Rv0486 - c.345G>A
Drug resistance types
25 Sensitive
4 RR-TB
14 HR-TB
8 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
19 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 34 |
| M.canetti;lineage4.6.4;lineage4.9 | 2 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 3 |
| 1 | |
| lineage2.2.1.1 | 4 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage4.1.2 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| lineage4 | 1 |
| lineage4.3.4.2.1 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.8 | 1 |
| lineage2.2.1 | 4 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage3 | 1 |
| lineage2.2 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.3.2.1 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| M.canetti;lineage4.2 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage4.6.4;lineage4.9 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 72 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| ERR4796254 | Sensitive | lineage4.9 | None |
| ERR3439432 | Other | M.canetti;lineage4.6.4;lineage4.9 | None |
| SRR3675586 | Other | M.canetti;lineage4.6.4;lineage4.9 | None |
| ERR323062 | Sensitive | lineage4.9 | None |
| SRR1158918 | Sensitive | lineage4.9 | None |
| ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
| ERR1063896 | Sensitive | None | |
| SRR6280224 | Sensitive | lineage2.2.1.1 | cn |
| ERR502511 | Sensitive | lineage4.9 | None |
| SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None |
| SRR1159378 | Other | lineage4.9 | None |
| ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None |
| ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None |
| SRR9970980 | HR-TB | lineage4.1.2 | None |
| ERR6358979 | Other | lineage4.9 | None |
| ERR702405 | Sensitive | lineage4.9 | None |
| ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None |
| ERR4798099 | Other | lineage4.9 | None |
| SRR3675446 | RR-TB | lineage4.9 | None |
| ERR1063883 | HR-TB | lineage4.9 | None |
| SRR6280299 | Sensitive | lineage2.2.1.1 | cn |
| ERR124636 | Sensitive | lineage4.9 | None |
| SRR5341461 | HR-TB | lineage4.9 | None |
| SRR6511621 | Sensitive | lineage4.9 | None |
| ERR3273109 | HR-TB | lineage4 | None |
| ERR245794 | HR-TB | lineage4.3.4.2.1 | None |
| SRR5341453 | Other | lineage4.9 | None |
| ERR1035122 | Sensitive | lineage4.9 | None |
| SRR12416842 | HR-TB | lineage4.9 | None |
| ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None |
| SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
| ERR323056 | HR-TB | lineage4.4.1.2 | None |
| SRR9970979 | Sensitive | lineage4.8 | None |
| ERR323085 | Sensitive | lineage4.9 | None |
| ERR736834 | Sensitive | lineage4.9 | None |
| SRR5341299 | HR-TB | lineage4.9 | None |
| SRR1180270 | Other | lineage2.2.1 | None |
| SRR5341469 | HR-TB | lineage4.9 | None |
| SRR3675390 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
| SRR6832787 | Sensitive | lineage2.2.1 | None |
| ERR137286 | Other | lineage4.9 | None |
| ERR323066 | Sensitive | lineage4.9 | None |
| ERR736872 | HR-TB | lineage4.9 | None |
| ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None |
| SRR28351347 | Other | lineage3 | None |
| ERR4810624 | MDR-TB | lineage2.2 | None |
| SRR6280275 | Sensitive | lineage2.2.1.1 | cn |
| SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None |
| ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None |
| SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR5341300 | HR-TB | lineage4.9 | None |
| ERR323115 | Sensitive | lineage4.9 | None |
| SRR5341384 | HR-TB | lineage4.9 | None |
| ERR502510 | Sensitive | lineage4.9 | None |
| SRR3675235 | Sensitive | lineage4.9 | None |
| SRR9970981 | RR-TB | lineage4.3.2.1 | None |
| ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None |
| ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None |
| ERR751326 | Other | lineage4.9 | None |
| SRR21031761 | Sensitive | lineage2.2.1.1 | None |
| ERR1023509 | Other | lineage4.9 | None |
| SRR5341308 | Sensitive | lineage4.9 | None |
| SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR5341467 | Other | lineage4.9 | None |
| SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None |
| ERR403298 | MDR-TB | M.canetti;lineage4.2 | None |
| SRR3675585 | Sensitive | lineage4.9 | None |
| ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None |
| ERR4188322 | Other | lineage4.6.4;lineage4.9 | None |
| ERR4797474 | Sensitive | lineage4.9 | None |
| ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None |
| ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None |
