TB-Profiler result

Run: SRR6832787
Summary

Run ID: SRR6832787

Sample name:

Date: 04-04-2023 17:38:48

Number of reads: 1536226

Percentage reads mapped: 71.78

Strain: lineage2.2.1

Drug-resistance: RR-TB

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Drug resistance: This table reports drug-resistance associated mutations found in known resistance genes
Drug Resistance Supporting mutations
Lineage Table: The lineage is inferred by analysing lineage specific SNPs
Lineage Family Main Spoligotype RDs Frequency
lineage2 East-Asian Beijing RD105 0.97
lineage2.2 East-Asian (Beijing) Beijing-RD207 RD105;RD207 0.96
lineage2.2.1 East-Asian (Beijing) Beijing-RD181 RD105;RD207;RD181 0.96
Drug resistance-Associated Mutations: This table reports mutations found in candidate resistance genes which have been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs
rpoB 761135 p.Leu443Phe missense_variant 0.24 rifampicin
embB 4247448 p.His312Arg missense_variant 0.17 ethambutol
Non-Associated Mutations: This table reports mutations found in candidate resistance genes which have not been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction
gyrB 5254 c.15A>G synonymous_variant 0.22
gyrB 5284 c.45G>A synonymous_variant 0.29
gyrB 5287 c.48T>C synonymous_variant 0.3
gyrB 5293 c.54C>G synonymous_variant 0.33
gyrB 5302 c.63A>G synonymous_variant 0.38
gyrB 5305 c.66G>A synonymous_variant 0.4
gyrB 5308 c.69G>A synonymous_variant 0.4
gyrB 5341 c.102T>C synonymous_variant 0.35
gyrB 5359 c.120C>T synonymous_variant 0.25
gyrB 5363 c.124_126delTTAinsCTG synonymous_variant 0.25
gyrB 5377 c.138T>C synonymous_variant 0.34
gyrB 5422 c.183T>C synonymous_variant 0.21
gyrB 5425 c.186A>G synonymous_variant 0.21
gyrB 5426 p.Thr63Ala missense_variant 0.21
gyrB 5431 c.192A>C synonymous_variant 0.21
gyrB 5434 c.195G>A synonymous_variant 0.2
gyrB 5436 p.Asn66Ser missense_variant 0.19
gyrB 5440 c.201A>G synonymous_variant 0.19
gyrB 5449 c.210T>C synonymous_variant 0.26
gyrB 5455 c.216T>C synonymous_variant 0.25
gyrB 5470 c.231C>G synonymous_variant 0.29
gyrB 5485 c.246C>T synonymous_variant 0.24
gyrB 5488 c.249C>A synonymous_variant 0.19
gyrB 5491 c.252T>C synonymous_variant 0.18
gyrB 5500 c.261C>A synonymous_variant 0.27
gyrB 5502 p.Thr88Met missense_variant 0.22
gyrB 5527 c.288C>G synonymous_variant 0.2
gyrB 5542 c.303A>C synonymous_variant 0.2
gyrB 5545 c.306A>G synonymous_variant 0.19
gyrB 5548 c.309A>G synonymous_variant 0.17
gyrB 5551 c.312T>C synonymous_variant 0.17
gyrB 5560 c.321C>G synonymous_variant 0.2
gyrB 5569 c.330C>T synonymous_variant 0.19
gyrB 5836 c.597C>T synonymous_variant 0.19
gyrB 5851 c.612G>C synonymous_variant 0.21
gyrB 5860 c.621C>T synonymous_variant 0.18
gyrB 5869 c.630C>T synonymous_variant 0.18
gyrB 5870 p.Glu211Gln missense_variant 0.18
gyrB 5873 c.634A>C synonymous_variant 0.18
gyrB 6115 c.876A>G synonymous_variant 0.17
gyrB 6121 c.882C>T synonymous_variant 0.17
gyrB 6127 c.888G>C synonymous_variant 0.16
gyrB 6145 c.906C>T synonymous_variant 0.18
gyrB 6178 c.939C>T synonymous_variant 0.25
gyrB 6181 c.942C>G synonymous_variant 0.26
gyrB 6196 c.957C>G synonymous_variant 0.29
gyrB 6214 c.975G>C synonymous_variant 0.34
gyrB 6247 c.1008G>A synonymous_variant 0.22
gyrB 6250 c.1011A>G synonymous_variant 0.26
gyrB 6253 c.1014G>C synonymous_variant 0.25
gyrB 6259 p.Asp340Glu missense_variant 0.24
gyrB 6280 c.1041T>C synonymous_variant 0.32
gyrB 6286 c.1047T>C synonymous_variant 0.3
gyrB 6298 c.1059C>G synonymous_variant 0.28
gyrB 6299 c.1060C>T synonymous_variant 0.3
gyrA 6307 c.-995T>G upstream_gene_variant 0.26
gyrA 6313 c.-989C>T upstream_gene_variant 0.24
gyrA 6319 c.-983G>C upstream_gene_variant 0.26
gyrA 6331 c.-971A>G upstream_gene_variant 0.24
gyrA 6358 c.-944C>G upstream_gene_variant 0.22
gyrA 6361 c.-941G>A upstream_gene_variant 0.27
gyrA 6362 c.-940T>C upstream_gene_variant 0.27
gyrA 6379 c.-923C>G upstream_gene_variant 0.17
gyrA 6382 c.-920A>G upstream_gene_variant 0.17
gyrA 6388 c.-914T>C upstream_gene_variant 0.17
gyrA 6826 c.-476G>C upstream_gene_variant 0.24
gyrA 6841 c.-461T>C upstream_gene_variant 0.2
gyrA 6844 c.-458T>C upstream_gene_variant 0.2
gyrA 6853 c.-449A>G upstream_gene_variant 0.19
gyrA 6856 c.-446T>C upstream_gene_variant 0.18
gyrA 6859 c.-443T>C upstream_gene_variant 0.22
gyrA 6862 c.-440C>G upstream_gene_variant 0.17
gyrA 6866 c.-436C>T upstream_gene_variant 0.17
gyrA 6872 c.-430T>C upstream_gene_variant 0.15
gyrA 6886 c.-416C>T upstream_gene_variant 0.16
gyrA 6889 c.-413G>C upstream_gene_variant 0.17
gyrA 6898 c.-404G>T upstream_gene_variant 0.17
gyrA 7120 c.-182T>C upstream_gene_variant 0.25
gyrA 7123 c.-179C>G upstream_gene_variant 0.25
gyrA 7129 c.-173T>G upstream_gene_variant 0.29
gyrA 7132 c.-170T>G upstream_gene_variant 0.27
gyrA 7141 c.-161T>C upstream_gene_variant 0.33
gyrA 7147 c.-155G>C upstream_gene_variant 0.31
gyrA 7151 c.-151C>T upstream_gene_variant 0.31
gyrA 7165 c.-137C>A upstream_gene_variant 0.15
gyrA 7362 p.Glu21Gln missense_variant 1.0
gyrA 7585 p.Ser95Thr missense_variant 1.0
gyrA 7595 c.294C>G synonymous_variant 0.15
gyrA 7601 c.300C>G synonymous_variant 0.14
gyrA 7766 c.465C>T synonymous_variant 0.19
gyrA 7769 c.468C>T synonymous_variant 0.19
gyrA 7784 c.483A>G synonymous_variant 0.18
gyrA 7787 c.486G>A synonymous_variant 0.19
gyrA 7799 c.498A>G synonymous_variant 0.16
gyrA 7997 c.696A>G synonymous_variant 0.17
gyrA 8000 c.699G>C synonymous_variant 0.19
gyrA 8020 p.Thr240Ile missense_variant 0.19
gyrA 8069 c.768T>C synonymous_variant 0.2
gyrA 8078 c.777A>G synonymous_variant 0.19
gyrA 8084 c.783G>A synonymous_variant 0.18
gyrA 8090 c.789C>G synonymous_variant 0.19
gyrA 8096 c.795T>C synonymous_variant 0.18
gyrA 8099 c.798T>C synonymous_variant 0.17
gyrA 8105 c.804G>T synonymous_variant 0.18
gyrA 8111 c.810G>C synonymous_variant 0.19
gyrA 8121 c.820T>C synonymous_variant 0.19
gyrA 8156 c.855T>C synonymous_variant 0.18
gyrA 8168 c.867A>G synonymous_variant 0.17
gyrA 8174 c.873C>G synonymous_variant 0.15
gyrA 8177 c.876A>C synonymous_variant 0.15
gyrA 8447 c.1146C>A synonymous_variant 0.2
gyrA 8450 c.1149G>A synonymous_variant 0.2
gyrA 8453 c.1152A>C synonymous_variant 0.21
gyrA 8462 c.1161A>G synonymous_variant 0.19
gyrA 8471 c.1170T>C synonymous_variant 0.21
gyrA 8510 c.1209G>A synonymous_variant 0.29
gyrA 8513 c.1212C>G synonymous_variant 0.29
gyrA 8516 c.1215T>C synonymous_variant 0.29
gyrA 8519 c.1218A>C synonymous_variant 0.3
gyrA 8531 c.1230G>A synonymous_variant 0.39
gyrA 8546 c.1245T>C synonymous_variant 0.32
gyrA 8561 c.1260A>G synonymous_variant 0.33
gyrA 8562 c.1261C>T synonymous_variant 0.33
gyrA 8571 c.1270C>T synonymous_variant 0.45
gyrA 8603 c.1302A>G synonymous_variant 0.38
gyrA 8609 c.1308G>C synonymous_variant 0.42
gyrA 8619 c.1318T>C synonymous_variant 0.42
gyrA 8627 c.1326C>T synonymous_variant 0.36
gyrA 8633 c.1332C>G synonymous_variant 0.42
gyrA 8645 c.1344C>T synonymous_variant 0.42
gyrA 8655 p.Ile452Val missense_variant 0.42
gyrA 8666 c.1365G>C synonymous_variant 0.44
gyrA 8693 c.1392T>C synonymous_variant 0.4
gyrA 8694 c.1393C>T synonymous_variant 0.4
gyrA 8711 c.1410A>C synonymous_variant 0.38
gyrA 8723 c.1422G>A synonymous_variant 0.36
gyrA 8729 c.1428T>C synonymous_variant 0.33
gyrA 8732 c.1431G>C synonymous_variant 0.33
gyrA 8752 p.Ala484Gly missense_variant 0.33
gyrA 8756 c.1455A>G synonymous_variant 0.44
gyrA 8762 c.1461G>C synonymous_variant 0.44
gyrA 8767 p.Arg489Lys missense_variant 0.43
gyrA 8783 c.1482G>T synonymous_variant 0.35
gyrA 8786 c.1485T>C synonymous_variant 0.35
gyrA 8795 c.1494C>T synonymous_variant 0.29
gyrA 8796 p.Ile499Val missense_variant 0.27
gyrA 8801 c.1500G>C synonymous_variant 0.26
gyrA 8810 c.1509A>C synonymous_variant 0.28
gyrA 8813 c.1512C>T synonymous_variant 0.27
gyrA 8825 c.1524G>A synonymous_variant 0.24
gyrA 8828 c.1527T>C synonymous_variant 0.22
gyrA 8829 c.1528T>C synonymous_variant 0.23
gyrA 8852 c.1551T>G synonymous_variant 0.26
gyrA 8858 c.1557T>C synonymous_variant 0.15
gyrA 8897 c.1596T>C synonymous_variant 0.25
gyrA 8903 c.1602T>C synonymous_variant 0.28
gyrA 8915 c.1614A>G synonymous_variant 0.29
gyrA 8924 c.1623C>G synonymous_variant 0.34
gyrA 8933 c.1632G>A synonymous_variant 0.36
gyrA 8939 c.1638T>C synonymous_variant 0.28
gyrA 8942 c.1641G>C synonymous_variant 0.26
gyrA 8945 c.1644G>T synonymous_variant 0.25
gyrA 8946 c.1645_1647delTTGinsCTC synonymous_variant 0.25
gyrA 8981 c.1680G>C synonymous_variant 0.34
gyrA 8987 c.1686C>G synonymous_variant 0.34
gyrA 8998 p.Leu566Trp missense_variant 0.37
gyrA 9003 c.1702C>T synonymous_variant 0.39
gyrA 9017 c.1716C>T synonymous_variant 0.39
gyrA 9023 c.1722A>C synonymous_variant 0.37
gyrA 9029 c.1728T>G synonymous_variant 0.36
gyrA 9050 p.Asp583Glu missense_variant 0.42
gyrA 9065 c.1764C>G synonymous_variant 0.4
gyrA 9068 c.1767G>C synonymous_variant 0.38
gyrA 9071 c.1770G>C synonymous_variant 0.41
gyrA 9080 c.1779G>C synonymous_variant 0.38
gyrA 9089 c.1788G>C synonymous_variant 0.34
gyrA 9101 c.1800A>G synonymous_variant 0.26
gyrA 9119 c.1818A>G synonymous_variant 0.15
gyrA 9197 c.1896G>C synonymous_variant 0.21
gyrA 9200 c.1899A>G synonymous_variant 0.2
gyrA 9218 c.1917C>T synonymous_variant 0.32
gyrA 9230 c.1929T>C synonymous_variant 0.34
gyrA 9236 c.1935G>C synonymous_variant 0.45
gyrA 9242 c.1941A>C synonymous_variant 0.48
gyrA 9252 p.Val651Ile missense_variant 0.55
gyrA 9257 c.1956C>T synonymous_variant 0.55
gyrA 9284 c.1983T>G synonymous_variant 0.5
gyrA 9296 c.1995T>C synonymous_variant 0.32
gyrA 9304 p.Gly668Glu missense_variant 1.0
gyrA 9315 c.2014C>T synonymous_variant 0.28
gyrA 9323 c.2022C>T synonymous_variant 0.31
gyrA 9341 c.2040C>G synonymous_variant 0.32
gyrA 9345 c.2044A>C synonymous_variant 0.29
gyrA 9371 c.2070G>A synonymous_variant 0.28
gyrA 9374 c.2073G>C synonymous_variant 0.3
gyrA 9377 c.2076A>G synonymous_variant 0.32
gyrA 9383 c.2082T>C synonymous_variant 0.28
gyrA 9386 c.2085T>G synonymous_variant 0.3
gyrA 9395 c.2094G>C synonymous_variant 0.34
gyrA 9398 c.2097T>G synonymous_variant 0.38
gyrA 9401 c.2100G>A synonymous_variant 0.4
gyrA 9413 c.2112G>A synonymous_variant 0.27
gyrA 9419 c.2118T>C synonymous_variant 0.25
gyrA 9420 p.Ile707Ala missense_variant 0.25
gyrA 9449 c.2148C>G synonymous_variant 0.22
gyrA 9452 c.2151G>C synonymous_variant 0.19
gyrA 9476 c.2175G>C synonymous_variant 0.16
gyrA 9488 c.2187G>C synonymous_variant 0.15
gyrA 9494 c.2193T>C synonymous_variant 0.16
gyrA 9497 c.2196G>C synonymous_variant 0.15
gyrA 9527 c.2226A>G synonymous_variant 0.17
fgd1 490803 c.21T>A synonymous_variant 0.19
fgd1 490809 c.27A>G synonymous_variant 0.29
fgd1 490818 c.36C>T synonymous_variant 0.35
fgd1 490830 c.48A>C synonymous_variant 0.3
fgd1 490851 c.69A>T synonymous_variant 0.39
fgd1 490853 p.Ala24Gly missense_variant 0.39
fgd1 490863 c.81C>A synonymous_variant 0.43
fgd1 490869 c.87C>T synonymous_variant 0.41
fgd1 490890 c.108C>G synonymous_variant 0.41
fgd1 490896 c.114C>T synonymous_variant 0.42
fgd1 490905 c.123T>C synonymous_variant 0.31
fgd1 490911 c.129T>C synonymous_variant 0.31
fgd1 490921 p.Gln47Lys missense_variant 0.28
fgd1 490929 c.147C>G synonymous_variant 0.24
fgd1 490932 c.150T>C synonymous_variant 0.25
fgd1 490935 c.153C>G synonymous_variant 0.26
fgd1 490945 c.163C>T synonymous_variant 0.23
fgd1 490962 c.180T>C synonymous_variant 0.16
fgd1 490971 c.189A>G synonymous_variant 0.16
fgd1 490974 c.192T>C synonymous_variant 0.19
fgd1 490980 p.Asn66Lys missense_variant 0.17
fgd1 490984 p.Leu68Val missense_variant 0.17
fgd1 491007 c.225G>C synonymous_variant 0.19
fgd1 491013 c.231C>G synonymous_variant 0.21
fgd1 491043 c.261T>G synonymous_variant 0.24
fgd1 491049 c.267T>G synonymous_variant 0.21
fgd1 491063 p.Gly94Ala missense_variant 0.18
fgd1 491067 c.285C>T synonymous_variant 0.15
fgd1 491077 p.Asn99Asp missense_variant 0.18
fgd1 491085 c.303T>G synonymous_variant 0.19
fgd1 491091 c.309T>G synonymous_variant 0.19
fgd1 491094 c.312C>T synonymous_variant 0.16
fgd1 491106 c.324T>C synonymous_variant 0.2
fgd1 491121 c.339A>G synonymous_variant 0.21
fgd1 491142 c.360C>G synonymous_variant 0.19
fgd1 491151 c.369G>A synonymous_variant 0.16
fgd1 491154 p.Glu124Asp missense_variant 0.16
fgd1 491163 c.381G>A synonymous_variant 0.15
fgd1 491166 c.384G>C synonymous_variant 0.18
fgd1 491181 c.399T>C synonymous_variant 0.16
fgd1 491512 p.Asn244His missense_variant 0.17
fgd1 491742 c.960T>C synonymous_variant 1.0
mshA 575561 p.Met72Val missense_variant 0.16
mshA 575629 c.282A>T synonymous_variant 0.18
mshA 575633 p.Ala96Thr missense_variant 0.18
mshA 575652 p.Arg102Gln missense_variant 0.2
mshA 575659 c.312A>G synonymous_variant 0.24
mshA 575662 c.315C>A synonymous_variant 0.22
mshA 575665 c.318G>C synonymous_variant 0.25
mshA 575686 c.339G>A synonymous_variant 0.3
mshA 575689 c.342G>C synonymous_variant 0.38
mshA 575692 c.345G>A synonymous_variant 0.39
mshA 575705 c.358T>C synonymous_variant 0.36
mshA 575713 c.366G>A synonymous_variant 0.35
mshA 575732 c.385_387delCTTinsTTG synonymous_variant 0.32
mshA 575737 c.390T>C synonymous_variant 0.31
mshA 575746 c.399C>G synonymous_variant 0.33
mshA 575767 c.420G>A synonymous_variant 0.31
mshA 575770 c.423G>C synonymous_variant 0.32
mshA 575772 p.Val142Ala missense_variant 0.32
mshA 575785 c.438T>C synonymous_variant 0.32
mshA 575821 c.474G>C synonymous_variant 0.23
mshA 575824 c.477T>C synonymous_variant 0.17
mshA 575842 c.495G>C synonymous_variant 0.22
mshA 575848 c.501C>T synonymous_variant 0.24
mshA 575872 c.525C>T synonymous_variant 0.17
mshA 575884 c.537G>C synonymous_variant 0.15
mshA 575907 p.Ala187Val missense_variant 0.88
mshA 576230 p.Ile295Val missense_variant 0.16
mshA 576233 p.Ile296Val missense_variant 0.18
mshA 576238 c.891G>C synonymous_variant 0.2
mshA 576247 c.900A>G synonymous_variant 0.21
mshA 576259 c.912C>T synonymous_variant 0.18
mshA 576262 c.915T>A synonymous_variant 0.18
ccsA 620337 c.447C>G synonymous_variant 0.14
ccsA 620340 c.450C>G synonymous_variant 0.16
ccsA 620358 c.468C>G synonymous_variant 0.15
ccsA 620397 c.507C>G synonymous_variant 0.18
ccsA 620404 c.514C>T synonymous_variant 0.19
ccsA 620415 c.525T>C synonymous_variant 0.18
ccsA 620604 c.714C>G synonymous_variant 0.19
ccsA 620607 c.717T>G synonymous_variant 0.17
ccsA 620613 c.723C>T synonymous_variant 0.18
ccsA 620619 c.729G>A synonymous_variant 0.15
ccsA 620625 p.Ile245Met missense_variant 1.0
ccsA 620631 c.741T>G synonymous_variant 0.16
ccsA 620829 c.939G>T synonymous_variant 0.16
rpoB 759635 c.-172C>T upstream_gene_variant 0.23
rpoB 759644 c.-163T>A upstream_gene_variant 0.32
rpoB 759647 c.-160T>C upstream_gene_variant 0.29
rpoB 759661 c.-146G>C upstream_gene_variant 0.39
rpoB 759670 c.-137C>T upstream_gene_variant 0.3
rpoB 759671 c.-136G>T upstream_gene_variant 0.29
rpoB 759675 c.-132T>C upstream_gene_variant 0.29
rpoB 759676 c.-131A>G upstream_gene_variant 0.29
rpoB 759701 c.-106A>T upstream_gene_variant 0.25
rpoB 759725 c.-82A>C upstream_gene_variant 0.2
rpoB 759732 c.-75_-74insT upstream_gene_variant 0.14
rpoB 759899 c.93C>T synonymous_variant 0.14
rpoB 759944 c.138A>G synonymous_variant 0.17
rpoB 759945 c.139_141delCTCinsTTG synonymous_variant 0.17
rpoB 760067 c.261G>C synonymous_variant 0.17
rpoB 760070 c.264T>A synonymous_variant 0.17
rpoB 760101 c.295T>C synonymous_variant 0.21
rpoB 760106 c.300G>C synonymous_variant 0.21
rpoB 760112 c.306T>C synonymous_variant 0.2
rpoB 760118 c.312T>C synonymous_variant 0.22
rpoB 760121 c.315T>C synonymous_variant 0.24
rpoB 760130 p.Asp108Glu missense_variant 0.23
rpoB 760142 c.336C>G synonymous_variant 0.21
rpoB 760256 c.450C>T synonymous_variant 0.25
rpoB 760298 c.492G>C synonymous_variant 0.26
rpoB 760307 c.501T>C synonymous_variant 0.29
rpoB 760328 c.522G>C synonymous_variant 0.3
rpoB 760340 c.534G>T synonymous_variant 0.32
rpoB 760343 c.537G>C synonymous_variant 0.32
rpoB 760361 c.555T>C synonymous_variant 0.32
rpoB 760406 c.600G>C synonymous_variant 0.4
rpoB 760409 c.603C>T synonymous_variant 0.33
rpoB 760412 c.606C>G synonymous_variant 0.33
rpoB 760415 c.609C>G synonymous_variant 0.33
rpoB 760418 c.612G>C synonymous_variant 0.33
rpoB 760424 c.618C>G synonymous_variant 0.3
rpoB 760430 c.624T>C synonymous_variant 0.28
rpoB 760445 c.639C>T synonymous_variant 0.24
rpoB 760475 c.669A>G synonymous_variant 0.25
rpoB 760484 c.678A>G synonymous_variant 0.27
rpoB 760508 c.702G>C synonymous_variant 0.32
rpoB 760511 c.705G>C synonymous_variant 0.3
rpoB 760528 p.Gln241Arg missense_variant 0.29
rpoB 760532 c.726T>C synonymous_variant 0.3
rpoB 760533 p.Val243Thr missense_variant 0.3
rpoB 760563 p.Arg253Met missense_variant 0.29
rpoB 760577 c.771G>A synonymous_variant 0.27
rpoB 760625 c.819C>A synonymous_variant 0.16
rpoB 760646 c.840C>G synonymous_variant 0.16
rpoB 760655 c.849A>G synonymous_variant 0.17
rpoB 760661 c.855A>C synonymous_variant 0.19
rpoB 760670 c.864G>C synonymous_variant 0.17
rpoB 760673 c.867G>A synonymous_variant 0.16
rpoB 760674 c.868T>C synonymous_variant 0.16
rpoB 760679 c.873A>G synonymous_variant 0.17
rpoB 760683 c.877T>C synonymous_variant 0.18
rpoB 760817 c.1011A>G synonymous_variant 0.18
rpoB 760830 c.1024T>C synonymous_variant 0.21
rpoB 760841 c.1035T>C synonymous_variant 0.24
rpoB 760845 p.Thr347Ala missense_variant 0.23
rpoB 760859 c.1053T>G synonymous_variant 0.25
rpoB 760868 c.1062C>G synonymous_variant 0.26
rpoB 760919 c.1113C>G synonymous_variant 0.32
rpoB 760920 c.1114C>T synonymous_variant 0.32
rpoB 760928 c.1122G>C synonymous_variant 0.31
rpoB 760946 c.1140A>G synonymous_variant 0.34
rpoB 760971 c.1165C>A synonymous_variant 0.36
rpoB 760994 c.1188G>A synonymous_variant 0.47
rpoB 761006 c.1200C>T synonymous_variant 0.44
rpoB 761015 c.1209G>C synonymous_variant 0.3
rpoB 761027 c.1221A>G synonymous_variant 0.31
rpoB 761036 c.1230G>A synonymous_variant 0.29
rpoB 761037 c.1231T>C synonymous_variant 0.29
rpoB 761051 c.1245G>C synonymous_variant 0.33
rpoB 761066 c.1260G>C synonymous_variant 0.31
rpoB 761096 c.1290G>C synonymous_variant 0.24
rpoB 761097 c.1291_1292delAGinsTC synonymous_variant 0.24
rpoB 761102 c.1296A>G synonymous_variant 0.24
rpoB 761132 c.1326G>C synonymous_variant 0.23
rpoB 761150 c.1344A>G synonymous_variant 0.22
rpoB 761153 c.1347G>T synonymous_variant 0.24
rpoB 761168 c.1362C>G synonymous_variant 0.26
rpoB 761180 c.1374A>C synonymous_variant 0.22
rpoB 761183 c.1377T>G synonymous_variant 0.22
rpoB 761201 c.1395G>A synonymous_variant 0.26
rpoB 761204 c.1398C>G synonymous_variant 0.22
rpoB 761207 c.1401C>T synonymous_variant 0.22
rpoB 761234 c.1428G>C synonymous_variant 0.24
rpoB 761249 c.1443A>G synonymous_variant 0.27
rpoB 761255 c.1449T>G synonymous_variant 0.22
rpoB 761261 c.1455G>T synonymous_variant 0.21
rpoB 761273 c.1467T>C synonymous_variant 0.21
rpoB 761318 c.1512G>C synonymous_variant 0.14
rpoB 761327 c.1521A>G synonymous_variant 0.17
rpoB 761408 c.1602G>C synonymous_variant 0.16
rpoB 761471 c.1665C>G synonymous_variant 0.2
rpoB 761483 c.1677G>C synonymous_variant 0.19
rpoB 761492 c.1686G>C synonymous_variant 0.21
rpoB 761502 p.Pro566Ala missense_variant 0.16
rpoB 761537 c.1731C>G synonymous_variant 0.22
rpoB 761561 c.1755C>G synonymous_variant 0.17
rpoB 761564 c.1758G>C synonymous_variant 0.19
rpoB 761573 c.1767C>G synonymous_variant 0.19
rpoB 761579 c.1773G>C synonymous_variant 0.2
rpoB 761600 c.1794T>G synonymous_variant 0.2
rpoB 761603 c.1797C>T synonymous_variant 0.19
rpoB 761606 c.1800C>G synonymous_variant 0.19
rpoB 761612 c.1806G>T synonymous_variant 0.19
rpoB 761615 c.1809A>C synonymous_variant 0.19
rpoB 761636 c.1830G>T synonymous_variant 0.14
rpoB 761834 c.2028T>C synonymous_variant 0.15
rpoB 761954 c.2148C>G synonymous_variant 0.19
rpoB 761990 c.2184G>C synonymous_variant 0.29
rpoB 762008 c.2202C>G synonymous_variant 0.32
rpoB 762011 c.2205G>C synonymous_variant 0.31
rpoB 762017 c.2211A>G synonymous_variant 0.3
rpoB 762020 c.2214G>A synonymous_variant 0.31
rpoB 762024 p.Val740Ile missense_variant 0.29
rpoB 762053 c.2247T>C synonymous_variant 0.28
rpoB 762062 c.2256T>C synonymous_variant 0.32
rpoB 762065 c.2259T>C synonymous_variant 0.32
rpoB 762071 c.2265C>T synonymous_variant 0.32
rpoB 762083 c.2277T>C synonymous_variant 0.24
rpoB 762086 c.2280G>C synonymous_variant 0.24
rpoB 762114 p.Ile770Val missense_variant 0.36
rpoB 762119 c.2313C>T synonymous_variant 0.44
rpoB 762131 c.2325C>G synonymous_variant 0.39
rpoB 762134 c.2328C>G synonymous_variant 0.39
rpoB 762167 c.2361T>C synonymous_variant 0.39
rpoB 762185 c.2379G>C synonymous_variant 0.36
rpoB 762218 c.2412T>G synonymous_variant 0.16
rpoB 762338 c.2532T>C synonymous_variant 0.13
rpoC 762395 c.-975G>C upstream_gene_variant 0.19
rpoC 762398 c.-972T>C upstream_gene_variant 0.15
rpoC 762401 c.-969G>C upstream_gene_variant 0.17
rpoC 762404 c.-966T>C upstream_gene_variant 0.22
rpoC 762410 c.-960T>C upstream_gene_variant 0.24
rpoC 762416 c.-954A>G upstream_gene_variant 0.24
rpoC 762470 c.-900G>C upstream_gene_variant 0.16
rpoB 762486 p.Pro894Ala missense_variant 0.17
rpoB 762489 p.Val895Gln missense_variant 0.17
rpoB 762510 p.Ala902Pro missense_variant 0.17
rpoC 762518 c.-852C>G upstream_gene_variant 0.17
rpoC 762533 c.-837T>C upstream_gene_variant 0.14
rpoC 762536 c.-834T>C upstream_gene_variant 0.15
rpoC 762537 c.-833T>C upstream_gene_variant 0.15
rpoC 762776 c.-594C>T upstream_gene_variant 0.16
rpoC 762782 c.-588T>C upstream_gene_variant 0.17
rpoB 762799 p.Ala998Gly missense_variant 0.27
rpoC 762812 c.-558C>G upstream_gene_variant 0.21
rpoB 762813 p.Met1003Val missense_variant 0.21
rpoC 762827 c.-543G>C upstream_gene_variant 0.19
rpoC 762830 c.-540C>T upstream_gene_variant 0.18
rpoC 762857 c.-513C>G upstream_gene_variant 0.19
rpoC 762860 c.-510G>T upstream_gene_variant 0.19
rpoC 762899 c.-471G>C upstream_gene_variant 0.23
rpoC 762929 c.-441G>C upstream_gene_variant 0.29
rpoC 762995 c.-375G>C upstream_gene_variant 0.3
rpoC 763028 c.-342T>C upstream_gene_variant 0.25
rpoC 763031 c.-339T>G upstream_gene_variant 1.0
rpoC 763034 c.-336C>G upstream_gene_variant 0.26
rpoC 763040 c.-330C>G upstream_gene_variant 0.31
rpoC 763050 c.-320C>T upstream_gene_variant 0.43
rpoC 763070 c.-300T>C upstream_gene_variant 0.42
rpoC 763076 c.-294C>T upstream_gene_variant 0.43
rpoC 763085 c.-285C>G upstream_gene_variant 0.43
rpoC 763094 c.-276G>C upstream_gene_variant 0.42
rpoC 763115 c.-255T>C upstream_gene_variant 0.4
rpoC 763124 c.-246C>T upstream_gene_variant 0.37
rpoC 763127 c.-243G>C upstream_gene_variant 0.36
rpoC 763169 c.-201A>G upstream_gene_variant 0.21
rpoC 763375 c.6C>A synonymous_variant 0.17
rpoC 763408 c.39T>C synonymous_variant 0.19
rpoC 763411 c.42T>G synonymous_variant 0.19
rpoC 763414 c.45T>C synonymous_variant 0.18
rpoC 763430 c.61A>C synonymous_variant 0.29
rpoC 763435 c.66A>G synonymous_variant 0.28
rpoC 763444 c.75T>C synonymous_variant 0.33
rpoC 763456 c.87A>G synonymous_variant 0.57
rpoC 763468 c.99G>C synonymous_variant 0.75
rpoC 763486 c.117T>C synonymous_variant 0.68
rpoC 763505 c.136C>T synonymous_variant 0.55
rpoC 763561 c.192G>A synonymous_variant 0.27
rpoC 763606 c.237C>T synonymous_variant 0.16
rpoC 763633 c.264T>C synonymous_variant 0.2
rpoC 763636 c.267T>G synonymous_variant 0.21
rpoC 763639 c.270G>A synonymous_variant 0.2
rpoC 763658 c.289_291delCTTinsTTG synonymous_variant 0.18
rpoC 763666 c.297G>A synonymous_variant 0.22
rpoC 763696 c.327T>C synonymous_variant 0.33
rpoC 763699 c.330G>C synonymous_variant 0.32
rpoC 763702 c.333C>G synonymous_variant 0.32
rpoC 763708 c.339G>C synonymous_variant 0.31
rpoC 763714 c.345G>C synonymous_variant 0.33
rpoC 763717 c.348T>C synonymous_variant 0.35
rpoC 763732 c.363C>G synonymous_variant 0.27
rpoC 763735 c.366G>C synonymous_variant 0.26
rpoC 763744 c.375G>C synonymous_variant 0.29
rpoC 763765 c.396T>C synonymous_variant 0.29
rpoC 763771 c.402C>T synonymous_variant 0.32
rpoC 763781 p.Ser138Ala missense_variant 0.28
rpoC 763801 c.432C>G synonymous_variant 0.24
rpoC 763807 c.438T>C synonymous_variant 0.22
rpoC 763813 c.444C>G synonymous_variant 0.21
rpoC 763819 c.450G>C synonymous_variant 0.21
rpoC 763835 p.Ala156Met missense_variant 0.19
rpoC 763945 c.576T>C synonymous_variant 0.24
rpoC 763948 c.579G>C synonymous_variant 0.24
rpoC 763951 c.582G>A synonymous_variant 0.24
rpoC 763987 c.618C>T synonymous_variant 0.21
rpoC 764005 c.636G>C synonymous_variant 0.14
rpoC 764119 c.750G>A synonymous_variant 0.2
rpoC 764131 c.762T>C synonymous_variant 0.27
rpoC 764140 c.771C>T synonymous_variant 0.31
rpoC 764161 c.792G>C synonymous_variant 0.4
rpoC 764203 c.834G>C synonymous_variant 0.42
rpoC 764206 p.Asp279Glu missense_variant 0.44
rpoC 764217 p.Asn283Ser missense_variant 0.43
rpoC 764254 c.885G>C synonymous_variant 0.48
rpoC 764266 c.897T>C synonymous_variant 0.48
rpoC 764269 c.900G>C synonymous_variant 0.48
rpoC 764272 c.903G>T synonymous_variant 0.48
rpoC 764278 c.909A>G synonymous_variant 0.52
rpoC 764284 c.915G>C synonymous_variant 0.52
rpoC 764317 c.948C>T synonymous_variant 0.43
rpoC 764344 c.975C>T synonymous_variant 0.31
rpoC 764347 c.978G>C synonymous_variant 0.29
rpoC 764365 c.996C>T synonymous_variant 0.23
rpoC 764380 c.1011G>C synonymous_variant 0.17
rpoC 764381 c.1012_1013delTCinsAG synonymous_variant 0.17
rpoC 764387 c.1018T>C synonymous_variant 0.17
rpoC 764431 c.1062G>C synonymous_variant 0.16
rpoC 764434 c.1065A>G synonymous_variant 0.16
rpoC 764435 c.1066_1068delAGGinsCGA synonymous_variant 0.16
rpoC 764446 c.1077T>C synonymous_variant 0.19
rpoC 764449 c.1080G>C synonymous_variant 0.19
rpoC 764452 c.1083T>C synonymous_variant 0.2
rpoC 764458 c.1089G>C synonymous_variant 0.21
rpoC 764461 c.1092A>G synonymous_variant 0.29
rpoC 764497 c.1128A>G synonymous_variant 0.39
rpoC 764500 c.1131C>G synonymous_variant 0.33
rpoC 764503 c.1134G>C synonymous_variant 0.33
rpoC 764521 c.1152T>C synonymous_variant 0.36
rpoC 764524 c.1155C>A synonymous_variant 0.35
rpoC 764527 c.1158C>T synonymous_variant 0.35
rpoC 764533 c.1164C>T synonymous_variant 0.38
rpoC 764536 c.1167G>A synonymous_variant 0.36
rpoC 764539 c.1170C>G synonymous_variant 0.36
rpoC 764575 c.1206T>G synonymous_variant 0.36
rpoC 764576 c.1207_1208delTCinsAG synonymous_variant 0.36
rpoC 764587 c.1218C>G synonymous_variant 0.32
rpoC 764648 c.1279C>A synonymous_variant 0.38
rpoC 764653 c.1284G>C synonymous_variant 0.41
rpoC 764656 c.1287C>T synonymous_variant 0.43
rpoC 764668 c.1299C>T synonymous_variant 0.37
rpoC 764674 c.1305G>A synonymous_variant 0.43
rpoC 764681 c.1312C>T synonymous_variant 0.44
rpoC 764746 c.1377G>T synonymous_variant 0.43
rpoC 764752 c.1383G>C synonymous_variant 0.37
rpoC 764755 c.1386C>T synonymous_variant 0.36
rpoC 764764 c.1395T>C synonymous_variant 0.35
rpoC 764767 c.1398G>C synonymous_variant 0.33
rpoC 764791 c.1422C>G synonymous_variant 0.28
rpoC 764800 c.1431G>A synonymous_variant 0.23
rpoC 764803 c.1434C>T synonymous_variant 0.2
rpoC 764809 c.1440C>T synonymous_variant 0.22
rpoC 764815 c.1446A>G synonymous_variant 0.23
rpoC 764830 c.1461C>G synonymous_variant 0.21
rpoC 764833 c.1464A>G synonymous_variant 0.22
rpoC 764872 c.1503A>G synonymous_variant 0.26
rpoC 764875 c.1506C>A synonymous_variant 0.22
rpoC 764888 c.1519_1521delTTGinsCTC synonymous_variant 0.21
rpoC 764902 c.1533C>G synonymous_variant 0.21
rpoC 764911 c.1542A>G synonymous_variant 0.22
rpoC 764918 p.Val517Ile missense_variant 0.19
rpoC 764923 c.1554A>G synonymous_variant 0.18
rpoC 764932 c.1563C>G synonymous_variant 0.19
rpoC 764948 c.1579T>C synonymous_variant 0.17
rpoC 765451 c.2082C>G synonymous_variant 0.17
rpoC 765452 p.Ala695Ser missense_variant 0.16
rpoC 765752 p.Asp795Asn missense_variant 0.14
rpoC 765757 c.2388C>T synonymous_variant 0.17
rpoC 765784 c.2415C>G synonymous_variant 0.19
rpoC 765787 c.2418C>T synonymous_variant 0.19
rpoC 765790 c.2421C>T synonymous_variant 0.19
rpoC 765793 c.2424C>G synonymous_variant 0.21
rpoC 765796 c.2427C>T synonymous_variant 0.19
rpoC 765811 c.2442T>C synonymous_variant 0.17
rpoC 765814 c.2445A>G synonymous_variant 0.18
rpoC 765826 c.2457T>A synonymous_variant 0.22
rpoC 765835 c.2466C>T synonymous_variant 0.26
rpoC 765850 c.2481G>C synonymous_variant 0.23
rpoC 765883 c.2514C>G synonymous_variant 0.2
rpoC 765886 c.2517C>G synonymous_variant 0.19
rpoC 765892 c.2523T>C synonymous_variant 0.19
rpoC 765910 c.2541G>C synonymous_variant 0.21
rpoC 765934 c.2565C>T synonymous_variant 0.17
rpoC 765952 c.2583G>C synonymous_variant 0.2
rpoC 765967 c.2598C>T synonymous_variant 0.18
rpoC 765979 c.2610C>G synonymous_variant 0.18
rpoC 765994 c.2625A>T synonymous_variant 0.16
rpoC 765997 c.2628T>C synonymous_variant 0.16
rpoC 766255 c.2886G>T synonymous_variant 0.15
rpoC 766270 c.2901G>C synonymous_variant 0.22
rpoC 766274 p.Ala969Thr missense_variant 0.21
rpoC 766280 p.Ser971Gly missense_variant 0.24
rpoC 766300 c.2931C>G synonymous_variant 0.31
rpoC 766303 c.2934C>T synonymous_variant 0.31
rpoC 766306 c.2937C>T synonymous_variant 0.3
rpoC 766312 c.2943T>C synonymous_variant 0.31
rpoC 766315 c.2946C>G synonymous_variant 0.3
rpoC 766324 c.2955C>T synonymous_variant 0.35
rpoC 766351 c.2982C>G synonymous_variant 0.4
rpoC 766360 c.2991C>T synonymous_variant 0.37
rpoC 766381 c.3012C>T synonymous_variant 0.39
rpoC 766384 c.3015A>G synonymous_variant 0.39
rpoC 766387 c.3018C>G synonymous_variant 0.38
rpoC 766393 c.3024C>G synonymous_variant 0.31
rpoC 766397 c.3028C>T synonymous_variant 0.31
rpoC 766408 c.3039C>T synonymous_variant 0.34
rpoC 766417 c.3048C>T synonymous_variant 0.34
rpoC 766426 c.3057C>T synonymous_variant 0.35
rpoC 766483 c.3114G>C synonymous_variant 0.22
rpoC 766486 c.3117A>G synonymous_variant 0.23
rpoC 766492 c.3123T>C synonymous_variant 0.22
rpoC 766495 c.3126C>T synonymous_variant 0.22
rpoC 766519 c.3150C>A synonymous_variant 0.22
rpoC 766528 c.3159T>C synonymous_variant 0.17
rpoC 766534 c.3165C>G synonymous_variant 0.21
rpoC 766537 c.3168G>A synonymous_variant 0.21
rpoC 766543 c.3174C>T synonymous_variant 0.21
rpoC 766549 c.3180G>T synonymous_variant 0.19
rpoC 766570 c.3201T>G synonymous_variant 0.15
rpoC 766573 c.3204T>C synonymous_variant 0.15
rpoC 766583 p.Gly1072Ser missense_variant 0.17
rpoC 766591 c.3222A>G synonymous_variant 0.17
rpoC 766594 c.3225G>C synonymous_variant 0.21
rpoC 766597 c.3228C>G synonymous_variant 0.23
rpoC 766607 p.Ile1080Leu missense_variant 0.17
rpoC 766621 c.3252G>A synonymous_variant 0.16
rpoC 766645 p.Glu1092Asp missense_variant 1.0
rpoC 766747 c.3378C>T synonymous_variant 0.16
rpoC 766765 c.3396A>C synonymous_variant 0.16
rpoC 766774 c.3405T>C synonymous_variant 0.21
rpoC 766792 c.3423C>G synonymous_variant 0.22
rpoC 766795 c.3426C>T synonymous_variant 0.24
rpoC 766801 c.3432C>T synonymous_variant 0.27
rpoC 766804 c.3435A>G synonymous_variant 0.28
rpoC 766843 c.3474T>G synonymous_variant 0.26
rpoC 766864 c.3495G>C synonymous_variant 0.24
rpoC 766894 c.3525T>C synonymous_variant 0.22
rpoC 766895 c.3526T>C synonymous_variant 0.17
rpoC 766900 c.3531T>C synonymous_variant 0.17
rpoC 766907 c.3538C>T synonymous_variant 0.16
rpoC 766918 c.3549C>T synonymous_variant 0.21
rpoC 766921 c.3552G>C synonymous_variant 0.2
rpoC 766933 c.3564A>G synonymous_variant 0.24
rpoC 766945 c.3576A>G synonymous_variant 0.19
rpoC 767033 c.3664_3666delTCGinsAGT synonymous_variant 0.17
rpoC 767059 c.3690T>G synonymous_variant 0.3
rpoC 767062 c.3693C>A synonymous_variant 0.32
rpoC 767098 c.3729T>C synonymous_variant 0.25
rpoC 767119 c.3750A>G synonymous_variant 0.29
rpoC 767167 c.3798C>T synonymous_variant 0.33
rpoC 767180 p.Ala1271Gln missense_variant 0.3
rpoC 767185 c.3816G>T synonymous_variant 0.32
rpoC 767191 c.3822C>G synonymous_variant 0.31
rpoC 767200 c.3831G>A synonymous_variant 0.29
rpoC 767206 c.3837C>A synonymous_variant 0.21
rpoC 767209 c.3840T>G synonymous_variant 0.21
rpoC 767212 c.3843G>C synonymous_variant 0.2
rpoC 767221 c.3852C>G synonymous_variant 0.25
rpoC 767233 c.3864T>C synonymous_variant 0.23
rpoC 767263 c.3894T>C synonymous_variant 0.15
mmpL5 775639 p.Ile948Val missense_variant 1.0
mmpL5 776100 p.Thr794Ile missense_variant 1.0
mmpL5 776182 p.Asp767Asn missense_variant 0.97
mmpS5 779615 c.-710C>G upstream_gene_variant 1.0
rpsL 781395 c.-165T>C upstream_gene_variant 0.97
rpsL 781586 c.27C>A synonymous_variant 0.16
rpsL 781608 p.Ser17Ala missense_variant 0.19
rpsL 781628 c.69T>C synonymous_variant 0.24
rpsL 781631 c.72G>C synonymous_variant 0.24
rpsL 781649 c.90T>C synonymous_variant 0.3
rpsL 781655 c.96T>C synonymous_variant 0.24
rpsL 781658 c.99A>G synonymous_variant 0.2
rpsL 781664 c.105C>T synonymous_variant 0.22
rpsL 781667 c.108C>G synonymous_variant 0.23
rpsL 781709 c.150G>C synonymous_variant 0.2
rpsL 781715 c.156T>C synonymous_variant 0.22
rpsL 781718 c.159C>G synonymous_variant 0.22
rpsL 781721 c.162C>G synonymous_variant 0.22
rpsL 781728 c.169T>C synonymous_variant 0.19
rpsL 781742 c.183C>T synonymous_variant 0.16
rpsL 781760 c.201T>C synonymous_variant 0.2
rpsL 781808 c.249C>T synonymous_variant 0.18
rpsL 781832 c.273T>C synonymous_variant 0.22
rpsL 781841 c.282C>G synonymous_variant 0.17
rpsL 781868 c.309T>C synonymous_variant 0.15
rpsL 781892 c.333A>G synonymous_variant 0.21
rpsL 781898 c.339A>T synonymous_variant 0.2
rpsL 781916 c.357T>C synonymous_variant 0.16
rpsL 781929 p.Gly124Ser missense_variant 0.16
rplC 800618 c.-191T>C upstream_gene_variant 0.15
rplC 800648 c.-161A>C upstream_gene_variant 0.21
rplC 800797 c.-12T>G upstream_gene_variant 0.16
rplC 800799 c.-10G>C upstream_gene_variant 0.16
rplC 800800 c.-9G>T upstream_gene_variant 0.16
rplC 800801 c.-8A>G upstream_gene_variant 0.16
rplC 800817 c.9A>C synonymous_variant 0.21
rplC 800844 c.36T>C synonymous_variant 0.24
rplC 800865 c.57A>G synonymous_variant 0.3
rplC 800867 p.Ser20Asn missense_variant 0.29
rplC 800877 c.69A>C synonymous_variant 0.3
rplC 800907 c.99C>G synonymous_variant 0.29
rplC 800913 c.105G>C synonymous_variant 0.28
rplC 800916 c.108A>T synonymous_variant 0.28
rplC 800922 c.114C>G synonymous_variant 0.26
rplC 800934 c.126C>G synonymous_variant 0.23
rplC 800937 c.129A>G synonymous_variant 0.23
rplC 800946 c.138T>G synonymous_variant 0.23
rplC 800949 c.141T>C synonymous_variant 0.23
rplC 800955 c.147C>G synonymous_variant 0.21
rplC 800958 c.150G>A synonymous_variant 0.21
rplC 801201 c.393C>T synonymous_variant 0.19
rplC 801210 c.402T>C synonymous_variant 0.18
rplC 801216 c.408C>A synonymous_variant 0.18
rplC 801219 c.411C>T synonymous_variant 0.19
rplC 801220 p.Ser138Ala missense_variant 0.19
rplC 801246 c.438C>G synonymous_variant 0.33
rplC 801252 c.444G>C synonymous_variant 0.3
rplC 801267 c.459A>T synonymous_variant 0.27
rplC 801276 c.468G>C synonymous_variant 0.28
rplC 801297 c.489C>T synonymous_variant 0.24
rplC 801312 c.504G>C synonymous_variant 0.24
fbiC 1303681 c.751_753delTTGinsCTC synonymous_variant 0.18
fbiC 1303689 c.759T>C synonymous_variant 0.18
fbiC 1303695 c.765T>C synonymous_variant 0.17
fbiC 1303704 c.774T>C synonymous_variant 0.15
fbiC 1304142 c.1212G>C synonymous_variant 0.17
fbiC 1304163 c.1233G>C synonymous_variant 0.19
fbiC 1304164 p.Gly412Arg missense_variant 0.18
fbiC 1304172 c.1242G>T synonymous_variant 0.15
fbiC 1304174 p.Val415Ala missense_variant 0.16
fbiC 1304178 c.1248G>C synonymous_variant 0.17
fbiC 1304181 c.1251G>T synonymous_variant 0.17
fbiC 1304184 c.1254G>C synonymous_variant 0.18
fbiC 1304202 c.1272G>C synonymous_variant 0.17
fbiC 1304205 c.1275C>G synonymous_variant 0.17
fbiC 1304208 c.1278C>T synonymous_variant 0.18
fbiC 1304217 p.Asn429Lys missense_variant 0.16
fbiC 1304546 p.Val539Ala missense_variant 0.24
fbiC 1304556 c.1626C>T synonymous_variant 0.18
fbiC 1304559 p.Glu543Asp missense_variant 0.19
fbiC 1304565 c.1635C>G synonymous_variant 0.27
fbiC 1304580 c.1650T>C synonymous_variant 0.23
fbiC 1304598 c.1668C>T synonymous_variant 0.24
fbiC 1304613 c.1683T>C synonymous_variant 0.24
fbiC 1304625 c.1695C>T synonymous_variant 0.26
fbiC 1304628 c.1698G>C synonymous_variant 0.21
fbiC 1304649 c.1719C>T synonymous_variant 0.23
fbiC 1304658 c.1728C>G synonymous_variant 0.2
fbiC 1304661 c.1731C>T synonymous_variant 0.2
fbiC 1304675 p.Gly582Asp missense_variant 0.15
fbiC 1304679 c.1749G>A synonymous_variant 0.17
fbiC 1304691 c.1761G>C synonymous_variant 0.16
fbiC 1304703 c.1773C>T synonymous_variant 0.15
fbiC 1304715 c.1785G>T synonymous_variant 0.18
fbiC 1304724 c.1794A>G synonymous_variant 0.15
fbiC 1304742 c.1812T>C synonymous_variant 0.16
fbiC 1304751 c.1821C>G synonymous_variant 0.19
fbiC 1304757 c.1827A>G synonymous_variant 0.2
fbiC 1304958 c.2028T>G synonymous_variant 0.19
Rv1258c 1406760 c.580_581insC frameshift_variant 1.0
embR 1416850 c.498G>C synonymous_variant 0.17
embR 1416856 c.492G>C synonymous_variant 0.18
embR 1416862 c.486T>C synonymous_variant 0.18
embR 1416865 p.Pro161Ala missense_variant 0.18
embR 1416868 p.Glu160Asn missense_variant 0.19
atpE 1461185 c.141G>A synonymous_variant 0.17
rrs 1471659 n.-187C>T upstream_gene_variant 1.0
rrs 1471935 n.90T>C non_coding_transcript_exon_variant 0.14
rrs 1471969 n.124T>C non_coding_transcript_exon_variant 0.18
rrs 1471970 n.125G>A non_coding_transcript_exon_variant 0.18
rrs 1471984 n.139T>A non_coding_transcript_exon_variant 0.18
rrs 1471985 n.140T>C non_coding_transcript_exon_variant 0.18
rrs 1472030 n.185G>T non_coding_transcript_exon_variant 0.28
rrs 1472031 n.186G>T non_coding_transcript_exon_variant 0.27
rrs 1472033 n.188A>G non_coding_transcript_exon_variant 0.27
rrs 1472034 n.189T>C non_coding_transcript_exon_variant 0.26
rrs 1472040 n.195T>C non_coding_transcript_exon_variant 0.28
rrs 1472053 n.211_212delGC non_coding_transcript_exon_variant 0.3
rrs 1472061 n.216A>T non_coding_transcript_exon_variant 0.33
rrs 1472075 n.230A>G non_coding_transcript_exon_variant 0.44
rrs 1472969 n.1124A>G non_coding_transcript_exon_variant 0.36
rrs 1472970 n.1125C>G non_coding_transcript_exon_variant 0.36
rrs 1472977 n.1132G>C non_coding_transcript_exon_variant 0.35
rrs 1472978 n.1133T>C non_coding_transcript_exon_variant 0.38
rrl 1473541 n.-117G>A upstream_gene_variant 0.19
rrl 1473542 n.-116C>T upstream_gene_variant 0.19
rrl 1473571 n.-87C>T upstream_gene_variant 0.29
rrl 1473635 n.-23_-22insTTT upstream_gene_variant 0.2
rrl 1473731 n.74T>A non_coding_transcript_exon_variant 0.36
rrl 1473806 n.149C>T non_coding_transcript_exon_variant 0.42
rrl 1473877 n.220G>A non_coding_transcript_exon_variant 0.23
rrl 1473887 n.230T>A non_coding_transcript_exon_variant 0.21
rrl 1473888 n.231T>A non_coding_transcript_exon_variant 0.21
rrl 1473898 n.241C>T non_coding_transcript_exon_variant 0.22
rrl 1473986 n.329T>C non_coding_transcript_exon_variant 0.25
rrl 1473995 n.338G>T non_coding_transcript_exon_variant 0.28
rrl 1474009 n.352A>G non_coding_transcript_exon_variant 0.22
rrl 1474034 n.377G>A non_coding_transcript_exon_variant 0.25
rrl 1474083 n.426C>T non_coding_transcript_exon_variant 0.17
rrl 1474103 n.446A>T non_coding_transcript_exon_variant 0.22
rrl 1474140 n.483C>T non_coding_transcript_exon_variant 0.25
rrl 1474151 n.494C>T non_coding_transcript_exon_variant 0.24
rrl 1474201 n.544T>A non_coding_transcript_exon_variant 0.32
rrl 1474632 n.975G>T non_coding_transcript_exon_variant 0.29
rrl 1474639 n.982G>A non_coding_transcript_exon_variant 0.41
rrl 1474673 n.1016T>C non_coding_transcript_exon_variant 0.41
rrl 1474717 n.1060A>T non_coding_transcript_exon_variant 0.39
rrl 1474794 n.1137C>A non_coding_transcript_exon_variant 0.36
rrl 1474831 n.1174A>G non_coding_transcript_exon_variant 0.29
rrl 1474950 n.1293G>A non_coding_transcript_exon_variant 0.29
rrl 1474952 n.1296_1300delCATCC non_coding_transcript_exon_variant 0.31
rrl 1474961 n.1304T>G non_coding_transcript_exon_variant 0.29
rrl 1474962 n.1305T>C non_coding_transcript_exon_variant 0.26
rrl 1474963 n.1306G>A non_coding_transcript_exon_variant 0.25
rrl 1474964 n.1307T>A non_coding_transcript_exon_variant 0.25
rrl 1474967 n.1311_1315delGGGTG non_coding_transcript_exon_variant 0.28
rrl 1475005 n.1348C>T non_coding_transcript_exon_variant 0.35
rrl 1475006 n.1349A>G non_coding_transcript_exon_variant 0.35
rrl 1475028 n.1371G>A non_coding_transcript_exon_variant 0.33
rrl 1475061 n.1404C>T non_coding_transcript_exon_variant 0.32
rrl 1475213 n.1556C>T non_coding_transcript_exon_variant 0.23
rrl 1475266 n.1609T>C non_coding_transcript_exon_variant 0.25
rrl 1475273 n.1616T>G non_coding_transcript_exon_variant 0.3
rrl 1475289 n.1632G>A non_coding_transcript_exon_variant 0.31
rrl 1475290 n.1633A>G non_coding_transcript_exon_variant 0.31
rrl 1475291 n.1634A>C non_coding_transcript_exon_variant 0.31
rrl 1475315 n.1658A>T non_coding_transcript_exon_variant 0.24
rrl 1475333 n.1676T>C non_coding_transcript_exon_variant 0.25
rrl 1475355 n.1698C>T non_coding_transcript_exon_variant 0.24
rrl 1475369 n.1712G>A non_coding_transcript_exon_variant 0.19
rrl 1475608 n.1951T>C non_coding_transcript_exon_variant 0.3
rrl 1475638 n.1981C>T non_coding_transcript_exon_variant 0.35
rrl 1475659 n.2002G>A non_coding_transcript_exon_variant 0.27
rrl 1475988 n.2331A>G non_coding_transcript_exon_variant 0.33
rrl 1476035 n.2378G>A non_coding_transcript_exon_variant 0.47
rrl 1476049 n.2392C>T non_coding_transcript_exon_variant 0.44
rrl 1476086 n.2429G>A non_coding_transcript_exon_variant 0.34
rrl 1476089 n.2432T>C non_coding_transcript_exon_variant 0.33
rrl 1476095 n.2438C>G non_coding_transcript_exon_variant 0.33
rrl 1476115 n.2458T>C non_coding_transcript_exon_variant 0.29
rrl 1476117 n.2460G>C non_coding_transcript_exon_variant 0.26
rrl 1476299 n.2642C>T non_coding_transcript_exon_variant 0.15
rrl 1476529 n.2872A>G non_coding_transcript_exon_variant 0.42
rrl 1476580 n.2923G>A non_coding_transcript_exon_variant 0.45
rrl 1476597 n.2940G>A non_coding_transcript_exon_variant 0.44
rrl 1476619 n.2962C>T non_coding_transcript_exon_variant 0.38
rrl 1476628 n.2971T>A non_coding_transcript_exon_variant 0.35
rrl 1476679 n.3022T>C non_coding_transcript_exon_variant 0.35
inhA 1673493 c.-709C>T upstream_gene_variant 0.17
inhA 1673499 c.-703T>C upstream_gene_variant 0.17
inhA 1673505 c.-697A>T upstream_gene_variant 0.18
inhA 1673517 c.-685G>A upstream_gene_variant 0.19
inhA 1673535 c.-667A>G upstream_gene_variant 0.16
inhA 1673568 c.-634C>G upstream_gene_variant 0.16
inhA 1673574 c.-628C>G upstream_gene_variant 0.14
inhA 1673664 c.-538A>C upstream_gene_variant 0.2
inhA 1673667 c.-535A>G upstream_gene_variant 0.2
inhA 1673679 c.-523T>G upstream_gene_variant 0.28
inhA 1673682 c.-520G>C upstream_gene_variant 0.28
inhA 1673685 c.-517C>T upstream_gene_variant 0.26
fabG1 1673710 p.Leu91Val missense_variant 0.24
inhA 1673715 c.-487C>T upstream_gene_variant 0.23
inhA 1673724 c.-478A>G upstream_gene_variant 0.24
inhA 1673730 c.-472C>G upstream_gene_variant 0.24
fabG1 1673733 p.Met98Ile missense_variant 0.22
inhA 1673736 c.-466G>A upstream_gene_variant 0.22
inhA 1673745 c.-457G>A upstream_gene_variant 0.21
inhA 1673748 c.-454A>G upstream_gene_variant 0.21
fabG1 1673749 p.Lys104Arg missense_variant 0.21
fabG1 1673767 p.Asn110Asp missense_variant 0.15
inhA 1673916 c.-286A>T upstream_gene_variant 0.21
inhA 1673919 c.-283G>C upstream_gene_variant 0.19
inhA 1673922 c.-280T>C upstream_gene_variant 0.19
inhA 1673925 c.-277C>G upstream_gene_variant 0.21
inhA 1673946 c.-256C>A upstream_gene_variant 0.17
inhA 1673955 c.-247G>C upstream_gene_variant 0.16
fabG1 1673960 p.Ala174Val missense_variant 0.17
inhA 1673970 c.-232C>G upstream_gene_variant 0.16
inhA 1673976 c.-226T>C upstream_gene_variant 0.16
inhA 1673982 c.-220G>C upstream_gene_variant 0.18
inhA 1673988 c.-214G>C upstream_gene_variant 0.18
inhA 1673991 c.-211C>G upstream_gene_variant 0.21
inhA 1674015 c.-187C>A upstream_gene_variant 0.2
inhA 1674018 c.-184G>C upstream_gene_variant 0.21
inhA 1674024 c.-178T>C upstream_gene_variant 0.17
inhA 1674033 c.-169T>C upstream_gene_variant 0.16
inhA 1674045 c.-157G>A upstream_gene_variant 0.17
inhA 1674054 c.-148T>C upstream_gene_variant 0.15
inhA 1674060 c.-142A>G upstream_gene_variant 0.16
inhA 1674675 c.474C>T synonymous_variant 0.2
inhA 1674703 c.502T>C synonymous_variant 0.18
inhA 1674718 c.517A>C synonymous_variant 0.21
inhA 1674729 c.528G>C synonymous_variant 0.27
inhA 1674756 c.555T>C synonymous_variant 0.2
inhA 1674762 c.561T>C synonymous_variant 0.21
inhA 1674774 c.573A>C synonymous_variant 0.21
inhA 1674777 c.576C>G synonymous_variant 0.19
inhA 1674780 c.579T>G synonymous_variant 0.18
inhA 1674799 p.Ser200Gly missense_variant 0.15
inhA 1674822 c.621C>G synonymous_variant 0.16
inhA 1674903 c.702T>C synonymous_variant 0.14
inhA 1674904 p.Ala235Pro missense_variant 0.14
rpsA 1833554 p.Thr5Ala missense_variant 0.4
rpsA 1833589 c.48A>T synonymous_variant 0.47
rpsA 1833593 p.Ser18Thr missense_variant 0.47
rpsA 1833604 c.63C>T synonymous_variant 0.5
rpsA 1833610 c.69C>A synonymous_variant 0.5
rpsA 1833661 c.120A>G synonymous_variant 0.41
rpsA 1833664 c.123C>A synonymous_variant 0.43
rpsA 1833694 c.153G>T synonymous_variant 0.31
rpsA 1833718 c.177C>T synonymous_variant 0.36
rpsA 1833724 c.183C>G synonymous_variant 0.38
rpsA 1833727 c.186G>C synonymous_variant 0.38
rpsA 1833742 c.201A>G synonymous_variant 0.37
rpsA 1833745 c.204G>C synonymous_variant 0.38
rpsA 1833754 c.213G>A synonymous_variant 0.4
rpsA 1833802 c.261A>G synonymous_variant 0.41
rpsA 1833841 c.300C>G synonymous_variant 0.39
rpsA 1833847 c.306C>G synonymous_variant 0.37
rpsA 1833850 c.309C>G synonymous_variant 0.38
rpsA 1833856 c.315A>G synonymous_variant 0.45
rpsA 1833874 c.333T>C synonymous_variant 0.41
rpsA 1833928 c.387G>C synonymous_variant 0.3
rpsA 1833949 c.408T>C synonymous_variant 0.31
rpsA 1833979 c.438T>C synonymous_variant 0.38
rpsA 1834000 c.459G>C synonymous_variant 0.5
rpsA 1834015 c.474G>C synonymous_variant 0.5
rpsA 1834024 c.483G>A synonymous_variant 0.5
rpsA 1834030 c.489C>G synonymous_variant 0.45
rpsA 1834051 c.510G>A synonymous_variant 0.38
rpsA 1834102 c.561T>G synonymous_variant 0.16
rpsA 1834135 c.594G>C synonymous_variant 0.19
rpsA 1834153 c.612T>C synonymous_variant 0.15
rpsA 1834154 p.Asn205His missense_variant 0.15
rpsA 1834162 c.621A>G synonymous_variant 0.16
rpsA 1834165 c.624A>G synonymous_variant 0.17
rpsA 1834174 c.633C>T synonymous_variant 0.18
rpsA 1834177 c.636A>C synonymous_variant 1.0
rpsA 1834186 c.645C>G synonymous_variant 0.25
rpsA 1834189 c.648G>C synonymous_variant 0.27
rpsA 1834195 c.654G>C synonymous_variant 0.33
rpsA 1834213 c.672G>C synonymous_variant 0.44
rpsA 1834222 c.681T>C synonymous_variant 0.39
rpsA 1834225 c.684C>G synonymous_variant 0.35
rpsA 1834249 c.708T>C synonymous_variant 0.38
rpsA 1834261 c.720A>G synonymous_variant 0.39
rpsA 1834264 c.723G>C synonymous_variant 0.4
rpsA 1834297 c.756C>T synonymous_variant 0.38
rpsA 1834303 c.762T>G synonymous_variant 0.38
rpsA 1834306 c.765T>C synonymous_variant 0.36
rpsA 1834336 c.795C>G synonymous_variant 0.33
rpsA 1834339 c.798C>T synonymous_variant 0.35
rpsA 1834348 c.807T>C synonymous_variant 0.36
rpsA 1834366 c.825A>G synonymous_variant 0.36
rpsA 1834369 c.828C>G synonymous_variant 0.36
rpsA 1834375 c.834G>A synonymous_variant 0.34
rpsA 1834396 c.855G>C synonymous_variant 0.28
rpsA 1834411 c.870T>C synonymous_variant 0.22
rpsA 1834417 c.876G>C synonymous_variant 0.24
rpsA 1834423 c.882G>C synonymous_variant 0.23
rpsA 1834451 c.910T>C synonymous_variant 0.26
rpsA 1834456 c.915T>G synonymous_variant 0.31
rpsA 1834468 c.927A>G synonymous_variant 0.25
rpsA 1834489 c.948T>C synonymous_variant 0.27
rpsA 1834495 c.954G>A synonymous_variant 0.26
rpsA 1834528 c.987T>C synonymous_variant 0.38
rpsA 1834546 c.1005T>C synonymous_variant 0.32
rpsA 1834633 c.1092A>G synonymous_variant 0.2
rpsA 1834639 c.1098T>C synonymous_variant 0.16
rpsA 1834690 c.1149T>C synonymous_variant 0.21
tlyA 1917972 c.33A>G synonymous_variant 1.0
ndh 2101732 c.1311T>C synonymous_variant 0.15
ndh 2101744 p.Asp433Glu missense_variant 0.15
ndh 2101765 c.1278C>G synonymous_variant 0.17
ndh 2101768 c.1275C>G synonymous_variant 0.17
ndh 2101774 c.1269T>C synonymous_variant 0.17
ndh 2101777 c.1266C>G synonymous_variant 0.17
ndh 2101783 c.1260T>C synonymous_variant 0.17
ndh 2101795 c.1248G>C synonymous_variant 0.16
ndh 2101804 c.1239T>G synonymous_variant 0.14
ndh 2101812 p.Ile411Val missense_variant 0.14
ndh 2101873 c.1170T>C synonymous_variant 0.12
ndh 2101899 p.Ile382Val missense_variant 0.15
ndh 2101912 c.1131G>C synonymous_variant 0.18
ndh 2101920 c.1123A>C synonymous_variant 0.18
ndh 2101924 c.1119T>G synonymous_variant 0.17
ndh 2101936 c.1107G>C synonymous_variant 0.25
ndh 2101939 c.1104A>G synonymous_variant 0.25
ndh 2101960 c.1083A>C synonymous_variant 0.21
ndh 2101963 c.1080G>A synonymous_variant 0.18
ndh 2102247 p.Val266Ile missense_variant 0.19
ndh 2102263 c.780G>A synonymous_variant 0.22
ndh 2102287 c.756C>A synonymous_variant 0.32
ndh 2102302 c.741G>C synonymous_variant 0.32
ndh 2102317 c.726A>G synonymous_variant 0.36
ndh 2102328 p.Leu239Met missense_variant 0.15
ndh 2102989 c.54G>C synonymous_variant 0.16
katG 2154724 p.Arg463Leu missense_variant 1.0
katG 2155680 c.432G>C synonymous_variant 0.14
PPE35 2167926 p.Leu896Ser missense_variant 1.0
PPE35 2168762 c.1851A>G synonymous_variant 0.17
Rv1979c 2223293 c.-129A>G upstream_gene_variant 1.0
kasA 2517941 c.-174C>G upstream_gene_variant 0.21
kasA 2517956 c.-159G>A upstream_gene_variant 0.17
kasA 2518019 c.-96A>G upstream_gene_variant 0.16
kasA 2518025 c.-90G>C upstream_gene_variant 0.15
kasA 2518034 c.-81T>C upstream_gene_variant 0.15
kasA 2518035 c.-80C>G upstream_gene_variant 0.15
kasA 2518041 c.-74T>C upstream_gene_variant 0.14
kasA 2518046 c.-69C>G upstream_gene_variant 0.15
kasA 2518049 c.-66G>C upstream_gene_variant 0.15
kasA 2518248 p.Ala45Val missense_variant 0.26
kasA 2518252 c.138C>T synonymous_variant 0.26
kasA 2518279 c.165T>C synonymous_variant 0.28
kasA 2518283 p.Ala57Pro missense_variant 0.3
kasA 2518297 c.183C>T synonymous_variant 0.26
kasA 2518300 c.186T>C synonymous_variant 0.23
kasA 2518312 c.198T>C synonymous_variant 0.19
kasA 2518318 c.204C>G synonymous_variant 0.19
kasA 2518323 p.Ser70Asn missense_variant 0.15
kasA 2518439 p.Ala109Thr missense_variant 0.17
kasA 2518459 c.345T>C synonymous_variant 0.17
kasA 2518462 c.348A>C synonymous_variant 0.2
kasA 2518468 c.354A>G synonymous_variant 0.16
kasA 2518471 c.357C>G synonymous_variant 0.17
kasA 2518475 c.361A>C synonymous_variant 0.17
kasA 2518480 c.366T>C synonymous_variant 0.16
kasA 2518504 c.390T>C synonymous_variant 0.18
kasA 2518506 p.Ala131Glu missense_variant 0.18
kasA 2518513 c.399C>G synonymous_variant 0.21
kasA 2518519 c.405G>C synonymous_variant 0.23
kasA 2518534 c.420G>C synonymous_variant 0.17
kasA 2518537 c.423C>G synonymous_variant 0.17
kasA 2518561 c.447T>C synonymous_variant 0.2
kasA 2518567 c.453G>T synonymous_variant 0.18
kasA 2518573 c.459G>C synonymous_variant 0.18
kasA 2518574 p.Ile154Val missense_variant 0.23
kasA 2518588 c.474T>C synonymous_variant 0.26
kasA 2518591 c.477G>C synonymous_variant 0.25
kasA 2518618 c.504G>C synonymous_variant 0.15
kasA 2518633 c.519G>C synonymous_variant 0.17
kasA 2518642 c.528A>G synonymous_variant 0.21
kasA 2518645 c.531G>C synonymous_variant 0.21
kasA 2518648 c.534C>T synonymous_variant 0.21
kasA 2518672 c.558G>C synonymous_variant 0.19
kasA 2518681 c.567C>T synonymous_variant 0.19
kasA 2518684 c.570C>A synonymous_variant 0.16
kasA 2518711 c.597A>G synonymous_variant 0.17
kasA 2518714 c.600A>T synonymous_variant 0.21
kasA 2518735 c.621C>A synonymous_variant 0.19
kasA 2518744 c.630C>T synonymous_variant 0.18
kasA 2518747 c.633C>G synonymous_variant 0.19
kasA 2518756 c.642G>C synonymous_variant 0.29
kasA 2518783 c.669T>C synonymous_variant 0.29
kasA 2518789 c.675G>T synonymous_variant 0.29
kasA 2518795 c.681C>G synonymous_variant 0.29
kasA 2518798 c.684G>C synonymous_variant 0.26
kasA 2518816 c.702C>T synonymous_variant 0.2
kasA 2518822 c.708C>T synonymous_variant 0.17
kasA 2518855 c.741C>G synonymous_variant 0.15
kasA 2518856 p.Ile248Leu missense_variant 0.15
kasA 2518903 c.789C>T synonymous_variant 0.18
kasA 2518906 c.792A>G synonymous_variant 0.17
kasA 2518910 c.796C>T synonymous_variant 0.19
kasA 2518939 c.825T>C synonymous_variant 0.14
kasA 2518942 c.828T>C synonymous_variant 0.14
ahpC 2726348 c.156T>C synonymous_variant 0.21
ahpC 2726354 c.162G>C synonymous_variant 0.19
ahpC 2726357 c.165A>G synonymous_variant 0.19
ahpC 2726366 c.174G>C synonymous_variant 0.21
ahpC 2726378 c.186T>G synonymous_variant 0.21
ahpC 2726393 c.201G>C synonymous_variant 0.23
ahpC 2726397 p.Ser69Gly missense_variant 0.22
ahpC 2726408 c.216T>C synonymous_variant 0.24
ahpC 2726430 p.Ala80Thr missense_variant 0.23
ahpC 2726441 c.249G>C synonymous_variant 0.15
folC 2747059 c.540T>A synonymous_variant 0.17
folC 2747065 c.534C>T synonymous_variant 0.2
folC 2747071 c.528C>T synonymous_variant 0.19
folC 2747086 c.513A>C synonymous_variant 0.19
folC 2747089 c.510G>C synonymous_variant 0.18
folC 2747230 c.369C>G synonymous_variant 0.16
folC 2747263 c.336C>A synonymous_variant 0.19
folC 2747275 c.324T>C synonymous_variant 0.18
folC 2747278 c.321C>G synonymous_variant 0.19
folC 2747288 p.Pro104Val missense_variant 0.18
folC 2747290 c.309A>G synonymous_variant 0.18
folC 2747302 c.297A>G synonymous_variant 0.18
folC 2747442 c.157T>C synonymous_variant 0.19
folC 2747454 c.145C>A synonymous_variant 0.19
folC 2747467 p.Asp44Glu missense_variant 0.2
folC 2747491 c.108A>G synonymous_variant 0.23
folC 2747497 c.102C>G synonymous_variant 0.23
folC 2747500 c.99A>G synonymous_variant 0.22
folC 2747503 c.96T>C synonymous_variant 0.23
folC 2747509 c.90T>C synonymous_variant 0.24
folC 2747520 c.79C>T synonymous_variant 0.21
folC 2747521 c.78C>G synonymous_variant 0.22
folC 2747524 c.75G>T synonymous_variant 0.22
folC 2747539 c.60T>A synonymous_variant 0.19
pepQ 2859468 c.951G>T synonymous_variant 0.27
pepQ 2859489 p.Val310Ala missense_variant 0.55
pepQ 2859510 c.909T>C synonymous_variant 0.53
pepQ 2859528 c.891T>C synonymous_variant 0.35
pepQ 2859540 c.879A>T synonymous_variant 0.26
pepQ 2859546 c.873T>C synonymous_variant 0.19
pepQ 2859552 p.His289Asn missense_variant 0.18
pepQ 2859555 p.Glu288Asp missense_variant 0.17
pepQ 2859567 c.852C>G synonymous_variant 0.15
pepQ 2860236 c.183C>T synonymous_variant 0.19
pepQ 2860259 c.160T>C synonymous_variant 0.19
pepQ 2860263 c.156C>G synonymous_variant 0.19
pepQ 2860266 p.Asp51Glu missense_variant 0.19
pepQ 2860272 c.147G>A synonymous_variant 0.21
pepQ 2860275 c.144T>C synonymous_variant 0.23
pepQ 2860293 c.126A>G synonymous_variant 0.19
pepQ 2860314 c.105C>T synonymous_variant 0.2
pepQ 2860317 c.102A>C synonymous_variant 0.19
pepQ 2860397 p.Asp8His missense_variant 0.17
pepQ 2860423 c.-5G>C upstream_gene_variant 0.19
pepQ 2860447 c.-29A>G upstream_gene_variant 0.21
pepQ 2860448 c.-30C>A upstream_gene_variant 0.21
pepQ 2860475 c.-57C>T upstream_gene_variant 0.18
pepQ 2860476 c.-58A>G upstream_gene_variant 0.19
pepQ 2860480 c.-62G>A upstream_gene_variant 0.2
Rv2752c 3065217 c.975C>T synonymous_variant 0.16
Rv2752c 3065226 c.966G>A synonymous_variant 0.19
Rv2752c 3065229 c.963G>C synonymous_variant 0.2
Rv2752c 3065232 c.960T>C synonymous_variant 0.22
Rv2752c 3065241 c.951A>G synonymous_variant 0.22
Rv2752c 3065244 c.948G>T synonymous_variant 0.17
Rv2752c 3065556 c.636G>A synonymous_variant 0.17
Rv2752c 3065580 c.612G>C synonymous_variant 0.15
Rv2752c 3065595 p.Leu199Phe missense_variant 0.16
Rv2752c 3065612 p.Thr194Ala missense_variant 0.16
Rv2752c 3065625 c.567G>C synonymous_variant 0.18
Rv2752c 3065634 c.558G>C synonymous_variant 0.17
Rv2752c 3065637 c.555A>G synonymous_variant 0.17
Rv2752c 3065640 c.552T>C synonymous_variant 0.17
thyX 3067247 c.699C>A synonymous_variant 0.2
thyX 3067250 c.696G>C synonymous_variant 0.2
thyX 3067277 c.669C>A synonymous_variant 0.18
thyX 3067280 p.Val222Ser missense_variant 0.24
thyX 3067284 p.Ala221Asp missense_variant 0.25
thyX 3067292 c.654G>A synonymous_variant 0.17
thyX 3067295 c.651C>T synonymous_variant 0.21
thyX 3067304 c.642A>G synonymous_variant 0.29
thyX 3067316 c.630A>G synonymous_variant 0.3
thyX 3067325 c.621A>G synonymous_variant 0.31
thyX 3067331 c.615C>T synonymous_variant 0.29
thyX 3067355 c.591A>C synonymous_variant 0.29
thyX 3067373 c.573C>G synonymous_variant 0.24
thyX 3067391 c.555G>C synonymous_variant 0.21
thyX 3067394 c.552G>T synonymous_variant 0.21
thyX 3067784 c.162C>T synonymous_variant 0.14
thyX 3067814 c.132T>C synonymous_variant 0.15
thyX 3067817 c.129C>T synonymous_variant 0.16
thyX 3067820 c.126C>G synonymous_variant 0.15
thyX 3067832 c.114C>T synonymous_variant 0.14
thyA 3073977 c.495A>G synonymous_variant 0.17
thyA 3073989 c.483T>C synonymous_variant 0.23
thyA 3073997 c.475C>T synonymous_variant 0.25
thyA 3074004 c.468T>C synonymous_variant 0.27
thyA 3074031 c.441T>C synonymous_variant 0.29
thyA 3074037 c.435C>G synonymous_variant 0.31
thyA 3074045 c.427C>T synonymous_variant 0.3
thyA 3074053 p.Arg140Gln missense_variant 0.29
thyA 3074056 p.Glu139Pro missense_variant 0.29
thyA 3074061 p.Glu137Asp missense_variant 0.29
thyA 3074091 c.381C>G synonymous_variant 0.17
thyA 3074297 c.175C>T synonymous_variant 0.17
thyA 3074313 c.159A>G synonymous_variant 0.17
thyA 3074334 c.138T>C synonymous_variant 0.23
thyA 3074349 c.123T>C synonymous_variant 0.27
thyA 3074355 c.117G>C synonymous_variant 0.19
thyA 3074360 c.112T>C synonymous_variant 0.25
thyA 3074361 c.111T>C synonymous_variant 0.25
ald 3086788 c.-32T>C upstream_gene_variant 1.0
fprA 3473996 c.-11_-10insA upstream_gene_variant 1.0
fprA 3474138 c.132T>G synonymous_variant 0.15
Rv3236c 3612667 c.450T>G synonymous_variant 0.15
Rv3236c 3612805 c.312T>C synonymous_variant 0.21
Rv3236c 3612813 p.Thr102Ala missense_variant 0.77
Rv3236c 3612829 c.288T>C synonymous_variant 0.21
Rv3236c 3612835 c.282T>C synonymous_variant 0.27
Rv3236c 3612838 c.279G>C synonymous_variant 0.25
Rv3236c 3612850 c.267C>T synonymous_variant 0.23
Rv3236c 3612853 c.264C>T synonymous_variant 0.2
Rv3236c 3612856 c.261C>T synonymous_variant 0.19
Rv3236c 3612862 c.255T>C synonymous_variant 0.19
Rv3236c 3612883 c.234T>C synonymous_variant 0.18
Rv3236c 3612886 c.231T>C synonymous_variant 0.18
fbiA 3640365 c.-178C>G upstream_gene_variant 0.17
fbiA 3640416 c.-127G>T upstream_gene_variant 0.14
fbiA 3640541 c.-2A>G upstream_gene_variant 0.14
fbiB 3640560 c.-975G>C upstream_gene_variant 0.17
fbiA 3640562 p.Ala7Val missense_variant 0.16
fbiB 3640566 c.-969T>G upstream_gene_variant 0.16
fbiB 3640587 c.-948C>T upstream_gene_variant 0.14
fbiB 3640591 c.-944_-942delCTCinsTTG upstream_gene_variant 0.14
fbiB 3640606 c.-929C>T upstream_gene_variant 0.14
alr 3840248 c.1173C>A synonymous_variant 0.17
alr 3840272 c.1149C>G synonymous_variant 0.23
alr 3840275 c.1146T>G synonymous_variant 0.24
alr 3840332 c.1089G>C synonymous_variant 0.17
alr 3840416 p.Cys335Arg missense_variant 0.17
alr 3840422 c.997_999delAGAinsCGG synonymous_variant 0.17
alr 3840443 c.978G>C synonymous_variant 0.17
alr 3840446 c.975G>T synonymous_variant 0.16
rpoA 3877533 c.975C>G synonymous_variant 0.18
rpoA 3877557 c.951C>G synonymous_variant 0.15
rpoA 3877567 p.Ser314Thr missense_variant 0.19
rpoA 3877569 c.939G>C synonymous_variant 0.21
rpoA 3877575 c.933C>T synonymous_variant 0.19
rpoA 3877587 c.921A>G synonymous_variant 0.21
rpoA 3877593 c.915C>T synonymous_variant 0.16
rpoA 3877613 p.Ile299Val missense_variant 0.17
rpoA 3877620 c.888G>A synonymous_variant 0.21
rpoA 3877647 c.861C>A synonymous_variant 0.24
rpoA 3877656 c.852T>C synonymous_variant 0.23
rpoA 3877659 c.849G>A synonymous_variant 0.23
rpoA 3877668 c.840A>G synonymous_variant 0.27
rpoA 3877674 c.834C>T synonymous_variant 0.27
rpoA 3877679 p.Ala277Ser missense_variant 0.23
rpoA 3877680 c.828G>C synonymous_variant 0.23
rpoA 3877685 c.823C>T synonymous_variant 0.24
rpoA 3877689 c.819C>T synonymous_variant 0.24
rpoA 3877692 c.816G>C synonymous_variant 0.24
rpoA 3877704 c.804G>C synonymous_variant 0.3
rpoA 3877731 c.777G>T synonymous_variant 0.26
rpoA 3877734 c.774G>C synonymous_variant 0.28
rpoA 3877737 c.771G>T synonymous_variant 0.25
rpoA 3877743 c.765T>C synonymous_variant 0.24
rpoA 3877746 c.762G>C synonymous_variant 0.25
rpoA 3877752 c.756C>T synonymous_variant 0.27
rpoA 3877755 c.753C>A synonymous_variant 0.27
rpoA 3877764 c.744C>G synonymous_variant 0.21
rpoA 3877770 c.738A>G synonymous_variant 0.25
rpoA 3877776 c.732T>C synonymous_variant 0.24
rpoA 3877782 c.726T>C synonymous_variant 0.24
rpoA 3877830 c.678C>T synonymous_variant 0.26
rpoA 3877836 c.672A>G synonymous_variant 0.27
rpoA 3877839 c.669G>C synonymous_variant 0.29
rpoA 3877848 c.660C>T synonymous_variant 0.3
rpoA 3877875 c.633T>G synonymous_variant 0.32
rpoA 3877886 c.622C>T synonymous_variant 0.25
rpoA 3877896 c.612G>C synonymous_variant 0.22
rpoA 3877899 p.Ser203Thr missense_variant 0.22
rpoA 3877905 c.603A>G synonymous_variant 0.22
rpoA 3877909 p.Asn200Ser missense_variant 0.19
rpoA 3877926 c.582G>C synonymous_variant 0.19
rpoA 3877929 c.579C>T synonymous_variant 0.19
rpoA 3877950 c.558C>T synonymous_variant 0.22
rpoA 3877971 p.Asp179Glu missense_variant 0.27
rpoA 3877986 c.522G>C synonymous_variant 0.25
rpoA 3877989 c.519A>G synonymous_variant 0.28
rpoA 3878001 c.507A>G synonymous_variant 0.26
rpoA 3878022 c.486T>C synonymous_variant 0.29
rpoA 3878025 c.483C>T synonymous_variant 0.32
rpoA 3878028 c.480G>C synonymous_variant 0.32
rpoA 3878031 c.477T>C synonymous_variant 0.3
rpoA 3878043 c.465G>T synonymous_variant 0.32
rpoA 3878058 c.450G>C synonymous_variant 0.31
rpoA 3878061 c.447G>C synonymous_variant 0.32
rpoA 3878070 c.438T>C synonymous_variant 0.33
rpoA 3878085 c.423G>A synonymous_variant 0.37
rpoA 3878097 c.411G>A synonymous_variant 0.33
rpoA 3878100 c.408C>G synonymous_variant 0.33
rpoA 3878106 c.402G>C synonymous_variant 0.35
rpoA 3878118 c.390T>C synonymous_variant 0.29
rpoA 3878126 c.382C>T synonymous_variant 0.27
rpoA 3878127 c.381G>C synonymous_variant 0.26
rpoA 3878157 c.351C>G synonymous_variant 0.37
rpoA 3878163 c.345C>T synonymous_variant 0.37
rpoA 3878172 c.336G>C synonymous_variant 0.32
rpoA 3878193 c.315T>C synonymous_variant 0.34
rpoA 3878202 c.306G>C synonymous_variant 0.36
rpoA 3878211 c.297G>A synonymous_variant 0.38
rpoA 3878217 c.291A>G synonymous_variant 0.38
rpoA 3878247 c.261G>C synonymous_variant 0.37
rpoA 3878256 c.252G>C synonymous_variant 0.35
rpoA 3878262 c.246C>T synonymous_variant 0.33
rpoA 3878271 c.237T>C synonymous_variant 0.34
rpoA 3878283 p.Glu75Asp missense_variant 0.31
rpoA 3878292 c.216T>C synonymous_variant 0.29
rpoA 3878295 c.213A>G synonymous_variant 0.31
rpoA 3878298 c.210A>G synonymous_variant 0.28
rpoA 3878322 c.186A>G synonymous_variant 0.2
rpoA 3878442 p.Val22Thr missense_variant 0.17
rpoA 3878454 c.54A>G synonymous_variant 0.23
rpoA 3878472 p.Asp12Glu missense_variant 0.24
rpoA 3878478 c.30C>G synonymous_variant 0.25
rpoA 3878483 c.25C>T synonymous_variant 0.26
rpoA 3878490 c.18C>T synonymous_variant 0.27
rpoA 3878496 c.12A>T synonymous_variant 0.3
rpoA 3878512 c.-6_-5insGAA upstream_gene_variant 0.29
rpoA 3878672 c.-165A>T upstream_gene_variant 0.33
rpoA 3878680 c.-173C>T upstream_gene_variant 0.38
rpoA 3878698 c.-191A>C upstream_gene_variant 0.4
ddn 3986648 c.-196C>G upstream_gene_variant 0.22
ddn 3986657 c.-187C>G upstream_gene_variant 0.22
ddn 3986663 c.-181G>A upstream_gene_variant 0.21
ddn 3986667 c.-177_-176delCTinsAC upstream_gene_variant 0.21
ddn 3986696 c.-148G>T upstream_gene_variant 0.17
ddn 3986711 c.-133C>G upstream_gene_variant 0.22
ddn 3986930 c.87C>T synonymous_variant 0.15
ddn 3986933 c.90C>A synonymous_variant 0.16
ddn 3986941 p.Asp33Gly missense_variant 0.17
ddn 3986945 c.102G>C synonymous_variant 0.16
ddn 3986951 c.108T>C synonymous_variant 0.16
ddn 3986954 c.111G>C synonymous_variant 0.16
ddn 3986957 c.114C>T synonymous_variant 0.15
ddn 3986975 c.132T>C synonymous_variant 0.15
ddn 3986984 c.141G>T synonymous_variant 0.18
ddn 3987020 c.177G>A synonymous_variant 0.19
ddn 3987065 c.222T>C synonymous_variant 0.15
clpC1 4038271 p.Pro812Ala missense_variant 0.15
clpC1 4038302 c.2403C>G synonymous_variant 0.2
clpC1 4038308 c.2397G>C synonymous_variant 0.16
clpC1 4038314 c.2391T>G synonymous_variant 0.15
clpC1 4038436 p.Ala757Ser missense_variant 0.21
clpC1 4038444 p.Ala754Lys missense_variant 0.21
clpC1 4038446 c.2259T>C synonymous_variant 0.22
clpC1 4038456 p.Val750Glu missense_variant 0.24
clpC1 4038508 c.2197C>T synonymous_variant 0.31
clpC1 4038519 p.Arg729Gln missense_variant 0.34
clpC1 4038530 p.Glu725Asp missense_variant 0.32
clpC1 4038533 c.2172C>T synonymous_variant 0.3
clpC1 4038536 c.2169C>T synonymous_variant 0.31
clpC1 4038602 c.2103G>C synonymous_variant 0.14
clpC1 4038695 c.2010C>A synonymous_variant 0.17
clpC1 4038698 c.2007C>G synonymous_variant 0.17
clpC1 4038703 c.2002C>T synonymous_variant 0.15
clpC1 4038704 c.2001T>C synonymous_variant 0.16
clpC1 4038707 c.1998C>G synonymous_variant 0.16
clpC1 4038713 c.1992T>C synonymous_variant 0.2
clpC1 4038755 c.1950G>T synonymous_variant 0.22
clpC1 4038773 c.1932T>C synonymous_variant 0.32
clpC1 4038790 c.1915C>T synonymous_variant 0.24
clpC1 4038800 c.1905C>T synonymous_variant 0.24
clpC1 4038812 c.1893T>C synonymous_variant 0.23
clpC1 4038838 c.1867C>T synonymous_variant 0.2
clpC1 4038839 c.1866G>C synonymous_variant 0.2
clpC1 4038878 c.1827A>G synonymous_variant 0.2
clpC1 4038902 c.1803C>T synonymous_variant 0.15
clpC1 4038923 c.1782A>G synonymous_variant 0.16
clpC1 4038974 c.1731T>C synonymous_variant 0.15
clpC1 4038980 c.1725C>T synonymous_variant 0.15
clpC1 4038989 c.1716T>C synonymous_variant 0.17
clpC1 4038995 c.1710G>A synonymous_variant 0.21
clpC1 4039009 c.1696C>T synonymous_variant 0.26
clpC1 4039022 c.1683A>G synonymous_variant 0.25
clpC1 4039037 c.1668T>C synonymous_variant 0.26
clpC1 4039085 c.1620A>G synonymous_variant 0.36
clpC1 4039090 c.1615C>T synonymous_variant 0.38
clpC1 4039097 c.1608G>C synonymous_variant 0.38
clpC1 4039103 c.1602T>C synonymous_variant 0.28
clpC1 4039106 c.1599G>C synonymous_variant 0.28
clpC1 4039112 c.1593C>G synonymous_variant 0.32
clpC1 4039121 c.1584T>C synonymous_variant 0.27
clpC1 4039133 c.1572C>G synonymous_variant 0.21
clpC1 4039142 c.1563A>G synonymous_variant 0.22
clpC1 4039145 c.1560G>C synonymous_variant 0.22
clpC1 4039274 c.1431G>C synonymous_variant 0.15
clpC1 4039286 c.1419T>C synonymous_variant 0.15
clpC1 4039295 c.1410A>G synonymous_variant 0.16
clpC1 4039337 c.1368A>C synonymous_variant 0.21
clpC1 4039352 c.1353C>T synonymous_variant 0.21
clpC1 4039391 c.1314T>G synonymous_variant 0.19
clpC1 4039409 c.1296T>C synonymous_variant 0.19
clpC1 4039412 c.1293T>G synonymous_variant 0.19
clpC1 4039430 c.1275T>C synonymous_variant 0.19
clpC1 4039448 c.1257A>G synonymous_variant 0.16
clpC1 4039454 c.1251A>G synonymous_variant 0.16
clpC1 4039493 c.1212C>T synonymous_variant 0.15
clpC1 4039514 c.1191C>T synonymous_variant 0.15
clpC1 4039517 c.1188C>G synonymous_variant 0.16
clpC1 4039693 c.1012C>T synonymous_variant 0.27
clpC1 4039694 c.1011G>C synonymous_variant 0.27
clpC1 4039724 c.981A>G synonymous_variant 0.23
clpC1 4039733 c.972G>A synonymous_variant 0.22
clpC1 4039904 c.801A>G synonymous_variant 0.2
clpC1 4039928 c.775_777delAGCinsTCG synonymous_variant 0.17
clpC1 4039931 c.774T>C synonymous_variant 0.16
clpC1 4039942 c.763C>T synonymous_variant 0.18
clpC1 4039946 c.759A>G synonymous_variant 0.17
clpC1 4039952 c.753T>C synonymous_variant 0.18
clpC1 4039958 c.747G>C synonymous_variant 0.24
clpC1 4039991 c.714G>C synonymous_variant 0.22
clpC1 4039996 p.Glu237Gln missense_variant 0.2
clpC1 4040015 c.690G>C synonymous_variant 0.23
clpC1 4040018 c.687G>C synonymous_variant 0.21
clpC1 4040021 c.684A>C synonymous_variant 0.29
clpC1 4040033 c.672G>C synonymous_variant 0.31
clpC1 4040036 c.669C>G synonymous_variant 0.31
clpC1 4040048 c.657C>T synonymous_variant 0.31
clpC1 4040091 c.613_614delTCinsAG synonymous_variant 0.31
clpC1 4040093 c.612C>G synonymous_variant 0.31
clpC1 4040105 c.600C>G synonymous_variant 0.29
clpC1 4040147 c.558A>G synonymous_variant 0.19
clpC1 4040153 c.552A>G synonymous_variant 0.18
clpC1 4040300 c.405C>T synonymous_variant 0.17
clpC1 4040636 c.69C>G synonymous_variant 0.2
clpC1 4040644 c.61A>C synonymous_variant 0.17
clpC1 4040657 c.48T>G synonymous_variant 0.17
clpC1 4040674 c.31A>C synonymous_variant 0.16
embC 4239693 c.-170_-168delGCAinsACG upstream_gene_variant 0.17
embC 4240123 c.261C>G synonymous_variant 0.15
embC 4240128 p.Gln89Arg missense_variant 0.16
embC 4240150 c.288A>G synonymous_variant 0.18
embC 4240151 p.Ser97Pro missense_variant 0.18
embC 4240171 c.309G>C synonymous_variant 0.16
embC 4240175 c.313T>C synonymous_variant 0.15
embC 4240183 c.321A>G synonymous_variant 0.19
embC 4240780 c.918T>C synonymous_variant 0.17
embC 4240783 c.921G>C synonymous_variant 0.17
embC 4240795 c.933C>G synonymous_variant 0.16
embC 4240831 c.969T>C synonymous_variant 0.2
embC 4240858 c.996G>A synonymous_variant 0.16
embC 4241017 c.1155T>C synonymous_variant 0.18
embC 4241023 c.1161T>G synonymous_variant 0.17
embC 4241026 c.1164C>G synonymous_variant 0.22
embC 4241039 p.Asp393Asn missense_variant 0.18
embC 4241050 c.1188T>G synonymous_variant 0.18
embC 4241056 c.1194C>G synonymous_variant 0.21
embC 4241095 c.1233C>T synonymous_variant 0.36
embC 4241107 c.1245G>C synonymous_variant 0.3
embC 4241140 c.1278A>G synonymous_variant 0.18
embC 4241153 p.Ile431Leu missense_variant 0.2
embC 4241161 c.1299C>G synonymous_variant 0.16
embC 4241162 c.1300T>C synonymous_variant 0.16
embC 4241230 c.1368A>G synonymous_variant 0.19
embC 4241761 c.1899G>C synonymous_variant 0.17
embC 4241788 c.1926C>T synonymous_variant 0.24
embC 4241791 c.1929G>C synonymous_variant 0.25
embC 4241797 c.1935C>T synonymous_variant 0.25
embC 4241809 c.1947A>G synonymous_variant 0.17
embC 4241818 c.1956C>T synonymous_variant 0.15
embC 4241821 c.1959G>A synonymous_variant 0.16
embC 4242092 p.Leu744Val missense_variant 0.14
embC 4242106 c.2244C>G synonymous_variant 0.15
embA 4242505 c.-728G>A upstream_gene_variant 0.18
embA 4242643 c.-590C>T upstream_gene_variant 1.0
embA 4242823 c.-410G>C upstream_gene_variant 0.18
embA 4242838 c.-395C>G upstream_gene_variant 0.25
embA 4242844 c.-389A>G upstream_gene_variant 0.28
embA 4242847 c.-386C>A upstream_gene_variant 0.27
embA 4242859 c.-374C>T upstream_gene_variant 0.23
embC 4242863 p.Tyr1001Asn missense_variant 0.23
embA 4242871 c.-362C>T upstream_gene_variant 0.25
embC 4242873 p.Asp1004Val missense_variant 0.25
embA 4242883 c.-350C>G upstream_gene_variant 0.28
embC 4242885 p.Lys1008Thr missense_variant 0.29
embA 4243460 c.228C>T synonymous_variant 1.0
embA 4244120 c.888T>C synonymous_variant 0.16
embA 4244165 c.933T>G synonymous_variant 0.14
embA 4244170 p.Gln313Arg missense_variant 0.16
embA 4244178 p.Ala316Ser missense_variant 0.2
embA 4244198 c.966C>A synonymous_variant 0.22
embA 4244207 c.975C>G synonymous_variant 0.18
embA 4244213 c.981C>G synonymous_variant 0.19
embA 4244219 c.987C>G synonymous_variant 0.17
embA 4244228 c.996A>G synonymous_variant 0.15
embA 4244233 p.Ala334Gly missense_variant 0.15
embA 4244252 c.1020C>T synonymous_variant 0.14
embA 4244260 p.Val343Ala missense_variant 0.15
embA 4244340 p.Ser370Ala missense_variant 0.18
embA 4244345 c.1113C>G synonymous_variant 0.18
embA 4244856 p.Ala542Pro missense_variant 0.23
embA 4244885 c.1653A>G synonymous_variant 0.22
embA 4244897 c.1665T>G synonymous_variant 0.15
embA 4244921 c.1689C>G synonymous_variant 0.15
embA 4245083 c.1851A>C synonymous_variant 0.23
embA 4245101 c.1869G>C synonymous_variant 0.21
embA 4245110 c.1878C>T synonymous_variant 0.18
embA 4245149 c.1917C>G synonymous_variant 0.18
embA 4245224 c.1992T>C synonymous_variant 0.15
embB 4245620 c.-894T>C upstream_gene_variant 0.15
embB 4245623 c.-891G>A upstream_gene_variant 0.16
embB 4245662 c.-852G>C upstream_gene_variant 0.32
embB 4245674 c.-840A>T upstream_gene_variant 0.32
embB 4245677 c.-837G>C upstream_gene_variant 0.31
embB 4245683 c.-831C>T upstream_gene_variant 0.32
embA 4245693 p.Ile821Val missense_variant 0.38
embB 4245714 c.-800C>T upstream_gene_variant 0.43
embB 4245725 c.-789A>G upstream_gene_variant 0.4
embB 4245726 c.-788T>C upstream_gene_variant 0.4
embB 4245734 c.-780G>C upstream_gene_variant 0.33
embB 4245737 c.-777A>T upstream_gene_variant 0.31
embB 4245764 c.-750G>C upstream_gene_variant 0.24
embA 4245772 p.Asn847Thr missense_variant 0.25
embB 4245803 c.-711C>T upstream_gene_variant 0.25
embB 4245806 c.-708G>A upstream_gene_variant 0.24
embB 4245807 c.-707_-705delTTAinsCTG upstream_gene_variant 0.21
embB 4245812 c.-702G>T upstream_gene_variant 0.2
embA 4245813 p.Pro861Ala missense_variant 0.2
embA 4245822 p.Pro864Ala missense_variant 0.19
embB 4245839 c.-675G>C upstream_gene_variant 0.18
embA 4245843 p.Val871Ile missense_variant 0.14
embB 4245848 c.-666C>G upstream_gene_variant 0.17
embB 4245851 c.-663G>C upstream_gene_variant 0.17
embB 4245857 c.-657C>G upstream_gene_variant 0.17
embB 4245875 c.-639G>A upstream_gene_variant 0.19
embA 4245978 p.Ile916Leu missense_variant 0.21
embB 4245983 c.-531A>G upstream_gene_variant 0.24
embB 4245992 c.-522C>G upstream_gene_variant 0.28
embB 4246004 c.-510T>C upstream_gene_variant 0.33
embB 4246005 c.-509C>T upstream_gene_variant 0.33
embB 4246013 c.-501T>C upstream_gene_variant 0.32
embA 4246020 p.Ala930Thr missense_variant 0.32
embB 4246028 c.-486G>C upstream_gene_variant 0.32
embB 4246070 c.-444G>C upstream_gene_variant 0.37
embB 4246082 c.-432T>C upstream_gene_variant 0.29
embB 4246109 c.-405C>G upstream_gene_variant 0.32
embB 4246115 c.-399T>C upstream_gene_variant 0.33
embA 4246128 p.Ser966Thr missense_variant 0.25
embA 4246138 p.Arg969Gln missense_variant 0.18
embB 4246140 c.-374T>C upstream_gene_variant 0.18
embB 4246148 c.-366G>C upstream_gene_variant 0.18
embB 4246151 c.-363A>C upstream_gene_variant 0.18
embA 4246152 p.Ala974Arg missense_variant 0.18
embB 4246172 c.-342C>T upstream_gene_variant 0.24
embB 4246184 c.-330A>C upstream_gene_variant 0.36
embB 4246205 c.-309A>G upstream_gene_variant 0.24
embB 4246211 c.-303T>C upstream_gene_variant 0.21
embB 4246217 c.-297G>A upstream_gene_variant 0.22
embB 4246220 c.-294T>C upstream_gene_variant 0.23
embB 4246223 c.-291C>T upstream_gene_variant 0.23
embA 4246227 p.Ile999Val missense_variant 0.24
embB 4246235 c.-279G>A upstream_gene_variant 0.24
embB 4246244 c.-270G>A upstream_gene_variant 0.25
embA 4246254 p.Leu1008Met missense_variant 0.32
embB 4246259 c.-255G>C upstream_gene_variant 0.31
embB 4246265 c.-249C>T upstream_gene_variant 0.3
embB 4246268 c.-246G>A upstream_gene_variant 0.31
embA 4246279 p.Ala1016Val missense_variant 0.37
embB 4246292 c.-222A>G upstream_gene_variant 0.22
embB 4246307 c.-207G>C upstream_gene_variant 0.23
embB 4246316 c.-198T>C upstream_gene_variant 0.24
embB 4246346 c.-168C>G upstream_gene_variant 0.24
embA 4246359 p.Ala1043Ser missense_variant 0.16
embB 4246828 c.315A>G synonymous_variant 0.16
embB 4247440 c.927C>G synonymous_variant 0.16
embB 4247470 c.957T>C synonymous_variant 0.21
embB 4247497 c.984T>C synonymous_variant 0.21
embB 4247500 c.987C>G synonymous_variant 0.21
embB 4247512 c.999T>C synonymous_variant 0.28
embB 4247554 c.1041T>C synonymous_variant 0.27
embB 4247555 p.Leu348Ile missense_variant 0.28
embB 4247566 c.1053C>G synonymous_variant 0.26
embB 4247579 p.Ala356Phe missense_variant 0.26
embB 4247590 c.1077A>G synonymous_variant 0.25
embB 4247608 c.1095G>C synonymous_variant 0.23
embB 4247611 c.1098G>C synonymous_variant 0.21
embB 4247632 c.1119C>G synonymous_variant 0.2
embB 4247722 c.1209G>C synonymous_variant 0.16
embB 4247725 c.1212G>C synonymous_variant 0.16
embB 4247779 c.1266C>G synonymous_variant 0.14
embB 4247785 c.1272G>C synonymous_variant 0.18
embB 4247899 p.Met462Ile missense_variant 0.18
embB 4247911 p.Leu466Phe missense_variant 0.17
embB 4247915 p.Arg468Asn missense_variant 0.17
embB 4247920 c.1407T>C synonymous_variant 0.15
embB 4247923 c.1410T>C synonymous_variant 0.17
embB 4247932 c.1419C>G synonymous_variant 0.23
embB 4247948 p.Val479Leu missense_variant 0.29
embB 4247975 p.Val488Ile missense_variant 0.21
embB 4247989 c.1476G>C synonymous_variant 0.2
embB 4248001 c.1488C>T synonymous_variant 0.18
embB 4248007 c.1494C>G synonymous_variant 0.17
embB 4248042 p.Ala510Gly missense_variant 0.19
embB 4248052 c.1539G>T synonymous_variant 0.19
embB 4248055 c.1542G>C synonymous_variant 0.19
embB 4248058 c.1545C>T synonymous_variant 0.19
embB 4248061 c.1548G>A synonymous_variant 0.18
embB 4248064 c.1551G>C synonymous_variant 0.18
embB 4248070 c.1557T>C synonymous_variant 0.22
embB 4248094 c.1581C>T synonymous_variant 0.3
embB 4248130 c.1617G>C synonymous_variant 0.32
embB 4248142 c.1629T>C synonymous_variant 0.24
embB 4248143 c.1630T>C synonymous_variant 0.24
embB 4248154 c.1641G>T synonymous_variant 0.23
embB 4248157 c.1644A>T synonymous_variant 0.21
embB 4248163 c.1650G>A synonymous_variant 0.22
embB 4248169 c.1656C>T synonymous_variant 0.22
embB 4248175 c.1662G>A synonymous_variant 0.24
embB 4248178 c.1665C>T synonymous_variant 0.23
embB 4248206 p.Ser565Gly missense_variant 0.28
embB 4248214 c.1701C>G synonymous_variant 0.27
embB 4248217 c.1704C>G synonymous_variant 0.27
embB 4248220 c.1707A>G synonymous_variant 0.27
embB 4248233 c.1720C>T synonymous_variant 0.28
embB 4248252 p.Gly580Ala missense_variant 0.29
embB 4248266 c.1753C>T synonymous_variant 0.29
embB 4248277 c.1764G>C synonymous_variant 0.23
embB 4248280 c.1767C>G synonymous_variant 0.24
embB 4248424 c.1911G>A synonymous_variant 0.19
embB 4248430 c.1917T>C synonymous_variant 0.19
embB 4248448 c.1935C>T synonymous_variant 0.16
embB 4248457 c.1944T>C synonymous_variant 0.19
embB 4248472 c.1959T>C synonymous_variant 0.18
embB 4248496 c.1983G>C synonymous_variant 0.23
embB 4248504 p.Asp664Ala missense_variant 0.22
embB 4248508 c.1995G>A synonymous_variant 0.19
embB 4248514 c.2001A>G synonymous_variant 0.19
embB 4248682 c.2169G>C synonymous_variant 0.17
embB 4248697 c.2184A>C synonymous_variant 0.15
embB 4249568 p.Ser1019Asn missense_variant 0.19
embB 4249573 c.3060T>C synonymous_variant 0.23
embB 4249594 c.3081G>C synonymous_variant 0.21
embB 4249607 p.Thr1032Val missense_variant 0.17
embB 4249618 c.3105C>G synonymous_variant 0.19
embB 4249624 c.3111C>T synonymous_variant 0.19
embB 4249627 c.3114G>C synonymous_variant 0.18
embB 4249640 c.3127T>C synonymous_variant 0.22
embB 4249648 c.3135G>C synonymous_variant 0.22
embB 4249654 c.3141C>T synonymous_variant 0.14
embB 4249675 c.3162C>G synonymous_variant 0.25
embB 4249693 c.3180T>C synonymous_variant 0.33
embB 4249699 c.3186T>A synonymous_variant 0.33
embB 4249702 c.3189C>A synonymous_variant 0.33
embB 4249703 c.3190C>T synonymous_variant 0.33
embB 4249711 c.3198G>A synonymous_variant 0.41
embB 4249735 c.3222T>G synonymous_variant 0.44
embB 4249741 c.3228C>A synonymous_variant 0.4
embB 4249744 c.3231G>A synonymous_variant 0.31
embB 4249750 p.Glu1079Asp missense_variant 0.29
embB 4249751 c.3238T>C synonymous_variant 0.29
aftB 4267499 c.1338G>C synonymous_variant 0.16
aftB 4267510 p.Asn443Asp missense_variant 0.15
aftB 4267511 c.1326C>T synonymous_variant 0.15
aftB 4267529 c.1308T>C synonymous_variant 0.26
aftB 4267535 c.1302A>G synonymous_variant 0.26
aftB 4267556 c.1281G>C synonymous_variant 0.28
aftB 4267574 c.1263G>C synonymous_variant 0.18
aftB 4267580 c.1257G>A synonymous_variant 0.28
aftB 4267592 c.1245C>G synonymous_variant 0.26
aftB 4267622 p.Ser405Thr missense_variant 0.24
aftB 4267634 p.Arg401His missense_variant 0.21
aftB 4267637 c.1200C>G synonymous_variant 0.25
aftB 4267647 p.Asp397Gly missense_variant 0.73
aftB 4267649 c.1188T>C synonymous_variant 0.27
aftB 4267667 c.1170A>G synonymous_variant 0.22
aftB 4267670 c.1167G>A synonymous_variant 0.25
aftB 4267781 c.1056C>A synonymous_variant 0.22
aftB 4267785 p.Gly351Ala missense_variant 0.3
aftB 4267793 c.1044C>T synonymous_variant 0.3
aftB 4267802 c.1035T>C synonymous_variant 0.33
aftB 4267805 c.1032T>C synonymous_variant 0.33
aftB 4267808 c.1029G>C synonymous_variant 0.33
aftB 4267826 c.1011G>C synonymous_variant 0.36
aftB 4267838 c.999T>C synonymous_variant 0.57
aftB 4267841 c.996C>T synonymous_variant 0.57
aftB 4267856 c.981T>C synonymous_variant 0.71
aftB 4267879 p.Val320Leu missense_variant 0.5
aftB 4267891 p.Val316Ile missense_variant 0.33
aftB 4267892 p.Ile315Met missense_variant 0.33
aftB 4267898 c.939T>C synonymous_variant 0.33
aftB 4267907 c.930C>G synonymous_variant 0.22
aftB 4267912 p.Pro309Ala missense_variant 0.2
aftB 4267916 c.921T>C synonymous_variant 0.18
aftB 4267919 c.918A>G synonymous_variant 0.18
aftB 4267922 c.915G>A synonymous_variant 0.18
aftB 4267940 c.897T>G synonymous_variant 0.17
aftB 4268194 p.Leu215Val missense_variant 0.15
aftB 4268207 c.630C>G synonymous_variant 0.17
aftB 4268213 c.624T>C synonymous_variant 0.16
aftB 4268228 c.609C>G synonymous_variant 0.15
ubiA 4268956 p.Ala293Gly missense_variant 0.21
aftB 4268978 c.-142C>T upstream_gene_variant 0.34
aftB 4268994 c.-158T>C upstream_gene_variant 0.39
aftB 4269000 c.-164G>A upstream_gene_variant 0.39
aftB 4269006 c.-170T>C upstream_gene_variant 0.41
aftB 4269012 c.-176G>C upstream_gene_variant 0.39
aftB 4269027 c.-191C>G upstream_gene_variant 0.37
aftB 4269030 c.-194C>G upstream_gene_variant 0.39
aftB 4269033 c.-197T>C upstream_gene_variant 0.37
aftB 4269045 c.-209G>C upstream_gene_variant 0.37
aftB 4269177 c.-341G>A upstream_gene_variant 0.17
aftB 4269180 c.-344G>T upstream_gene_variant 0.19
aftB 4269195 c.-359C>T upstream_gene_variant 0.2
aftB 4269216 c.-380C>T upstream_gene_variant 0.2
aftB 4269222 c.-386T>G upstream_gene_variant 0.16
aftB 4269225 c.-389C>T upstream_gene_variant 0.16
ubiA 4269243 p.His197Gln missense_variant 0.15
ubiA 4269688 p.Val49Ala missense_variant 0.15
aftB 4269690 c.-854C>T upstream_gene_variant 0.15
aftB 4269705 c.-869T>C upstream_gene_variant 0.15
ubiA 4269710 p.Gly42Arg missense_variant 0.15
ubiA 4269715 p.Leu40Ala missense_variant 0.15
aftB 4269723 c.-887G>C upstream_gene_variant 0.17
aftB 4269744 c.-908G>C upstream_gene_variant 0.19
ethA 4326322 c.1152T>C synonymous_variant 0.17
ethA 4326331 c.1143C>G synonymous_variant 0.18
ethA 4326346 c.1128C>G synonymous_variant 0.2
ethA 4326352 c.1122T>G synonymous_variant 0.2
ethA 4326535 c.939G>C synonymous_variant 0.18
ethR 4326556 c.-993A>G upstream_gene_variant 0.24
ethA 4326563 p.Ala304Gly missense_variant 0.22
ethR 4326565 c.-984C>A upstream_gene_variant 0.24
ethR 4326591 c.-958A>G upstream_gene_variant 0.21
ethR 4326598 c.-951T>C upstream_gene_variant 0.22
ethR 4326610 c.-939G>C upstream_gene_variant 0.17
ethR 4326613 c.-936G>A upstream_gene_variant 0.15
ethR 4326880 c.-669G>A upstream_gene_variant 0.14
ethR 4326895 c.-654C>T upstream_gene_variant 0.15
ethR 4326901 c.-648C>A upstream_gene_variant 0.15
ethA 4326949 p.Ala175Gly missense_variant 0.16
ethA 4326952 p.Asp174Glu missense_variant 0.17
ethA 4327680 c.-207A>G upstream_gene_variant 0.16
ethA 4327695 c.-222A>G upstream_gene_variant 0.21
ethA 4327707 c.-234G>C upstream_gene_variant 0.25
ethA 4327710 c.-237G>T upstream_gene_variant 0.23
ethA 4327713 c.-240A>T upstream_gene_variant 0.23
ethA 4327716 c.-243G>T upstream_gene_variant 0.21
ethA 4327720 c.-247T>G upstream_gene_variant 0.22
ethA 4327765 c.-292G>A upstream_gene_variant 0.26
ethA 4327770 c.-297G>C upstream_gene_variant 0.25
whiB6 4338593 c.-73delT upstream_gene_variant 1.0
whiB6 4338596 c.-75G>C upstream_gene_variant 1.0
gid 4407588 c.615A>G synonymous_variant 1.0
gid 4407927 p.Glu92Asp missense_variant 1.0