Rv0006 - c.2085T>G


Drug resistance types
19 Sensitive 5 RR-TB 26 HR-TB 15 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 32 Other
lineage Counts
lineage Count
lineage4.1.2 1
La3;M.canetti;lineage4.9 1
La1.7;lineage4.9 4
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
lineage4.9 33
lineage2.1;lineage4.9 1
M.canetti;lineage4.9 1
La3;lineage4.9 2
lineage2.1;lineage4.1.4;lineage4.9 1
La1;lineage4.9 2
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
La1;lineage4.1.2 1
lineage2.2 1
lineage3 1
La1.8.1 1
lineage4.9;lineage6.1.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La1.7.X-unk4;lineage4.9 1
La2;lineage2.2 1
La1.6;La3;M.canetti;lineage4.2.2 1
La1.7.1 1
M.canetti;lineage4.2;lineage4.9 1
La2;lineage4.9 1
lineage6.1.3 1
lineage2.2.1 4
lineage4.2;lineage4.8.1;lineage4.9 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage4.3.4.2.1 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage4.2;lineage4.9 1
lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage3.1.2.1;lineage4 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage4.3.1;lineage4.9;lineage6 1
lineage4.6.3;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.1.1.2 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.3.2.1 1
lineage4.3.4.1 1
lineage2.2.1.1 1
M.canetti;lineage4.2 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
M.canetti;lineage4.6.4;lineage4.9 1
La1.7;lineage4.9;lineage6 1
lineage4.3.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 1
spoligotype Counts
spoligotype Count
None 99
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR9970980 HR-TB lineage4.1.2 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
SRR14801759 HR-TB La1.7;lineage4.9 None
ERR323115 Sensitive lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR2446566 Other lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
SRR14801749 HR-TB lineage4.9 None
SRR6045219 HR-TB lineage4.9 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
SRR6511621 Sensitive lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR9970978 Sensitive La1;lineage4.1.2 None
ERR4799513 HR-TB lineage2.2 None
SRR3675585 Sensitive lineage4.9 None
ERR4797264 Sensitive lineage4.9 None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR2693252 Sensitive lineage4.9 None
SRR7236177 Other La1.8.1 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR137286 Other lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR1792478 HR-TB La1.7.1 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
SRR6045548 Sensitive lineage4.9 None
ERR176741 Other lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR9787256 Other lineage6.1.3 None
ERR4769521 RR-TB lineage4.9 None
SRR3675235 Sensitive lineage4.9 None
SRR29096879 Sensitive lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR6866639 Other lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR1063849 HR-TB lineage4.9 None
ERR736834 Sensitive lineage4.9 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR9971112 Other lineage2.2.1 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
SRR6832787 Sensitive lineage2.2.1 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR28351455 Other lineage3.1.2.1;lineage4 None
ERR323062 Sensitive lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR1063896 Sensitive None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR323107 Sensitive lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
SRR3675446 RR-TB lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4818252 Sensitive lineage4.1.1.2 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR5341461 HR-TB lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR3797064 Other La3;lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR1023509 Other lineage4.9 None
SRR3675246 Other lineage4.9 None
SRR5341308 Sensitive lineage4.9 None
ERR11465353 Sensitive lineage4.3.4.1 None
SRR1180147 Other lineage2.2.1.1 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR11662690 HR-TB lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR6045555 Other lineage4.9 None
ERR6866807 Other lineage4.9 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR736872 HR-TB lineage4.9 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None