TB-Profiler result

Run: ERR4831621
Summary

Run ID: ERR4831621

Sample name:

Date: 01-04-2023 21:02:54

Number of reads: 650096

Percentage reads mapped: 56.03

Strain: lineage2.2.1.1

Drug-resistance: MDR-TB

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Drug resistance: This table reports drug-resistance associated mutations found in known resistance genes
Drug Resistance Supporting mutations
Lineage Table: The lineage is inferred by analysing lineage specific SNPs
Lineage Family Main Spoligotype RDs Frequency
lineage2 East-Asian Beijing RD105 0.97
lineage2.2 East-Asian (Beijing) Beijing-RD207 RD105;RD207 1.0
lineage2.2.1 East-Asian (Beijing) Beijing-RD181 RD105;RD207;RD181 0.99
lineage2.2.1.1 East-Asian (Beijing) Beijing-RD150 RD105;RD207;RD181;RD150 1.0
Drug resistance-Associated Mutations: This table reports mutations found in candidate resistance genes which have been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs
rpoB 761095 p.Leu430Pro missense_variant 0.86 rifampicin
rpoB 761099 p.Ser431Arg missense_variant 0.14 rifampicin
rpoB 761108 p.Met434Ile missense_variant 0.86 rifampicin
rpsL 781822 p.Lys88Arg missense_variant 0.65 streptomycin
katG 2155168 p.Ser315Thr missense_variant 1.0 isoniazid
embB 4247429 p.Met306Val missense_variant 0.71 ethambutol
Non-Associated Mutations: This table reports mutations found in candidate resistance genes which have not been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction
gyrA 6751 c.-551G>C upstream_gene_variant 0.15
gyrA 6760 c.-542G>C upstream_gene_variant 0.15
gyrA 6769 c.-533C>T upstream_gene_variant 0.15
gyrA 6775 c.-527G>C upstream_gene_variant 0.15
gyrA 6793 c.-509T>C upstream_gene_variant 0.18
gyrB 6797 p.Gly520Thr missense_variant 0.18
gyrA 6808 c.-494C>T upstream_gene_variant 0.18
gyrA 6811 c.-491C>T upstream_gene_variant 0.2
gyrA 6838 c.-464C>G upstream_gene_variant 0.19
gyrA 6841 c.-461T>C upstream_gene_variant 0.16
gyrA 6844 c.-458T>G upstream_gene_variant 0.16
gyrA 6853 c.-449A>G upstream_gene_variant 0.16
gyrA 6859 c.-443T>C upstream_gene_variant 0.17
gyrA 7108 c.-194G>A upstream_gene_variant 0.22
gyrA 7123 c.-179C>G upstream_gene_variant 0.19
gyrA 7126 c.-176G>A upstream_gene_variant 0.19
gyrA 7129 c.-173T>G upstream_gene_variant 0.19
gyrA 7132 c.-170T>G upstream_gene_variant 0.19
gyrA 7135 c.-167G>A upstream_gene_variant 0.21
gyrA 7153 c.-149G>T upstream_gene_variant 0.21
gyrA 7159 c.-143C>T upstream_gene_variant 0.21
gyrA 7162 c.-140C>T upstream_gene_variant 0.21
gyrA 7165 c.-137C>T upstream_gene_variant 0.21
gyrA 7168 c.-134C>G upstream_gene_variant 0.21
gyrA 7178 c.-124T>C upstream_gene_variant 0.21
gyrB 7210 p.Asp657Glu missense_variant 0.16
gyrA 7213 c.-89G>C upstream_gene_variant 0.16
gyrA 7216 c.-86G>A upstream_gene_variant 0.17
gyrA 7225 c.-77T>C upstream_gene_variant 0.17
gyrA 7234 c.-68C>T upstream_gene_variant 0.19
gyrA 7243 c.-59G>A upstream_gene_variant 0.17
gyrA 7246 c.-56T>C upstream_gene_variant 0.17
gyrA 7355 c.54T>C synonymous_variant 0.26
gyrA 7362 p.Glu21Gln missense_variant 1.0
gyrA 7391 c.90C>T synonymous_variant 0.34
gyrA 7394 c.93T>C synonymous_variant 0.35
gyrA 7397 c.96G>C synonymous_variant 0.35
gyrA 7406 c.105G>C synonymous_variant 0.32
gyrA 7412 c.111C>G synonymous_variant 0.32
gyrA 7433 c.132G>A synonymous_variant 0.34
gyrA 7442 c.141G>C synonymous_variant 0.38
gyrA 7457 c.156T>C synonymous_variant 0.36
gyrA 7463 c.162G>C synonymous_variant 0.36
gyrA 7472 c.171T>C synonymous_variant 0.33
gyrA 7475 c.174A>G synonymous_variant 0.33
gyrA 7480 p.Phe60Tyr missense_variant 0.33
gyrA 7484 c.183T>C synonymous_variant 0.32
gyrA 7499 c.198G>C synonymous_variant 0.34
gyrA 7526 c.225G>C synonymous_variant 0.3
gyrA 7532 c.231T>G synonymous_variant 0.3
gyrA 7541 c.240C>G synonymous_variant 0.29
gyrA 7547 c.246C>T synonymous_variant 0.29
gyrA 7565 c.264C>T synonymous_variant 0.29
gyrA 7569 p.Ala90Ser missense_variant 0.29
gyrA 7585 p.Ser95Thr missense_variant 1.0
gyrA 7592 c.291G>C synonymous_variant 0.21
gyrA 7595 c.294C>G synonymous_variant 0.21
gyrA 7607 c.306C>G synonymous_variant 0.27
gyrA 7613 c.312G>A synonymous_variant 0.26
gyrA 7622 c.321C>T synonymous_variant 0.25
gyrA 7631 c.330G>C synonymous_variant 0.27
gyrA 7637 c.336C>A synonymous_variant 0.28
gyrA 7652 c.351C>T synonymous_variant 0.21
gyrA 7658 c.357A>G synonymous_variant 0.15
gyrA 7661 c.360C>T synonymous_variant 0.15
gyrA 7664 c.363T>C synonymous_variant 0.15
gyrA 7667 c.366C>T synonymous_variant 0.16
gyrA 7670 c.369A>G synonymous_variant 0.17
gyrA 7673 c.372G>A synonymous_variant 0.17
gyrA 7676 c.375G>C synonymous_variant 0.17
gyrA 7679 c.378G>C synonymous_variant 0.17
gyrA 7683 c.382_384delAGGinsCGT synonymous_variant 0.15
gyrA 7694 c.393A>G synonymous_variant 0.19
gyrA 7697 c.396C>G synonymous_variant 0.19
gyrA 7706 c.405C>T synonymous_variant 0.2
gyrA 7709 c.408G>C synonymous_variant 0.2
gyrA 7710 c.409T>C synonymous_variant 0.2
gyrA 7728 c.427_429delAGGinsCGC synonymous_variant 0.22
gyrA 7763 c.462T>G synonymous_variant 0.19
gyrA 7775 c.474C>T synonymous_variant 0.17
gyrA 7784 c.483A>G synonymous_variant 0.18
gyrA 7796 c.495G>T synonymous_variant 0.19
gyrA 7799 c.498A>G synonymous_variant 0.2
gyrA 7802 c.501C>G synonymous_variant 0.21
gyrA 7832 c.531G>T synonymous_variant 0.2
gyrA 8168 c.867A>G synonymous_variant 0.14
gyrA 8191 p.Ala297Gly missense_variant 0.18
gyrA 8198 c.897T>C synonymous_variant 0.23
gyrA 8207 c.906T>C synonymous_variant 0.23
gyrA 8210 c.909G>A synonymous_variant 0.22
gyrA 8219 c.918T>C synonymous_variant 0.23
gyrA 8222 c.921C>T synonymous_variant 0.23
gyrA 8225 c.924T>C synonymous_variant 0.24
gyrA 8235 c.934_936delTTAinsCTG synonymous_variant 0.25
gyrA 8240 c.939C>A synonymous_variant 0.23
gyrA 8246 c.945C>G synonymous_variant 0.24
gyrA 8247 p.Ile316Val missense_variant 0.25
gyrA 8253 p.Ile318Leu missense_variant 0.25
gyrA 8267 c.966G>C synonymous_variant 0.25
gyrA 8477 c.1176C>T synonymous_variant 0.18
gyrA 8480 c.1179C>T synonymous_variant 0.18
gyrA 8546 p.Asp415Glu missense_variant 0.17
gyrA 8561 c.1260A>C synonymous_variant 0.22
gyrA 8571 c.1270C>T synonymous_variant 0.21
gyrA 8600 c.1299G>A synonymous_variant 0.2
gyrA 8603 c.1302A>C synonymous_variant 0.21
gyrA 8663 c.1362C>T synonymous_variant 0.16
gyrA 8672 c.1371A>G synonymous_variant 0.18
gyrA 8678 c.1377G>A synonymous_variant 0.18
gyrA 8876 c.1575C>T synonymous_variant 0.27
gyrA 8897 c.1596T>C synonymous_variant 0.16
gyrA 8903 c.1602T>C synonymous_variant 0.2
gyrA 8915 c.1614A>G synonymous_variant 0.18
gyrA 9213 p.Thr638Val missense_variant 0.2
gyrA 9230 c.1929T>C synonymous_variant 0.19
gyrA 9236 c.1935G>C synonymous_variant 0.2
gyrA 9242 c.1941A>C synonymous_variant 0.17
gyrA 9251 c.1950G>C synonymous_variant 0.19
gyrA 9252 p.Val651Ile missense_variant 0.18
gyrA 9267 p.Asn656Gly missense_variant 0.17
gyrA 9275 c.1974G>A synonymous_variant 0.17
gyrA 9293 c.1992G>C synonymous_variant 0.19
gyrA 9296 c.1995T>C synonymous_variant 0.19
gyrA 9304 p.Gly668Asp missense_variant 1.0
fgd1 491067 c.285C>T synonymous_variant 0.15
fgd1 491472 c.690A>G synonymous_variant 0.27
fgd1 491481 c.699C>T synonymous_variant 0.15
fgd1 491490 c.708C>T synonymous_variant 0.37
fgd1 491499 c.717G>C synonymous_variant 0.39
fgd1 491500 p.Glu240Lys missense_variant 0.18
fgd1 491508 c.726A>G synonymous_variant 0.24
fgd1 491512 p.Asn244Glu missense_variant 0.38
fgd1 491523 c.741G>C synonymous_variant 0.16
fgd1 491536 c.754C>T synonymous_variant 0.19
fgd1 491542 c.760T>C synonymous_variant 0.35
fgd1 491547 c.765A>T synonymous_variant 0.22
fgd1 491548 p.Ala256Pro missense_variant 0.18
fgd1 491562 c.780C>T synonymous_variant 0.18
fgd1 491563 c.781_783delAGCinsTCG synonymous_variant 0.33
fgd1 491571 c.789C>T synonymous_variant 0.35
fgd1 491574 c.792C>T synonymous_variant 0.16
fgd1 491595 c.813C>T synonymous_variant 0.38
fgd1 491610 c.828A>G synonymous_variant 0.31
fgd1 491616 c.834A>G synonymous_variant 0.27
fgd1 491620 p.Ile280Val missense_variant 0.27
fgd1 491742 c.960T>C synonymous_variant 1.0
mshA 575842 c.495G>C synonymous_variant 0.15
mshA 575907 p.Ala187Val missense_variant 0.88
ccsA 620358 c.468C>G synonymous_variant 0.15
ccsA 620362 p.Ala158Ser missense_variant 0.15
ccsA 620367 c.477T>C synonymous_variant 0.17
ccsA 620385 c.495G>C synonymous_variant 0.18
ccsA 620388 c.498A>G synonymous_variant 0.19
ccsA 620397 c.507C>G synonymous_variant 0.17
ccsA 620412 c.522T>C synonymous_variant 0.19
ccsA 620415 c.525T>C synonymous_variant 0.19
ccsA 620421 c.531G>T synonymous_variant 0.2
ccsA 620427 c.537C>G synonymous_variant 0.19
ccsA 620439 c.549T>C synonymous_variant 0.2
ccsA 620442 c.552G>C synonymous_variant 0.2
ccsA 620445 c.555A>G synonymous_variant 0.18
ccsA 620454 c.564C>G synonymous_variant 0.16
ccsA 620460 c.570T>C synonymous_variant 0.15
ccsA 620607 c.717T>C synonymous_variant 0.17
ccsA 620619 c.729G>C synonymous_variant 0.18
ccsA 620625 p.Ile245Met missense_variant 1.0
ccsA 620631 c.741T>C synonymous_variant 0.22
ccsA 620649 c.759A>G synonymous_variant 0.22
ccsA 620652 c.762C>G synonymous_variant 0.22
ccsA 620661 c.771C>G synonymous_variant 0.22
ccsA 620694 c.804C>G synonymous_variant 0.21
ccsA 620698 p.Val270Ile missense_variant 0.22
ccsA 620715 c.825C>T synonymous_variant 0.22
ccsA 620730 c.840C>T synonymous_variant 0.2
ccsA 620733 c.843G>C synonymous_variant 0.2
ccsA 620739 c.849A>G synonymous_variant 0.15
rpoB 760235 c.429T>C synonymous_variant 0.19
rpoB 760244 c.438G>C synonymous_variant 0.19
rpoB 760283 c.477G>C synonymous_variant 0.23
rpoB 760298 c.492G>C synonymous_variant 0.24
rpoB 760310 c.504G>C synonymous_variant 0.24
rpoB 760316 c.510C>G synonymous_variant 0.23
rpoB 760325 c.519G>C synonymous_variant 0.19
rpoB 760331 c.525G>C synonymous_variant 0.19
rpoB 760334 c.528G>T synonymous_variant 0.21
rpoB 760340 c.534G>T synonymous_variant 0.21
rpoB 760357 p.Thr184Ser missense_variant 0.14
rpoB 760361 c.555T>C synonymous_variant 0.15
rpoB 760376 p.Asp190Glu missense_variant 0.19
rpoB 760406 c.600G>C synonymous_variant 0.26
rpoB 760407 p.Ser201Gly missense_variant 0.26
rpoB 760415 c.609C>T synonymous_variant 0.25
rpoB 760424 c.618C>G synonymous_variant 0.24
rpoB 760430 c.624T>C synonymous_variant 0.24
rpoB 760457 c.651C>T synonymous_variant 0.25
rpoB 760463 c.657C>T synonymous_variant 0.23
rpoB 760475 c.669A>G synonymous_variant 0.23
rpoB 760478 c.672C>T synonymous_variant 0.24
rpoB 760481 c.675G>T synonymous_variant 0.27
rpoB 760484 c.678A>G synonymous_variant 0.27
rpoB 760502 c.696C>G synonymous_variant 0.25
rpoB 760522 p.Ser239Asn missense_variant 0.26
rpoB 760532 c.726T>C synonymous_variant 0.18
rpoB 760533 p.Val243Thr missense_variant 0.15
rpoB 760541 c.735G>C synonymous_variant 0.15
rpoB 760547 c.741G>C synonymous_variant 0.15
rpoB 760561 c.757_758delCG frameshift_variant 0.17
rpoB 760567 p.Ser254Trp missense_variant 0.17
rpoB 760568 c.762_763insGC frameshift_variant 0.17
rpoB 760571 c.765G>C synonymous_variant 0.18
rpoB 760585 p.Asn260Ser missense_variant 0.22
rpoB 760591 p.Val262Ala missense_variant 0.21
rpoB 760595 c.789C>T synonymous_variant 0.21
rpoB 760596 p.Thr264Pro missense_variant 0.21
rpoB 760611 c.805T>C synonymous_variant 0.19
rpoB 760661 c.855A>C synonymous_variant 0.15
rpoB 760670 c.864G>C synonymous_variant 0.17
rpoB 760674 c.868T>C synonymous_variant 0.19
rpoB 760683 c.877T>C synonymous_variant 0.19
rpoB 760721 c.915C>G synonymous_variant 0.29
rpoB 760724 c.918T>C synonymous_variant 0.3
rpoB 760730 c.924T>C synonymous_variant 0.36
rpoB 760748 c.942C>G synonymous_variant 0.34
rpoB 760751 c.945G>C synonymous_variant 0.34
rpoB 760755 p.His317Asn missense_variant 0.32
rpoB 760759 p.Val318Ala missense_variant 0.32
rpoB 760764 p.Glu320Gln missense_variant 0.33
rpoB 760769 c.963C>G synonymous_variant 0.33
rpoB 760784 c.978G>T synonymous_variant 0.36
rpoB 760793 c.987A>G synonymous_variant 0.37
rpoB 760805 c.999G>C synonymous_variant 0.41
rpoB 760817 c.1011A>G synonymous_variant 0.41
rpoB 760820 c.1014T>C synonymous_variant 0.41
rpoB 760826 c.1020C>G synonymous_variant 0.43
rpoB 760830 c.1024T>C synonymous_variant 0.41
rpoB 760841 c.1035T>C synonymous_variant 0.37
rpoB 760859 c.1053T>C synonymous_variant 0.29
rpoB 760862 c.1056G>C synonymous_variant 0.28
rpoB 760877 c.1071G>C synonymous_variant 0.22
rpoB 760883 c.1077G>C synonymous_variant 0.27
rpoB 760886 c.1080A>G synonymous_variant 0.27
rpoB 760887 p.Thr361Val missense_variant 0.27
rpoB 760910 c.1104C>T synonymous_variant 0.32
rpoB 760916 c.1110C>T synonymous_variant 0.29
rpoB 760919 c.1113C>T synonymous_variant 0.29
rpoB 760925 c.1119T>C synonymous_variant 0.32
rpoB 760928 c.1122G>C synonymous_variant 0.29
rpoB 760931 c.1125C>G synonymous_variant 0.29
rpoB 760946 c.1140A>G synonymous_variant 0.2
rpoB 760965 p.Met387Leu missense_variant 0.16
rpoB 761015 c.1209G>C synonymous_variant 0.24
rpoB 761027 c.1221A>C synonymous_variant 0.25
rpoB 761036 c.1230G>C synonymous_variant 0.25
rpoB 761037 c.1231T>C synonymous_variant 0.25
rpoB 761051 c.1245G>T synonymous_variant 0.2
rpoB 761054 c.1248G>C synonymous_variant 0.21
rpoB 761057 c.1251G>C synonymous_variant 0.2
rpoB 761060 c.1254C>G synonymous_variant 0.2
rpoB 761063 c.1257C>G synonymous_variant 0.2
rpoB 761084 c.1278C>A synonymous_variant 0.15
rpoB 761087 c.1281C>G synonymous_variant 0.18
rpoB 761111 c.1305C>T synonymous_variant 0.14
rpoB 761132 c.1326G>T synonymous_variant 0.23
rpoB 761133 c.1327T>C synonymous_variant 0.24
rpoB 761147 c.1341C>T synonymous_variant 0.2
rpoB 761165 c.1359G>C synonymous_variant 0.14
rpoB 761189 c.1383T>C synonymous_variant 0.2
rpoB 761195 c.1389G>C synonymous_variant 0.21
rpoB 761198 c.1392G>T synonymous_variant 0.21
rpoB 761213 c.1407G>C synonymous_variant 0.27
rpoB 761217 p.Pro471Ser missense_variant 0.27
rpoB 761234 c.1428G>C synonymous_variant 0.31
rpoB 761240 c.1434C>T synonymous_variant 0.31
rpoB 761249 c.1443A>G synonymous_variant 0.34
rpoB 761261 c.1455G>T synonymous_variant 0.32
rpoB 761264 c.1458C>G synonymous_variant 0.29
rpoB 761282 c.1476C>T synonymous_variant 0.27
rpoB 761288 c.1482G>T synonymous_variant 0.26
rpoB 761318 c.1512G>T synonymous_variant 0.22
rpoB 761327 c.1521A>G synonymous_variant 0.22
rpoB 761330 c.1524G>C synonymous_variant 0.2
rpoB 761345 c.1539G>C synonymous_variant 0.18
rpoB 761354 c.1548C>T synonymous_variant 0.18
rpoB 761360 c.1554T>C synonymous_variant 0.17
rpoB 761362 p.Ser519Thr missense_variant 0.17
rpoB 761366 c.1560C>T synonymous_variant 0.17
rpoB 761367 p.Glu521Gln missense_variant 0.17
rpoB 761374 p.Val523Asp missense_variant 0.18
rpoB 761600 c.1794T>C synonymous_variant 0.2
rpoB 761606 c.1800C>G synonymous_variant 0.21
rpoB 761612 c.1806G>T synonymous_variant 0.21
rpoB 761636 c.1830G>T synonymous_variant 0.25
rpoB 761645 c.1839C>G synonymous_variant 0.3
rpoB 761648 c.1842T>C synonymous_variant 0.27
rpoB 761666 c.1860G>C synonymous_variant 0.33
rpoB 761669 c.1863C>T synonymous_variant 0.33
rpoB 761675 c.1869G>T synonymous_variant 0.4
rpoB 761690 c.1884G>C synonymous_variant 0.4
rpoB 761708 c.1902C>T synonymous_variant 0.38
rpoB 761712 p.Val636Ile missense_variant 0.38
rpoB 761718 p.Ala638Ser missense_variant 0.29
rpoB 761723 c.1917A>G synonymous_variant 0.22
rpoB 761726 c.1920A>G synonymous_variant 0.22
rpoB 761727 p.Ser641Ala missense_variant 0.33
rpoB 761733 p.Val643Ile missense_variant 0.3
rpoB 761736 p.Ile644Val missense_variant 0.27
rpoB 761747 c.1941G>C synonymous_variant 0.25
rpoB 761765 c.1959T>C synonymous_variant 0.23
rpoB 761772 p.His656Ala missense_variant 0.17
rpoB 761778 p.Asn658Asp missense_variant 0.17
rpoB 761785 p.Thr660Ser missense_variant 0.18
rpoB 761791 p.Arg662His missense_variant 0.18
rpoB 761813 c.2007T>C synonymous_variant 0.17
rpoB 761828 c.2022C>T synonymous_variant 0.13
rpoB 761834 c.2028T>C synonymous_variant 0.19
rpoB 761847 p.Cys681Arg missense_variant 0.21
rpoB 761852 c.2046C>G synonymous_variant 0.2
rpoB 761864 c.2058G>C synonymous_variant 0.2
rpoB 761867 c.2061C>G synonymous_variant 0.2
rpoB 761868 p.Asp688Gln missense_variant 0.2
rpoB 761873 c.2067A>T synonymous_variant 0.23
rpoB 761885 c.2079T>C synonymous_variant 0.31
rpoB 761891 c.2085G>C synonymous_variant 0.29
rpoB 761892 p.Ile696Val missense_variant 0.27
rpoB 761903 c.2097T>C synonymous_variant 0.29
rpoB 761906 c.2100C>G synonymous_variant 0.31
rpoB 761909 c.2103T>C synonymous_variant 0.31
rpoB 761912 c.2106T>C synonymous_variant 0.31
rpoB 761915 p.Asp703Glu missense_variant 0.31
rpoB 761916 p.Asp704Asn missense_variant 0.29
rpoB 761921 c.2115C>T synonymous_variant 0.29
rpoB 761930 c.2124G>C synonymous_variant 0.33
rpoB 761948 c.2142G>C synonymous_variant 0.29
rpoB 761954 c.2148C>G synonymous_variant 0.26
rpoB 762008 c.2202C>T synonymous_variant 0.33
rpoB 762014 c.2208C>T synonymous_variant 0.36
rpoB 762047 c.2241G>A synonymous_variant 0.43
rpoB 762053 c.2247T>C synonymous_variant 0.45
rpoB 762062 c.2256T>C synonymous_variant 0.45
rpoB 762065 c.2259T>C synonymous_variant 0.43
rpoB 762083 c.2277T>C synonymous_variant 0.45
rpoB 762086 c.2280G>C synonymous_variant 0.48
rpoB 762101 c.2295C>G synonymous_variant 0.48
rpoB 762114 p.Ile770Val missense_variant 0.41
rpoB 762131 c.2325C>G synonymous_variant 0.42
rpoB 762137 c.2331C>T synonymous_variant 0.42
rpoB 762140 c.2334G>C synonymous_variant 0.4
rpoB 762143 c.2337T>C synonymous_variant 0.41
rpoB 762149 c.2343G>C synonymous_variant 0.39
rpoB 762158 c.2352G>C synonymous_variant 0.39
rpoB 762167 c.2361T>C synonymous_variant 0.39
rpoB 762176 c.2370T>C synonymous_variant 0.37
rpoB 762185 c.2379G>C synonymous_variant 0.39
rpoB 762233 c.2427G>C synonymous_variant 0.41
rpoB 762245 c.2439G>C synonymous_variant 0.38
rpoB 762284 c.2478G>T synonymous_variant 0.3
rpoB 762293 c.2487T>C synonymous_variant 0.29
rpoB 762308 c.2502G>C synonymous_variant 0.26
rpoB 762317 c.2511A>G synonymous_variant 0.24
rpoB 762329 c.2523G>C synonymous_variant 0.27
rpoB 762338 c.2532T>C synonymous_variant 0.22
rpoB 762341 c.2535G>C synonymous_variant 0.22
rpoB 762347 c.2541T>C synonymous_variant 0.21
rpoB 762350 c.2544C>T synonymous_variant 0.21
rpoB 762362 p.Glu852Asp missense_variant 0.27
rpoB 762369 c.2563T>C synonymous_variant 0.3
rpoC 762374 c.-996G>C upstream_gene_variant 0.33
rpoC 762395 c.-975G>C upstream_gene_variant 0.33
rpoC 762398 c.-972T>C upstream_gene_variant 0.33
rpoC 762401 c.-969G>C upstream_gene_variant 0.32
rpoC 762404 c.-966T>C upstream_gene_variant 0.35
rpoC 762410 c.-960T>C upstream_gene_variant 0.39
rpoC 762416 c.-954A>G upstream_gene_variant 0.41
rpoC 762434 c.-936T>C upstream_gene_variant 0.45
rpoC 762443 c.-927G>C upstream_gene_variant 0.42
rpoC 762449 c.-921C>A upstream_gene_variant 0.4
rpoC 762452 c.-918G>C upstream_gene_variant 0.42
rpoC 762470 c.-900G>C upstream_gene_variant 0.39
rpoC 762491 c.-879T>C upstream_gene_variant 0.42
rpoC 762509 c.-861T>G upstream_gene_variant 0.33
rpoB 762510 p.Ala902Pro missense_variant 0.33
rpoC 762515 c.-855C>T upstream_gene_variant 0.33
rpoC 762533 c.-837T>C upstream_gene_variant 0.26
rpoC 762536 c.-834T>C upstream_gene_variant 0.26
rpoC 762537 c.-833T>C upstream_gene_variant 0.26
rpoC 762551 c.-819C>T upstream_gene_variant 0.24
rpoC 762560 c.-810A>T upstream_gene_variant 0.17
rpoB 762795 p.Asp997Asn missense_variant 0.17
rpoC 762818 c.-552C>G upstream_gene_variant 0.25
rpoC 762827 c.-543G>C upstream_gene_variant 0.29
rpoC 762833 c.-537C>T upstream_gene_variant 0.29
rpoC 762839 c.-531G>A upstream_gene_variant 0.29
rpoC 762857 c.-513C>G upstream_gene_variant 0.36
rpoC 762863 c.-507T>C upstream_gene_variant 0.33
rpoB 762879 p.Met1025Leu missense_variant 0.28
rpoC 762920 c.-450C>T upstream_gene_variant 0.33
rpoC 762929 c.-441G>C upstream_gene_variant 0.34
rpoC 762959 c.-411G>C upstream_gene_variant 0.37
rpoC 762962 c.-408C>T upstream_gene_variant 0.38
rpoC 762995 c.-375G>T upstream_gene_variant 0.37
rpoC 763004 c.-366G>A upstream_gene_variant 0.37
rpoC 763007 c.-363C>T upstream_gene_variant 0.37
rpoC 763028 c.-342T>C upstream_gene_variant 0.36
rpoC 763031 c.-339T>G upstream_gene_variant 1.0
rpoC 763053 c.-317T>C upstream_gene_variant 0.38
rpoC 763070 c.-300T>C upstream_gene_variant 0.32
rpoC 763085 c.-285C>G upstream_gene_variant 0.29
rpoC 763103 c.-267G>C upstream_gene_variant 0.34
rpoC 763115 c.-255T>C upstream_gene_variant 0.32
rpoC 763127 c.-243G>C upstream_gene_variant 0.27
rpoC 763130 c.-240G>A upstream_gene_variant 0.23
rpoC 763133 c.-237G>C upstream_gene_variant 0.22
rpoC 763136 c.-234C>T upstream_gene_variant 0.24
rpoC 763142 c.-228C>G upstream_gene_variant 0.24
rpoC 763160 c.-210G>T upstream_gene_variant 0.23
rpoC 763166 c.-204A>G upstream_gene_variant 0.24
rpoC 763169 c.-201A>G upstream_gene_variant 0.25
rpoC 763190 c.-180C>T upstream_gene_variant 0.22
rpoC 763199 c.-171G>C upstream_gene_variant 0.14
rpoC 763217 c.-153G>C upstream_gene_variant 0.15
rpoC 763226 c.-144A>G upstream_gene_variant 0.15
rpoB 763227 p.Leu1141Met missense_variant 0.15
rpoC 763232 c.-138C>T upstream_gene_variant 0.16
rpoB 763235 p.Glu1143Asp missense_variant 0.16
rpoB 763241 p.Glu1145Asp missense_variant 0.16
rpoC 763408 c.39T>C synonymous_variant 0.14
rpoC 763414 c.45T>C synonymous_variant 0.16
rpoC 763432 p.Arg21Ser missense_variant 0.15
rpoC 763433 p.Gln22Asn missense_variant 0.15
rpoC 763443 p.Tyr25Phe missense_variant 0.18
rpoC 763456 c.87A>G synonymous_variant 0.24
rpoC 763468 c.99G>C synonymous_variant 0.3
rpoC 763486 c.117T>C synonymous_variant 0.44
rpoC 763492 c.123G>T synonymous_variant 0.44
rpoC 763528 c.159G>A synonymous_variant 0.48
rpoC 763546 c.177A>G synonymous_variant 0.48
rpoC 763558 c.189C>T synonymous_variant 0.44
rpoC 763570 c.201G>C synonymous_variant 0.47
rpoC 763573 c.204G>C synonymous_variant 0.48
rpoC 763588 c.219C>T synonymous_variant 0.44
rpoC 763594 c.225C>T synonymous_variant 0.48
rpoC 763603 c.234C>T synonymous_variant 0.44
rpoC 763615 c.246G>C synonymous_variant 0.42
rpoC 763618 c.249C>T synonymous_variant 0.42
rpoC 763633 c.264T>C synonymous_variant 0.4
rpoC 763660 c.291T>G synonymous_variant 0.34
rpoC 763666 c.297G>A synonymous_variant 0.35
rpoC 763675 c.306C>G synonymous_variant 0.35
rpoC 763702 c.333C>G synonymous_variant 0.29
rpoC 763709 c.340C>T synonymous_variant 0.34
rpoC 763714 c.345G>C synonymous_variant 0.36
rpoC 763717 c.348T>C synonymous_variant 0.32
rpoC 763723 c.354G>C synonymous_variant 0.3
rpoC 763732 c.363C>T synonymous_variant 0.31
rpoC 763741 c.372C>T synonymous_variant 0.27
rpoC 763747 c.378G>A synonymous_variant 0.27
rpoC 763765 c.396T>G synonymous_variant 0.32
rpoC 763792 p.Glu141Asp missense_variant 0.33
rpoC 763807 c.438T>C synonymous_variant 0.32
rpoC 763813 c.444C>G synonymous_variant 0.28
rpoC 763831 c.462A>G synonymous_variant 0.24
rpoC 763837 c.468G>C synonymous_variant 0.23
rpoC 763840 c.471G>C synonymous_variant 0.25
rpoC 763858 c.489A>G synonymous_variant 0.34
rpoC 763861 c.492C>T synonymous_variant 0.39
rpoC 763872 p.Gly168Ala missense_variant 0.41
rpoC 763876 p.Glu169Asp missense_variant 0.4
rpoC 763879 c.510A>G synonymous_variant 0.4
rpoC 763882 c.513G>A synonymous_variant 0.39
rpoC 763891 c.522G>C synonymous_variant 0.35
rpoC 763894 c.525A>G synonymous_variant 0.35
rpoC 763900 c.531G>C synonymous_variant 0.36
rpoC 763921 c.552G>C synonymous_variant 0.32
rpoC 763924 c.555G>A synonymous_variant 0.34
rpoC 763930 c.561G>A synonymous_variant 0.29
rpoC 763933 c.564C>T synonymous_variant 0.26
rpoC 763940 p.Ala191Ser missense_variant 0.25
rpoC 763945 c.576T>C synonymous_variant 0.23
rpoC 763947 p.Ala193Val missense_variant 0.23
rpoC 763951 c.582G>C synonymous_variant 0.22
rpoC 763960 c.591T>G synonymous_variant 0.25
rpoC 763969 c.600C>T synonymous_variant 0.23
rpoC 763978 c.609C>T synonymous_variant 0.23
rpoC 763987 c.618C>T synonymous_variant 0.23
rpoC 763991 p.Ile208Leu missense_variant 0.24
rpoC 763996 c.627T>C synonymous_variant 0.19
rpoC 764005 c.636G>C synonymous_variant 0.15
rpoC 764197 c.828G>C synonymous_variant 0.14
rpoC 764203 c.834G>C synonymous_variant 0.14
rpoC 764215 c.846A>C synonymous_variant 0.15
rpoC 764217 p.Asn283Ser missense_variant 0.15
rpoC 764239 c.870T>G synonymous_variant 0.22
rpoC 764254 c.885G>C synonymous_variant 0.3
rpoC 764257 c.888G>C synonymous_variant 0.29
rpoC 764263 c.894G>C synonymous_variant 0.23
rpoC 764266 c.897T>C synonymous_variant 0.27
rpoC 764272 c.903G>C synonymous_variant 0.27
rpoC 764278 c.909A>G synonymous_variant 0.27
rpoC 764293 c.924G>C synonymous_variant 0.27
rpoC 764297 p.Met310Leu missense_variant 0.25
rpoC 764344 c.975C>T synonymous_variant 0.25
rpoC 764353 c.984G>T synonymous_variant 0.26
rpoC 764365 c.996C>T synonymous_variant 0.3
rpoC 764371 c.1002G>C synonymous_variant 0.29
rpoC 764380 c.1011G>C synonymous_variant 0.34
rpoC 764387 c.1018T>C synonymous_variant 0.33
rpoC 764405 c.1036_1038delAGGinsCGC synonymous_variant 0.33
rpoC 764431 c.1062G>C synonymous_variant 0.35
rpoC 764434 c.1065A>G synonymous_variant 0.33
rpoC 764435 c.1066_1068delAGGinsCGA synonymous_variant 0.35
rpoC 764446 c.1077T>C synonymous_variant 0.41
rpoC 764449 c.1080G>C synonymous_variant 0.41
rpoC 764458 c.1089G>C synonymous_variant 0.43
rpoC 764461 c.1092A>G synonymous_variant 0.43
rpoC 764485 c.1116G>C synonymous_variant 0.5
rpoC 764491 c.1122G>T synonymous_variant 0.48
rpoC 764497 c.1128A>G synonymous_variant 0.42
rpoC 764500 c.1131C>G synonymous_variant 0.4
rpoC 764512 c.1143G>T synonymous_variant 0.31
rpoC 764521 c.1152T>C synonymous_variant 0.36
rpoC 764527 c.1158C>T synonymous_variant 0.26
rpoC 764536 c.1167G>T synonymous_variant 0.26
rpoC 764539 c.1170C>G synonymous_variant 0.26
rpoC 764575 c.1206T>G synonymous_variant 0.36
rpoC 764605 c.1236G>C synonymous_variant 0.43
rpoC 764611 c.1242G>T synonymous_variant 0.43
rpoC 764623 c.1254C>G synonymous_variant 0.4
rpoC 764626 c.1257C>T synonymous_variant 0.38
rpoC 764632 c.1263T>C synonymous_variant 0.38
rpoC 764650 c.1281G>T synonymous_variant 0.41
rpoC 764701 c.1332C>G synonymous_variant 0.38
rpoC 764713 c.1344G>T synonymous_variant 0.38
rpoC 764716 c.1347G>C synonymous_variant 0.37
rpoC 764746 c.1377G>T synonymous_variant 0.34
rpoC 764752 c.1383G>C synonymous_variant 0.31
rpoC 764758 c.1389C>G synonymous_variant 0.3
rpoC 764764 c.1395T>C synonymous_variant 0.29
rpoC 764803 c.1434C>T synonymous_variant 0.21
rpoC 764809 c.1440C>T synonymous_variant 0.23
rpoC 764815 c.1446A>G synonymous_variant 0.19
rpoC 764824 c.1455T>C synonymous_variant 0.18
rpoC 764827 c.1458G>C synonymous_variant 0.18
rpoC 764858 c.1489T>C synonymous_variant 0.26
rpoC 764869 c.1500C>T synonymous_variant 0.25
rpoC 764875 c.1506C>T synonymous_variant 0.24
rpoC 764878 c.1509C>G synonymous_variant 0.24
rpoC 764887 c.1518G>C synonymous_variant 0.25
rpoC 764888 c.1519T>C synonymous_variant 0.25
rpoC 764911 c.1542A>G synonymous_variant 0.24
rpoC 764912 p.Met515Gln missense_variant 0.24
rpoC 764935 c.1566T>C synonymous_variant 0.23
rpoC 764948 c.1579T>C synonymous_variant 0.23
rpoC 764968 c.1599T>C synonymous_variant 0.16
rpoC 765338 p.Gln657Lys missense_variant 0.17
rpoC 765352 c.1983G>C synonymous_variant 0.2
rpoC 765357 p.Met663Thr missense_variant 0.2
rpoC 765361 c.1992C>G synonymous_variant 0.21
rpoC 765383 p.Met672Leu missense_variant 0.18
rpoC 765403 c.2034G>C synonymous_variant 0.24
rpoC 765404 p.Leu679Lys missense_variant 0.24
rpoC 765409 c.2040T>C synonymous_variant 0.21
rpoC 765412 c.2043T>C synonymous_variant 0.2
rpoC 765425 p.Lys686Glu missense_variant 0.25
rpoC 765445 c.2076G>C synonymous_variant 0.23
rpoC 765452 p.Ala695Arg missense_variant 0.25
rpoC 765466 c.2097C>T synonymous_variant 0.3
rpoC 765478 c.2109T>C synonymous_variant 0.31
rpoC 765480 p.Tyr704Phe missense_variant 0.28
rpoC 765496 c.2127C>G synonymous_variant 0.26
rpoC 765499 c.2130C>G synonymous_variant 0.26
rpoC 765529 c.2160C>T synonymous_variant 0.24
rpoC 765533 p.Tyr722His missense_variant 0.25
rpoC 765547 c.2178C>T synonymous_variant 0.19
rpoC 765548 c.2179_2181delAGCinsTCG synonymous_variant 0.19
rpoC 765553 c.2184C>T synonymous_variant 0.19
rpoC 765556 c.2187G>C synonymous_variant 0.2
rpoC 765562 c.2193G>C synonymous_variant 0.21
rpoC 765577 c.2208G>T synonymous_variant 0.17
rpoC 765796 c.2427C>T synonymous_variant 0.19
rpoC 765800 p.Phe811Leu missense_variant 0.18
rpoC 765811 c.2442T>G synonymous_variant 0.2
rpoC 765814 c.2445A>C synonymous_variant 0.2
rpoC 765817 c.2448G>C synonymous_variant 0.2
rpoC 765823 c.2454C>A synonymous_variant 0.2
rpoC 765826 c.2457T>C synonymous_variant 0.27
rpoC 765835 c.2466C>T synonymous_variant 0.29
rpoC 765871 c.2502T>C synonymous_variant 0.32
rpoC 765875 p.Val836Ile missense_variant 0.32
rpoC 765886 c.2517C>G synonymous_variant 0.37
rpoC 765904 c.2535C>G synonymous_variant 0.38
rpoC 765908 c.2539C>T synonymous_variant 0.39
rpoC 765934 c.2565C>T synonymous_variant 0.41
rpoC 765940 c.2571A>T synonymous_variant 0.39
rpoC 765946 c.2577C>T synonymous_variant 0.38
rpoC 765947 c.2578T>C synonymous_variant 0.39
rpoC 765952 c.2583G>C synonymous_variant 0.39
rpoC 765961 c.2592G>T synonymous_variant 0.38
rpoC 765962 c.2593T>C synonymous_variant 0.38
rpoC 765967 c.2598C>T synonymous_variant 0.38
rpoC 765979 c.2610C>G synonymous_variant 0.36
rpoC 765982 c.2613C>T synonymous_variant 0.36
rpoC 765994 c.2625A>T synonymous_variant 0.33
rpoC 766012 c.2643C>G synonymous_variant 0.32
rpoC 766021 c.2652G>C synonymous_variant 0.29
rpoC 766027 c.2658G>T synonymous_variant 0.28
rpoC 766034 p.His889Thr missense_variant 0.22
rpoC 766042 c.2673C>T synonymous_variant 0.16
rpoC 766043 p.Gln892Glu missense_variant 0.16
rpoC 766696 p.Gln1109His missense_variant 0.2
rpoC 766714 c.3345G>C synonymous_variant 0.21
rpoC 766717 c.3348C>G synonymous_variant 0.21
rpoC 766720 c.3351C>T synonymous_variant 0.22
rpoC 766726 c.3357T>C synonymous_variant 0.25
rpoC 766738 c.3369G>T synonymous_variant 0.29
rpoC 766741 c.3372G>C synonymous_variant 0.31
rpoC 766765 c.3396A>C synonymous_variant 0.19
rpoC 766771 c.3402G>C synonymous_variant 0.17
rpoC 766774 c.3405T>C synonymous_variant 0.17
rpoC 766775 p.Arg1136Asn missense_variant 0.17
rpoC 766798 c.3429C>G synonymous_variant 0.21
rpoC 766804 c.3435A>G synonymous_variant 0.17
rpoC 766807 c.3438T>C synonymous_variant 0.18
rpoC 766837 c.3468G>C synonymous_variant 0.16
rpoC 766843 c.3474T>C synonymous_variant 0.15
rpoC 766942 c.3573C>T synonymous_variant 0.15
rpoC 766945 c.3576A>C synonymous_variant 0.15
rpoC 766948 c.3579G>C synonymous_variant 0.15
rpoC 766963 c.3594T>C synonymous_variant 0.17
rpoC 766981 c.3612T>C synonymous_variant 0.14
rpoC 766996 c.3627C>T synonymous_variant 0.15
rpoC 767002 c.3633G>C synonymous_variant 0.15
rpoC 767020 c.3651C>G synonymous_variant 0.17
rpoC 767098 c.3729T>C synonymous_variant 0.21
rpoC 767104 c.3735C>G synonymous_variant 0.19
rpoC 767105 p.Asn1246Gln missense_variant 0.18
rpoC 767119 c.3750A>G synonymous_variant 0.25
rpoC 767134 c.3765C>T synonymous_variant 0.26
rpoC 767138 c.3769C>T synonymous_variant 0.27
rpoC 767158 c.3789T>C synonymous_variant 0.28
rpoC 767162 p.Asn1265Ala missense_variant 0.33
rpoC 767167 c.3798C>T synonymous_variant 0.36
rpoC 767174 p.Asn1269Asp missense_variant 0.42
rpoC 767180 p.Ala1271Gln missense_variant 0.42
rpoC 767191 c.3822C>G synonymous_variant 0.42
rpoC 767197 c.3828G>A synonymous_variant 0.36
rpoC 767221 c.3852C>G synonymous_variant 0.25
rpoC 767230 c.3861G>C synonymous_variant 0.19
rpoC 767233 c.3864T>C synonymous_variant 0.19
mmpL5 775639 p.Ile948Val missense_variant 1.0
mmpL5 775814 c.2667C>G synonymous_variant 0.25
mmpL5 775817 c.2664T>C synonymous_variant 0.31
mmpL5 775826 c.2655G>C synonymous_variant 0.24
mmpL5 775829 c.2652C>G synonymous_variant 0.41
mmpL5 775832 p.Ala883Ser missense_variant 0.18
mmpL5 775835 c.2646C>G synonymous_variant 0.2
mmpL5 775838 c.2643G>C synonymous_variant 0.25
mmpL5 775847 c.2634G>A synonymous_variant 0.16
mmpL5 775851 p.Ser877Thr missense_variant 0.25
mmpL5 775856 c.2625T>C synonymous_variant 0.36
mmpL5 775865 c.2616T>C synonymous_variant 0.26
mmpL5 775877 c.2604C>G synonymous_variant 0.16
mmpL5 775883 p.Ile866Leu missense_variant 0.16
mmpL5 775886 c.2595A>G synonymous_variant 0.25
mmpL5 775892 c.2589C>T synonymous_variant 0.15
mmpL5 775904 c.2577G>A synonymous_variant 0.24
mmpL5 775909 p.Leu858Phe missense_variant 0.15
mmpL5 775915 p.Ala856Ser missense_variant 0.15
mmpL5 775921 c.2560C>T synonymous_variant 0.18
mmpL5 775924 c.2557C>T synonymous_variant 0.18
mmpL5 775940 c.2541C>T synonymous_variant 0.17
mmpL5 775951 c.2530C>T synonymous_variant 0.21
mmpL5 775966 p.Ala839Ser missense_variant 0.2
mmpL5 775970 c.2511G>C synonymous_variant 0.17
mmpL5 775975 c.2506T>C synonymous_variant 0.17
mmpL5 775981 p.Leu834Met missense_variant 0.2
mmpL5 775997 c.2484T>G synonymous_variant 0.16
mmpL5 776000 p.Leu827Ile missense_variant 0.17
mmpL5 776005 p.Ile826Leu missense_variant 0.23
mmpL5 776024 c.2457G>C synonymous_variant 0.23
mmpL5 776030 c.2451G>C synonymous_variant 0.22
mmpL5 776053 c.2428T>C synonymous_variant 0.2
mmpL5 776075 c.2406C>G synonymous_variant 0.17
mmpL5 776100 p.Thr794Ile missense_variant 1.0
mmpL5 776182 p.Asp767Asn missense_variant 0.95
mmpL5 777117 p.Asp455Gly missense_variant 1.0
mmpS5 779615 c.-710C>G upstream_gene_variant 1.0
rpsL 781395 c.-165T>C upstream_gene_variant 1.0
rpsL 781572 p.Gln5Asn missense_variant 0.17
rpsL 781595 c.36T>C synonymous_variant 0.21
rpsL 781598 c.39G>C synonymous_variant 0.22
rpsL 781605 p.Ile16Val missense_variant 0.22
rpsL 781608 p.Ser17Ala missense_variant 0.23
rpsL 781628 c.69T>C synonymous_variant 0.24
rpsL 781631 c.72G>C synonymous_variant 0.25
rpsL 781649 c.90T>C synonymous_variant 0.31
rpsL 781655 c.96T>C synonymous_variant 0.34
rpsL 781658 c.99A>G synonymous_variant 0.35
rpsL 781682 c.123T>C synonymous_variant 0.46
rpsL 781709 c.150G>C synonymous_variant 0.44
rpsL 781715 c.156T>C synonymous_variant 0.38
rpsL 781728 c.169T>C synonymous_variant 0.35
rpsL 781732 c.174_177delGAGT frameshift_variant 0.35
rpsL 781739 c.180_181insCGGC frameshift_variant 0.34
rpsL 781742 c.183C>T synonymous_variant 0.33
rpsL 781751 c.192G>C synonymous_variant 0.34
rpsL 781760 c.201T>C synonymous_variant 0.34
rpsL 781772 c.213C>T synonymous_variant 0.41
rpsL 781808 c.249C>T synonymous_variant 0.32
rpsL 781814 c.255C>T synonymous_variant 0.32
rpsL 781817 c.258G>T synonymous_variant 0.32
rpsL 781829 c.270G>C synonymous_variant 0.17
rpsL 781832 c.273T>C synonymous_variant 0.17
rpsL 781838 c.279G>C synonymous_variant 0.17
rpsL 781841 c.282C>T synonymous_variant 0.15
rpsL 781859 c.300T>G synonymous_variant 0.14
rpsL 781871 c.312G>C synonymous_variant 0.15
rpsL 781892 c.333A>G synonymous_variant 0.25
rpsL 781898 c.339A>C synonymous_variant 0.26
rpsL 781901 c.342C>T synonymous_variant 0.26
rpsL 781907 c.348T>C synonymous_variant 0.26
rpsL 781916 c.357T>C synonymous_variant 0.26
rpsL 781929 p.Gly124Ser missense_variant 0.23
rplC 800612 c.-197A>G upstream_gene_variant 0.35
rplC 800618 c.-191T>C upstream_gene_variant 0.36
rplC 800633 c.-176T>C upstream_gene_variant 0.35
rplC 800645 c.-164C>G upstream_gene_variant 0.25
rplC 800648 c.-161A>G upstream_gene_variant 0.19
rplC 800654 c.-155T>C upstream_gene_variant 0.22
fbiC 1303509 c.579G>C synonymous_variant 0.19
fbiC 1303512 c.582T>G synonymous_variant 0.19
fbiC 1303531 p.Met201Leu missense_variant 0.17
fbiC 1303536 c.606G>A synonymous_variant 0.17
fbiC 1303539 c.609G>C synonymous_variant 0.14
fbiC 1303545 c.615A>G synonymous_variant 0.14
fbiC 1304198 p.Gly423Val missense_variant 0.14
fbiC 1304580 c.1650T>C synonymous_variant 0.19
fbiC 1304613 c.1683T>C synonymous_variant 0.21
fbiC 1304634 c.1704C>G synonymous_variant 0.21
fbiC 1304640 c.1710A>C synonymous_variant 0.22
fbiC 1304646 c.1716T>C synonymous_variant 0.19
fbiC 1304670 c.1740G>C synonymous_variant 0.23
fbiC 1304671 p.Val581Thr missense_variant 0.21
fbiC 1304675 p.Gly582Asp missense_variant 0.2
fbiC 1304694 c.1764A>G synonymous_variant 0.23
fbiC 1304715 c.1785G>T synonymous_variant 0.22
fbiC 1304724 c.1794A>G synonymous_variant 0.18
fbiC 1304727 c.1797A>C synonymous_variant 0.17
fbiC 1304742 c.1812T>C synonymous_variant 0.13
fbiC 1304757 c.1827A>G synonymous_variant 0.13
fbiC 1304760 c.1830G>C synonymous_variant 0.14
fbiC 1304769 c.1839C>G synonymous_variant 0.13
Rv1258c 1406760 c.580_581insC frameshift_variant 1.0
atpE 1461132 p.Val30Ile missense_variant 0.16
atpE 1461137 c.93C>G synonymous_variant 0.16
atpE 1461149 c.105T>G synonymous_variant 0.17
atpE 1461155 c.111C>G synonymous_variant 0.19
atpE 1461159 p.Val39Ile missense_variant 0.19
atpE 1461167 c.123G>T synonymous_variant 0.19
atpE 1461170 c.126A>G synonymous_variant 0.19
atpE 1461179 c.135G>C synonymous_variant 0.17
atpE 1461182 c.138A>G synonymous_variant 0.17
atpE 1461185 c.141G>C synonymous_variant 0.17
atpE 1461224 c.180T>G synonymous_variant 0.17
atpE 1461227 c.183G>A synonymous_variant 0.17
atpE 1461230 c.186G>C synonymous_variant 0.17
atpE 1461233 c.189A>G synonymous_variant 0.17
atpE 1461251 c.207G>C synonymous_variant 0.2
rrs 1471659 n.-187C>T upstream_gene_variant 1.0
rrs 1471922 n.78delT non_coding_transcript_exon_variant 0.38
rrs 1471925 n.80T>C non_coding_transcript_exon_variant 0.38
rrs 1471931 n.87delA non_coding_transcript_exon_variant 0.38
rrs 1471934 n.89A>G non_coding_transcript_exon_variant 0.38
rrs 1471986 n.141C>T non_coding_transcript_exon_variant 0.62
rrs 1472019 n.174G>A non_coding_transcript_exon_variant 0.52
rrs 1472023 n.178G>T non_coding_transcript_exon_variant 0.45
rrs 1472031 n.186G>C non_coding_transcript_exon_variant 0.41
rrs 1472033 n.188A>C non_coding_transcript_exon_variant 0.41
rrs 1472035 n.190G>T non_coding_transcript_exon_variant 0.41
rrs 1472040 n.195T>G non_coding_transcript_exon_variant 0.41
rrs 1472041 n.196C>T non_coding_transcript_exon_variant 0.41
rrs 1472042 n.197T>G non_coding_transcript_exon_variant 0.41
rrs 1472053 n.211_212delGC non_coding_transcript_exon_variant 0.47
rrs 1472061 n.216A>T non_coding_transcript_exon_variant 0.47
rrs 1472075 n.230A>G non_coding_transcript_exon_variant 0.47
rrs 1472106 n.261G>A non_coding_transcript_exon_variant 0.57
rrs 1472108 n.263C>T non_coding_transcript_exon_variant 0.58
rrs 1472150 n.305T>A non_coding_transcript_exon_variant 0.74
rrs 1472251 n.406G>A non_coding_transcript_exon_variant 0.38
rrs 1472286 n.441C>A non_coding_transcript_exon_variant 0.19
rrs 1472324 n.479G>C non_coding_transcript_exon_variant 0.17
rrs 1472325 n.480G>C non_coding_transcript_exon_variant 0.17
rrs 1472327 n.482G>A non_coding_transcript_exon_variant 0.18
rrs 1472328 n.483G>T non_coding_transcript_exon_variant 0.18
rrs 1472337 n.492C>G non_coding_transcript_exon_variant 0.38
rrs 1472380 n.535G>C non_coding_transcript_exon_variant 0.61
rrs 1472446 n.601T>A non_coding_transcript_exon_variant 0.71
rrs 1472452 n.607G>A non_coding_transcript_exon_variant 0.69
rrs 1472464 n.619A>G non_coding_transcript_exon_variant 0.71
rrs 1472846 n.1001C>A non_coding_transcript_exon_variant 0.55
rrs 1472847 n.1002G>C non_coding_transcript_exon_variant 0.55
rrs 1472849 n.1004C>G non_coding_transcript_exon_variant 0.53
rrs 1472850 n.1005T>C non_coding_transcript_exon_variant 0.53
rrs 1472857 n.1012A>G non_coding_transcript_exon_variant 0.55
rrs 1472858 n.1013G>T non_coding_transcript_exon_variant 0.52
rrs 1472860 n.1015C>G non_coding_transcript_exon_variant 0.52
rrs 1472861 n.1016G>T non_coding_transcript_exon_variant 0.52
rrs 1472973 n.1128A>T non_coding_transcript_exon_variant 0.62
rrs 1473104 n.1259C>T non_coding_transcript_exon_variant 0.57
rrs 1473110 n.1265T>G non_coding_transcript_exon_variant 0.55
rrs 1473111 n.1266A>G non_coding_transcript_exon_variant 0.55
rrs 1473276 n.1431A>G non_coding_transcript_exon_variant 0.6
rrs 1473290 n.1445C>T non_coding_transcript_exon_variant 0.59
rrs 1473291 n.1446_1447insT non_coding_transcript_exon_variant 0.53
rrs 1473301 n.1456T>C non_coding_transcript_exon_variant 0.54
rrl 1473397 n.-261A>T upstream_gene_variant 0.13
rrl 1473697 n.40C>T non_coding_transcript_exon_variant 0.14
rrl 1473717 n.60G>T non_coding_transcript_exon_variant 0.19
rrl 1473746 n.89T>C non_coding_transcript_exon_variant 0.19
rrl 1473758 n.101G>T non_coding_transcript_exon_variant 0.27
rrl 1473770 n.113T>G non_coding_transcript_exon_variant 0.33
rrl 1473788 n.131A>G non_coding_transcript_exon_variant 0.28
rrl 1473806 n.149C>T non_coding_transcript_exon_variant 0.17
rrl 1473823 n.166T>C non_coding_transcript_exon_variant 0.16
rrl 1473829 n.172G>T non_coding_transcript_exon_variant 0.17
rrl 1473830 n.173T>G non_coding_transcript_exon_variant 0.17
rrl 1473831 n.174G>T non_coding_transcript_exon_variant 0.16
rrl 1473832 n.175C>A non_coding_transcript_exon_variant 0.17
rrl 1473876 n.219G>A non_coding_transcript_exon_variant 0.18
rrl 1473899 n.242A>G non_coding_transcript_exon_variant 0.12
rrl 1474083 n.426C>T non_coding_transcript_exon_variant 0.18
rrl 1474091 n.434C>T non_coding_transcript_exon_variant 0.17
rrl 1474093 n.436G>A non_coding_transcript_exon_variant 0.17
rrl 1474096 n.439C>T non_coding_transcript_exon_variant 0.17
rrl 1474110 n.453_454insCGGTG non_coding_transcript_exon_variant 0.17
rrl 1474135 n.478G>A non_coding_transcript_exon_variant 0.39
rrl 1474140 n.483C>T non_coding_transcript_exon_variant 0.39
rrl 1474151 n.494C>T non_coding_transcript_exon_variant 0.39
rrl 1474174 n.517A>G non_coding_transcript_exon_variant 0.44
rrl 1474181 n.524C>T non_coding_transcript_exon_variant 0.4
rrl 1474183 n.526T>C non_coding_transcript_exon_variant 0.4
rrl 1474185 n.528G>A non_coding_transcript_exon_variant 0.43
rrl 1474186 n.529A>G non_coding_transcript_exon_variant 0.43
rrl 1474249 n.592G>T non_coding_transcript_exon_variant 0.5
rrl 1474266 n.609T>C non_coding_transcript_exon_variant 0.39
rrl 1474269 n.612C>T non_coding_transcript_exon_variant 0.37
rrl 1474292 n.635T>G non_coding_transcript_exon_variant 0.3
rrl 1474294 n.638_649delCTCTCCGGAGGA non_coding_transcript_exon_variant 0.32
rrl 1474308 n.651G>T non_coding_transcript_exon_variant 0.29
rrl 1474310 n.653T>G non_coding_transcript_exon_variant 0.3
rrl 1474362 n.705A>G non_coding_transcript_exon_variant 0.33
rrl 1474417 n.762_765delACGC non_coding_transcript_exon_variant 0.33
rrl 1474432 n.775C>T non_coding_transcript_exon_variant 0.33
rrl 1474439 n.782A>G non_coding_transcript_exon_variant 0.31
rrl 1474446 n.789C>T non_coding_transcript_exon_variant 0.3
rrl 1474626 n.969T>C non_coding_transcript_exon_variant 0.22
rrl 1474627 n.970G>A non_coding_transcript_exon_variant 0.22
rrl 1474629 n.972G>A non_coding_transcript_exon_variant 0.22
rrl 1474632 n.975G>T non_coding_transcript_exon_variant 0.23
rrl 1474636 n.979A>T non_coding_transcript_exon_variant 0.23
rrl 1474637 n.980C>T non_coding_transcript_exon_variant 0.23
rrl 1474638 n.981C>G non_coding_transcript_exon_variant 0.24
rrl 1474639 n.982G>T non_coding_transcript_exon_variant 0.24
rrl 1474640 n.983C>T non_coding_transcript_exon_variant 0.24
rrl 1474673 n.1016T>C non_coding_transcript_exon_variant 0.39
rrl 1474676 n.1019T>A non_coding_transcript_exon_variant 0.36
rrl 1474677 n.1020A>G non_coding_transcript_exon_variant 0.38
rrl 1474710 n.1053T>A non_coding_transcript_exon_variant 0.4
rrl 1474711 n.1054G>C non_coding_transcript_exon_variant 0.42
rrl 1474712 n.1055G>A non_coding_transcript_exon_variant 0.4
rrl 1474713 n.1056T>A non_coding_transcript_exon_variant 0.42
rrl 1474753 n.1096A>G non_coding_transcript_exon_variant 0.5
rrl 1474760 n.1103A>G non_coding_transcript_exon_variant 0.54
rrl 1474794 n.1137C>T non_coding_transcript_exon_variant 0.62
rrl 1474803 n.1146G>A non_coding_transcript_exon_variant 0.62
rrl 1474812 n.1155G>A non_coding_transcript_exon_variant 0.56
rrl 1474830 n.1173A>G non_coding_transcript_exon_variant 0.56
rrl 1474932 n.1275C>T non_coding_transcript_exon_variant 0.37
rrl 1475061 n.1404C>A non_coding_transcript_exon_variant 0.33
rrl 1475062 n.1405A>T non_coding_transcript_exon_variant 0.33
rrl 1475120 n.1463G>T non_coding_transcript_exon_variant 0.5
rrl 1475315 n.1658A>T non_coding_transcript_exon_variant 0.15
rrl 1475353 n.1696A>T non_coding_transcript_exon_variant 0.21
rrl 1475354 n.1697A>G non_coding_transcript_exon_variant 0.21
rrl 1475355 n.1698C>T non_coding_transcript_exon_variant 0.21
rrl 1475363 n.1706C>T non_coding_transcript_exon_variant 0.23
rrl 1475369 n.1712G>T non_coding_transcript_exon_variant 0.2
rrl 1475379 n.1722G>A non_coding_transcript_exon_variant 0.2
rrl 1475380 n.1723C>A non_coding_transcript_exon_variant 0.21
rrl 1475381 n.1724G>C non_coding_transcript_exon_variant 0.21
rrl 1475382 n.1725A>G non_coding_transcript_exon_variant 0.21
rrl 1475395 n.1738T>C non_coding_transcript_exon_variant 0.27
rrl 1475396 n.1739C>G non_coding_transcript_exon_variant 0.27
rrl 1475397 n.1740G>T non_coding_transcript_exon_variant 0.27
rrl 1475398 n.1741C>T non_coding_transcript_exon_variant 0.27
rrl 1475403 n.1746T>A non_coding_transcript_exon_variant 0.27
rrl 1475404 n.1747A>T non_coding_transcript_exon_variant 0.27
rrl 1475419 n.1762C>T non_coding_transcript_exon_variant 0.47
rrl 1475429 n.1772G>T non_coding_transcript_exon_variant 0.54
rrl 1475452 n.1795C>A non_coding_transcript_exon_variant 0.55
rrl 1475479 n.1822C>G non_coding_transcript_exon_variant 0.54
rrl 1475483 n.1826C>T non_coding_transcript_exon_variant 0.54
rrl 1475505 n.1848G>A non_coding_transcript_exon_variant 0.47
rrl 1475526 n.1869C>A non_coding_transcript_exon_variant 0.44
rrl 1475531 n.1874C>T non_coding_transcript_exon_variant 0.44
rrl 1475544 n.1887A>T non_coding_transcript_exon_variant 0.41
rrl 1475545 n.1888T>G non_coding_transcript_exon_variant 0.41
rrl 1475602 n.1945G>C non_coding_transcript_exon_variant 0.15
rrl 1475629 n.1972G>C non_coding_transcript_exon_variant 0.17
rrl 1475659 n.2002G>A non_coding_transcript_exon_variant 0.16
rrl 1475753 n.2096C>T non_coding_transcript_exon_variant 0.28
rrl 1475762 n.2105G>T non_coding_transcript_exon_variant 0.29
rrl 1475763 n.2106C>T non_coding_transcript_exon_variant 0.29
rrl 1475764 n.2107A>C non_coding_transcript_exon_variant 0.29
rrl 1475765 n.2108A>G non_coding_transcript_exon_variant 0.29
rrl 1475775 n.2118G>A non_coding_transcript_exon_variant 0.37
rrl 1475988 n.2331A>G non_coding_transcript_exon_variant 0.5
rrl 1475991 n.2334T>C non_coding_transcript_exon_variant 0.52
rrl 1475995 n.2338G>A non_coding_transcript_exon_variant 0.48
rrl 1476030 n.2373A>G non_coding_transcript_exon_variant 0.38
rrl 1476032 n.2375C>A non_coding_transcript_exon_variant 0.38
rrl 1476033 n.2376T>G non_coding_transcript_exon_variant 0.38
rrl 1476035 n.2378G>C non_coding_transcript_exon_variant 0.38
rrl 1476044 n.2387T>G non_coding_transcript_exon_variant 0.4
rrl 1476046 n.2389G>T non_coding_transcript_exon_variant 0.42
rrl 1476047 n.2390G>T non_coding_transcript_exon_variant 0.42
rrl 1476049 n.2392C>T non_coding_transcript_exon_variant 0.44
rrl 1476088 n.2431A>C non_coding_transcript_exon_variant 0.52
rrl 1476099 n.2442A>G non_coding_transcript_exon_variant 0.5
rrl 1476103 n.2446C>G non_coding_transcript_exon_variant 0.52
rrl 1476105 n.2448G>A non_coding_transcript_exon_variant 0.5
rrl 1476106 n.2449A>T non_coding_transcript_exon_variant 0.48
rrl 1476110 n.2453G>C non_coding_transcript_exon_variant 0.48
rrl 1476115 n.2458T>C non_coding_transcript_exon_variant 0.5
rrl 1476131 n.2474C>T non_coding_transcript_exon_variant 0.55
rrl 1476160 n.2503T>C non_coding_transcript_exon_variant 0.58
rrl 1476214 n.2557G>T non_coding_transcript_exon_variant 0.64
rrl 1476215 n.2558C>T non_coding_transcript_exon_variant 0.64
rrl 1476224 n.2567A>G non_coding_transcript_exon_variant 0.66
rrl 1476251 n.2594T>G non_coding_transcript_exon_variant 0.63
rrl 1476256 n.2599A>T non_coding_transcript_exon_variant 0.66
rrl 1476260 n.2603A>G non_coding_transcript_exon_variant 0.66
rrl 1476281 n.2624T>C non_coding_transcript_exon_variant 0.65
rrl 1476297 n.2640C>T non_coding_transcript_exon_variant 0.64
rrl 1476299 n.2642C>T non_coding_transcript_exon_variant 0.63
rrl 1476529 n.2872A>G non_coding_transcript_exon_variant 0.78
rrl 1476540 n.2883C>T non_coding_transcript_exon_variant 0.77
rrl 1476583 n.2926G>A non_coding_transcript_exon_variant 0.7
rrl 1476584 n.2927C>T non_coding_transcript_exon_variant 0.69
rrl 1476594 n.2937C>T non_coding_transcript_exon_variant 0.68
rrl 1476597 n.2940G>A non_coding_transcript_exon_variant 0.7
rrl 1476603 n.2946G>A non_coding_transcript_exon_variant 0.7
rrl 1476628 n.2971T>A non_coding_transcript_exon_variant 0.55
rrl 1476664 n.3007T>C non_coding_transcript_exon_variant 0.4
rrl 1476665 n.3008T>C non_coding_transcript_exon_variant 0.4
rrl 1476674 n.3017T>C non_coding_transcript_exon_variant 0.4
rrl 1476679 n.3022T>C non_coding_transcript_exon_variant 0.38
rrl 1476689 n.3032A>T non_coding_transcript_exon_variant 0.33
rrl 1476690 n.3033C>T non_coding_transcript_exon_variant 0.33
rrl 1476693 n.3036G>A non_coding_transcript_exon_variant 0.33
rrl 1476695 n.3038T>A non_coding_transcript_exon_variant 0.33
rrl 1476716 n.3059A>C non_coding_transcript_exon_variant 0.17
rrl 1476723 n.3066T>A non_coding_transcript_exon_variant 0.18
inhA 1673703 c.-499C>T upstream_gene_variant 0.19
fabG1 1673708 c.270_271delCC frameshift_variant 0.19
fabG1 1673714 c.275_276insT frameshift_variant 0.19
fabG1 1673717 c.278_279insA frameshift_variant 0.2
inhA 1673724 c.-478A>G upstream_gene_variant 0.2
inhA 1673730 c.-472C>G upstream_gene_variant 0.2
inhA 1673745 c.-457G>A upstream_gene_variant 0.23
inhA 1673748 c.-454A>G upstream_gene_variant 0.21
fabG1 1673749 p.Lys104Arg missense_variant 0.21
fabG1 1673760 p.Lys107Asn missense_variant 0.18
inhA 1673778 c.-424C>G upstream_gene_variant 0.17
inhA 1673784 c.-418G>T upstream_gene_variant 0.15
inhA 1673799 c.-403T>C upstream_gene_variant 0.16
inhA 1673802 c.-400A>G upstream_gene_variant 0.16
inhA 1673808 c.-394A>G upstream_gene_variant 0.2
fabG1 1673905 p.Ser156Ala missense_variant 0.19
inhA 1673916 c.-286A>C upstream_gene_variant 0.18
fabG1 1673917 p.Val160Leu missense_variant 0.19
inhA 1673922 c.-280T>C upstream_gene_variant 0.19
inhA 1673931 c.-271C>G upstream_gene_variant 0.19
fabG1 1673941 p.Ala168Ser missense_variant 0.14
inhA 1673952 c.-250G>T upstream_gene_variant 0.15
fabG1 1673962 p.Asn175Gly missense_variant 0.15
inhA 1673976 c.-226T>C upstream_gene_variant 0.15
fabG1 1674006 p.Asp189Glu missense_variant 0.15
inhA 1674024 c.-178T>C upstream_gene_variant 0.21
inhA 1674054 c.-148T>C upstream_gene_variant 0.13
inhA 1674060 c.-142A>C upstream_gene_variant 0.13
fabG1 1674079 p.Pro214Ala missense_variant 0.15
fabG1 1674083 p.Ala215Glu missense_variant 0.15
inhA 1674096 c.-106G>C upstream_gene_variant 0.15
fabG1 1674098 p.Val220Ala missense_variant 0.15
inhA 1674718 c.517A>C synonymous_variant 0.16
inhA 1674729 c.528G>T synonymous_variant 0.17
inhA 1674742 p.Lys181Glu missense_variant 0.15
rpsA 1833628 c.87G>C synonymous_variant 0.17
rpsA 1833634 c.93G>A synonymous_variant 0.17
rpsA 1833661 c.120A>G synonymous_variant 0.29
rpsA 1833664 c.123C>A synonymous_variant 0.28
rpsA 1833676 c.135A>G synonymous_variant 0.32
rpsA 1833679 c.138G>T synonymous_variant 0.32
rpsA 1833685 c.144G>T synonymous_variant 0.34
rpsA 1833694 c.153G>C synonymous_variant 0.34
rpsA 1833697 c.156C>G synonymous_variant 0.36
rpsA 1833703 c.162C>T synonymous_variant 0.38
rpsA 1833709 c.168C>T synonymous_variant 0.38
rpsA 1833724 c.183C>T synonymous_variant 0.37
rpsA 1833727 c.186G>C synonymous_variant 0.36
rpsA 1833730 c.189C>T synonymous_variant 0.36
rpsA 1833733 c.192C>T synonymous_variant 0.36
rpsA 1833734 p.Ala65Ser missense_variant 0.34
rpsA 1833745 c.204G>C synonymous_variant 0.39
rpsA 1833760 c.219C>T synonymous_variant 0.33
rpsA 1833787 c.246C>G synonymous_variant 0.46
rpsA 1833790 c.249T>C synonymous_variant 0.44
rpsA 1833793 c.252C>T synonymous_variant 0.44
rpsA 1833802 c.261A>G synonymous_variant 0.43
rpsA 1833808 c.267G>C synonymous_variant 0.39
rpsA 1833811 c.270G>T synonymous_variant 0.41
rpsA 1833829 c.288A>G synonymous_variant 0.36
rpsA 1833832 c.291G>A synonymous_variant 0.36
rpsA 1833838 c.297G>C synonymous_variant 0.32
rpsA 1833841 c.300C>G synonymous_variant 0.28
rpsA 1833847 c.306C>G synonymous_variant 0.26
rpsA 1833856 c.315A>G synonymous_variant 0.26
rpsA 1833862 c.321G>T synonymous_variant 0.27
rpsA 1833894 p.Ala118Glu missense_variant 0.26
rpsA 1833904 c.363G>A synonymous_variant 0.26
rpsA 1833928 c.387G>C synonymous_variant 0.21
rpsA 1833949 c.408T>C synonymous_variant 0.29
rpsA 1833970 c.429G>T synonymous_variant 0.31
rpsA 1833976 c.435C>T synonymous_variant 0.34
rpsA 1833979 c.438T>C synonymous_variant 0.33
rpsA 1833991 c.450C>A synonymous_variant 0.4
rpsA 1834000 c.459G>C synonymous_variant 0.41
rpsA 1834009 c.468C>T synonymous_variant 0.42
rpsA 1834012 c.471G>T synonymous_variant 0.44
rpsA 1834015 c.474G>C synonymous_variant 0.41
rpsA 1834021 c.480C>T synonymous_variant 0.42
rpsA 1834030 c.489C>G synonymous_variant 0.43
rpsA 1834097 c.556_557delTCinsAG synonymous_variant 0.29
rpsA 1834102 c.561T>C synonymous_variant 0.29
rpsA 1834150 c.609G>C synonymous_variant 0.32
rpsA 1834153 c.612T>C synonymous_variant 0.3
rpsA 1834154 p.Asn205Gln missense_variant 0.3
rpsA 1834157 c.616T>C synonymous_variant 0.3
rpsA 1834162 c.621A>G synonymous_variant 0.32
rpsA 1834165 c.624A>G synonymous_variant 0.33
rpsA 1834168 c.627C>T synonymous_variant 0.32
rpsA 1834169 p.Thr210Ala missense_variant 0.29
rpsA 1834177 c.636A>C synonymous_variant 1.0
rpsA 1834189 c.648G>C synonymous_variant 0.35
rpsA 1834213 c.672G>C synonymous_variant 0.34
rpsA 1834234 c.693G>C synonymous_variant 0.28
rpsA 1834240 c.699T>C synonymous_variant 0.28
rpsA 1834246 c.705G>C synonymous_variant 0.27
rpsA 1834249 c.708T>C synonymous_variant 0.27
rpsA 1834252 c.711C>G synonymous_variant 0.26
rpsA 1834261 c.720A>G synonymous_variant 0.24
rpsA 1834264 c.723G>C synonymous_variant 0.23
rpsA 1834279 c.738C>T synonymous_variant 0.17
rpsA 1834297 c.756C>T synonymous_variant 0.24
rpsA 1834303 c.762T>G synonymous_variant 0.26
rpsA 1834306 c.765T>C synonymous_variant 0.25
rpsA 1834345 c.804C>T synonymous_variant 0.26
rpsA 1834348 c.807T>C synonymous_variant 0.26
rpsA 1834361 c.820T>C synonymous_variant 0.22
rpsA 1834366 c.825A>G synonymous_variant 0.21
rpsA 1834396 c.855G>C synonymous_variant 0.3
rpsA 1834411 c.870T>C synonymous_variant 0.29
rpsA 1834423 c.882G>T synonymous_variant 0.31
rpsA 1834451 c.910T>C synonymous_variant 0.24
rpsA 1834456 c.915T>G synonymous_variant 0.22
rpsA 1834468 c.927A>G synonymous_variant 0.28
rpsA 1834489 c.948T>C synonymous_variant 0.32
rpsA 1834498 c.957C>T synonymous_variant 0.32
rpsA 1834513 c.972C>G synonymous_variant 0.3
rpsA 1834520 p.Ala327Ser missense_variant 0.3
rpsA 1834528 c.987T>C synonymous_variant 0.25
rpsA 1834540 c.999G>C synonymous_variant 0.25
rpsA 1834543 c.1002C>G synonymous_variant 0.22
rpsA 1834546 c.1005T>C synonymous_variant 0.24
rpsA 1834554 c.1014_1015delTG frameshift_variant 0.23
rpsA 1834558 c.1017_1018insAG frameshift_variant 0.23
rpsA 1834606 c.1065C>T synonymous_variant 0.29
rpsA 1834609 c.1068T>C synonymous_variant 0.29
rpsA 1834619 c.1078T>C synonymous_variant 0.25
rpsA 1834622 c.1081_1083delTCGinsAGC synonymous_variant 0.22
rpsA 1834633 c.1092A>G synonymous_variant 0.26
rpsA 1834639 c.1098T>C synonymous_variant 0.27
rpsA 1834663 c.1122C>T synonymous_variant 0.21
rpsA 1834666 c.1125G>C synonymous_variant 0.23
rpsA 1834667 p.Ala376Ser missense_variant 0.24
rpsA 1834690 c.1149T>C synonymous_variant 0.29
rpsA 1834732 c.1191T>C synonymous_variant 0.25
rpsA 1834738 c.1197A>G synonymous_variant 0.22
rpsA 1834753 c.1212T>C synonymous_variant 0.2
rpsA 1834756 c.1215G>A synonymous_variant 0.19
rpsA 1834759 c.1218A>C synonymous_variant 0.19
rpsA 1834765 p.Glu408Asp missense_variant 0.2
rpsA 1834771 c.1230G>A synonymous_variant 0.15
rpsA 1834774 c.1233C>G synonymous_variant 0.15
rpsA 1834776 p.Ala412Glu missense_variant 0.15
rpsA 1834786 c.1245A>G synonymous_variant 0.15
rpsA 1834789 c.1248T>C synonymous_variant 0.15
rpsA 1834792 c.1251G>C synonymous_variant 0.16
tlyA 1917972 c.33A>G synonymous_variant 1.0
katG 2154724 p.Arg463Leu missense_variant 1.0
katG 2155680 c.432G>A synonymous_variant 0.25
katG 2155691 c.421T>C synonymous_variant 0.22
katG 2155696 p.Ala139Val missense_variant 0.28
katG 2155716 c.396T>G synonymous_variant 0.26
katG 2155722 c.390G>C synonymous_variant 0.24
katG 2155728 c.384G>C synonymous_variant 0.23
katG 2155742 p.Gly124Arg missense_variant 0.22
katG 2155747 p.Ala122Gly missense_variant 0.22
katG 2155749 c.363C>T synonymous_variant 0.22
katG 2155752 c.360C>T synonymous_variant 0.21
katG 2155764 p.His116Glu missense_variant 0.22
katG 2155769 p.Ile115Val missense_variant 0.22
katG 2155770 c.342C>G synonymous_variant 0.22
katG 2155782 c.330C>A synonymous_variant 0.21
katG 2155794 p.Ala106Ser missense_variant 0.18
katG 2155800 c.312G>C synonymous_variant 0.19
katG 2155805 p.Ile103Val missense_variant 0.19
katG 2155806 c.306T>C synonymous_variant 0.19
katG 2155815 c.297G>C synonymous_variant 0.19
katG 2155824 c.288C>G synonymous_variant 0.19
PPE35 2167926 p.Leu896Ser missense_variant 1.0
Rv1979c 2223293 c.-129A>G upstream_gene_variant 1.0
pncA 2288814 p.Ala143Val missense_variant 0.33
kasA 2518747 c.633C>G synonymous_variant 0.18
kasA 2518756 c.642G>C synonymous_variant 0.22
kasA 2518780 p.Glu222Asp missense_variant 0.2
kasA 2518783 c.669T>C synonymous_variant 0.21
kasA 2518785 p.Glu224Ala missense_variant 0.21
kasA 2518787 p.Arg225Gly missense_variant 0.21
kasA 2518792 c.678C>G synonymous_variant 0.21
kasA 2518795 c.681C>T synonymous_variant 0.21
kasA 2518813 c.699C>T synonymous_variant 0.26
kasA 2518816 c.702C>T synonymous_variant 0.26
kasA 2518825 c.711T>C synonymous_variant 0.23
kasA 2518843 c.729T>C synonymous_variant 0.26
kasA 2518847 p.Leu245Met missense_variant 0.26
kasA 2518853 p.Leu247Ile missense_variant 0.21
kasA 2518864 c.750G>C synonymous_variant 0.25
kasA 2518877 p.Lys255Leu missense_variant 0.17
eis 2714846 p.Val163Ile missense_variant 1.0
pepQ 2859753 p.Phe222Leu missense_variant 0.14
pepQ 2860451 c.-33G>T upstream_gene_variant 0.13
Rv2752c 3065997 c.195C>G synonymous_variant 0.17
Rv2752c 3066002 p.Met64Leu missense_variant 0.18
Rv2752c 3066018 c.174T>C synonymous_variant 0.23
Rv2752c 3066024 c.168T>C synonymous_variant 0.21
ald 3086788 c.-32T>C upstream_gene_variant 1.0
fprA 3473996 c.-11_-10insA upstream_gene_variant 1.0
Rv3236c 3612813 p.Thr102Ala missense_variant 1.0
rpoA 3877571 p.Pro313Ala missense_variant 0.17
rpoA 3877587 c.921A>G synonymous_variant 0.18
rpoA 3877590 c.918G>C synonymous_variant 0.18
rpoA 3877593 c.915C>T synonymous_variant 0.19
rpoA 3877638 c.870T>C synonymous_variant 0.28
rpoA 3877647 c.861C>T synonymous_variant 0.3
rpoA 3877656 c.852T>G synonymous_variant 0.27
rpoA 3877668 c.840A>G synonymous_variant 0.31
rpoA 3877671 c.837C>G synonymous_variant 0.29
rpoA 3877677 c.831G>C synonymous_variant 0.27
rpoA 3877680 c.828G>C synonymous_variant 0.26
rpoA 3877683 c.825G>C synonymous_variant 0.25
rpoA 3877686 c.822A>G synonymous_variant 0.24
rpoA 3877695 c.813C>G synonymous_variant 0.23
rpoA 3877704 c.804G>T synonymous_variant 0.2
rpoA 3877728 c.780C>G synonymous_variant 0.24
rpoA 3877731 c.777G>T synonymous_variant 0.24
rpoA 3877734 c.774G>C synonymous_variant 0.25
rpoA 3877737 c.771G>C synonymous_variant 0.26
rpoA 3877743 c.765T>C synonymous_variant 0.23
rpoA 3877749 c.759C>T synonymous_variant 0.23
rpoA 3877764 c.744C>G synonymous_variant 0.19
rpoA 3877818 c.690A>G synonymous_variant 0.21
rpoA 3877848 c.660C>T synonymous_variant 0.31
rpoA 3877856 c.652T>C synonymous_variant 0.28
rpoA 3877857 c.651G>A synonymous_variant 0.29
rpoA 3877866 c.642G>C synonymous_variant 0.23
rpoA 3877875 c.633T>A synonymous_variant 0.23
rpoA 3877878 c.630G>C synonymous_variant 0.21
rpoA 3877887 c.621G>C synonymous_variant 0.22
rpoA 3877893 c.615C>T synonymous_variant 0.19
rpoA 3877905 c.603A>G synonymous_variant 0.21
rpoA 3877908 c.600T>C synonymous_variant 0.18
rpoA 3877920 c.588G>C synonymous_variant 0.18
rpoA 3877923 c.585C>T synonymous_variant 0.19
rpoA 3877926 c.582G>C synonymous_variant 0.2
rpoA 3877962 c.546G>T synonymous_variant 0.26
rpoA 3877971 p.Asp179Glu missense_variant 0.26
rpoA 3877986 c.522G>C synonymous_variant 0.22
rpoA 3877989 c.519A>G synonymous_variant 0.26
rpoA 3877995 c.513G>C synonymous_variant 0.27
rpoA 3878001 c.507A>G synonymous_variant 0.29
rpoA 3878019 c.489A>G synonymous_variant 0.35
rpoA 3878022 c.486T>C synonymous_variant 0.33
rpoA 3878025 c.483C>T synonymous_variant 0.35
rpoA 3878028 c.480G>C synonymous_variant 0.37
rpoA 3878031 c.477T>C synonymous_variant 0.37
rpoA 3878034 c.474A>G synonymous_variant 0.37
rpoA 3878040 c.468T>C synonymous_variant 0.39
rpoA 3878046 c.462T>G synonymous_variant 0.39
rpoA 3878050 p.Arg153Lys missense_variant 0.37
rpoA 3878055 c.453A>G synonymous_variant 0.44
rpoA 3878061 c.447G>A synonymous_variant 0.47
rpoA 3878070 c.438T>C synonymous_variant 0.4
rpoA 3878082 c.426T>C synonymous_variant 0.33
rpoA 3878103 c.405A>G synonymous_variant 0.29
rpoA 3878118 c.390T>C synonymous_variant 0.31
rpoA 3878127 c.381G>C synonymous_variant 0.3
rpoA 3878143 p.Gly122Asp missense_variant 0.33
rpoA 3878145 c.363C>G synonymous_variant 0.33
rpoA 3878160 c.348C>G synonymous_variant 0.36
rpoA 3878163 c.345C>T synonymous_variant 0.36
rpoA 3878187 c.321C>A synonymous_variant 0.41
rpoA 3878193 c.315T>C synonymous_variant 0.41
rpoA 3878197 p.Glu104Ala missense_variant 0.43
rpoA 3878205 c.303T>C synonymous_variant 0.48
rpoA 3878217 c.291A>G synonymous_variant 0.54
rpoA 3878238 c.270C>T synonymous_variant 0.58
rpoA 3878244 c.264G>A synonymous_variant 0.58
rpoA 3878247 c.261G>C synonymous_variant 0.59
rpoA 3878256 c.252G>C synonymous_variant 0.62
rpoA 3878264 p.Ser82Gly missense_variant 0.65
rpoA 3878271 c.237T>C synonymous_variant 0.63
rpoA 3878283 p.Glu75Asp missense_variant 0.57
rpoA 3878292 c.216T>C synonymous_variant 0.5
rpoA 3878298 c.210A>G synonymous_variant 0.42
rpoA 3878301 c.207C>G synonymous_variant 0.37
rpoA 3878304 c.204G>A synonymous_variant 0.37
rpoA 3878310 c.198G>C synonymous_variant 0.38
rpoA 3878313 c.195G>C synonymous_variant 0.38
rpoA 3878322 c.186A>G synonymous_variant 0.32
rpoA 3878331 c.177A>G synonymous_variant 0.28
rpoA 3878337 c.171T>C synonymous_variant 0.26
rpoA 3878346 c.162T>C synonymous_variant 0.18
rpoA 3878352 c.156C>G synonymous_variant 0.12
clpC1 4038383 c.2322G>C synonymous_variant 0.12
clpC1 4038398 c.2307G>T synonymous_variant 0.12
clpC1 4038519 p.Arg729Gln missense_variant 0.17
clpC1 4038551 c.2154C>G synonymous_variant 0.16
clpC1 4038563 c.2142C>T synonymous_variant 0.21
clpC1 4038584 c.2121G>A synonymous_variant 0.22
clpC1 4038587 c.2118C>G synonymous_variant 0.22
clpC1 4038596 c.2109A>G synonymous_variant 0.23
clpC1 4038602 c.2103G>C synonymous_variant 0.26
clpC1 4038623 c.2082A>G synonymous_variant 0.25
clpC1 4038640 p.Asp689Asn missense_variant 0.26
clpC1 4038647 c.2058T>G synonymous_variant 0.26
clpC1 4038658 p.Lys683Gln missense_variant 0.19
clpC1 4038660 c.2044_2045delTCinsAG synonymous_variant 0.19
clpC1 4038662 c.2043T>C synonymous_variant 0.19
clpC1 4038671 c.2034T>G synonymous_variant 0.22
clpC1 4038679 p.Pro676Ala missense_variant 0.24
clpC1 4038683 c.2022T>C synonymous_variant 0.25
clpC1 4038695 c.2010C>G synonymous_variant 0.36
clpC1 4038704 c.2001T>C synonymous_variant 0.42
clpC1 4038710 c.1995G>C synonymous_variant 0.4
clpC1 4038713 c.1992T>C synonymous_variant 0.5
clpC1 4038725 c.1980C>G synonymous_variant 0.45
clpC1 4038740 c.1965G>C synonymous_variant 0.5
clpC1 4038755 c.1950G>C synonymous_variant 0.45
clpC1 4038767 c.1938G>T synonymous_variant 0.38
clpC1 4038770 c.1935C>T synonymous_variant 0.36
clpC1 4038773 c.1932T>C synonymous_variant 0.36
clpC1 4038776 c.1929G>A synonymous_variant 0.36
clpC1 4038779 c.1926C>G synonymous_variant 0.36
clpC1 4038782 c.1923G>C synonymous_variant 0.33
clpC1 4038790 c.1915C>T synonymous_variant 0.31
clpC1 4038812 c.1893T>C synonymous_variant 0.33
clpC1 4038815 c.1890G>C synonymous_variant 0.38
clpC1 4038842 c.1863G>C synonymous_variant 0.31
clpC1 4038860 c.1845G>C synonymous_variant 0.33
clpC1 4038878 c.1827A>G synonymous_variant 0.3
clpC1 4038890 c.1815G>A synonymous_variant 0.26
clpC1 4038905 c.1800A>G synonymous_variant 0.29
clpC1 4038908 c.1797C>G synonymous_variant 0.27
clpC1 4038911 c.1794G>T synonymous_variant 0.27
clpC1 4038914 c.1791G>C synonymous_variant 0.26
clpC1 4038917 c.1788C>T synonymous_variant 0.26
clpC1 4038923 c.1782A>G synonymous_variant 0.26
clpC1 4038941 c.1764G>C synonymous_variant 0.23
clpC1 4038953 c.1752A>G synonymous_variant 0.25
clpC1 4038956 c.1749T>C synonymous_variant 0.25
clpC1 4038965 c.1740T>C synonymous_variant 0.25
clpC1 4038971 c.1734T>C synonymous_variant 0.26
clpC1 4038974 c.1731T>C synonymous_variant 0.26
clpC1 4038989 c.1716T>C synonymous_variant 0.26
clpC1 4038997 c.1708T>C synonymous_variant 0.23
clpC1 4039022 c.1683A>G synonymous_variant 0.24
clpC1 4039046 c.1659C>T synonymous_variant 0.3
clpC1 4039064 c.1641C>T synonymous_variant 0.36
clpC1 4039067 c.1638G>C synonymous_variant 0.36
clpC1 4039079 c.1626C>G synonymous_variant 0.36
clpC1 4039085 c.1620A>G synonymous_variant 0.36
clpC1 4039091 c.1614G>C synonymous_variant 0.33
clpC1 4039097 c.1608G>T synonymous_variant 0.31
clpC1 4039100 c.1605C>T synonymous_variant 0.31
clpC1 4039103 c.1602T>C synonymous_variant 0.28
clpC1 4039106 c.1599G>C synonymous_variant 0.29
clpC1 4039118 c.1587C>G synonymous_variant 0.33
clpC1 4039121 c.1584T>C synonymous_variant 0.32
clpC1 4039136 c.1569C>T synonymous_variant 0.31
clpC1 4039142 c.1563A>G synonymous_variant 0.32
clpC1 4039145 c.1560G>C synonymous_variant 0.29
clpC1 4039169 c.1536A>G synonymous_variant 0.26
clpC1 4039178 c.1527G>C synonymous_variant 0.25
clpC1 4039183 c.1522T>C synonymous_variant 0.23
clpC1 4039187 c.1518G>T synonymous_variant 0.23
clpC1 4039190 c.1515C>G synonymous_variant 0.25
clpC1 4039220 c.1485G>C synonymous_variant 0.28
clpC1 4039241 c.1464G>C synonymous_variant 0.3
clpC1 4039274 c.1431G>C synonymous_variant 0.32
clpC1 4039286 c.1419T>C synonymous_variant 0.26
clpC1 4039295 c.1410A>C synonymous_variant 0.26
clpC1 4039298 c.1407T>C synonymous_variant 0.27
clpC1 4039310 c.1395A>G synonymous_variant 0.29
clpC1 4039313 c.1392C>G synonymous_variant 0.31
clpC1 4039320 p.Ala462Gly missense_variant 0.29
clpC1 4039322 c.1383T>C synonymous_variant 0.27
clpC1 4039328 c.1377A>C synonymous_variant 0.28
clpC1 4039337 p.Thr456Gln missense_variant 0.27
clpC1 4039352 c.1353C>T synonymous_variant 0.26
clpC1 4039361 c.1344C>G synonymous_variant 0.29
clpC1 4039382 c.1323C>G synonymous_variant 0.25
clpC1 4039391 c.1314T>G synonymous_variant 0.28
clpC1 4039394 c.1311G>C synonymous_variant 0.24
clpC1 4039397 c.1308A>G synonymous_variant 0.24
clpC1 4039409 c.1296T>C synonymous_variant 0.24
clpC1 4039412 c.1293T>G synonymous_variant 0.23
clpC1 4039415 p.Glu430Asp missense_variant 0.23
clpC1 4039430 c.1275T>C synonymous_variant 0.23
clpC1 4039442 c.1263A>G synonymous_variant 0.17
clpC1 4039454 c.1251A>T synonymous_variant 0.17
clpC1 4039457 c.1248C>T synonymous_variant 0.17
clpC1 4039463 c.1242C>G synonymous_variant 0.18
clpC1 4039466 c.1239T>C synonymous_variant 0.18
clpC1 4039469 c.1236T>C synonymous_variant 0.18
clpC1 4039472 c.1233G>C synonymous_variant 0.19
clpC1 4039478 c.1227G>C synonymous_variant 0.19
clpC1 4039481 c.1224T>C synonymous_variant 0.19
clpC1 4039484 c.1221T>C synonymous_variant 0.19
clpC1 4039487 c.1218G>C synonymous_variant 0.19
clpC1 4039517 c.1188C>G synonymous_variant 0.15
clpC1 4039541 c.1164C>G synonymous_variant 0.22
clpC1 4039556 c.1149G>C synonymous_variant 0.17
clpC1 4039559 c.1146C>G synonymous_variant 0.17
clpC1 4039574 p.Ala377Gly missense_variant 0.16
clpC1 4039577 c.1128T>C synonymous_variant 0.16
clpC1 4039589 c.1116G>C synonymous_variant 0.24
clpC1 4039592 c.1113G>C synonymous_variant 0.24
clpC1 4039610 c.1095G>C synonymous_variant 0.25
clpC1 4039616 c.1089G>C synonymous_variant 0.25
clpC1 4039622 c.1083C>T synonymous_variant 0.28
clpC1 4039649 c.1056G>C synonymous_variant 0.29
clpC1 4039652 c.1053G>C synonymous_variant 0.33
clpC1 4039670 c.1035G>C synonymous_variant 0.32
clpC1 4039682 c.1023C>G synonymous_variant 0.3
clpC1 4039694 c.1011G>C synonymous_variant 0.35
clpC1 4039724 c.981A>G synonymous_variant 0.43
clpC1 4039733 c.972G>C synonymous_variant 0.42
clpC1 4039742 c.963C>T synonymous_variant 0.43
clpC1 4039748 c.957G>C synonymous_variant 0.42
clpC1 4039751 c.954A>G synonymous_variant 0.39
clpC1 4039757 c.948A>G synonymous_variant 0.39
clpC1 4039760 c.945T>C synonymous_variant 0.38
clpC1 4039769 c.936C>G synonymous_variant 0.41
clpC1 4039793 c.912C>G synonymous_variant 0.41
clpC1 4039802 c.903G>C synonymous_variant 0.4
clpC1 4039817 c.888A>T synonymous_variant 0.32
clpC1 4039823 c.882T>C synonymous_variant 0.32
clpC1 4039829 c.874_876delTTGinsCTC synonymous_variant 0.29
clpC1 4039832 c.873C>A synonymous_variant 0.27
clpC1 4039850 c.855T>C synonymous_variant 0.22
clpC1 4039865 c.840T>C synonymous_variant 0.22
clpC1 4039883 c.822G>A synonymous_variant 0.25
clpC1 4039889 c.816G>C synonymous_variant 0.23
clpC1 4039898 c.807C>G synonymous_variant 0.27
clpC1 4039904 c.801A>G synonymous_variant 0.31
clpC1 4039931 c.774T>C synonymous_variant 0.24
clpC1 4039934 c.771G>A synonymous_variant 0.2
clpC1 4039937 c.768G>C synonymous_variant 0.24
clpC1 4039946 c.759A>T synonymous_variant 0.23
clpC1 4039949 c.756G>C synonymous_variant 0.23
clpC1 4039952 c.753T>C synonymous_variant 0.23
clpC1 4039958 c.747G>C synonymous_variant 0.23
clpC1 4039991 c.714G>C synonymous_variant 0.33
clpC1 4040003 c.702G>C synonymous_variant 0.31
clpC1 4040021 c.684A>C synonymous_variant 0.32
clpC1 4040024 c.681A>G synonymous_variant 0.33
clpC1 4040033 c.672G>C synonymous_variant 0.34
clpC1 4040042 c.663C>T synonymous_variant 0.32
clpC1 4040087 c.618G>C synonymous_variant 0.25
clpC1 4040090 c.613_615delTCTinsAGC synonymous_variant 0.24
clpC1 4040093 c.612C>G synonymous_variant 0.27
clpC1 4040126 c.579C>T synonymous_variant 0.15
clpC1 4040258 c.447G>A synonymous_variant 0.21
clpC1 4040267 c.438A>G synonymous_variant 0.25
clpC1 4040277 c.427_428delTCinsAG synonymous_variant 0.27
clpC1 4040279 c.426C>G synonymous_variant 0.27
clpC1 4040306 c.399G>C synonymous_variant 0.33
clpC1 4040309 c.396C>G synonymous_variant 0.28
clpC1 4040324 c.381G>C synonymous_variant 0.32
clpC1 4040335 c.370C>T synonymous_variant 0.25
clpC1 4040336 c.369G>C synonymous_variant 0.25
clpC1 4040345 c.360C>G synonymous_variant 0.24
clpC1 4040348 c.357G>C synonymous_variant 0.29
clpC1 4040354 c.351A>G synonymous_variant 0.3
clpC1 4040357 c.348T>C synonymous_variant 0.32
clpC1 4040363 c.342A>T synonymous_variant 0.39
clpC1 4040366 c.339C>T synonymous_variant 0.37
clpC1 4040369 c.336C>G synonymous_variant 0.42
clpC1 4040375 c.330G>C synonymous_variant 0.45
clpC1 4040380 c.325T>C synonymous_variant 0.43
clpC1 4040387 c.318A>G synonymous_variant 0.44
clpC1 4040390 c.315C>G synonymous_variant 0.46
clpC1 4040411 c.294T>C synonymous_variant 0.39
clpC1 4040423 c.282A>G synonymous_variant 0.32
clpC1 4040431 c.274T>C synonymous_variant 0.3
clpC1 4040433 c.271_272delAGinsTC synonymous_variant 0.3
clpC1 4040441 c.264C>G synonymous_variant 0.3
clpC1 4040444 c.261C>G synonymous_variant 0.3
clpC1 4040450 c.255A>G synonymous_variant 0.3
clpC1 4040459 c.246C>G synonymous_variant 0.32
clpC1 4040462 c.243C>T synonymous_variant 0.3
clpC1 4040465 c.240T>C synonymous_variant 0.29
clpC1 4040468 c.237G>C synonymous_variant 0.3
clpC1 4040471 c.234T>C synonymous_variant 0.3
clpC1 4040477 c.228G>C synonymous_variant 0.32
clpC1 4040480 c.225T>C synonymous_variant 0.35
clpC1 4040495 c.210C>G synonymous_variant 0.4
clpC1 4040522 c.183T>C synonymous_variant 0.36
clpC1 4040531 c.174T>C synonymous_variant 0.32
clpC1 4040546 c.159G>C synonymous_variant 0.33
clpC1 4040561 c.144A>G synonymous_variant 0.29
clpC1 4040573 c.132T>A synonymous_variant 0.25
clpC1 4040579 c.126A>G synonymous_variant 0.25
clpC1 4040582 c.123G>C synonymous_variant 0.25
clpC1 4040585 c.120A>G synonymous_variant 0.24
clpC1 4040588 c.117T>C synonymous_variant 0.23
clpC1 4040591 c.114C>T synonymous_variant 0.23
clpC1 4040594 c.111G>T synonymous_variant 0.27
clpC1 4040597 c.108C>T synonymous_variant 0.24
clpC1 4040600 c.105A>G synonymous_variant 0.24
clpC1 4040603 c.102T>G synonymous_variant 0.24
clpC1 4040606 c.99T>C synonymous_variant 0.24
clpC1 4040618 c.87C>G synonymous_variant 0.23
panD 4044150 c.132A>G synonymous_variant 0.2
panD 4044156 c.126A>G synonymous_variant 0.2
panD 4044165 c.117G>C synonymous_variant 0.2
panD 4044177 c.105C>G synonymous_variant 0.22
panD 4044180 p.Asp34Glu missense_variant 0.22
panD 4044188 c.94T>C synonymous_variant 0.25
panD 4044189 c.93C>T synonymous_variant 0.25
panD 4044195 c.87T>C synonymous_variant 0.25
panD 4044210 c.72C>T synonymous_variant 0.22
panD 4044213 c.69C>G synonymous_variant 0.22
embA 4242643 c.-590C>T upstream_gene_variant 1.0
embA 4243460 c.228C>T synonymous_variant 1.0
embB 4246007 c.-507G>T upstream_gene_variant 0.12
embB 4247398 c.885G>A synonymous_variant 0.17
embB 4247401 c.888T>C synonymous_variant 0.2
embB 4247407 c.894G>C synonymous_variant 0.24
embB 4247426 p.Gly305Gln missense_variant 0.29
embB 4247434 c.921C>G synonymous_variant 0.31
embB 4247437 c.924A>C synonymous_variant 0.31
embB 4247440 c.927C>G synonymous_variant 0.31
embB 4247449 c.936C>T synonymous_variant 0.33
embB 4247455 c.942C>T synonymous_variant 0.33
embB 4247464 c.951C>G synonymous_variant 0.37
embB 4247470 c.957T>C synonymous_variant 0.35
embB 4247491 c.978G>C synonymous_variant 0.42
embB 4247497 c.984T>C synonymous_variant 0.41
embB 4247511 p.Tyr333Phe missense_variant 0.5
embB 4247527 c.1014G>C synonymous_variant 0.48
embB 4247536 c.1023C>A synonymous_variant 0.48
embB 4247554 c.1041T>C synonymous_variant 0.44
embB 4247555 p.Leu348Ile missense_variant 0.44
embB 4247566 c.1053C>A synonymous_variant 0.4
embB 4247572 c.1059A>C synonymous_variant 0.38
embB 4247578 c.1065_1066insATCTGT conservative_inframe_insertion 0.38
embB 4247581 c.1069_1074delGCCGGG conservative_inframe_deletion 0.38
embB 4247590 c.1077A>G synonymous_variant 0.38
embB 4247629 c.1116C>G synonymous_variant 0.17
embB 4248112 c.1599C>G synonymous_variant 0.23
embB 4248115 c.1602C>T synonymous_variant 0.77
embB 4248118 c.1605T>C synonymous_variant 0.23
embB 4248130 c.1617G>C synonymous_variant 0.25
embB 4248133 c.1620C>G synonymous_variant 0.23
embB 4248142 c.1629T>C synonymous_variant 0.23
embB 4248143 p.Leu544Ile missense_variant 0.25
embB 4248157 c.1644A>G synonymous_variant 0.25
embB 4248158 p.Cys549Ser missense_variant 0.25
embB 4248167 p.Thr552Ala missense_variant 0.21
embB 4248170 p.Ala553Ser missense_variant 0.21
embB 4248173 p.Val554Leu missense_variant 0.23
embB 4248199 c.1686A>G synonymous_variant 0.28
embB 4248200 p.Ile563Val missense_variant 0.28
embB 4248206 p.Ser565Gly missense_variant 0.28
embB 4248220 c.1707A>G synonymous_variant 0.32
embB 4248225 p.Ala571Val missense_variant 0.28
aftB 4267647 p.Asp397Gly missense_variant 1.0
whiB6 4338595 c.-75delG upstream_gene_variant 1.0
gid 4407588 c.615A>G synonymous_variant 1.0
gid 4407927 p.Glu92Asp missense_variant 1.0