Rv0682 - c.159C>G
Drug resistance types
30 Sensitive
2 RR-TB
107 HR-TB
6 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
55 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 13 |
| 88 | |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| lineage4.3.4 | 2 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage4.9 | 26 |
| lineage4 | 26 |
| lineage1.2.1.1 | 1 |
| lineage2.1 | 1 |
| lineage3 | 4 |
| lineage4.1.1.2 | 1 |
| lineage4.1 | 1 |
| lineage4.8 | 2 |
| lineage4.2.1 | 2 |
| lineage4.3.4.2.1 | 3 |
| lineage4.2.1.1 | 1 |
| La2 | 1 |
| lineage4.3.4.1 | 2 |
| lineage4.1.2 | 1 |
| La1 | 2 |
| La1.8.1 | 2 |
| lineage4.6.2.2 | 2 |
| lineage4;lineage3.1 | 1 |
| lineage4.9;La1.3 | 1 |
| La1.2 | 2 |
| lineage1.1.2 | 1 |
| lineage3.1.2 | 1 |
| lineage2.2 | 1 |
| lineage4.9.1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage6.1.3 | 1 |
| lineage4.1.2.1 | 1 |
| lineage4.6.1.1 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage2.2.1.1 | 4 |
| lineage1.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 201 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR26937107 | MDR-TB | lineage2.2.1 | None | ERR176778 | HR-TB | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | ERR181744 | HR-TB | None | SAMN02585910 | Other | lineage2.2.1 | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR176779 | HR-TB | None | ERR158583 | HR-TB | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675234 | Other | None | ERR181824 | HR-TB | lineage4 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR176740 | HR-TB | None | SRR3675284 | HR-TB | lineage4.9 | None | ERR176651 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | ERR181887 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | SRR3675502 | Other | None | SRR3675550 | Other | None | ERR212123 | Other | None | SRR3675456 | HR-TB | None | ERR176751 | HR-TB | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR212034 | HR-TB | None | SRR3675555 | HR-TB | None | ERR212121 | HR-TB | None | ERR212138 | HR-TB | lineage4 | None | SRR3675571 | HR-TB | None | SRR5341408 | Sensitive | lineage3 | None | ERR1035162 | Other | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR4818536 | Other | lineage4.9 | None | SRR5341400 | HR-TB | lineage4 | None | ERR4816466 | HR-TB | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4816656 | HR-TB | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR2446566 | Other | lineage4.1 | None | ERR4818929 | HR-TB | None | ERR4818607 | Sensitive | lineage4.9 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341315 | Sensitive | None | ERR4819462 | Other | lineage4 | None | SRR5341418 | Other | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341313 | HR-TB | None | SRR5341456 | Other | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR1035138 | MDR-TB | None | ERR2693254 | Other | None | ERR2693231 | Other | None | ERR2693230 | Other | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR5341470 | HR-TB | None | SRR6045555 | HR-TB | None | ERR2693257 | Other | None | ERR2693227 | Other | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6045892 | Sensitive | None | SRR6046133 | HR-TB | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6044890 | Other | lineage4.9 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045233 | HR-TB | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046299 | HR-TB | None | ERR11465333 | Sensitive | lineage4.3.4.2.1 | None | SRR6046492 | Other | None | SRR6046644 | HR-TB | None | ERR4831117 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046397 | Other | None | SRR6046460 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046824 | HR-TB | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR502524 | HR-TB | La2 | None | ERR294266 | HR-TB | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | SRR8217918 | HR-TB | None | ERR502889 | Other | None | ERR323107 | Other | lineage4 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR323039 | HR-TB | None | ERR323045 | HR-TB | None | ERR323053 | HR-TB | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR067681 | HR-TB | None | ERR067699 | HR-TB | lineage4 | None | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR108471 | HR-TB | lineage4 | None | ERR3283025 | HR-TB | None | ERR11465511 | Sensitive | lineage4.3.4.2.1 | None | ERR133986 | HR-TB | None | ERR3283010 | Other | La1 | None | ERR133825 | Sensitive | lineage4 | None | ERR3283008 | Other | lineage4.9 | None | ERR3283058 | Other | lineage4.9 | None | ERR3283024 | Other | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283032 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3439432 | Other | None | ERR3445504 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3797017 | Other | None | ERR3797015 | HR-TB | None | ERR3797014 | Other | None | ERR3797024 | Other | lineage4.9 | None | ERR3797043 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797046 | HR-TB | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797061 | Other | None | ERR3797044 | Other | None | ERR3797060 | Other | La1.8.1 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR4188247 | HR-TB | None | ERR3797081 | Sensitive | lineage4 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR387051 | HR-TB | None | ERR405209 | Sensitive | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR3797086 | Other | lineage4.9 | None | ERR403298 | HR-TB | lineage4 | None | ERR473332 | Other | lineage4 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4769446 | Sensitive | lineage4.9;La1.3 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4798262 | HR-TB | La1 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4798406 | HR-TB | None | ERR4798504 | Other | lineage3 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR4811493 | HR-TB | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6198317 | Other | La1.2 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359045 | HR-TB | None | ERR6359070 | Other | lineage4.9 | None | ERR6358991 | HR-TB | None | ERR6359069 | Other | lineage4.9 | None | ERR6866410 | Sensitive | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR245758 | Other | lineage4.9.1 | None | ERR736848 | HR-TB | None | ERR736835 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR736856 | HR-TB | lineage4 | None | ERR736865 | HR-TB | None | ERR9786076 | Sensitive | lineage3 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9119669 | HR-TB | None | ERR9634265 | Sensitive | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR987722 | HR-TB | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR10809074 | Sensitive | lineage4 | None | SRR10808805 | Sensitive | None | SRR1174897 | HR-TB | None | SRR1172214 | HR-TB | lineage4.9 | None | SRR1172310 | HR-TB | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1180270 | Other | lineage2.2.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1181251 | Other | lineage2.2.1 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR17658565 | Other | lineage3 | None |
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