Run ID: SRR7236177
Sample name:
Date: 2024-10-03T16:40:19.341424
Number of reads: 756062
Percentage reads mapped: 58.77
Median coverage: 28.0
Strain: La1.8.1
Spoligotype:
Drug-resistance: Other
Lineage | Family | RDs | Frequency |
---|---|---|---|
La1.8 | M.bovis | None | 1.0 |
La1.8.1 | M.bovis | None | 0.99 |
La1 | M.bovis | None | 0.95 |
Drug | Resistance | Supporting mutations | WHO confidence | Comment |
---|---|---|---|---|
rifampicin | ||||
isoniazid | ||||
ethambutol | ||||
pyrazinamide | pncA | p.His57Asp | Assoc w R | |
streptomycin | ||||
fluoroquinolones | ||||
moxifloxacin | ||||
ofloxacin | ||||
levofloxacin | ||||
ciprofloxacin | ||||
aminoglycosides | ||||
amikacin | ||||
capreomycin | ||||
kanamycin | ||||
cycloserine | ||||
ethionamide | ||||
clofazimine | ||||
para-aminosalicylic_acid | ||||
delamanid | ||||
bedaquiline | ||||
linezolid |
Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs | Confidence | Comment |
---|---|---|---|---|---|---|---|
pncA | 2289073 | p.His57Asp | missense_variant | 1.0 | pyrazinamide | Assoc w R |
Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs | Confidence |
---|---|---|---|---|---|---|
dnaA | 467 | p.His156Arg | missense_variant | 1.0 | isoniazid | Not assoc w R |
gyrB | 5752 | c.513G>A | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrB | 6406 | c.1167C>T | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrB | 6446 | p.Ala403Ser | missense_variant | 1.0 | levofloxacin | Not assoc w R |
moxifloxacin | Uncertain significance | |||||
gyrA | 7362 | p.Glu21Gln | missense_variant | 1.0 | levofloxacin | Not assoc w R |
moxifloxacin | Not assoc w R | |||||
gyrA | 7406 | c.105G>C | synonymous_variant | 0.28 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7412 | c.111C>G | synonymous_variant | 0.29 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7433 | c.132G>A | synonymous_variant | 0.32 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7442 | c.141G>C | synonymous_variant | 0.31 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7457 | c.156T>C | synonymous_variant | 0.35 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7463 | c.162G>C | synonymous_variant | 0.33 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7472 | c.171T>C | synonymous_variant | 0.3 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | ||||||
gyrA | 7475 | c.174A>G | synonymous_variant | 0.31 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7480 | p.Phe60Tyr | missense_variant | 0.31 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7484 | c.183T>C | synonymous_variant | 0.31 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7499 | c.198G>C | synonymous_variant | 0.34 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7526 | c.225G>C | synonymous_variant | 0.35 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7532 | c.231T>G | synonymous_variant | 0.35 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7541 | c.240C>G | synonymous_variant | 0.34 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7547 | c.246C>T | synonymous_variant | 0.35 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7585 | p.Ser95Thr | missense_variant | 1.0 | levofloxacin | Not assoc w R |
moxifloxacin | Not assoc w R | |||||
gyrA | 7694 | c.393A>G | synonymous_variant | 0.32 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7697 | c.396C>G | synonymous_variant | 0.3 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7706 | c.405C>T | synonymous_variant | 0.32 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7709 | c.408G>C | synonymous_variant | 0.32 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7710 | c.409T>C | synonymous_variant | 0.32 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7728 | c.427_429delAGGinsCGC | synonymous_variant | 0.37 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7763 | c.462T>G | synonymous_variant | 0.37 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7775 | c.474C>T | synonymous_variant | 0.29 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7784 | c.483A>G | synonymous_variant | 0.28 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7790 | c.489G>C | synonymous_variant | 0.25 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7796 | c.495G>T | synonymous_variant | 0.24 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7799 | c.498A>G | synonymous_variant | 0.22 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7802 | c.501C>G | synonymous_variant | 0.21 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7832 | c.531G>T | synonymous_variant | 0.28 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7835 | c.534A>G | synonymous_variant | 0.3 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7841 | c.540C>T | synonymous_variant | 0.3 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 7847 | c.546G>C | synonymous_variant | 0.3 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7859 | c.558A>C | synonymous_variant | 0.28 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 7865 | c.564T>C | synonymous_variant | 0.24 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8285 | c.984C>T | synonymous_variant | 1.0 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8407 | p.Gln369Arg | missense_variant | 0.88 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8442 | c.1141C>T | synonymous_variant | 0.21 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8453 | c.1152A>C | synonymous_variant | 0.23 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8456 | c.1155C>T | synonymous_variant | 0.22 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8459 | c.1158G>A | synonymous_variant | 0.22 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8462 | c.1161A>G | synonymous_variant | 0.26 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8471 | c.1170T>C | synonymous_variant | 0.24 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8477 | c.1176C>T | synonymous_variant | 0.24 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8480 | c.1179C>T | synonymous_variant | 0.24 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8486 | c.1185T>C | synonymous_variant | 0.26 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8504 | c.1203G>C | synonymous_variant | 0.29 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8513 | c.1212C>G | synonymous_variant | 0.29 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8516 | c.1215T>C | synonymous_variant | 0.29 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8519 | c.1218A>G | synonymous_variant | 0.29 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8520 | c.1219C>T | synonymous_variant | 0.3 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8546 | p.Asp415Glu | missense_variant | 0.31 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8852 | c.1551T>C | synonymous_variant | 0.18 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8858 | c.1557T>G | synonymous_variant | 0.18 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8867 | c.1566A>G | synonymous_variant | 0.2 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8870 | c.1569G>C | synonymous_variant | 0.2 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8873 | c.1572A>G | synonymous_variant | 0.2 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8876 | c.1575C>T | synonymous_variant | 0.19 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 8897 | c.1596T>C | synonymous_variant | 0.18 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 8903 | c.1602T>C | synonymous_variant | 0.18 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9143 | c.1842T>C | synonymous_variant | 1.0 | levofloxacin | Not assoc w R |
moxifloxacin | Not assoc w R | |||||
gyrA | 9217 | p.Asp639Ala | missense_variant | 0.92 | levofloxacin | Uncertain significance |
moxifloxacin | Uncertain significance | |||||
gyrA | 9275 | c.1974G>A | synonymous_variant | 0.17 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9293 | c.1992G>C | synonymous_variant | 0.17 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9296 | c.1995T>C | synonymous_variant | 0.17 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
gyrA | 9304 | p.Gly668Asp | missense_variant | 1.0 | levofloxacin | Not assoc w R |
moxifloxacin | Not assoc w R | |||||
gyrA | 9317 | c.2016G>T | synonymous_variant | 0.16 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9356 | c.2055G>A | synonymous_variant | 0.14 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9383 | c.2082T>C | synonymous_variant | 0.15 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9386 | c.2085T>G | synonymous_variant | 0.15 | levofloxacin | |
moxifloxacin | ||||||
gyrA | 9407 | c.2106C>T | synonymous_variant | 0.15 | levofloxacin | Not assoc w R - Interim |
moxifloxacin | Not assoc w R - Interim | |||||
Rv0010c | 13197 | p.Thr121Ser | missense_variant | 1.0 | isoniazid | Not assoc w R |
Rv0010c | 13228 | c.330delG | frameshift_variant | 1.0 | isoniazid | Uncertain significance |
Rv0010c | 13460 | c.99T>C | synonymous_variant | 1.0 | isoniazid | Not assoc w R |
fgd1 | 491742 | c.960T>C | synonymous_variant | 1.0 | pretomanid | |
delamanid | Not assoc w R - Interim | |||||
clofazimine | Not assoc w R | |||||
Rv0565c | 657578 | c.-108T>C | upstream_gene_variant | 1.0 | ethionamide | |
rpoB | 760121 | c.315T>C | synonymous_variant | 0.23 | rifampicin | Not assoc w R - Interim |
rpoB | 760130 | p.Asp108Glu | missense_variant | 0.23 | rifampicin | Uncertain significance |
rpoB | 760136 | c.330G>A | synonymous_variant | 0.23 | rifampicin | |
rpoB | 760139 | c.333A>T | synonymous_variant | 0.23 | rifampicin | |
rpoB | 760142 | c.336C>G | synonymous_variant | 0.23 | rifampicin | |
rpoB | 760181 | c.375T>C | synonymous_variant | 0.36 | rifampicin | Not assoc w R - Interim |
rpoB | 760184 | c.378A>G | synonymous_variant | 0.34 | rifampicin | Not assoc w R - Interim |
rpoB | 760196 | c.390C>G | synonymous_variant | 0.33 | rifampicin | Not assoc w R - Interim |
rpoB | 760235 | c.429T>C | synonymous_variant | 0.31 | rifampicin | Not assoc w R - Interim |
rpoB | 760244 | c.438G>C | synonymous_variant | 0.35 | rifampicin | Not assoc w R - Interim |
rpoB | 760283 | c.477G>C | synonymous_variant | 0.46 | rifampicin | Not assoc w R - Interim |
rpoB | 760298 | c.492G>C | synonymous_variant | 0.45 | rifampicin | Not assoc w R - Interim |
rpoB | 760310 | c.504G>C | synonymous_variant | 0.44 | rifampicin | |
rpoB | 760316 | c.510C>G | synonymous_variant | 0.45 | rifampicin | |
rpoB | 760325 | c.519G>C | synonymous_variant | 0.44 | rifampicin | Not assoc w R - Interim |
rpoB | 760331 | c.525G>C | synonymous_variant | 0.44 | rifampicin | |
rpoB | 760334 | c.528G>T | synonymous_variant | 0.44 | rifampicin | |
rpoB | 760340 | c.534G>T | synonymous_variant | 0.45 | rifampicin | Not assoc w R - Interim |
rpoB | 760357 | p.Thr184Ser | missense_variant | 0.37 | rifampicin | Uncertain significance |
rpoB | 760361 | c.555T>C | synonymous_variant | 0.38 | rifampicin | Not assoc w R - Interim |
rpoB | 760376 | p.Asp190Glu | missense_variant | 0.3 | rifampicin | Uncertain significance |
rpoB | 760406 | c.600G>C | synonymous_variant | 0.33 | rifampicin | |
rpoB | 760407 | p.Ser201Gly | missense_variant | 0.33 | rifampicin | Uncertain significance |
rpoB | 760415 | c.609C>T | synonymous_variant | 0.36 | rifampicin | Not assoc w R - Interim |
rpoB | 760424 | c.618C>G | synonymous_variant | 0.37 | rifampicin | Not assoc w R - Interim |
rpoB | 760430 | c.624T>C | synonymous_variant | 0.36 | rifampicin | Not assoc w R - Interim |
rpoB | 760457 | c.651C>T | synonymous_variant | 0.33 | rifampicin | Not assoc w R - Interim |
rpoB | 760463 | c.657C>T | synonymous_variant | 0.34 | rifampicin | Not assoc w R - Interim |
rpoB | 760475 | c.669A>G | synonymous_variant | 0.26 | rifampicin | Not assoc w R - Interim |
rpoB | 760478 | c.672C>T | synonymous_variant | 0.24 | rifampicin | Not assoc w R - Interim |
rpoB | 760481 | c.675G>T | synonymous_variant | 0.24 | rifampicin | |
rpoB | 760484 | c.678A>G | synonymous_variant | 0.26 | rifampicin | Not assoc w R - Interim |
rpoB | 760502 | c.696C>G | synonymous_variant | 0.21 | rifampicin | Not assoc w R - Interim |
rpoB | 760522 | p.Ser239Asn | missense_variant | 0.2 | rifampicin | Uncertain significance |
rpoB | 760533 | p.Val243Thr | missense_variant | 0.16 | rifampicin | |
rpoB | 760541 | c.735G>C | synonymous_variant | 0.17 | rifampicin | Not assoc w R - Interim |
rpoB | 760547 | c.741G>C | synonymous_variant | 0.17 | rifampicin | Not assoc w R - Interim |
rpoB | 760805 | c.999G>C | synonymous_variant | 0.22 | rifampicin | |
rpoB | 760817 | c.1011A>G | synonymous_variant | 0.24 | rifampicin | |
rpoB | 760820 | c.1014T>C | synonymous_variant | 0.26 | rifampicin | |
rpoB | 760826 | c.1020C>G | synonymous_variant | 0.27 | rifampicin | Not assoc w R - Interim |
rpoB | 760830 | c.1024T>C | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoB | 760841 | c.1035T>C | synonymous_variant | 0.28 | rifampicin | Not assoc w R - Interim |
rpoB | 760859 | c.1053T>C | synonymous_variant | 0.28 | rifampicin | |
rpoB | 760862 | c.1056G>C | synonymous_variant | 0.28 | rifampicin | Not assoc w R - Interim |
rpoB | 760877 | c.1071G>C | synonymous_variant | 0.29 | rifampicin | |
rpoB | 760883 | c.1077G>C | synonymous_variant | 0.29 | rifampicin | |
rpoB | 760886 | c.1080A>G | synonymous_variant | 0.29 | rifampicin | |
rpoB | 760887 | p.Thr361Val | missense_variant | 0.29 | rifampicin | Uncertain significance |
rpoB | 760910 | c.1104C>T | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoB | 760916 | c.1110C>T | synonymous_variant | 0.27 | rifampicin | Not assoc w R - Interim |
rpoB | 760919 | c.1113C>T | synonymous_variant | 0.28 | rifampicin | |
rpoB | 760925 | c.1119T>C | synonymous_variant | 0.29 | rifampicin | |
rpoB | 760928 | c.1122G>C | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoB | 760931 | c.1125C>G | synonymous_variant | 0.28 | rifampicin | |
rpoB | 760946 | c.1140A>G | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoB | 760958 | c.1152G>C | synonymous_variant | 0.24 | rifampicin | |
rpoB | 760965 | p.Met387Leu | missense_variant | 0.25 | rifampicin | Uncertain significance |
rpoB | 760970 | c.1164G>C | synonymous_variant | 0.24 | rifampicin | Not assoc w R - Interim |
rpoB | 760973 | c.1167G>C | synonymous_variant | 0.23 | rifampicin | |
rpoB | 761234 | c.1428G>C | synonymous_variant | 0.24 | rifampicin | Not assoc w R - Interim |
rpoB | 761249 | c.1443A>G | synonymous_variant | 0.21 | rifampicin | Not assoc w R - Interim |
rpoB | 761657 | c.1851C>T | synonymous_variant | 0.23 | rifampicin | Not assoc w R - Interim |
rpoB | 761666 | c.1860G>C | synonymous_variant | 0.28 | rifampicin | |
rpoB | 761669 | c.1863C>T | synonymous_variant | 0.26 | rifampicin | |
rpoB | 762053 | c.2247T>C | synonymous_variant | 0.19 | rifampicin | Not assoc w R - Interim |
rpoB | 762062 | c.2256T>C | synonymous_variant | 0.19 | rifampicin | Not assoc w R - Interim |
rpoB | 762065 | c.2259T>C | synonymous_variant | 0.2 | rifampicin | Not assoc w R - Interim |
rpoB | 762083 | c.2277T>A | synonymous_variant | 0.19 | rifampicin | |
rpoB | 762086 | c.2280G>C | synonymous_variant | 0.19 | rifampicin | Not assoc w R - Interim |
rpoB | 762101 | c.2295C>G | synonymous_variant | 0.24 | rifampicin | Not assoc w R - Interim |
rpoB | 762114 | p.Ile770Val | missense_variant | 0.25 | rifampicin | Uncertain significance |
rpoB | 762131 | c.2325C>G | synonymous_variant | 0.24 | rifampicin | |
rpoB | 762137 | c.2331C>T | synonymous_variant | 0.23 | rifampicin | Not assoc w R - Interim |
rpoB | 762140 | c.2334G>C | synonymous_variant | 0.23 | rifampicin | |
rpoB | 762143 | c.2337T>C | synonymous_variant | 0.23 | rifampicin | |
rpoB | 762149 | c.2343G>C | synonymous_variant | 0.23 | rifampicin | Not assoc w R - Interim |
rpoB | 762158 | c.2352G>C | synonymous_variant | 0.23 | rifampicin | Not assoc w R - Interim |
rpoB | 762185 | c.2379G>C | synonymous_variant | 0.27 | rifampicin | Not assoc w R - Interim |
rpoB | 762233 | c.2427G>C | synonymous_variant | 0.35 | rifampicin | Not assoc w R - Interim |
rpoB | 762245 | c.2439G>C | synonymous_variant | 0.35 | rifampicin | Not assoc w R - Interim |
rpoB | 762284 | c.2478G>T | synonymous_variant | 0.36 | rifampicin | |
rpoB | 762287 | c.2481C>T | synonymous_variant | 0.36 | rifampicin | |
rpoB | 762293 | c.2487T>C | synonymous_variant | 0.33 | rifampicin | Not assoc w R - Interim |
rpoB | 762308 | c.2502G>C | synonymous_variant | 0.33 | rifampicin | |
rpoB | 762338 | c.2532T>C | synonymous_variant | 0.24 | rifampicin | |
rpoB | 762341 | c.2535G>C | synonymous_variant | 0.24 | rifampicin | |
rpoB | 762347 | c.2541T>C | synonymous_variant | 0.27 | rifampicin | |
rpoB | 762350 | c.2544C>T | synonymous_variant | 0.27 | rifampicin | |
rpoB | 762362 | p.Glu852Asp | missense_variant | 0.26 | rifampicin | |
rpoB | 762404 | c.2598T>C | synonymous_variant | 0.27 | rifampicin | Not assoc w R - Interim |
rpoC | 762410 | c.-960T>C | upstream_gene_variant | 0.29 | rifampicin | |
rpoB | 762470 | c.2664G>C | synonymous_variant | 0.24 | rifampicin | Not assoc w R - Interim |
rpoB | 762827 | c.3021G>C | synonymous_variant | 0.17 | rifampicin | Not assoc w R - Interim |
rpoB | 762833 | c.3027C>T | synonymous_variant | 0.17 | rifampicin | Not assoc w R - Interim |
rpoC | 762839 | c.-531G>A | upstream_gene_variant | 0.19 | rifampicin | |
rpoB | 762857 | c.3051C>G | synonymous_variant | 0.24 | rifampicin | Not assoc w R - Interim |
rpoB | 762863 | c.3057T>C | synonymous_variant | 0.25 | rifampicin | Not assoc w R - Interim |
rpoB | 762879 | p.Met1025Leu | missense_variant | 0.3 | rifampicin | Uncertain significance |
rpoB | 762920 | c.3114C>T | synonymous_variant | 0.33 | rifampicin | Not assoc w R - Interim |
rpoB | 762929 | c.3123G>C | synonymous_variant | 0.33 | rifampicin | Not assoc w R - Interim |
rpoB | 762959 | c.3153G>C | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoB | 762962 | c.3156C>T | synonymous_variant | 0.31 | rifampicin | Not assoc w R - Interim |
rpoB | 762995 | c.3189G>T | synonymous_variant | 0.27 | rifampicin | Not assoc w R - Interim |
rpoB | 763031 | c.3225T>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R |
rpoB | 763053 | c.3247T>C | synonymous_variant | 0.17 | rifampicin | Not assoc w R - Interim |
rpoB | 763070 | c.3264T>C | synonymous_variant | 0.17 | rifampicin | Not assoc w R - Interim |
rpoB | 763085 | c.3279C>G | synonymous_variant | 0.19 | rifampicin | Not assoc w R - Interim |
rpoC | 763103 | c.-267G>C | upstream_gene_variant | 0.16 | rifampicin | |
rpoB | 763115 | c.3309T>C | synonymous_variant | 0.15 | rifampicin | Not assoc w R - Interim |
rpoC | 763408 | c.39T>C | synonymous_variant | 0.21 | rifampicin | Not assoc w R - Interim |
rpoC | 763411 | c.42T>C | synonymous_variant | 0.21 | rifampicin | |
rpoC | 763414 | c.45T>C | synonymous_variant | 0.2 | rifampicin | |
rpoC | 763423 | p.Glu18Asp | missense_variant | 0.2 | rifampicin | Uncertain significance |
rpoC | 763430 | c.61_63delAGGinsCGT | synonymous_variant | 0.21 | rifampicin | |
rpoC | 763433 | p.Gln22Asn | missense_variant | 0.21 | rifampicin | |
rpoC | 763443 | p.Tyr25Phe | missense_variant | 0.2 | rifampicin | |
rpoC | 763456 | c.87A>G | synonymous_variant | 0.28 | rifampicin | Not assoc w R - Interim |
rpoC | 763468 | c.99G>C | synonymous_variant | 0.26 | rifampicin | Not assoc w R - Interim |
rpoC | 763486 | c.117T>C | synonymous_variant | 0.3 | rifampicin | Not assoc w R - Interim |
rpoC | 763492 | c.123G>T | synonymous_variant | 0.32 | rifampicin | |
rpoC | 763528 | c.159G>A | synonymous_variant | 0.3 | rifampicin | Not assoc w R - Interim |
rpoC | 763546 | c.177A>G | synonymous_variant | 0.27 | rifampicin | Not assoc w R - Interim |
rpoC | 763558 | c.189C>T | synonymous_variant | 0.33 | rifampicin | Not assoc w R - Interim |
rpoC | 763570 | c.201G>C | synonymous_variant | 0.37 | rifampicin | Not assoc w R - Interim |
rpoC | 763573 | c.204G>C | synonymous_variant | 0.37 | rifampicin | Not assoc w R - Interim |
rpoC | 763594 | c.225C>T | synonymous_variant | 0.37 | rifampicin | Not assoc w R - Interim |
rpoC | 763615 | c.246G>C | synonymous_variant | 0.41 | rifampicin | Not assoc w R - Interim |
rpoC | 763618 | c.249C>T | synonymous_variant | 0.43 | rifampicin | |
rpoC | 763633 | c.264T>C | synonymous_variant | 0.43 | rifampicin | Not assoc w R - Interim |
rpoC | 763660 | c.291T>G | synonymous_variant | 0.46 | rifampicin | Not assoc w R - Interim |
rpoC | 763666 | c.297G>A | synonymous_variant | 0.46 | rifampicin | |
rpoC | 763675 | c.306C>G | synonymous_variant | 0.44 | rifampicin | Not assoc w R - Interim |
rpoC | 763702 | c.333C>G | synonymous_variant | 0.34 | rifampicin | Not assoc w R - Interim |
rpoC | 763709 | c.340C>T | synonymous_variant | 0.31 | rifampicin | |
rpoC | 763714 | c.345G>C | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoC | 763717 | c.348T>C | synonymous_variant | 0.34 | rifampicin | Not assoc w R - Interim |
rpoC | 763723 | c.354G>C | synonymous_variant | 0.33 | rifampicin | |
rpoC | 763732 | c.363C>T | synonymous_variant | 0.32 | rifampicin | |
rpoC | 763741 | c.372C>T | synonymous_variant | 0.31 | rifampicin | |
rpoC | 763747 | c.378G>A | synonymous_variant | 0.3 | rifampicin | |
rpoC | 763765 | c.396T>G | synonymous_variant | 0.34 | rifampicin | Not assoc w R - Interim |
rpoC | 763792 | p.Glu141Asp | missense_variant | 0.35 | rifampicin | |
rpoC | 763807 | c.438T>C | synonymous_variant | 0.34 | rifampicin | Not assoc w R - Interim |
rpoC | 763813 | c.444C>G | synonymous_variant | 0.36 | rifampicin | |
rpoC | 763831 | c.462A>G | synonymous_variant | 0.33 | rifampicin | |
rpoC | 763837 | c.468G>C | synonymous_variant | 0.35 | rifampicin | |
rpoC | 763840 | c.471G>T | synonymous_variant | 0.33 | rifampicin | |
rpoC | 763858 | c.489A>G | synonymous_variant | 0.41 | rifampicin | |
rpoC | 763861 | c.492C>T | synonymous_variant | 0.36 | rifampicin | |
rpoC | 763872 | p.Gly168Ala | missense_variant | 0.35 | rifampicin | |
rpoC | 763876 | p.Glu169Asp | missense_variant | 0.35 | rifampicin | |
rpoC | 763879 | c.510A>G | synonymous_variant | 0.37 | rifampicin | |
rpoC | 763882 | c.513G>A | synonymous_variant | 0.37 | rifampicin | |
rpoC | 763891 | c.522G>C | synonymous_variant | 0.37 | rifampicin | |
rpoC | 763894 | c.525A>G | synonymous_variant | 0.37 | rifampicin | |
rpoC | 763900 | c.531G>C | synonymous_variant | 0.39 | rifampicin | Not assoc w R - Interim |
rpoC | 763921 | c.552G>C | synonymous_variant | 0.34 | rifampicin | |
rpoC | 763924 | c.555G>A | synonymous_variant | 0.32 | rifampicin | |
rpoC | 763930 | c.561G>A | synonymous_variant | 0.31 | rifampicin | |
rpoC | 763933 | c.564C>T | synonymous_variant | 0.31 | rifampicin | Not assoc w R - Interim |
rpoC | 763940 | p.Ala191Ser | missense_variant | 0.29 | rifampicin | Uncertain significance |
rpoC | 763945 | c.576T>C | synonymous_variant | 0.24 | rifampicin | |
rpoC | 763947 | p.Ala193Val | missense_variant | 0.25 | rifampicin | Uncertain significance |
rpoC | 763951 | c.582G>C | synonymous_variant | 0.26 | rifampicin | Not assoc w R - Interim |
rpoC | 763960 | c.591T>G | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoC | 763969 | c.600C>T | synonymous_variant | 0.3 | rifampicin | Not assoc w R - Interim |
rpoC | 763978 | c.609C>T | synonymous_variant | 0.28 | rifampicin | |
rpoC | 763987 | c.618C>T | synonymous_variant | 0.23 | rifampicin | |
rpoC | 763991 | p.Ile208Leu | missense_variant | 0.23 | rifampicin | |
rpoC | 763996 | c.627T>C | synonymous_variant | 0.24 | rifampicin | |
rpoC | 764005 | c.636G>C | synonymous_variant | 0.27 | rifampicin | Not assoc w R - Interim |
rpoC | 764044 | c.675T>C | synonymous_variant | 0.29 | rifampicin | |
rpoC | 764059 | c.690G>T | synonymous_variant | 0.22 | rifampicin | |
rpoC | 764153 | p.Gln262Lys | missense_variant | 0.25 | rifampicin | |
rpoC | 764161 | c.792G>C | synonymous_variant | 0.27 | rifampicin | |
rpoC | 764254 | c.885G>C | synonymous_variant | 0.33 | rifampicin | |
rpoC | 764257 | c.888G>C | synonymous_variant | 0.35 | rifampicin | |
rpoC | 764263 | c.894G>C | synonymous_variant | 0.39 | rifampicin | |
rpoC | 764266 | c.897T>C | synonymous_variant | 0.39 | rifampicin | |
rpoC | 764272 | c.903G>C | synonymous_variant | 0.45 | rifampicin | |
rpoC | 764278 | c.909A>G | synonymous_variant | 0.5 | rifampicin | Not assoc w R - Interim |
rpoC | 764293 | c.924G>C | synonymous_variant | 0.45 | rifampicin | Not assoc w R - Interim |
rpoC | 764297 | p.Met310Leu | missense_variant | 0.48 | rifampicin | |
rpoC | 764344 | c.975C>T | synonymous_variant | 0.34 | rifampicin | |
rpoC | 764353 | c.984G>T | synonymous_variant | 0.35 | rifampicin | Not assoc w R - Interim |
rpoC | 764365 | c.996C>T | synonymous_variant | 0.39 | rifampicin | Not assoc w R - Interim |
rpoC | 764371 | c.1002G>C | synonymous_variant | 0.41 | rifampicin | Not assoc w R - Interim |
rpoC | 764380 | c.1011G>C | synonymous_variant | 0.41 | rifampicin | Not assoc w R - Interim |
rpoC | 764387 | c.1018T>C | synonymous_variant | 0.38 | rifampicin | Not assoc w R - Interim |
rpoC | 764405 | c.1036_1038delAGGinsCGC | synonymous_variant | 0.33 | rifampicin | Not assoc w R - Interim |
rpoC | 764431 | c.1062G>C | synonymous_variant | 0.31 | rifampicin | Not assoc w R - Interim |
rpoC | 764434 | c.1065A>G | synonymous_variant | 0.32 | rifampicin | Not assoc w R - Interim |
rpoC | 764435 | c.1066_1068delAGGinsCGA | synonymous_variant | 0.32 | rifampicin | |
rpoC | 764446 | c.1077T>C | synonymous_variant | 0.33 | rifampicin | |
rpoC | 764449 | c.1080G>C | synonymous_variant | 0.32 | rifampicin | |
rpoC | 764458 | c.1089G>C | synonymous_variant | 0.33 | rifampicin | Not assoc w R - Interim |
rpoC | 764461 | c.1092A>G | synonymous_variant | 0.34 | rifampicin | Not assoc w R - Interim |
rpoC | 764485 | c.1116G>C | synonymous_variant | 0.37 | rifampicin | |
rpoC | 764491 | c.1122G>T | synonymous_variant | 0.38 | rifampicin | |
rpoC | 764497 | c.1128A>G | synonymous_variant | 0.38 | rifampicin | Not assoc w R - Interim |
rpoC | 764500 | c.1131C>G | synonymous_variant | 0.39 | rifampicin | |
rpoC | 764521 | c.1152T>C | synonymous_variant | 0.42 | rifampicin | Not assoc w R - Interim |
rpoC | 764524 | c.1155C>T | synonymous_variant | 0.41 | rifampicin | |
rpoC | 764527 | c.1158C>T | synonymous_variant | 0.42 | rifampicin | Not assoc w R - Interim |
rpoC | 764536 | c.1167G>T | synonymous_variant | 0.44 | rifampicin | Not assoc w R - Interim |
rpoC | 764539 | c.1170C>G | synonymous_variant | 0.43 | rifampicin | Not assoc w R - Interim |
rpoC | 764575 | c.1206T>G | synonymous_variant | 0.52 | rifampicin | Not assoc w R - Interim |
rpoC | 764605 | c.1236G>C | synonymous_variant | 0.55 | rifampicin | Not assoc w R - Interim |
rpoC | 764611 | c.1242G>T | synonymous_variant | 0.57 | rifampicin | Not assoc w R - Interim |
rpoC | 764623 | c.1254C>G | synonymous_variant | 0.56 | rifampicin | Not assoc w R - Interim |
rpoC | 764626 | c.1257C>T | synonymous_variant | 0.56 | rifampicin | Not assoc w R - Interim |
rpoC | 764632 | c.1263T>C | synonymous_variant | 0.57 | rifampicin | Not assoc w R - Interim |
rpoC | 764650 | c.1281G>T | synonymous_variant | 0.47 | rifampicin | Not assoc w R - Interim |
rpoC | 764701 | c.1332C>G | synonymous_variant | 0.38 | rifampicin | Not assoc w R - Interim |
rpoC | 764707 | c.1338G>C | synonymous_variant | 0.36 | rifampicin | Not assoc w R - Interim |
rpoC | 764713 | c.1344G>T | synonymous_variant | 0.36 | rifampicin | Not assoc w R - Interim |
rpoC | 764716 | c.1347G>C | synonymous_variant | 0.37 | rifampicin | Not assoc w R - Interim |
rpoC | 764746 | c.1377G>T | synonymous_variant | 0.38 | rifampicin | Not assoc w R - Interim |
rpoC | 764752 | c.1383G>C | synonymous_variant | 0.4 | rifampicin | Not assoc w R - Interim |
rpoC | 764758 | c.1389C>G | synonymous_variant | 0.41 | rifampicin | Not assoc w R - Interim |
rpoC | 764764 | c.1395T>C | synonymous_variant | 0.4 | rifampicin | Not assoc w R - Interim |
rpoC | 764803 | c.1434C>T | synonymous_variant | 0.42 | rifampicin | Not assoc w R - Interim |
rpoC | 764809 | c.1440C>T | synonymous_variant | 0.4 | rifampicin | Not assoc w R |
rpoC | 764815 | c.1446A>G | synonymous_variant | 0.37 | rifampicin | Not assoc w R - Interim |
rpoC | 764824 | c.1455T>C | synonymous_variant | 0.32 | rifampicin | Not assoc w R - Interim |
rpoC | 764827 | c.1458G>C | synonymous_variant | 0.34 | rifampicin | Not assoc w R - Interim |
rpoC | 764851 | c.1482C>T | synonymous_variant | 0.3 | rifampicin | |
rpoC | 764858 | c.1489T>C | synonymous_variant | 0.31 | rifampicin | Not assoc w R - Interim |
rpoC | 764869 | c.1500C>T | synonymous_variant | 0.28 | rifampicin | Not assoc w R - Interim |
rpoC | 764875 | c.1506C>T | synonymous_variant | 0.26 | rifampicin | |
rpoC | 764878 | c.1509C>G | synonymous_variant | 0.25 | rifampicin | |
rpoC | 764887 | c.1518G>C | synonymous_variant | 0.26 | rifampicin | Not assoc w R - Interim |
rpoC | 764888 | c.1519T>C | synonymous_variant | 0.26 | rifampicin | Not assoc w R - Interim |
rpoC | 764911 | c.1542A>G | synonymous_variant | 0.25 | rifampicin | |
rpoC | 764912 | p.Met515Gln | missense_variant | 0.25 | rifampicin | Uncertain significance |
rpoC | 764935 | c.1566T>C | synonymous_variant | 0.25 | rifampicin | |
rpoC | 764948 | c.1579T>C | synonymous_variant | 0.22 | rifampicin | Not assoc w R - Interim |
rpoC | 764968 | c.1599T>C | synonymous_variant | 0.16 | rifampicin | Not assoc w R - Interim |
rpoC | 765412 | c.2043T>C | synonymous_variant | 0.18 | rifampicin | |
rpoC | 765425 | p.Lys686Glu | missense_variant | 0.21 | rifampicin | |
rpoC | 765445 | c.2076G>C | synonymous_variant | 0.18 | rifampicin | Not assoc w R - Interim |
rpoC | 765452 | p.Ala695Arg | missense_variant | 0.16 | rifampicin | |
rpoC | 765466 | c.2097C>T | synonymous_variant | 0.19 | rifampicin | |
rpoC | 765478 | c.2109T>C | synonymous_variant | 0.2 | rifampicin | Not assoc w R - Interim |
rpoC | 765480 | p.Tyr704Phe | missense_variant | 0.2 | rifampicin | Uncertain significance |
rpoC | 765496 | c.2127C>G | synonymous_variant | 0.21 | rifampicin | |
rpoC | 765499 | c.2130C>G | synonymous_variant | 0.21 | rifampicin | Not assoc w R - Interim |
rpoC | 765529 | c.2160C>T | synonymous_variant | 0.19 | rifampicin | |
rpoC | 765533 | p.Tyr722His | missense_variant | 0.19 | rifampicin | Uncertain significance |
rpoC | 765547 | c.2178C>T | synonymous_variant | 0.2 | rifampicin | Not assoc w R - Interim |
rpoC | 765548 | c.2179_2181delAGCinsTCG | synonymous_variant | 0.2 | rifampicin | |
rpoC | 765553 | c.2184C>T | synonymous_variant | 0.21 | rifampicin | Not assoc w R - Interim |
rpoC | 765556 | c.2187G>C | synonymous_variant | 0.21 | rifampicin | |
rpoC | 765562 | c.2193G>C | synonymous_variant | 0.21 | rifampicin | |
rpoC | 765577 | c.2208G>T | synonymous_variant | 0.2 | rifampicin | |
rpoC | 765871 | c.2502T>C | synonymous_variant | 0.19 | rifampicin | |
rpoC | 765875 | p.Val836Ile | missense_variant | 0.2 | rifampicin | Uncertain significance |
rpoC | 765886 | c.2517C>G | synonymous_variant | 0.2 | rifampicin | |
rpoC | 765904 | c.2535C>G | synonymous_variant | 0.17 | rifampicin | Not assoc w R - Interim |
rpoC | 765908 | c.2539C>T | synonymous_variant | 0.18 | rifampicin | |
rpoC | 765934 | c.2565C>T | synonymous_variant | 0.18 | rifampicin | |
rpoC | 765940 | c.2571A>T | synonymous_variant | 0.18 | rifampicin | Not assoc w R - Interim |
rpoC | 765946 | c.2577C>T | synonymous_variant | 0.19 | rifampicin | |
rpoC | 765947 | c.2578T>C | synonymous_variant | 0.19 | rifampicin | Not assoc w R - Interim |
rpoC | 765952 | c.2583G>C | synonymous_variant | 0.18 | rifampicin | |
rpoC | 765961 | c.2592G>T | synonymous_variant | 0.2 | rifampicin | |
rpoC | 765962 | c.2593T>C | synonymous_variant | 0.2 | rifampicin | |
rpoC | 765967 | c.2598C>T | synonymous_variant | 0.2 | rifampicin | Not assoc w R - Interim |
rpoC | 765979 | c.2610C>G | synonymous_variant | 0.23 | rifampicin | Not assoc w R - Interim |
rpoC | 765982 | c.2613C>T | synonymous_variant | 0.23 | rifampicin | Not assoc w R - Interim |
rpoC | 765994 | c.2625A>T | synonymous_variant | 0.24 | rifampicin | Not assoc w R - Interim |
rpoC | 766012 | c.2643C>G | synonymous_variant | 0.17 | rifampicin | Not assoc w R - Interim |
rpoC | 767098 | c.3729T>C | synonymous_variant | 0.21 | rifampicin | Not assoc w R - Interim |
rpoC | 767104 | c.3735C>G | synonymous_variant | 0.18 | rifampicin | Not assoc w R - Interim |
rpoC | 767105 | p.Asn1246Gln | missense_variant | 0.18 | rifampicin | Uncertain significance |
rpoC | 767119 | c.3750A>G | synonymous_variant | 0.17 | rifampicin | Not assoc w R - Interim |
rpoC | 767134 | c.3765C>T | synonymous_variant | 0.15 | rifampicin | Not assoc w R - Interim |
rpoC | 767158 | c.3789T>C | synonymous_variant | 0.19 | rifampicin | Not assoc w R - Interim |
rpoC | 767162 | p.Asn1265Ala | missense_variant | 0.2 | rifampicin | |
rpoC | 767167 | c.3798C>T | synonymous_variant | 0.21 | rifampicin | |
rpoC | 767174 | p.Asn1269Asp | missense_variant | 0.21 | rifampicin | |
rpoC | 767180 | p.Ala1271Gln | missense_variant | 0.2 | rifampicin | |
rpoC | 767191 | c.3822C>G | synonymous_variant | 0.2 | rifampicin | Not assoc w R - Interim |
rpoC | 767197 | c.3828G>A | synonymous_variant | 0.21 | rifampicin | Not assoc w R - Interim |
rpoC | 767221 | c.3852C>G | synonymous_variant | 0.2 | rifampicin | Not assoc w R - Interim |
mmpL5 | 775639 | p.Ile948Val | missense_variant | 1.0 | bedaquiline | Not assoc w R - Interim |
clofazimine | Not assoc w R | |||||
mmpL5 | 775814 | c.2667C>G | synonymous_variant | 0.18 | bedaquiline | |
clofazimine | ||||||
mmpL5 | 775817 | c.2664T>C | synonymous_variant | 0.18 | bedaquiline | Not assoc w R - Interim |
clofazimine | Not assoc w R - Interim | |||||
mmpL5 | 775826 | c.2655G>C | synonymous_variant | 0.17 | bedaquiline | |
clofazimine | ||||||
mmpL5 | 775829 | c.2652C>G | synonymous_variant | 0.19 | bedaquiline | |
clofazimine | ||||||
mmpL5 | 775834 | p.Ala883Ser | missense_variant | 0.16 | bedaquiline | |
clofazimine | ||||||
mmpL5 | 775838 | c.2643G>C | synonymous_variant | 0.18 | bedaquiline | |
clofazimine | ||||||
mmpL5 | 775847 | c.2634G>T | synonymous_variant | 0.18 | bedaquiline | Not assoc w R - Interim |
clofazimine | Not assoc w R - Interim | |||||
mmpL5 | 775851 | p.Ser877Thr | missense_variant | 0.2 | bedaquiline | |
clofazimine | ||||||
mmpL5 | 775856 | c.2625T>C | synonymous_variant | 0.2 | bedaquiline | |
clofazimine | ||||||
mmpL5 | 775865 | c.2616T>C | synonymous_variant | 0.19 | bedaquiline | |
clofazimine | ||||||
mmpL5 | 775877 | c.2604C>G | synonymous_variant | 0.19 | bedaquiline | |
clofazimine | ||||||
mmpL5 | 775883 | p.Ile866Leu | missense_variant | 0.19 | bedaquiline | |
clofazimine | ||||||
mmpL5 | 775886 | c.2595A>C | synonymous_variant | 0.19 | bedaquiline | |
clofazimine | ||||||
mmpL5 | 775892 | c.2589C>T | synonymous_variant | 0.21 | bedaquiline | |
clofazimine | ||||||
mmpL5 | 775904 | c.2577G>A | synonymous_variant | 0.17 | bedaquiline | |
clofazimine | ||||||
mmpL5 | 775909 | p.Leu858Phe | missense_variant | 0.18 | bedaquiline | |
clofazimine | ||||||
mmpL5 | 775915 | p.Ala856Ser | missense_variant | 0.19 | bedaquiline | |
clofazimine | ||||||
mmpL5 | 775916 | c.2565T>C | synonymous_variant | 0.19 | bedaquiline | |
clofazimine | ||||||
mmpL5 | 775921 | c.2560C>T | synonymous_variant | 0.19 | bedaquiline | |
clofazimine | ||||||
mmpL5 | 775924 | c.2557C>T | synonymous_variant | 0.19 | bedaquiline | |
clofazimine | Not assoc w R - Interim | |||||
mmpL5 | 775951 | c.2530C>T | synonymous_variant | 0.25 | bedaquiline | |
clofazimine | ||||||
mmpL5 | 775981 | p.Leu834Met | missense_variant | 0.22 | bedaquiline | |
clofazimine | ||||||
mmpL5 | 776100 | p.Thr794Ile | missense_variant | 1.0 | bedaquiline | Not assoc w R - Interim |
clofazimine | Not assoc w R | |||||
rpsL | 781395 | c.-165T>C | upstream_gene_variant | 1.0 | streptomycin | Not assoc w R |
rpsL | 781595 | c.36T>C | synonymous_variant | 0.21 | streptomycin | |
rpsL | 781598 | c.39G>C | synonymous_variant | 0.21 | streptomycin | |
rpsL | 781605 | p.Ile16Val | missense_variant | 0.22 | streptomycin | Uncertain significance |
rpsL | 781608 | p.Ser17Ala | missense_variant | 0.22 | streptomycin | |
rpsL | 781628 | c.69T>C | synonymous_variant | 0.25 | streptomycin | Not assoc w R - Interim |
rpsL | 781631 | c.72G>C | synonymous_variant | 0.26 | streptomycin | |
rpsL | 781649 | c.90T>C | synonymous_variant | 0.33 | streptomycin | |
rpsL | 781655 | c.96T>C | synonymous_variant | 0.32 | streptomycin | |
rpsL | 781658 | c.99A>G | synonymous_variant | 0.3 | streptomycin | |
rpsL | 781682 | c.123T>C | synonymous_variant | 0.31 | streptomycin | |
rpsL | 781709 | c.150G>C | synonymous_variant | 0.29 | streptomycin | Not assoc w R - Interim |
rpsL | 781715 | c.156T>C | synonymous_variant | 0.26 | streptomycin | |
rpsL | 781728 | c.169T>C | synonymous_variant | 0.25 | streptomycin | |
rpsL | 781732 | c.174_177delGAGT | frameshift_variant | 0.25 | streptomycin | Uncertain significance |
rpsL | 781739 | c.180_181insCGGC | frameshift_variant | 0.25 | streptomycin | Uncertain significance |
rpsL | 781742 | c.183C>T | synonymous_variant | 0.24 | streptomycin | |
rpsL | 781751 | c.192G>C | synonymous_variant | 0.29 | streptomycin | |
rpsL | 781760 | c.201T>C | synonymous_variant | 0.29 | streptomycin | |
rpsL | 781772 | c.213C>T | synonymous_variant | 0.28 | streptomycin | Not assoc w R - Interim |
rpsL | 781808 | c.249C>T | synonymous_variant | 0.22 | streptomycin | |
rpsL | 781814 | c.255C>T | synonymous_variant | 0.21 | streptomycin | |
rpsL | 781817 | c.258G>T | synonymous_variant | 0.2 | streptomycin | |
rpsL | 781829 | c.270G>C | synonymous_variant | 0.16 | streptomycin | |
rpsL | 781832 | c.273T>C | synonymous_variant | 0.16 | streptomycin | |
rpsL | 781907 | c.348T>C | synonymous_variant | 0.15 | streptomycin | |
rpsL | 781916 | c.357T>C | synonymous_variant | 0.15 | streptomycin | |
rpsL | 781929 | p.Gly124Ser | missense_variant | 0.14 | streptomycin | Uncertain significance |
Rv1129c | 1254562 | c.-28T>C | upstream_gene_variant | 1.0 | levofloxacin | Not assoc w R |
moxifloxacin | Not assoc w R | |||||
isoniazid | Not assoc w R | |||||
rifampicin | Not assoc w R | |||||
Rv1129c | 1254582 | c.-48A>G | upstream_gene_variant | 1.0 | levofloxacin | Uncertain significance |
moxifloxacin | Uncertain significance | |||||
isoniazid | Not assoc w R | |||||
rifampicin | Not assoc w R | |||||
fbiC | 1302899 | c.-32A>G | upstream_gene_variant | 1.0 | pretomanid | |
delamanid | Uncertain significance | |||||
clofazimine | Uncertain significance | |||||
fbiC | 1304613 | c.1683T>C | synonymous_variant | 0.27 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304634 | c.1704C>G | synonymous_variant | 0.23 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304640 | c.1710A>C | synonymous_variant | 0.25 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304646 | c.1716T>C | synonymous_variant | 0.19 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304670 | c.1740G>C | synonymous_variant | 0.18 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304671 | p.Val581Thr | missense_variant | 0.17 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304675 | p.Gly582Asp | missense_variant | 0.16 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
fbiC | 1304694 | c.1764A>G | synonymous_variant | 0.18 | pretomanid | |
delamanid | ||||||
clofazimine | ||||||
sigE | 1364736 | c.324T>C | synonymous_variant | 0.21 | pyrazinamide | Not assoc w R - Interim |
sigE | 1364742 | c.330A>G | synonymous_variant | 0.22 | pyrazinamide | |
sigE | 1364763 | c.351T>C | synonymous_variant | 0.21 | pyrazinamide | |
sigE | 1364767 | c.355A>C | synonymous_variant | 0.22 | pyrazinamide | |
sigE | 1364778 | c.366G>C | synonymous_variant | 0.27 | pyrazinamide | |
sigE | 1364781 | c.369G>C | synonymous_variant | 0.28 | pyrazinamide | |
sigE | 1364784 | c.372C>G | synonymous_variant | 0.25 | pyrazinamide | |
sigE | 1364790 | c.378T>C | synonymous_variant | 0.24 | pyrazinamide | |
sigE | 1364796 | c.384G>A | synonymous_variant | 0.22 | pyrazinamide | |
sigE | 1364799 | c.387G>C | synonymous_variant | 0.22 | pyrazinamide | |
sigE | 1364802 | c.390C>A | synonymous_variant | 0.22 | pyrazinamide | |
sigE | 1364811 | c.399A>G | synonymous_variant | 0.23 | pyrazinamide | |
sigE | 1364814 | c.402C>G | synonymous_variant | 0.23 | pyrazinamide | |
sigE | 1364820 | c.408A>G | synonymous_variant | 0.23 | pyrazinamide | |
sigE | 1364865 | c.453G>C | synonymous_variant | 0.27 | pyrazinamide | |
sigE | 1364867 | p.Ala152Gly | missense_variant | 0.27 | pyrazinamide | |
sigE | 1364871 | c.459C>T | synonymous_variant | 0.26 | pyrazinamide | |
embR | 1417554 | c.-207C>G | upstream_gene_variant | 1.0 | ethambutol | |
rrs | 1471659 | n.-187C>T | upstream_gene_variant | 1.0 | kanamycin | |
capreomycin | ||||||
streptomycin | ||||||
amikacin | ||||||
rrs | 1471986 | n.141C>T | non_coding_transcript_exon_variant | 0.41 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472019 | n.174G>A | non_coding_transcript_exon_variant | 0.41 | kanamycin | |
capreomycin | ||||||
streptomycin | ||||||
amikacin | ||||||
rrs | 1472023 | n.178G>T | non_coding_transcript_exon_variant | 0.41 | kanamycin | |
capreomycin | ||||||
streptomycin | ||||||
amikacin | ||||||
rrs | 1472031 | n.186G>C | non_coding_transcript_exon_variant | 0.42 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | ||||||
amikacin | Uncertain significance | |||||
rrs | 1472033 | n.188A>C | non_coding_transcript_exon_variant | 0.43 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | ||||||
amikacin | Uncertain significance | |||||
rrs | 1472035 | n.190G>T | non_coding_transcript_exon_variant | 0.43 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | ||||||
amikacin | Uncertain significance | |||||
rrs | 1472040 | n.195T>G | non_coding_transcript_exon_variant | 0.44 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | ||||||
amikacin | Uncertain significance | |||||
rrs | 1472041 | n.196C>T | non_coding_transcript_exon_variant | 0.43 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472042 | n.197T>G | non_coding_transcript_exon_variant | 0.43 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | ||||||
amikacin | Uncertain significance | |||||
rrs | 1472053 | n.211_212delGC | non_coding_transcript_exon_variant | 0.48 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | ||||||
amikacin | Uncertain significance | |||||
rrs | 1472061 | n.216A>T | non_coding_transcript_exon_variant | 0.47 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | ||||||
amikacin | Uncertain significance | |||||
rrs | 1472075 | n.230A>G | non_coding_transcript_exon_variant | 0.51 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | ||||||
amikacin | Uncertain significance | |||||
rrs | 1472106 | n.261G>A | non_coding_transcript_exon_variant | 0.48 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
amikacin | Not assoc w R | |||||
rrs | 1472108 | n.263C>T | non_coding_transcript_exon_variant | 0.49 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472150 | n.305T>A | non_coding_transcript_exon_variant | 0.43 | kanamycin | Uncertain significance |
capreomycin | Not assoc w R | |||||
streptomycin | Uncertain significance | |||||
amikacin | Not assoc w R | |||||
rrs | 1472251 | n.406G>A | non_coding_transcript_exon_variant | 0.29 | kanamycin | Uncertain significance |
capreomycin | Not assoc w R | |||||
streptomycin | Uncertain significance | |||||
amikacin | Not assoc w R | |||||
rrs | 1472286 | n.441C>A | non_coding_transcript_exon_variant | 0.2 | kanamycin | |
capreomycin | ||||||
streptomycin | ||||||
amikacin | ||||||
rrs | 1472287 | n.442C>T | non_coding_transcript_exon_variant | 0.2 | kanamycin | |
capreomycin | ||||||
streptomycin | ||||||
amikacin | ||||||
rrs | 1472289 | n.444T>G | non_coding_transcript_exon_variant | 0.2 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472290 | n.445C>G | non_coding_transcript_exon_variant | 0.2 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472297 | n.453_465delGTCCGGGTTCTCT | non_coding_transcript_exon_variant | 0.21 | kanamycin | |
capreomycin | ||||||
streptomycin | ||||||
amikacin | ||||||
rrs | 1472313 | n.468delGinsCA | non_coding_transcript_exon_variant | 0.18 | kanamycin | |
capreomycin | ||||||
streptomycin | ||||||
amikacin | ||||||
rrs | 1472315 | n.470T>G | non_coding_transcript_exon_variant | 0.2 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | ||||||
amikacin | Uncertain significance | |||||
rrs | 1472324 | n.479G>C | non_coding_transcript_exon_variant | 0.18 | kanamycin | |
capreomycin | ||||||
streptomycin | Uncertain significance | |||||
amikacin | ||||||
rrs | 1472325 | n.480G>C | non_coding_transcript_exon_variant | 0.18 | kanamycin | |
capreomycin | ||||||
streptomycin | Uncertain significance | |||||
amikacin | ||||||
rrs | 1472327 | n.482G>A | non_coding_transcript_exon_variant | 0.18 | kanamycin | |
capreomycin | ||||||
streptomycin | ||||||
amikacin | ||||||
rrs | 1472328 | n.483G>T | non_coding_transcript_exon_variant | 0.19 | kanamycin | |
capreomycin | ||||||
streptomycin | ||||||
amikacin | ||||||
rrs | 1472337 | n.492C>G | non_coding_transcript_exon_variant | 0.26 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | ||||||
amikacin | Uncertain significance | |||||
rrs | 1472380 | n.535G>C | non_coding_transcript_exon_variant | 0.35 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472446 | n.601T>A | non_coding_transcript_exon_variant | 0.4 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | ||||||
amikacin | Uncertain significance | |||||
rrs | 1472452 | n.607G>A | non_coding_transcript_exon_variant | 0.41 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | ||||||
amikacin | Uncertain significance | |||||
rrs | 1472464 | n.619A>G | non_coding_transcript_exon_variant | 0.45 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472846 | n.1001C>A | non_coding_transcript_exon_variant | 0.33 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472847 | n.1002G>C | non_coding_transcript_exon_variant | 0.33 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | ||||||
amikacin | Uncertain significance | |||||
rrs | 1472849 | n.1004C>G | non_coding_transcript_exon_variant | 0.33 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | ||||||
amikacin | Uncertain significance | |||||
rrs | 1472850 | n.1005T>C | non_coding_transcript_exon_variant | 0.33 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472857 | n.1012A>G | non_coding_transcript_exon_variant | 0.36 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472858 | n.1013G>T | non_coding_transcript_exon_variant | 0.36 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472860 | n.1015C>G | non_coding_transcript_exon_variant | 0.36 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | ||||||
amikacin | Uncertain significance | |||||
rrs | 1472861 | n.1016G>T | non_coding_transcript_exon_variant | 0.37 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1472973 | n.1128A>T | non_coding_transcript_exon_variant | 0.5 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | ||||||
amikacin | Uncertain significance | |||||
rrs | 1473104 | n.1259C>T | non_coding_transcript_exon_variant | 0.44 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1473110 | n.1265T>G | non_coding_transcript_exon_variant | 0.42 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1473111 | n.1266A>G | non_coding_transcript_exon_variant | 0.42 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1473123 | n.1278delAinsTC | non_coding_transcript_exon_variant | 0.38 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | ||||||
amikacin | Uncertain significance | |||||
rrs | 1473276 | n.1431A>G | non_coding_transcript_exon_variant | 0.34 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrs | 1473290 | n.1445C>T | non_coding_transcript_exon_variant | 0.28 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | ||||||
amikacin | Uncertain significance | |||||
rrs | 1473291 | n.1446_1447insT | non_coding_transcript_exon_variant | 0.31 | kanamycin | |
capreomycin | ||||||
streptomycin | ||||||
amikacin | ||||||
rrs | 1473301 | n.1456T>C | non_coding_transcript_exon_variant | 0.3 | kanamycin | Uncertain significance |
capreomycin | Uncertain significance | |||||
streptomycin | Uncertain significance | |||||
amikacin | Uncertain significance | |||||
rrl | 1473876 | n.219G>A | non_coding_transcript_exon_variant | 0.17 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1473899 | n.242A>G | non_coding_transcript_exon_variant | 0.17 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474053 | n.396G>A | non_coding_transcript_exon_variant | 0.2 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1474054 | n.397T>C | non_coding_transcript_exon_variant | 0.2 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1474135 | n.478G>A | non_coding_transcript_exon_variant | 0.3 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474140 | n.483C>T | non_coding_transcript_exon_variant | 0.31 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474151 | n.494C>T | non_coding_transcript_exon_variant | 0.32 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474174 | n.517A>G | non_coding_transcript_exon_variant | 0.33 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474181 | n.524C>T | non_coding_transcript_exon_variant | 0.33 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1474183 | n.526T>C | non_coding_transcript_exon_variant | 0.33 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474185 | n.528G>A | non_coding_transcript_exon_variant | 0.33 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1474186 | n.529A>G | non_coding_transcript_exon_variant | 0.33 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474249 | n.592G>T | non_coding_transcript_exon_variant | 0.31 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474266 | n.609T>C | non_coding_transcript_exon_variant | 0.28 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474269 | n.612C>T | non_coding_transcript_exon_variant | 0.28 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474288 | n.631_632delCCinsTCGACT | non_coding_transcript_exon_variant | 0.27 | capreomycin | |
linezolid | ||||||
rrl | 1474292 | n.635T>G | non_coding_transcript_exon_variant | 0.25 | capreomycin | |
linezolid | ||||||
rrl | 1474294 | n.638_649delCTCTCCGGAGGA | non_coding_transcript_exon_variant | 0.27 | capreomycin | |
linezolid | ||||||
rrl | 1474308 | n.651G>T | non_coding_transcript_exon_variant | 0.25 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474310 | n.653T>G | non_coding_transcript_exon_variant | 0.24 | capreomycin | |
linezolid | ||||||
rrl | 1474362 | n.705A>G | non_coding_transcript_exon_variant | 0.3 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474413 | n.756_757delACinsTAT | non_coding_transcript_exon_variant | 0.16 | capreomycin | |
linezolid | ||||||
rrl | 1474446 | n.789C>T | non_coding_transcript_exon_variant | 0.22 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474626 | n.969T>C | non_coding_transcript_exon_variant | 0.27 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474627 | n.970G>A | non_coding_transcript_exon_variant | 0.25 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474629 | n.972G>A | non_coding_transcript_exon_variant | 0.25 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1474632 | n.975G>T | non_coding_transcript_exon_variant | 0.24 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474636 | n.979A>T | non_coding_transcript_exon_variant | 0.25 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1474637 | n.980C>T | non_coding_transcript_exon_variant | 0.25 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1474638 | n.981C>G | non_coding_transcript_exon_variant | 0.24 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474639 | n.982G>T | non_coding_transcript_exon_variant | 0.24 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1474640 | n.983C>T | non_coding_transcript_exon_variant | 0.26 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1474673 | n.1016T>C | non_coding_transcript_exon_variant | 0.27 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474676 | n.1019T>A | non_coding_transcript_exon_variant | 0.27 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474677 | n.1020A>G | non_coding_transcript_exon_variant | 0.29 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474710 | n.1053T>A | non_coding_transcript_exon_variant | 0.26 | capreomycin | |
linezolid | ||||||
rrl | 1474711 | n.1054G>C | non_coding_transcript_exon_variant | 0.25 | capreomycin | |
linezolid | ||||||
rrl | 1474712 | n.1055G>A | non_coding_transcript_exon_variant | 0.23 | capreomycin | |
linezolid | ||||||
rrl | 1474713 | n.1056T>A | non_coding_transcript_exon_variant | 0.24 | capreomycin | |
linezolid | ||||||
rrl | 1474716 | n.1059_1063delAAAGCinsCCAAGAGT | non_coding_transcript_exon_variant | 0.25 | capreomycin | |
linezolid | ||||||
rrl | 1474753 | n.1096A>G | non_coding_transcript_exon_variant | 0.27 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1474760 | n.1103A>G | non_coding_transcript_exon_variant | 0.29 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474794 | n.1137C>T | non_coding_transcript_exon_variant | 0.28 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474803 | n.1146G>A | non_coding_transcript_exon_variant | 0.3 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474812 | n.1155G>A | non_coding_transcript_exon_variant | 0.29 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474830 | n.1173A>G | non_coding_transcript_exon_variant | 0.28 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1474932 | n.1275C>T | non_coding_transcript_exon_variant | 0.24 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475120 | n.1463G>T | non_coding_transcript_exon_variant | 0.35 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475419 | n.1762C>T | non_coding_transcript_exon_variant | 0.15 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475429 | n.1772G>T | non_coding_transcript_exon_variant | 0.16 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475452 | n.1795C>A | non_coding_transcript_exon_variant | 0.18 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475479 | n.1822C>G | non_coding_transcript_exon_variant | 0.2 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475483 | n.1826C>T | non_coding_transcript_exon_variant | 0.2 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475505 | n.1848G>A | non_coding_transcript_exon_variant | 0.33 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475526 | n.1869C>A | non_coding_transcript_exon_variant | 0.38 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475531 | n.1874C>T | non_coding_transcript_exon_variant | 0.4 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475544 | n.1887A>T | non_coding_transcript_exon_variant | 0.41 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475545 | n.1888T>G | non_coding_transcript_exon_variant | 0.42 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475602 | n.1945G>C | non_coding_transcript_exon_variant | 0.38 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475603 | n.1946G>C | non_coding_transcript_exon_variant | 0.37 | capreomycin | |
linezolid | ||||||
rrl | 1475604 | n.1947A>C | non_coding_transcript_exon_variant | 0.37 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475612 | n.1955G>T | non_coding_transcript_exon_variant | 0.23 | capreomycin | |
linezolid | ||||||
rrl | 1475615 | n.1958C>G | non_coding_transcript_exon_variant | 0.38 | capreomycin | |
linezolid | ||||||
rrl | 1475616 | n.1959A>G | non_coding_transcript_exon_variant | 0.39 | capreomycin | |
linezolid | ||||||
rrl | 1475618 | n.1961C>T | non_coding_transcript_exon_variant | 0.4 | capreomycin | |
linezolid | ||||||
rrl | 1475626 | n.1969delTinsCC | non_coding_transcript_exon_variant | 0.41 | capreomycin | |
linezolid | ||||||
rrl | 1475629 | n.1972G>C | non_coding_transcript_exon_variant | 0.39 | capreomycin | |
linezolid | ||||||
rrl | 1475637 | n.1980T>G | non_coding_transcript_exon_variant | 0.38 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475638 | n.1981C>G | non_coding_transcript_exon_variant | 0.38 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475639 | n.1982C>G | non_coding_transcript_exon_variant | 0.38 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475643 | n.1986C>G | non_coding_transcript_exon_variant | 0.37 | capreomycin | |
linezolid | ||||||
rrl | 1475647 | n.1990G>C | non_coding_transcript_exon_variant | 0.4 | capreomycin | |
linezolid | ||||||
rrl | 1475659 | n.2002G>A | non_coding_transcript_exon_variant | 0.42 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1475753 | n.2096C>T | non_coding_transcript_exon_variant | 0.37 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475762 | n.2105G>T | non_coding_transcript_exon_variant | 0.35 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475763 | n.2106C>T | non_coding_transcript_exon_variant | 0.35 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475764 | n.2107A>C | non_coding_transcript_exon_variant | 0.35 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475765 | n.2108A>G | non_coding_transcript_exon_variant | 0.34 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475775 | n.2118G>A | non_coding_transcript_exon_variant | 0.39 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475988 | n.2331A>G | non_coding_transcript_exon_variant | 0.5 | capreomycin | Not assoc w R |
linezolid | Uncertain significance | |||||
rrl | 1475991 | n.2334T>C | non_coding_transcript_exon_variant | 0.47 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1475995 | n.2338G>A | non_coding_transcript_exon_variant | 0.47 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476030 | n.2373A>G | non_coding_transcript_exon_variant | 0.45 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476032 | n.2375C>A | non_coding_transcript_exon_variant | 0.44 | capreomycin | |
linezolid | ||||||
rrl | 1476033 | n.2376T>G | non_coding_transcript_exon_variant | 0.44 | capreomycin | |
linezolid | ||||||
rrl | 1476035 | n.2378G>C | non_coding_transcript_exon_variant | 0.43 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476044 | n.2387T>G | non_coding_transcript_exon_variant | 0.43 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476046 | n.2389G>T | non_coding_transcript_exon_variant | 0.43 | capreomycin | |
linezolid | ||||||
rrl | 1476047 | n.2390G>T | non_coding_transcript_exon_variant | 0.43 | capreomycin | |
linezolid | ||||||
rrl | 1476049 | n.2392C>T | non_coding_transcript_exon_variant | 0.43 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476088 | n.2431A>C | non_coding_transcript_exon_variant | 0.45 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476099 | n.2442A>G | non_coding_transcript_exon_variant | 0.43 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476103 | n.2446C>G | non_coding_transcript_exon_variant | 0.42 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476105 | n.2448G>A | non_coding_transcript_exon_variant | 0.41 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476106 | n.2449A>T | non_coding_transcript_exon_variant | 0.41 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476110 | n.2453G>C | non_coding_transcript_exon_variant | 0.43 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476115 | n.2458T>C | non_coding_transcript_exon_variant | 0.41 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476131 | n.2474C>T | non_coding_transcript_exon_variant | 0.37 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476160 | n.2503T>C | non_coding_transcript_exon_variant | 0.43 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476214 | n.2557G>T | non_coding_transcript_exon_variant | 0.45 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476215 | n.2558C>T | non_coding_transcript_exon_variant | 0.45 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476224 | n.2567A>G | non_coding_transcript_exon_variant | 0.45 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476251 | n.2594T>G | non_coding_transcript_exon_variant | 0.47 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476256 | n.2599A>T | non_coding_transcript_exon_variant | 0.48 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476260 | n.2603A>G | non_coding_transcript_exon_variant | 0.48 | capreomycin | Not assoc w R |
linezolid | Uncertain significance | |||||
rrl | 1476281 | n.2624T>C | non_coding_transcript_exon_variant | 0.49 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476297 | n.2640C>T | non_coding_transcript_exon_variant | 0.46 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476299 | n.2642C>T | non_coding_transcript_exon_variant | 0.46 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476384 | n.2727G>A | non_coding_transcript_exon_variant | 0.33 | capreomycin | |
linezolid | ||||||
rrl | 1476529 | n.2872A>G | non_coding_transcript_exon_variant | 0.66 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476540 | n.2883C>T | non_coding_transcript_exon_variant | 0.65 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476583 | n.2926G>A | non_coding_transcript_exon_variant | 0.55 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476584 | n.2927C>T | non_coding_transcript_exon_variant | 0.54 | capreomycin | Not assoc w R |
linezolid | Uncertain significance | |||||
rrl | 1476594 | n.2937C>T | non_coding_transcript_exon_variant | 0.51 | capreomycin | Not assoc w R |
linezolid | Uncertain significance | |||||
rrl | 1476597 | n.2940G>A | non_coding_transcript_exon_variant | 0.53 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476603 | n.2946G>A | non_coding_transcript_exon_variant | 0.53 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476628 | n.2971T>A | non_coding_transcript_exon_variant | 0.47 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476664 | n.3007T>C | non_coding_transcript_exon_variant | 0.45 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476665 | n.3008T>C | non_coding_transcript_exon_variant | 0.44 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476674 | n.3017T>C | non_coding_transcript_exon_variant | 0.43 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476679 | n.3022T>C | non_coding_transcript_exon_variant | 0.41 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476689 | n.3032A>T | non_coding_transcript_exon_variant | 0.42 | capreomycin | |
linezolid | ||||||
rrl | 1476690 | n.3033C>T | non_coding_transcript_exon_variant | 0.39 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476693 | n.3036G>A | non_coding_transcript_exon_variant | 0.39 | capreomycin | |
linezolid | ||||||
rrl | 1476695 | n.3038T>A | non_coding_transcript_exon_variant | 0.39 | capreomycin | |
linezolid | ||||||
rrl | 1476716 | n.3059A>C | non_coding_transcript_exon_variant | 0.39 | capreomycin | Uncertain significance |
linezolid | ||||||
rrl | 1476723 | n.3066T>A | non_coding_transcript_exon_variant | 0.36 | capreomycin | |
linezolid | ||||||
rrl | 1476725 | n.3068C>T | non_coding_transcript_exon_variant | 0.31 | capreomycin | Uncertain significance |
linezolid | Uncertain significance | |||||
rrl | 1476726 | n.3069A>G | non_coding_transcript_exon_variant | 0.31 | capreomycin | |
linezolid | ||||||
rrl | 1476731 | n.3074G>A | non_coding_transcript_exon_variant | 0.33 | capreomycin | |
linezolid | ||||||
rrl | 1476732 | n.3075T>C | non_coding_transcript_exon_variant | 0.33 | capreomycin | |
linezolid | ||||||
rrl | 1476759 | n.3102T>C | non_coding_transcript_exon_variant | 0.29 | capreomycin | |
linezolid | ||||||
rpsA | 1833694 | c.153G>C | synonymous_variant | 0.16 | pyrazinamide | |
rpsA | 1833697 | c.156C>G | synonymous_variant | 0.16 | pyrazinamide | |
rpsA | 1833703 | c.162C>T | synonymous_variant | 0.15 | pyrazinamide | Not assoc w R - Interim |
rpsA | 1833811 | c.270G>T | synonymous_variant | 0.16 | pyrazinamide | |
rpsA | 1833829 | c.288A>G | synonymous_variant | 0.19 | pyrazinamide | |
rpsA | 1833832 | c.291G>A | synonymous_variant | 0.21 | pyrazinamide | |
rpsA | 1833838 | c.297G>C | synonymous_variant | 0.21 | pyrazinamide | |
rpsA | 1833841 | c.300C>G | synonymous_variant | 0.21 | pyrazinamide | |
rpsA | 1833847 | c.306C>G | synonymous_variant | 0.2 | pyrazinamide | |
rpsA | 1833856 | c.315A>G | synonymous_variant | 0.2 | pyrazinamide | |
rpsA | 1833862 | c.321G>T | synonymous_variant | 0.2 | pyrazinamide | |
rpsA | 1833894 | p.Ala118Glu | missense_variant | 0.22 | pyrazinamide | |
rpsA | 1833904 | c.363G>A | synonymous_variant | 0.22 | pyrazinamide | |
rpsA | 1833928 | c.387G>C | synonymous_variant | 0.23 | pyrazinamide | |
rpsA | 1833949 | c.408T>C | synonymous_variant | 0.2 | pyrazinamide | |
rpsA | 1833970 | c.429G>T | synonymous_variant | 0.21 | pyrazinamide | |
rpsA | 1833976 | c.435C>T | synonymous_variant | 0.2 | pyrazinamide | |
rpsA | 1833979 | c.438T>C | synonymous_variant | 0.2 | pyrazinamide | |
rpsA | 1833991 | c.450C>A | synonymous_variant | 0.18 | pyrazinamide | |
rpsA | 1834000 | c.459G>C | synonymous_variant | 0.17 | pyrazinamide | |
rpsA | 1834009 | c.468C>T | synonymous_variant | 0.17 | pyrazinamide | |
rpsA | 1834030 | c.489C>G | synonymous_variant | 0.17 | pyrazinamide | |
rpsA | 1834078 | c.537C>T | synonymous_variant | 0.16 | pyrazinamide | |
rpsA | 1834169 | p.Thr210Ala | missense_variant | 0.22 | pyrazinamide | Uncertain significance |
rpsA | 1834189 | c.648G>C | synonymous_variant | 0.3 | pyrazinamide | |
rpsA | 1834213 | c.672G>C | synonymous_variant | 0.3 | pyrazinamide | |
rpsA | 1834234 | c.693G>C | synonymous_variant | 0.26 | pyrazinamide | |
rpsA | 1834240 | c.699T>C | synonymous_variant | 0.23 | pyrazinamide | |
rpsA | 1834246 | c.705G>C | synonymous_variant | 0.21 | pyrazinamide | |
rpsA | 1834249 | c.708T>C | synonymous_variant | 0.23 | pyrazinamide | |
rpsA | 1834252 | c.711C>G | synonymous_variant | 0.22 | pyrazinamide | |
rpsA | 1834279 | c.738C>T | synonymous_variant | 0.2 | pyrazinamide | Not assoc w R - Interim |
rpsA | 1834345 | c.804C>T | synonymous_variant | 0.21 | pyrazinamide | |
rpsA | 1834348 | c.807T>C | synonymous_variant | 0.21 | pyrazinamide | Not assoc w R - Interim |
rpsA | 1834361 | c.820T>C | synonymous_variant | 0.23 | pyrazinamide | |
rpsA | 1834366 | c.825A>G | synonymous_variant | 0.23 | pyrazinamide | Not assoc w R - Interim |
rpsA | 1834396 | c.855G>C | synonymous_variant | 0.23 | pyrazinamide | |
rpsA | 1834411 | c.870T>C | synonymous_variant | 0.26 | pyrazinamide | |
rpsA | 1834423 | c.882G>T | synonymous_variant | 0.28 | pyrazinamide | |
rpsA | 1834451 | c.910T>C | synonymous_variant | 0.27 | pyrazinamide | |
rpsA | 1834456 | c.915T>G | synonymous_variant | 0.26 | pyrazinamide | |
rpsA | 1834468 | c.927A>G | synonymous_variant | 0.22 | pyrazinamide | |
rpsA | 1834489 | c.948T>C | synonymous_variant | 0.3 | pyrazinamide | |
rpsA | 1834498 | c.957C>T | synonymous_variant | 0.31 | pyrazinamide | |
rpsA | 1834513 | c.972C>G | synonymous_variant | 0.33 | pyrazinamide | |
rpsA | 1834520 | p.Ala327Ser | missense_variant | 0.28 | pyrazinamide | |
rpsA | 1834528 | c.987T>C | synonymous_variant | 0.28 | pyrazinamide | |
rpsA | 1834540 | c.999G>C | synonymous_variant | 0.26 | pyrazinamide | |
rpsA | 1834543 | c.1002C>G | synonymous_variant | 0.26 | pyrazinamide | |
rpsA | 1834546 | c.1005T>C | synonymous_variant | 0.25 | pyrazinamide | |
rpsA | 1834554 | c.1014_1015delTG | frameshift_variant | 0.25 | pyrazinamide | Uncertain significance |
rpsA | 1834558 | c.1017_1018insAG | frameshift_variant | 0.24 | pyrazinamide | Uncertain significance |
rpsA | 1834606 | c.1065C>T | synonymous_variant | 0.25 | pyrazinamide | |
rpsA | 1834609 | c.1068T>C | synonymous_variant | 0.25 | pyrazinamide | |
rpsA | 1834619 | c.1078T>C | synonymous_variant | 0.24 | pyrazinamide | |
rpsA | 1834622 | c.1081_1083delTCGinsAGC | synonymous_variant | 0.23 | pyrazinamide | |
rpsA | 1834633 | c.1092A>G | synonymous_variant | 0.21 | pyrazinamide | |
rpsA | 1834639 | c.1098T>C | synonymous_variant | 0.23 | pyrazinamide | |
rpsA | 1834732 | c.1191T>C | synonymous_variant | 0.27 | pyrazinamide | |
rpsA | 1834738 | c.1197A>G | synonymous_variant | 0.23 | pyrazinamide | |
rpsA | 1834753 | c.1212T>C | synonymous_variant | 0.21 | pyrazinamide | |
rpsA | 1834756 | c.1215G>A | synonymous_variant | 0.21 | pyrazinamide | |
rpsA | 1834859 | p.Ala440Thr | missense_variant | 0.94 | pyrazinamide | Uncertain significance |
tsnR | 1854300 | p.Leu232Pro | missense_variant | 1.0 | linezolid | Not assoc w R |
tlyA | 1917972 | c.33A>G | synonymous_variant | 1.0 | capreomycin | Not assoc w R |
bacA | 2062922 | p.Ile603Val | missense_variant | 1.0 | kanamycin | Not assoc w R |
capreomycin | Not assoc w R | |||||
streptomycin | Not assoc w R | |||||
amikacin | Not assoc w R | |||||
ndh | 2103173 | c.-132delG | upstream_gene_variant | 1.0 | isoniazid | |
delamanid | ||||||
ethionamide | ||||||
katG | 2154724 | p.Arg463Leu | missense_variant | 1.0 | isoniazid | Not assoc w R |
katG | 2155503 | c.609C>T | synonymous_variant | 1.0 | isoniazid | Not assoc w R |
katG | 2156025 | c.87C>A | synonymous_variant | 1.0 | isoniazid | Not assoc w R |
PPE35 | 2167926 | p.Leu896Ser | missense_variant | 1.0 | pyrazinamide | Not assoc w R |
PPE35 | 2168011 | p.Ser868Arg | missense_variant | 1.0 | pyrazinamide | Uncertain significance |
PPE35 | 2168319 | p.Thr765Ile | missense_variant | 1.0 | pyrazinamide | Uncertain significance |
PPE35 | 2168814 | c.1798dupA | frameshift_variant | 1.0 | pyrazinamide | Uncertain significance |
PPE35 | 2169407 | c.1206C>T | synonymous_variant | 1.0 | pyrazinamide | |
Rv1979c | 2222308 | p.Asp286Gly | missense_variant | 1.0 | bedaquiline | Not assoc w R - Interim |
clofazimine | Not assoc w R | |||||
Rv1979c | 2223293 | c.-129A>G | upstream_gene_variant | 1.0 | bedaquiline | Not assoc w R - Interim |
clofazimine | Not assoc w R | |||||
kasA | 2518132 | c.18C>T | synonymous_variant | 1.0 | isoniazid | |
eis | 2715125 | p.Thr70Ala | missense_variant | 1.0 | kanamycin | Uncertain significance |
amikacin | Uncertain significance | |||||
folC | 2746572 | p.Arg343Cys | missense_variant | 1.0 | para-aminosalicylic_acid | |
Rv2477c | 2782927 | c.1116A>G | synonymous_variant | 1.0 | kanamycin | Not assoc w R - Interim |
levofloxacin | Not assoc w R - Interim | |||||
moxifloxacin | Not assoc w R - Interim | |||||
streptomycin | Not assoc w R | |||||
rifampicin | Not assoc w R | |||||
ethambutol | Not assoc w R | |||||
amikacin | Not assoc w R - Interim | |||||
Rv2680 | 2995832 | c.-273G>A | upstream_gene_variant | 1.0 | capreomycin | |
Rv2681 | 2997325 | p.Ala196Val | missense_variant | 1.0 | capreomycin | Uncertain significance |
thyA | 3073953 | c.519T>C | synonymous_variant | 0.2 | para-aminosalicylic_acid | |
ald | 3086728 | c.-92C>T | upstream_gene_variant | 1.0 | cycloserine | |
ald | 3086788 | c.-32T>C | upstream_gene_variant | 1.0 | cycloserine | |
ald | 3087084 | c.266delA | frameshift_variant | 1.0 | cycloserine | |
Rv3083 | 3448783 | p.Val94Ile | missense_variant | 1.0 | ethionamide | Uncertain significance |
lpqB | 3623372 | c.1539G>C | synonymous_variant | 1.0 | rifampicin | Not assoc w R |
bedaquiline | Not assoc w R - Interim | |||||
lpqB | 3623730 | p.Ser394Leu | missense_variant | 1.0 | rifampicin | Not assoc w R |
bedaquiline | Uncertain significance | |||||
lpqB | 3624350 | c.561G>T | synonymous_variant | 1.0 | rifampicin | Not assoc w R |
bedaquiline | Not assoc w R - Interim | |||||
lpqB | 3624486 | p.Asp142Gly | missense_variant | 1.0 | rifampicin | Not assoc w R |
bedaquiline | Uncertain significance | |||||
lpqB | 3624593 | c.318G>A | synonymous_variant | 1.0 | rifampicin | Not assoc w R |
bedaquiline | Not assoc w R - Interim | |||||
lpqB | 3624710 | c.201G>A | synonymous_variant | 1.0 | rifampicin | Not assoc w R |
bedaquiline | Not assoc w R - Interim | |||||
mtrB | 3625065 | p.Met517Leu | missense_variant | 1.0 | rifampicin | Not assoc w R |
bedaquiline | Uncertain significance | |||||
fbiB | 3641590 | p.Gly19Glu | missense_variant | 1.0 | pretomanid | |
delamanid | Uncertain significance | |||||
clofazimine | ||||||
rpoA | 3877695 | c.813C>G | synonymous_variant | 0.18 | rifampicin | Not assoc w R - Interim |
rpoA | 3877704 | c.804G>T | synonymous_variant | 0.22 | rifampicin | Not assoc w R - Interim |
rpoA | 3877728 | c.780C>G | synonymous_variant | 0.27 | rifampicin | |
rpoA | 3877731 | c.777G>T | synonymous_variant | 0.28 | rifampicin | |
rpoA | 3877734 | c.774G>C | synonymous_variant | 0.32 | rifampicin | |
rpoA | 3877737 | c.771G>C | synonymous_variant | 0.33 | rifampicin | |
rpoA | 3877743 | c.765T>C | synonymous_variant | 0.33 | rifampicin | Not assoc w R - Interim |
rpoA | 3877749 | c.759C>T | synonymous_variant | 0.33 | rifampicin | Not assoc w R - Interim |
rpoA | 3877764 | c.744C>G | synonymous_variant | 0.32 | rifampicin | Not assoc w R - Interim |
rpoA | 3877770 | c.735_738delGTCAinsCAGC | synonymous_variant | 0.33 | rifampicin | |
rpoA | 3877776 | c.732T>C | synonymous_variant | 0.3 | rifampicin | Not assoc w R - Interim |
rpoA | 3877782 | c.726T>C | synonymous_variant | 0.29 | rifampicin | Not assoc w R - Interim |
rpoA | 3877785 | c.723C>A | synonymous_variant | 0.3 | rifampicin | |
rpoA | 3877818 | c.690A>G | synonymous_variant | 0.33 | rifampicin | Not assoc w R - Interim |
rpoA | 3877848 | c.660C>T | synonymous_variant | 0.33 | rifampicin | Not assoc w R - Interim |
rpoA | 3877856 | c.652T>C | synonymous_variant | 0.3 | rifampicin | Not assoc w R - Interim |
rpoA | 3877857 | c.651G>A | synonymous_variant | 0.3 | rifampicin | |
rpoA | 3877866 | c.642G>C | synonymous_variant | 0.35 | rifampicin | |
rpoA | 3877875 | c.633T>A | synonymous_variant | 0.31 | rifampicin | |
rpoA | 3877878 | c.630G>C | synonymous_variant | 0.31 | rifampicin | |
rpoA | 3877887 | c.621G>C | synonymous_variant | 0.31 | rifampicin | |
rpoA | 3877893 | c.615C>T | synonymous_variant | 0.34 | rifampicin | Not assoc w R - Interim |
rpoA | 3877905 | c.603A>G | synonymous_variant | 0.32 | rifampicin | Not assoc w R - Interim |
rpoA | 3877908 | c.600T>C | synonymous_variant | 0.32 | rifampicin | Not assoc w R - Interim |
rpoA | 3877920 | c.588G>C | synonymous_variant | 0.34 | rifampicin | Not assoc w R - Interim |
rpoA | 3877926 | c.582G>C | synonymous_variant | 0.33 | rifampicin | |
rpoA | 3877962 | c.546G>T | synonymous_variant | 0.34 | rifampicin | Not assoc w R - Interim |
rpoA | 3877971 | p.Asp179Glu | missense_variant | 0.35 | rifampicin | Uncertain significance |
rpoA | 3877986 | c.522G>C | synonymous_variant | 0.31 | rifampicin | |
rpoA | 3877989 | c.519A>G | synonymous_variant | 0.31 | rifampicin | Not assoc w R - Interim |
rpoA | 3877995 | c.513G>C | synonymous_variant | 0.3 | rifampicin | |
rpoA | 3878001 | c.507A>G | synonymous_variant | 0.27 | rifampicin | Not assoc w R - Interim |
rpoA | 3878019 | c.489A>G | synonymous_variant | 0.26 | rifampicin | |
rpoA | 3878025 | c.483C>T | synonymous_variant | 0.25 | rifampicin | |
rpoA | 3878028 | c.480G>C | synonymous_variant | 0.24 | rifampicin | |
rpoA | 3878031 | c.477T>C | synonymous_variant | 0.25 | rifampicin | |
rpoA | 3878034 | c.474A>G | synonymous_variant | 0.25 | rifampicin | |
rpoA | 3878040 | c.468T>C | synonymous_variant | 0.26 | rifampicin | Not assoc w R - Interim |
rpoA | 3878046 | c.462T>G | synonymous_variant | 0.22 | rifampicin | |
rpoA | 3878050 | p.Arg153Lys | missense_variant | 0.22 | rifampicin | |
rpoA | 3878055 | c.453A>G | synonymous_variant | 0.23 | rifampicin | |
rpoA | 3878061 | c.447G>A | synonymous_variant | 0.24 | rifampicin | |
rpoA | 3878070 | c.438T>C | synonymous_variant | 0.25 | rifampicin | |
rpoA | 3878082 | c.426T>C | synonymous_variant | 0.3 | rifampicin | |
rpoA | 3878103 | c.405A>G | synonymous_variant | 0.28 | rifampicin | |
rpoA | 3878118 | c.390T>C | synonymous_variant | 0.29 | rifampicin | |
rpoA | 3878127 | c.381G>C | synonymous_variant | 0.34 | rifampicin | |
rpoA | 3878143 | p.Gly122Asp | missense_variant | 0.33 | rifampicin | Uncertain significance |
rpoA | 3878145 | c.363C>G | synonymous_variant | 0.33 | rifampicin | |
rpoA | 3878160 | c.348C>G | synonymous_variant | 0.35 | rifampicin | Not assoc w R - Interim |
rpoA | 3878163 | c.345C>T | synonymous_variant | 0.37 | rifampicin | Not assoc w R - Interim |
rpoA | 3878187 | c.321C>A | synonymous_variant | 0.36 | rifampicin | |
rpoA | 3878193 | c.315T>C | synonymous_variant | 0.35 | rifampicin | Not assoc w R - Interim |
rpoA | 3878197 | p.Glu104Ala | missense_variant | 0.37 | rifampicin | Uncertain significance |
rpoA | 3878205 | c.303T>C | synonymous_variant | 0.38 | rifampicin | Not assoc w R - Interim |
rpoA | 3878217 | c.291A>G | synonymous_variant | 0.41 | rifampicin | Not assoc w R - Interim |
rpoA | 3878238 | c.270C>T | synonymous_variant | 0.39 | rifampicin | |
rpoA | 3878244 | c.264G>A | synonymous_variant | 0.44 | rifampicin | |
rpoA | 3878247 | c.261G>C | synonymous_variant | 0.44 | rifampicin | |
rpoA | 3878256 | c.252G>C | synonymous_variant | 0.45 | rifampicin | |
rpoA | 3878264 | p.Ser82Gly | missense_variant | 0.47 | rifampicin | |
rpoA | 3878271 | c.237T>C | synonymous_variant | 0.47 | rifampicin | Not assoc w R - Interim |
rpoA | 3878283 | p.Glu75Asp | missense_variant | 0.48 | rifampicin | Uncertain significance |
rpoA | 3878292 | c.216T>C | synonymous_variant | 0.5 | rifampicin | Not assoc w R - Interim |
rpoA | 3878298 | c.210A>G | synonymous_variant | 0.38 | rifampicin | Not assoc w R - Interim |
rpoA | 3878301 | c.207C>G | synonymous_variant | 0.38 | rifampicin | Not assoc w R - Interim |
rpoA | 3878304 | c.204G>A | synonymous_variant | 0.36 | rifampicin | |
rpoA | 3878310 | c.198G>C | synonymous_variant | 0.33 | rifampicin | |
rpoA | 3878313 | c.195G>C | synonymous_variant | 0.33 | rifampicin | Not assoc w R - Interim |
rpoA | 3878322 | c.186A>G | synonymous_variant | 0.32 | rifampicin | Not assoc w R - Interim |
rpoA | 3878331 | c.177A>G | synonymous_variant | 0.25 | rifampicin | Not assoc w R - Interim |
rpoA | 3878337 | c.171T>C | synonymous_variant | 0.26 | rifampicin | Not assoc w R - Interim |
rpoA | 3878346 | c.162T>C | synonymous_variant | 0.26 | rifampicin | |
rpoA | 3878352 | c.156C>G | synonymous_variant | 0.24 | rifampicin | |
rpoA | 3878400 | c.108T>C | synonymous_variant | 0.23 | rifampicin | Not assoc w R - Interim |
rpoA | 3878403 | c.105C>T | synonymous_variant | 0.22 | rifampicin | |
rpoA | 3878409 | c.99C>G | synonymous_variant | 0.22 | rifampicin | |
clpC1 | 4038403 | c.2302T>C | synonymous_variant | 1.0 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4038623 | c.2082A>G | synonymous_variant | 0.23 | pyrazinamide | |
clpC1 | 4038640 | p.Asp689Asn | missense_variant | 0.25 | pyrazinamide | |
clpC1 | 4038647 | c.2058T>G | synonymous_variant | 0.27 | pyrazinamide | |
clpC1 | 4038658 | p.Lys683Gln | missense_variant | 0.23 | pyrazinamide | |
clpC1 | 4038660 | c.2044_2045delTCinsAG | synonymous_variant | 0.23 | pyrazinamide | |
clpC1 | 4038662 | c.2043T>C | synonymous_variant | 0.23 | pyrazinamide | |
clpC1 | 4038671 | c.2034T>G | synonymous_variant | 0.2 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4038679 | p.Pro676Ala | missense_variant | 0.24 | pyrazinamide | |
clpC1 | 4038683 | c.2022T>C | synonymous_variant | 0.24 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4038695 | c.2010C>G | synonymous_variant | 0.32 | pyrazinamide | |
clpC1 | 4038704 | c.2001T>C | synonymous_variant | 0.29 | pyrazinamide | |
clpC1 | 4038710 | c.1995G>C | synonymous_variant | 0.29 | pyrazinamide | |
clpC1 | 4038713 | c.1992T>C | synonymous_variant | 0.29 | pyrazinamide | |
clpC1 | 4038725 | c.1980C>G | synonymous_variant | 0.33 | pyrazinamide | |
clpC1 | 4038740 | c.1965G>C | synonymous_variant | 0.33 | pyrazinamide | |
clpC1 | 4038755 | c.1950G>C | synonymous_variant | 0.33 | pyrazinamide | |
clpC1 | 4038767 | c.1938G>T | synonymous_variant | 0.32 | pyrazinamide | |
clpC1 | 4038770 | c.1935C>T | synonymous_variant | 0.32 | pyrazinamide | |
clpC1 | 4038773 | c.1932T>C | synonymous_variant | 0.31 | pyrazinamide | |
clpC1 | 4038776 | c.1929G>A | synonymous_variant | 0.3 | pyrazinamide | |
clpC1 | 4038779 | c.1926C>G | synonymous_variant | 0.3 | pyrazinamide | |
clpC1 | 4038782 | c.1923G>C | synonymous_variant | 0.3 | pyrazinamide | |
clpC1 | 4038790 | c.1915C>T | synonymous_variant | 0.3 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4038812 | c.1893T>C | synonymous_variant | 0.33 | pyrazinamide | |
clpC1 | 4038815 | c.1890G>C | synonymous_variant | 0.33 | pyrazinamide | |
clpC1 | 4038842 | c.1863G>C | synonymous_variant | 0.3 | pyrazinamide | |
clpC1 | 4038860 | c.1845G>C | synonymous_variant | 0.24 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4038878 | c.1827A>G | synonymous_variant | 0.23 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4038890 | c.1815G>A | synonymous_variant | 0.24 | pyrazinamide | |
clpC1 | 4038905 | c.1800A>G | synonymous_variant | 0.26 | pyrazinamide | |
clpC1 | 4038908 | c.1797C>G | synonymous_variant | 0.25 | pyrazinamide | |
clpC1 | 4038911 | c.1794G>T | synonymous_variant | 0.25 | pyrazinamide | |
clpC1 | 4038914 | c.1791G>C | synonymous_variant | 0.25 | pyrazinamide | |
clpC1 | 4038917 | c.1788C>T | synonymous_variant | 0.27 | pyrazinamide | |
clpC1 | 4038923 | c.1782A>G | synonymous_variant | 0.28 | pyrazinamide | |
clpC1 | 4038941 | c.1764G>C | synonymous_variant | 0.28 | pyrazinamide | |
clpC1 | 4038953 | c.1752A>G | synonymous_variant | 0.26 | pyrazinamide | |
clpC1 | 4038956 | c.1749T>C | synonymous_variant | 0.26 | pyrazinamide | |
clpC1 | 4038965 | c.1740T>C | synonymous_variant | 0.27 | pyrazinamide | |
clpC1 | 4038971 | c.1734T>C | synonymous_variant | 0.26 | pyrazinamide | |
clpC1 | 4038974 | c.1731T>C | synonymous_variant | 0.26 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4038989 | c.1716T>C | synonymous_variant | 0.3 | pyrazinamide | |
clpC1 | 4038997 | c.1708T>C | synonymous_variant | 0.33 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4039022 | c.1683A>G | synonymous_variant | 0.35 | pyrazinamide | |
clpC1 | 4039046 | c.1659C>T | synonymous_variant | 0.36 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4039064 | c.1641C>T | synonymous_variant | 0.34 | pyrazinamide | |
clpC1 | 4039067 | c.1638G>C | synonymous_variant | 0.35 | pyrazinamide | |
clpC1 | 4039079 | c.1626C>G | synonymous_variant | 0.31 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4039085 | c.1620A>G | synonymous_variant | 0.29 | pyrazinamide | |
clpC1 | 4039091 | c.1614G>C | synonymous_variant | 0.3 | pyrazinamide | |
clpC1 | 4039097 | c.1608G>T | synonymous_variant | 0.3 | pyrazinamide | |
clpC1 | 4039100 | c.1605C>T | synonymous_variant | 0.29 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4039103 | c.1602T>C | synonymous_variant | 0.29 | pyrazinamide | |
clpC1 | 4039106 | c.1599G>C | synonymous_variant | 0.28 | pyrazinamide | |
clpC1 | 4039118 | c.1587C>A | synonymous_variant | 0.29 | pyrazinamide | |
clpC1 | 4039142 | c.1563A>G | synonymous_variant | 0.31 | pyrazinamide | |
clpC1 | 4039145 | c.1560G>C | synonymous_variant | 0.32 | pyrazinamide | |
clpC1 | 4039169 | c.1536A>G | synonymous_variant | 0.31 | pyrazinamide | |
clpC1 | 4039178 | c.1527G>C | synonymous_variant | 0.3 | pyrazinamide | |
clpC1 | 4039183 | c.1522T>C | synonymous_variant | 0.29 | pyrazinamide | |
clpC1 | 4039187 | c.1518G>T | synonymous_variant | 0.29 | pyrazinamide | |
clpC1 | 4039190 | c.1515C>G | synonymous_variant | 0.29 | pyrazinamide | |
clpC1 | 4039220 | c.1485G>C | synonymous_variant | 0.33 | pyrazinamide | |
clpC1 | 4039241 | c.1464G>C | synonymous_variant | 0.35 | pyrazinamide | |
clpC1 | 4039274 | c.1431G>C | synonymous_variant | 0.35 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4039286 | c.1419T>C | synonymous_variant | 0.36 | pyrazinamide | |
clpC1 | 4039295 | c.1410A>C | synonymous_variant | 0.35 | pyrazinamide | |
clpC1 | 4039298 | c.1407T>C | synonymous_variant | 0.35 | pyrazinamide | |
clpC1 | 4039310 | c.1395A>G | synonymous_variant | 0.31 | pyrazinamide | |
clpC1 | 4039313 | c.1392C>G | synonymous_variant | 0.31 | pyrazinamide | |
clpC1 | 4039320 | p.Ala462Gly | missense_variant | 0.28 | pyrazinamide | |
clpC1 | 4039322 | c.1383T>C | synonymous_variant | 0.28 | pyrazinamide | |
clpC1 | 4039337 | p.Thr456Gln | missense_variant | 0.34 | pyrazinamide | |
clpC1 | 4039352 | c.1353C>T | synonymous_variant | 0.33 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4039361 | c.1344C>G | synonymous_variant | 0.29 | pyrazinamide | |
clpC1 | 4039382 | c.1323C>G | synonymous_variant | 0.25 | pyrazinamide | |
clpC1 | 4039391 | c.1314T>G | synonymous_variant | 0.23 | pyrazinamide | |
clpC1 | 4039541 | c.1164C>G | synonymous_variant | 0.2 | pyrazinamide | |
clpC1 | 4039556 | c.1149G>C | synonymous_variant | 0.28 | pyrazinamide | |
clpC1 | 4039559 | c.1146C>G | synonymous_variant | 0.27 | pyrazinamide | |
clpC1 | 4039570 | p.Met379Leu | missense_variant | 0.28 | pyrazinamide | Uncertain significance |
clpC1 | 4039574 | p.Ala377Gly | missense_variant | 0.28 | pyrazinamide | |
clpC1 | 4039577 | c.1128T>C | synonymous_variant | 0.28 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4039589 | c.1116G>C | synonymous_variant | 0.26 | pyrazinamide | |
clpC1 | 4039592 | c.1113G>C | synonymous_variant | 0.27 | pyrazinamide | |
clpC1 | 4039610 | c.1095G>C | synonymous_variant | 0.28 | pyrazinamide | |
clpC1 | 4039616 | c.1089G>C | synonymous_variant | 0.29 | pyrazinamide | |
clpC1 | 4039622 | c.1083C>T | synonymous_variant | 0.28 | pyrazinamide | |
clpC1 | 4039649 | c.1056G>C | synonymous_variant | 0.29 | pyrazinamide | |
clpC1 | 4039652 | c.1053G>C | synonymous_variant | 0.28 | pyrazinamide | |
clpC1 | 4039670 | c.1035G>C | synonymous_variant | 0.29 | pyrazinamide | |
clpC1 | 4039682 | c.1023C>G | synonymous_variant | 0.31 | pyrazinamide | |
clpC1 | 4039694 | c.1011G>C | synonymous_variant | 0.3 | pyrazinamide | |
clpC1 | 4039724 | c.981A>G | synonymous_variant | 0.28 | pyrazinamide | |
clpC1 | 4039733 | c.972G>C | synonymous_variant | 0.27 | pyrazinamide | |
clpC1 | 4039742 | c.963C>T | synonymous_variant | 0.28 | pyrazinamide | |
clpC1 | 4039748 | c.957G>C | synonymous_variant | 0.28 | pyrazinamide | |
clpC1 | 4039751 | c.954A>G | synonymous_variant | 0.28 | pyrazinamide | |
clpC1 | 4039757 | c.948A>G | synonymous_variant | 0.25 | pyrazinamide | |
clpC1 | 4039760 | c.945T>C | synonymous_variant | 0.26 | pyrazinamide | |
clpC1 | 4039769 | c.936C>G | synonymous_variant | 0.23 | pyrazinamide | |
clpC1 | 4039778 | c.927A>G | synonymous_variant | 0.23 | pyrazinamide | |
clpC1 | 4039793 | c.912C>G | synonymous_variant | 0.22 | pyrazinamide | |
clpC1 | 4039802 | c.903G>C | synonymous_variant | 0.22 | pyrazinamide | |
clpC1 | 4039865 | c.840T>C | synonymous_variant | 0.25 | pyrazinamide | |
clpC1 | 4039883 | c.822G>A | synonymous_variant | 0.21 | pyrazinamide | |
clpC1 | 4039889 | c.816G>C | synonymous_variant | 0.21 | pyrazinamide | |
clpC1 | 4039898 | c.807C>G | synonymous_variant | 0.28 | pyrazinamide | |
clpC1 | 4039904 | c.801A>G | synonymous_variant | 0.28 | pyrazinamide | |
clpC1 | 4039931 | c.774T>C | synonymous_variant | 0.23 | pyrazinamide | |
clpC1 | 4039934 | c.771G>A | synonymous_variant | 0.21 | pyrazinamide | |
clpC1 | 4039937 | c.768G>C | synonymous_variant | 0.21 | pyrazinamide | |
clpC1 | 4039946 | c.759A>T | synonymous_variant | 0.18 | pyrazinamide | |
clpC1 | 4039949 | c.756G>C | synonymous_variant | 0.21 | pyrazinamide | |
clpC1 | 4039952 | c.753T>C | synonymous_variant | 0.23 | pyrazinamide | |
clpC1 | 4039958 | c.747G>C | synonymous_variant | 0.24 | pyrazinamide | |
clpC1 | 4039985 | c.720G>A | synonymous_variant | 0.21 | pyrazinamide | |
clpC1 | 4039991 | c.714G>C | synonymous_variant | 0.2 | pyrazinamide | |
clpC1 | 4040003 | c.702G>C | synonymous_variant | 0.2 | pyrazinamide | |
clpC1 | 4040021 | c.684A>C | synonymous_variant | 0.2 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040024 | c.681A>G | synonymous_variant | 0.22 | pyrazinamide | |
clpC1 | 4040033 | c.672G>C | synonymous_variant | 0.24 | pyrazinamide | |
clpC1 | 4040042 | c.663C>T | synonymous_variant | 0.25 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040087 | c.618G>C | synonymous_variant | 0.21 | pyrazinamide | |
clpC1 | 4040306 | c.399G>T | synonymous_variant | 0.24 | pyrazinamide | |
clpC1 | 4040309 | c.396C>G | synonymous_variant | 0.27 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040324 | c.381G>C | synonymous_variant | 0.26 | pyrazinamide | |
clpC1 | 4040335 | c.370C>T | synonymous_variant | 0.22 | pyrazinamide | |
clpC1 | 4040336 | c.369G>C | synonymous_variant | 0.22 | pyrazinamide | |
clpC1 | 4040345 | c.360C>G | synonymous_variant | 0.17 | pyrazinamide | |
clpC1 | 4040348 | c.357G>C | synonymous_variant | 0.17 | pyrazinamide | |
clpC1 | 4040354 | c.351A>G | synonymous_variant | 0.16 | pyrazinamide | |
clpC1 | 4040357 | c.348T>C | synonymous_variant | 0.16 | pyrazinamide | |
clpC1 | 4040387 | c.318A>G | synonymous_variant | 0.17 | pyrazinamide | |
clpC1 | 4040390 | c.315C>G | synonymous_variant | 0.16 | pyrazinamide | |
clpC1 | 4040411 | c.294T>C | synonymous_variant | 0.15 | pyrazinamide | Not assoc w R - Interim |
clpC1 | 4040531 | c.174T>C | synonymous_variant | 0.17 | pyrazinamide | |
glpK | 4138377 | p.Val460Ala | missense_variant | 1.0 | levofloxacin | Not assoc w R |
moxifloxacin | Not assoc w R | |||||
isoniazid | Not assoc w R | |||||
streptomycin | Not assoc w R | |||||
rifampicin | Not assoc w R | |||||
ethambutol | Not assoc w R | |||||
embC | 4242643 | c.2781C>T | synonymous_variant | 1.0 | ethambutol | Not assoc w R |
embC | 4242970 | c.3108C>T | synonymous_variant | 1.0 | ethambutol | Not assoc w R |
embA | 4244220 | c.988C>T | synonymous_variant | 1.0 | ethambutol | Not assoc w R |
embB | 4246551 | p.Asn13Ser | missense_variant | 1.0 | ethambutol | Not assoc w R |
embB | 4246864 | c.351C>T | synonymous_variant | 1.0 | ethambutol | Not assoc w R |
embB | 4247646 | p.Glu378Ala | missense_variant | 1.0 | ethambutol | Not assoc w R |
embB | 4248118 | c.1605T>C | synonymous_variant | 0.24 | ethambutol | |
embB | 4248130 | c.1617G>C | synonymous_variant | 0.25 | ethambutol | |
embB | 4248133 | c.1620C>G | synonymous_variant | 0.24 | ethambutol | |
embB | 4248142 | c.1629T>C | synonymous_variant | 0.24 | ethambutol | |
embB | 4248143 | p.Leu544Ile | missense_variant | 0.24 | ethambutol | |
embB | 4248157 | c.1644A>G | synonymous_variant | 0.23 | ethambutol | Not assoc w R - Interim |
embB | 4248158 | p.Cys549Ser | missense_variant | 0.23 | ethambutol | |
embB | 4248167 | p.Thr552Ala | missense_variant | 0.24 | ethambutol | |
embB | 4248170 | p.Ala553Ser | missense_variant | 0.25 | ethambutol | |
embB | 4248173 | p.Val554Leu | missense_variant | 0.25 | ethambutol | |
embB | 4248199 | c.1686A>G | synonymous_variant | 0.21 | ethambutol | |
embB | 4248200 | p.Ile563Val | missense_variant | 0.21 | ethambutol | |
embB | 4248205 | c.1692C>G | synonymous_variant | 0.21 | ethambutol | |
embB | 4248206 | p.Ser565Gly | missense_variant | 0.21 | ethambutol | Uncertain significance |
aftB | 4267858 | p.Ile327Val | missense_variant | 1.0 | ethambutol | Not assoc w R |
ubiA | 4269351 | c.483C>T | synonymous_variant | 1.0 | ethambutol | Not assoc w R |
ubiA | 4269387 | p.Glu149Asp | missense_variant | 1.0 | ethambutol | Not assoc w R |
ubiA | 4269606 | c.228T>C | synonymous_variant | 1.0 | ethambutol | Not assoc w R |
whiB6 | 4338595 | c.-75delG | upstream_gene_variant | 1.0 | kanamycin | Not assoc w R |
capreomycin | Not assoc w R | |||||
amikacin | Not assoc w R | |||||
whiB6 | 4338732 | c.-211C>T | upstream_gene_variant | 1.0 | kanamycin | |
capreomycin | ||||||
amikacin | ||||||
gid | 4407588 | c.615A>G | synonymous_variant | 1.0 | streptomycin | Not assoc w R |