Rv0668 - c.2565C>T


Drug resistance types
103 Sensitive 10 RR-TB 50 HR-TB 24 MDR-TB 4 Pre-XDR-TB 1 XDR-TB 79 Other
lineage Counts
lineage Count
lineage2.2.1 13
lineage1.2.1.1 1
lineage4.3.4.2.1 3
lineage4.9 138
lineage4.8 2
La3;lineage4.9 9
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage3.1.2.2 1
lineage3 3
La1.7;lineage4.9 1
M.canetti;lineage4.9 3
lineage4.2;lineage4.6.3;lineage4.9.1 2
lineage1.1.2 3
lineage1.1.3.2 1
lineage4.1.2.1 2
La1.7;lineage3;lineage4.9;lineage7 1
La1.7;lineage4.2 1
lineage4.6.3;lineage4.9 2
4
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
M.canetti;lineage4.6.4;lineage4.9 2
La1.8.1 2
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La1.7;lineage4.9;lineage6 1
lineage3.1.2.1;lineage3.1.2.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
lineage4.3.3 1
lineage4.3.1;lineage4.9;lineage6 1
La2;lineage4.9 1
La1.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.9;lineage9 2
La1.7;M.canetti;lineage4.9 2
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.3.2.1 1
La1;lineage4.9 2
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage4 3
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage1.1.3.1 1
lineage6.1.1 2
La1.7;lineage4.9;lineage7 3
lineage6.1.2 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
M.canetti;lineage4.2 1
lineage2.2 2
lineage2.2.1.1 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
lineage4.9;lineage7 1
lineage4.3.2;lineage4.9 1
lineage4.4.1.1.1 2
lineage4.6.2.2 2
lineage3.1;lineage9 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
La1.6;La3;M.canetti;lineage4.2.2 1
lineage4.1.2 1
La3;M.canetti;lineage4.9 1
M.canetti;lineage4.2;lineage4.9 1
lineage2.2.1;lineage4 1
lineage4.6.1.1 2
La1.2;La1.8.1 1
La1;lineage2;lineage4.9 1
lineage4.1.1.3 1
La2;lineage4.9;lineage9 1
lineage4.2.1 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
La1.7.1;La1.7.X-unk4;lineage7 1
La1;lineage4.1.2 1
lineage2.2.1;lineage4.9 1
lineage4.8;lineage4.9 2
lineage4.2;lineage4.6.3;lineage4.9 1
lineage4.9;lineage6.3 1
lineage4.9;lineage6.1.3 1
lineage4.5 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage4.3.4.2 1
spoligotype Counts
spoligotype Count
None 271
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4831616 MDR-TB lineage2.2.1 None
ERR4814734 Other lineage1.2.1.1 None
ERR176675 Sensitive lineage4.3.4.2.1 None
ERR4816964 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
ERR3283014 Sensitive La3;lineage4.9 None
SRR16156817 Other lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR29096276 Sensitive lineage4.9 None
ERR3797063 Sensitive La3;lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR4798504 RR-TB lineage3 None
SRR10315567 HR-TB lineage2.2.1 None
ERR1063846 HR-TB lineage4.9 None
ERR3797085 Other lineage4.9 None
SRR6044876 Sensitive lineage4.9 None
SRR6511621 Sensitive lineage4.9 None
SRR29096150 Other lineage4.9 None
ERR926163 Other lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR4596910 Sensitive lineage4.9 None
ERR4816466 HR-TB lineage4.9 None
ERR971389 Sensitive lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR926164 Other lineage4.9 None
SRR3675441 Other lineage4.9 None
ERR3797047 MDR-TB lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR28868888 Other lineage1.1.3.2 None
SRR6832249 Sensitive lineage2.2.1 None
SRR29050859 Other lineage4.9 None
SRR1173777 Sensitive lineage4.9 None
SRR19304078 Sensitive lineage4.1.2.1 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR23961559 Other La1.7;lineage4.2 None
SRR26331611 Sensitive lineage4.9 None
SRR1181351 Sensitive lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
SRR5341456 Other lineage4.9 None
SRR26159047 Other lineage4.6.3;lineage4.9 None
ERR987722 MDR-TB None
SRR5341387 Other lineage4.9 None
ERR3797079 Sensitive lineage4.9 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR4815471 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
SRR7236177 Other La1.8.1 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR1181325 Sensitive lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
SRR10808668 Sensitive lineage2.2.1 None
SRR1180406 Sensitive lineage4.9 None
SRR29097026 Other lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR1180300 Sensitive lineage4.9 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
SRR5535933 Other lineage4.9 None
SRR5153091 HR-TB lineage4.3.3 None
ERR4188247 HR-TB lineage4.9 None
SRR5341400 Sensitive lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR6866410 Sensitive lineage4.9 None
ERR323039 HR-TB La2;lineage4.9 None
SRR5341310 Other lineage1.1.2 None
ERR4769427 Other La1.2 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR13285068 Sensitive lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
ERR323107 Sensitive lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
ERR108125 RR-TB lineage4.9 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR4798099 Other lineage4.9 None
SRR5341425 Other lineage4.9 None
SRR3675446 RR-TB lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
ERR926160 Sensitive lineage4.9 None
ERR736856 Sensitive lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR3283031 Sensitive La3;lineage4.9 None
ERR1063855 Other lineage4.9 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4797184 Sensitive lineage4.9 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR6359069 Sensitive lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR12708392 Other lineage2.2.1 None
SRR10808805 Other La1;lineage4.9 None
ERR4814639 HR-TB lineage4.9 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR3283021 HR-TB lineage4.9 None
ERR926159 Sensitive lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
ERR108471 HR-TB lineage4.9 None
SRR1181349 Sensitive lineage4 None
SRR5341453 Other lineage4.9 None
ERR926154 Sensitive lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR133825 HR-TB La1;lineage4.9 None
ERR1023509 Other lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
SRR5341308 Sensitive lineage4.9 None
SRR12416840 MDR-TB lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
ERR3799304 Other lineage6.1.1 None
ERR779852 Sensitive lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
SRR5341298 Sensitive lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
ERR9787030 RR-TB lineage6.1.2 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR9971112 Other lineage2.2.1 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
SRR17658572 Sensitive lineage1.1.2 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR5341299 HR-TB lineage4.9 None
ERR473334 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR4831621 MDR-TB lineage2.2.1.1 None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR4769442 Sensitive lineage4.9 None
ERR4818536 Other lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
SRR29096717 Sensitive lineage4.9 None
ERR3445502 Sensitive lineage4.9;lineage7 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR6046385 Sensitive lineage4.9 None
SRR29096203 Sensitive lineage4.9 None
ERR2693252 Sensitive lineage4.9 None
SRR6045795 Sensitive lineage2.2.1 None
ERR4796254 Sensitive lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
SRR29096410 Other lineage4.9 None
ERR323062 Sensitive lineage4.9 None
SRR1158918 Sensitive lineage4.9 None
ERR11082350 MDR-TB lineage4.6.2.2 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR137286 Other lineage4.9 None
ERR9787014 Other lineage6.1.1 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR4819357 Sensitive lineage4.9 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR1063896 Sensitive None
ERR502511 Sensitive lineage4.9 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR1159378 Other lineage4.9 None
SRR6046210 Other lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR1791747 Other La1.8.1 None
SRR20969708 HR-TB lineage2.2 None
ERR3797048 Other La3;lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
ERR987765 Sensitive lineage4.6.1.1 None
ERR3275709 HR-TB lineage3 nl
ERR736848 Other lineage4.9 None
ERR6359066 HR-TB lineage4.9 None
ERR502510 Sensitive lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR3675235 Sensitive lineage4.9 None
ERR4821655 HR-TB lineage4.9 None
SRR29096879 Sensitive lineage4.9 None
SRR8692887 Other None
SRR7240033 Other La1.2;La1.8.1 None
SRR14801749 HR-TB lineage4.9 None
SRR11342660 MDR-TB lineage2.2.1 None
SRR16156188 Sensitive lineage4.9 None
ERR4769457 Other lineage4.9 None
ERR124636 Sensitive lineage4.9 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
ERR926161 Sensitive lineage4.9 None
SRR6789624 HR-TB lineage4.1.1.3 None
ERR3273109 HR-TB lineage4 None
ERR751326 Other lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR245794 HR-TB lineage4.3.4.2.1 None
SRR12416842 HR-TB lineage4.9 None
ERR6866639 Other lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR3675246 Other lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR9970978 Sensitive La1;lineage4.1.2 None
SRR5341467 Other lineage4.9 None
SRR6044835 Other lineage4.9 None
ERR736834 Sensitive lineage4.9 None
SRR3675585 Sensitive lineage4.9 None
SRR6045892 Sensitive lineage4.9 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR4818110 Sensitive lineage4.9 None
ERR4024991 Other lineage4.8;lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
ERR4797264 Sensitive lineage4.9 None
SRR1183965 Sensitive lineage4.9 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR6359070 Sensitive lineage4.9 None
SRR28351339 MDR-TB lineage4 None
ERR212001 HR-TB None
ERR4829606 Sensitive lineage4.1.2.1 None
ERR3283055 HR-TB lineage4.9 None
ERR4819462 Sensitive lineage4.9 None
ERR926156 Sensitive lineage4.9 None
ERR9786076 Sensitive lineage3 None
SRR28119827 Other La3;lineage4.9 None
ERR4797474 Sensitive lineage4.9 None
ERR6866022 Other lineage4.8;lineage4.9 None
SRR1173633 Other lineage4.9 None
ERR926165 Sensitive lineage4.9 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
SRR1175513 Sensitive lineage4.9 None
ERR4819809 HR-TB lineage4.6.2.2 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR3439432 Other M.canetti;lineage4.6.4;lineage4.9 None
SRR7535082 Sensitive lineage4.9 None
ERR926155 Sensitive lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR926157 Sensitive lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
ERR752229 Other lineage4.5 None
ERR323066 Sensitive lineage4.9 None
ERR1199132 Sensitive lineage4.6.1.1 None
ERR3797029 Other lineage4.9 None
SRR1173568 Sensitive lineage4.9 None
ERR4818710 Sensitive lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
SRR6044875 Sensitive lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR9786592 Other lineage4.3.4.2 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
ERR6358979 Other lineage4.9 None
ERR4817667 HR-TB lineage4.8 None
SRR10315466 RR-TB lineage2.2.1 None
ERR702405 Sensitive lineage4.9 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR20969731 Other lineage2.2.1 None
ERR736837 Pre-XDR-TB lineage4.9 None