Rv0006 - c.-971A>G
Drug resistance types
42 Sensitive
5 RR-TB
55 HR-TB
6 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
39 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 48 |
| 50 | |
| lineage4 | 14 |
| lineage2.2 | 4 |
| lineage5.2 | 2 |
| lineage2.2.1 | 8 |
| La2 | 1 |
| lineage4.8.1 | 1 |
| lineage3 | 3 |
| lineage3.1.2 | 1 |
| lineage4.1.2.1 | 2 |
| lineage4.3.4 | 2 |
| lineage4.8 | 1 |
| lineage2.2.1.1 | 4 |
| lineage4.9;lineage2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2 | 1 |
| lineage4;lineage2.2 | 1 |
| lineage4.9;lineage4.6.3 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.3.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 149 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2693227 | Other | lineage4.9 | None | SRR6045555 | HR-TB | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR6046133 | HR-TB | None | SRR6044835 | Sensitive | lineage4 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6045233 | HR-TB | None | SRR6046362 | HR-TB | None | ERR4831546 | HR-TB | lineage2.2 | None | SRR6046460 | HR-TB | None | SRR6046611 | HR-TB | lineage4.9 | None | ERR4872094 | MDR-TB | lineage5.2 | None | SRR6046397 | Other | None | SRR6046482 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046824 | HR-TB | None | ERR323037 | HR-TB | lineage4 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR502524 | HR-TB | La2 | None | ERR502889 | Other | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR1063859 | HR-TB | None | ERR323039 | HR-TB | None | ERR323053 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR067681 | HR-TB | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | ERR3283014 | HR-TB | None | ERR133986 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3283028 | Other | None | ERR3283057 | HR-TB | lineage4 | None | ERR3283058 | Other | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR3445503 | HR-TB | None | ERR363453 | Sensitive | lineage4 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR3439432 | Other | None | ERR369151 | Sensitive | lineage4.9 | None | ERR3797036 | HR-TB | None | ERR3797043 | HR-TB | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797048 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797063 | HR-TB | None | ERR3797087 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR4798406 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4798504 | Other | lineage3 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR6359045 | HR-TB | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736865 | HR-TB | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR987722 | HR-TB | None | SRR1172146 | Sensitive | lineage4.9 | None | SRR1172214 | HR-TB | lineage4.9 | None | SRR1172717 | Other | lineage4.9 | None | SRR1172310 | HR-TB | None | SRR1175513 | Other | lineage4.9 | None | SRR1173719 | HR-TB | lineage3 | None | SRR1174897 | HR-TB | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180270 | Other | lineage2.2.1 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181368 | Other | lineage4.9 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR8692790 | RR-TB | lineage4 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR8692887 | Other | None | SRR8692905 | HR-TB | None | SRR8692863 | Other | lineage4;lineage2.2 | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | ERR158583 | HR-TB | None | SRR3675502 | Other | None | ERR176779 | HR-TB | None | ERR4815471 | Other | lineage4.9 | None | SAMN02585910 | Other | lineage2.2.1 | None | ERR161034 | Other | lineage4.3.4.2.1 | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR181744 | HR-TB | None | ERR176740 | HR-TB | None | ERR181887 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | ERR4816964 | Other | lineage4.9 | None | ERR4815079 | RR-TB | lineage3 | None | ERR212123 | Other | None | SRR3675550 | Other | None | ERR212001 | HR-TB | None | ERR1035162 | Other | None | ERR4818710 | Sensitive | lineage4.9 | None | SRR3675571 | HR-TB | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4818536 | Other | lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR1023509 | Other | None | ERR4819462 | Other | lineage4 | None | ERR1035138 | MDR-TB | None | SRR5341418 | Other | None | ERR4819933 | Other | lineage4.9 | None | SRR5341470 | HR-TB | None |
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