|
lineage4.5
|
None
|
ERR176651
|
Other
|
lineage4.9
|
None
|
ERR181744
|
HR-TB
|
La3;lineage4.9
|
None
|
ERR4820151
|
Other
|
lineage4.8
|
None
|
ERR6866547
|
Other
|
La1.7;lineage4.9;lineage6
|
None
|
ERR752229
|
Other
|
lineage4.5
|
None
|
ERR323066
|
Sensitive
|
lineage4.9
|
None
|
SRR10808668
|
Sensitive
|
lineage2.2.1
|
None
|
SRR5007161
|
RR-TB
|
lineage4.1.1.3.1;lineage4.9
|
None
|
SRR3675270
|
Other
|
lineage4.9
|
None
|
ERR4818646
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR17732868
|
Sensitive
|
lineage4.5
|
None
|
SRR6044875
|
Sensitive
|
lineage4.9
|
None
|
SRR11342658
|
RR-TB
|
lineage4.1.2
|
None
|
SRR1049673
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR12708409
|
HR-TB
|
lineage4.3.3
|
None
|
SRR9971041
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR502481
|
RR-TB
|
lineage4.9
|
None
|
SRR1159378
|
Other
|
lineage4.9
|
None
|
SRR15315920
|
Sensitive
|
lineage4.5
|
None
|
SRR17732478
|
Sensitive
|
lineage4.5
|
None
|
ERR9119733
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR5535933
|
Other
|
lineage4.9
|
None
|
SRR1792478
|
HR-TB
|
La1.7.1
|
None
|
SRR5341400
|
Sensitive
|
lineage4.9
|
None
|
SRR6045053
|
Other
|
lineage4
|
None
|
SRR6046299
|
Other
|
lineage4.3.1;lineage4.9;lineage6
|
None
|
SRR6046577
|
Other
|
lineage4.6.3;lineage4.9
|
None
|
SRR5341341
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR12708415
|
HR-TB
|
lineage2.2.1
|
None
|
SRR16156832
|
RR-TB
|
lineage2.2;lineage4
|
None
|
SRR12708418
|
HR-TB
|
lineage2.2.1
|
None
|
SRR14801759
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR4815550
|
Other
|
lineage2.2;lineage4.9
|
None
|
ERR067712
|
Sensitive
|
lineage4.9
|
None
|
ERR323115
|
Sensitive
|
lineage4.9
|
None
|
ERR4799025
|
Other
|
lineage4.8
|
None
|
SRR6046492
|
Other
|
lineage4.9
|
None
|
ERR4814734
|
Other
|
lineage1.2.1.1
|
None
|
SRR3675235
|
Sensitive
|
lineage4.9
|
None
|
SRR1175487
|
Sensitive
|
lineage4.9
|
None
|
ERR323045
|
HR-TB
|
lineage1;lineage4.9
|
None
|
ERR502510
|
Sensitive
|
lineage4.9
|
None
|
ERR4769521
|
RR-TB
|
lineage4.9
|
None
|
ERR1063883
|
HR-TB
|
lineage4.9
|
None
|
SRR10315751
|
MDR-TB
|
lineage4.8
|
None
|
ERR4818126
|
Other
|
lineage1.2.2
|
None
|
ERR405219
|
HR-TB
|
La1.7;lineage3.1;lineage4
|
None
|
SRR1181283
|
Sensitive
|
lineage4.9
|
None
|
ERR4818252
|
Sensitive
|
lineage4.1.1.2
|
None
|
ERR4769450
|
Other
|
lineage4.9
|
None
|
ERR4797184
|
Sensitive
|
lineage4.9
|
None
|
SRR10315567
|
HR-TB
|
lineage2.2.1
|
None
|
ERR4819096
|
Other
|
lineage4.4.1.1
|
None
|
SRR10808399
|
Sensitive
|
lineage4.9
|
None
|
SRR12708411
|
HR-TB
|
lineage1.2.2.2
|
None
|
SRR11342653
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4796351
|
Sensitive
|
lineage4.9
|
None
|
SRR11342636
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR5818586
|
RR-TB
|
lineage4.2.2.2
|
None
|
ERR1023525
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR3283021
|
HR-TB
|
lineage4.9
|
None
|
ERR108471
|
HR-TB
|
lineage4.9
|
None
|
SRR1181349
|
Sensitive
|
lineage4
|
None
|
ERR245794
|
HR-TB
|
lineage4.3.4.2.1
|
None
|
SRR5341453
|
Other
|
lineage4.9
|
None
|
SRR12416842
|
HR-TB
|
lineage4.9
|
None
|
ERR1063849
|
HR-TB
|
lineage4.9
|
None
|
ERR3445501
|
HR-TB
|
La1.7.1;La1.7.X-unk4;lineage7
|
None
|
SRR16156697
|
RR-TB
|
lineage2.2.1
|
None
|
SRR1180399
|
Sensitive
|
lineage4.9
|
None
|
SRR11342647
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR5341467
|
Other
|
lineage4.9
|
None
|
SRR11972367
|
Sensitive
|
lineage2.2.1
|
None
|
ERR502470
|
RR-TB
|
lineage4.9
|
None
|
ERR779852
|
Sensitive
|
lineage4.9
|
None
|
ERR9992879
|
XDR-TB
|
lineage4.3.3
|
None
|
SRR3675585
|
Sensitive
|
lineage4.9
|
None
|
SRR5341315
|
Other
|
La1.7;lineage3;lineage4.9;lineage7
|
None
|
SRR5341422
|
HR-TB
|
La1.7;lineage4.9;lineage7
|
None
|
SRR6045892
|
Sensitive
|
lineage4.9
|
None
|
ERR1023502
|
MDR-TB
|
lineage2;lineage4
|
None
|
ERR6359082
|
Other
|
lineage4.9
|
None
|
ERR3283006
|
RR-TB
|
lineage4.9
|
None
|
ERR2513121
|
Sensitive
|
lineage3.1.3
|
None
|
ERR4815815
|
Sensitive
|
lineage4.9
|
None
|
SRR11662690
|
HR-TB
|
lineage4.9
|
None
|
SRR5341469
|
HR-TB
|
lineage4.9
|
None
|
ERR4811493
|
HR-TB
|
lineage4.9
|
None
|
SRR20970016
|
Other
|
lineage2.2
|
None
|
ERR4831621
|
MDR-TB
|
lineage2.2.1.1
|
None
|
ERR3283025
|
MDR-TB
|
La1.7;lineage4.9
|
None
|
SRR1049582
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR5341387
|
Other
|
lineage4.9
|
None
|
ERR4818536
|
Other
|
lineage4.9
|
None
|
ERR4769497
|
Other
|
La1;lineage4.9
|
None
|
ERR5917985
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR5341365
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR176778
|
HR-TB
|
lineage4.9
|
None
|
ERR212034
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR6866022
|
Other
|
lineage4.8;lineage4.9
|
None
|
ERR736875
|
HR-TB
|
lineage4.9
|
None
|
SRR1175474
|
Other
|
lineage4.9
|
None
|
SRR1175513
|
Sensitive
|
lineage4.9
|
None
|
ERR6866807
|
Other
|
lineage4.9
|
None
|
ERR1063858
|
HR-TB
|
lineage4.9
|
None
|
ERR323062
|
Sensitive
|
lineage4.9
|
None
|
ERR3445504
|
Other
|
lineage4.9;lineage6.1.3
|
None
|
SRR11342662
|
MDR-TB
|
lineage4.8.1
|
None
|
SRR1140712
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR1175506
|
Sensitive
|
lineage4.9
|
None
|
SRR14782539
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR137286
|
Other
|
lineage4.9
|
None
|
ERR4769444
|
HR-TB
|
lineage4.9
|
None
|
SRR1180406
|
Sensitive
|
lineage4.9
|
None
|
SRR12708414
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1181403
|
Other
|
lineage4.9
|
None
|
ERR4769417
|
Pre-XDR-TB
|
lineage4.9
|
None
|
ERR4810624
|
MDR-TB
|
lineage2.2
|
None
|
SRR1175127
|
Other
|
lineage2.2.1.2
|
None
|
ERR978765
|
RR-TB
|
lineage4.8
|
None
|
ERR736817
|
HR-TB
|
lineage4.3.4
|
None
|
ERR1063856
|
HR-TB
|
M.canetti;lineage4.9;lineage9
|
None
|
ERR4821143
|
Other
|
lineage4.9
|
None
|
ERR502474
|
RR-TB
|
lineage4.9
|
None
|
ERR502511
|
Sensitive
|
lineage4.9
|
None
|
SRR1180444
|
Sensitive
|
lineage4.9
|
None
|
SRR5341313
|
Sensitive
|
La1.7;lineage4.9;lineage7
|
None
|
ERR1063839
|
MDR-TB
|
La2;lineage2.2
|
None
|
SRR7755655
|
Other
|
lineage4.1.2.1
|
None
|
SRR9970980
|
HR-TB
|
lineage4.1.2
|
None
|
SRR1791747
|
Other
|
La1.8.1
|
None
|
SRR20969708
|
HR-TB
|
lineage2.2
|
None
|
SAMEA3501073
|
RR-TB
|
lineage4.8
|
None
|
ERR6358979
|
Other
|
lineage4.9
|
None
|
SRR11342687
|
RR-TB
|
lineage4.2.2.2
|
None
|
ERR702405
|
Sensitive
|
lineage4.9
|
None
|
SRR1181237
|
Sensitive
|
lineage2.2.1;lineage4
|
None
|
SRR20969731
|
Other
|
lineage2.2.1
|
None
|
ERR736837
|
Pre-XDR-TB
|
lineage4.9
|
None
|
SRR6045548
|
Sensitive
|
lineage4.9
|
None
|
ERR4831617
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR323107
|
Sensitive
|
lineage4.9
|
None
|
SRR11342682
|
Other
|
lineage4.1.2
|
None
|
ERR4798099
|
Other
|
lineage4.9
|
None
|
ERR1063857
|
MDR-TB
|
La2;lineage4.9
|
None
|
ERR1035138
|
MDR-TB
|
lineage2.1;lineage4.9
|
None
|
SRR12708407
|
HR-TB
|
lineage4.3.2.1
|
None
|
SRR10809074
|
Sensitive
|
lineage4.9
|
None
|
SRR5341384
|
HR-TB
|
lineage4.9
|
None
|
SRR11342651
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR5341330
|
Other
|
lineage4.9
|
None
|
SRR1180420
|
Sensitive
|
lineage4.9
|
None
|
SRR6046593
|
Other
|
lineage4.9
|
None
|
SRR7240033
|
Other
|
La1.2;La1.8.1
|
None
|
SRR14801749
|
HR-TB
|
lineage4.9
|
None
|
SRR11342660
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4821811
|
Sensitive
|
lineage4.9
|
None
|
ERR3445503
|
Other
|
La1.7.1;La1.7.X-unk4
|
None
|
SRR7645901
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR161037
|
Other
|
lineage4.9
|
None
|
SAMN02380990
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR502473
|
RR-TB
|
lineage4.9
|
None
|
ERR6866125
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR502478
|
RR-TB
|
lineage4.9
|
None
|
SRR9970981
|
RR-TB
|
lineage4.3.2.1
|
None
|
SRR6044876
|
Sensitive
|
lineage4.9
|
None
|
SRR10808805
|
Other
|
La1;lineage4.9
|
None
|
SRR6511621
|
Sensitive
|
lineage4.9
|
None
|
ERR3273109
|
HR-TB
|
lineage4
|
None
|
SRR10808490
|
Sensitive
|
lineage2.2.1.1
|
None
|
ERR5987263
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR323037
|
Other
|
lineage4.9
|
None
|
ERR978766
|
RR-TB
|
lineage4.8
|
None
|
ERR6866639
|
Other
|
lineage4.9
|
None
|
ERR8479578
|
Sensitive
|
lineage1.1.3.1
|
None
|
SRR14782405
|
HR-TB
|
lineage4.9
|
None
|
SRR3675246
|
Other
|
lineage4.9
|
None
|
ERR473332
|
Other
|
lineage4.9
|
None
|
SRR9970978
|
Sensitive
|
La1;lineage4.1.2
|
None
|
ERR4831117
|
HR-TB
|
lineage4.9;lineage7
|
None
|
ERR1034634
|
HR-TB
|
lineage4.9
|
None
|
ERR4769452
|
Other
|
lineage4.9
|
None
|
ERR4799513
|
HR-TB
|
lineage2.2
|
None
|
SRR1062928
|
Other
|
lineage4.1.2.1;lineage4.9
|
None
|
ERR4819383
|
RR-TB
|
lineage4.9
|
None
|
ERR502517
|
Other
|
lineage5.1.1
|
None
|
SRR9971112
|
Other
|
lineage2.2.1
|
None
|
SRR1181351
|
Sensitive
|
lineage4.9
|
None
|
ERR4796929
|
Sensitive
|
lineage4.9
|
None
|
SRR1062918
|
Other
|
lineage3
|
None
|
SRR11342655
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR736831
|
Other
|
lineage4.9
|
None
|
SRR11342664
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR1180996
|
Sensitive
|
lineage4.9
|
None
|
SRR1181402
|
Sensitive
|
lineage4.9
|
None
|
ERR181824
|
HR-TB
|
lineage4.9
|
None
|
SRR1175491
|
MDR-TB
|
lineage4.3.4.1
|
None
|
ERR4797474
|
Sensitive
|
lineage4.9
|
None
|
SRR11342693
|
MDR-TB
|
lineage4.8.1
|
None
|
SRR6046385
|
Sensitive
|
lineage4.9
|
None
|
ERR4796254
|
Sensitive
|
lineage4.9
|
None
|
SRR6046141
|
Other
|
lineage4.9
|
None
|
SRR1180410
|
Sensitive
|
lineage4.9
|
None
|
ERR3806850
|
HR-TB
|
lineage4.1.2.1
|
None
|
SRR7236177
|
Other
|
La1.8.1
|
None
|
SRR1175472
|
RR-TB
|
lineage4.3.4.1
|
None
|
SRR18549032
|
HR-TB
|
lineage2.2.1.2;lineage7
|
None
|
ERR1199132
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR7645906
|
Other
|
lineage2.2.1
|
None
|
SRR5341373
|
Other
|
lineage4.9
|
None
|
ERR736872
|
HR-TB
|
lineage4.9
|
None
|
ERR4769439
|
HR-TB
|
lineage4.9
|
None
|
SRR1180345
|
Other
|
lineage4.9
|
None
|
SRR1181215
|
Sensitive
|
lineage4.4.1.1.1
|
None
|
SRR12142339
|
HR-TB
|
lineage2.2.1
|
None
|
SRR11342649
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR1063896
|
Sensitive
|
|
None
|
SRR1180300
|
Sensitive
|
lineage4.9
|
None
|
SRR1180391
|
Sensitive
|
lineage4.9
|
None
|
SRR3675520
|
Other
|
La1.7.X-unk4;lineage4.9
|
None
|
ERR4831620
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1180946
|
Sensitive
|
lineage2;lineage4.9
|
None
|
ERR9119669
|
HR-TB
|
lineage4.9
|
None
|
SRR12708413
|
HR-TB
|
lineage4.1.1.3
|
None
|
SRR6046210
|
Other
|
lineage4.9
|
None
|
SRR5341455
|
Sensitive
|
lineage4.9
|
None
|
SRR6046046
|
Other
|
lineage4.9
|
None
|
ERR323108
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR6866410
|
Sensitive
|
lineage4.9
|
None
|
ERR987765
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR11342642
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR1184114
|
Sensitive
|
lineage2.2.1;lineage4.9
|
None
|
SRR5341300
|
HR-TB
|
lineage4.9
|
None
|
ERR108125
|
RR-TB
|
lineage4.9
|
None
|
SRR9971150
|
RR-TB
|
lineage4.8.1
|
None
|
ERR4769508
|
RR-TB
|
lineage4.9
|
None
|
ERR736856
|
Sensitive
|
lineage4.9
|
None
|
SRR14782054
|
Other
|
lineage4.9
|
None
|
ERR181887
|
Other
|
lineage4.9
|
None
|
ERR2446566
|
Other
|
lineage4.9
|
None
|
SRR1062880
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR6045347
|
Other
|
lineage4.9
|
None
|
ERR4821655
|
HR-TB
|
lineage4.9
|
None
|
ERR4799478
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR11465152
|
Sensitive
|
lineage4.3.4.1
|
None
|
ERR124636
|
Sensitive
|
lineage4.9
|
None
|
ERR161039
|
HR-TB
|
La3;lineage4.3.4
|
None
|
ERR216938
|
HR-TB
|
La1.7;lineage4.9
|
None
|
SRR12708370
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR15014655
|
Other
|
M.canetti;lineage1
|
None
|
SRR5341461
|
HR-TB
|
lineage4.9
|
None
|
ERR6359074
|
HR-TB
|
lineage4.9
|
None
|
SRR6789624
|
HR-TB
|
lineage4.1.1.3
|
None
|
SRR12708392
|
Other
|
lineage2.2.1
|
None
|
ERR2041726
|
MDR-TB
|
lineage4.1.2.1
|
None
|