Rv0006 - c.2085T>G
Drug resistance types
36 Sensitive
3 RR-TB
54 HR-TB
4 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
46 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1 | 1 |
| lineage4.9 | 11 |
| lineage4.1.1.2 | 1 |
| 68 | |
| lineage4.3.4.2.1 | 1 |
| lineage3 | 1 |
| lineage4 | 43 |
| lineage2.2.1 | 6 |
| lineage4.1.2 | 2 |
| lineage4.3.4.1 | 1 |
| lineage4.8 | 1 |
| lineage4.3.3 | 1 |
| lineage4.3.2.1 | 1 |
| lineage2.2 | 2 |
| La1.2 | 1 |
| La1 | 1 |
| lineage6.1.3 | 1 |
| lineage2.2.1.1 | 1 |
| La1.7.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 145 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2446566 | Other | lineage4.1 | None | ERR4818536 | Other | lineage4.9 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR1035162 | Other | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341456 | Other | None | SRR5341387 | Other | lineage4 | None | ERR1035138 | MDR-TB | None | SRR5341418 | Other | None | ERR4819462 | Other | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341323 | Sensitive | lineage4 | None | ERR1023509 | Other | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341469 | Other | lineage4 | None | ERR2693231 | Other | None | SRR5341467 | Other | lineage4 | None | ERR2693230 | Other | None | ERR2693257 | Other | None | ERR2693254 | Other | None | SRR6046141 | Other | lineage4.9 | None | ERR4821655 | Sensitive | lineage4 | None | SRR6045555 | HR-TB | None | SRR6045053 | Other | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6046133 | HR-TB | None | SRR6045217 | Other | lineage4 | None | SRR6046299 | HR-TB | None | SRR6046210 | Other | lineage4 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6045233 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046492 | Other | None | SRR6046482 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | SRR6046824 | HR-TB | None | SRR6511621 | HR-TB | None | SRR6832787 | RR-TB | lineage2.2.1 | None | SRR9970980 | Other | lineage4.1.2 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | ERR294266 | HR-TB | None | ERR502889 | Other | None | ERR323066 | Sensitive | lineage4 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR1035122 | Sensitive | None | ERR323108 | HR-TB | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR067681 | HR-TB | None | ERR067699 | HR-TB | lineage4 | None | ERR323107 | Other | lineage4 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063857 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR133986 | HR-TB | None | ERR1063896 | Sensitive | None | ERR133825 | Sensitive | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR3283032 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283024 | Other | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283014 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3283028 | Other | None | ERR3283031 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3439432 | Other | None | ERR3283057 | HR-TB | lineage4 | None | ERR3797061 | Other | None | ERR3445504 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3797015 | HR-TB | None | ERR3797017 | Other | None | ERR3797036 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797044 | Other | None | ERR3797048 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3797014 | Other | None | ERR3797043 | HR-TB | None | ERR3797063 | HR-TB | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797064 | Sensitive | None | ERR3797086 | Other | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4024991 | Other | None | ERR403298 | HR-TB | lineage4 | None | ERR405209 | Sensitive | lineage4 | None | ERR4769450 | HR-TB | None | ERR4769452 | HR-TB | None | ERR4769521 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4798099 | Other | None | ERR4797264 | Sensitive | None | ERR4798262 | HR-TB | La1 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4798406 | HR-TB | None | ERR4799378 | Sensitive | lineage4 | None | ERR6358979 | Other | None | ERR6866807 | HR-TB | lineage4 | None | ERR6866022 | Other | None | ERR6866547 | Sensitive | lineage4 | None | ERR6866639 | Other | None | ERR736834 | Sensitive | lineage4 | None | ERR736839 | Other | None | ERR736837 | Other | lineage4.9 | None | ERR736872 | Sensitive | lineage4 | None | ERR736856 | HR-TB | lineage4 | None | ERR9119669 | HR-TB | None | SRR10809074 | Sensitive | lineage4 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10808805 | Sensitive | None | SRR14801749 | Sensitive | None | SRR1158918 | Sensitive | lineage4 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | ERR158583 | HR-TB | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR3675502 | Other | None | SRR3675550 | Other | None | ERR212138 | HR-TB | lineage4 | None | SRR3675234 | Other | None | SRR3675246 | Sensitive | lineage4 | None |
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