Rv3596c - c.657C>T
Drug resistance types
102 Sensitive
5 RR-TB
19 HR-TB
15 MDR-TB
2 Pre-XDR-TB
2 XDR-TB
68 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 8 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| M.canetti | 67 |
| lineage3 | 5 |
| La3;M.canetti | 11 |
| lineage4.9 | 51 |
| La3;lineage4.9 | 6 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 2 |
| lineage6.1.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| La1;lineage4.9 | 1 |
| lineage4.1;lineage4.8 | 1 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| M.canetti;lineage4.6.4;lineage4.9 | 2 |
| lineage1;lineage4.9 | 1 |
| La2;M.canetti | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage4.3.4 | 1 |
| lineage4.3.4.2.1 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.3.3 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| lineage4.8 | 1 |
| lineage4.6.2.2 | 2 |
| lineage4.1.2.1 | 2 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1.4 | 1 |
| M.canetti;lineage4.2 | 1 |
| lineage3;lineage4.9 | 1 |
| lineage2.2.1.1 | 1 |
| 2 | |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La1.6;lineage4 | 1 |
| M.canetti;lineage2.2 | 2 |
| lineage4.5 | 2 |
| La3;lineage2.1;lineage4.9 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| lineage4.1.1.3 | 3 |
| La1.7.X-unk4;lineage4.9 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.1.2 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| lineage1.1.1;lineage4 | 1 |
| lineage4.6.4;lineage4.9 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| lineage4.2.1 | 1 |
| lineage1.1.3.2 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 213 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR20970043 | MDR-TB | lineage2.2.1 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | SRR18289195 | Sensitive | M.canetti | None | ERR266120 | Sensitive | M.canetti | None | ERR3597007 | Sensitive | M.canetti | None | ERR990545 | Other | lineage3 | None | ERR1336820 | Sensitive | La3;M.canetti | None | ERR9125475 | Other | M.canetti | None | ERR4816019 | Sensitive | M.canetti | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR176643 | Other | La3;lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR552305 | Sensitive | M.canetti | None | ERR176751 | Other | lineage4.9 | None | SRR5818676 | Other | M.canetti | dj | ERR9787153 | Other | lineage6.1.3 | None | SRR6832249 | Sensitive | lineage2.2.1 | None | SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | ERR1336826 | Sensitive | La3;M.canetti | None | ERR4829238 | Sensitive | lineage3 | None | SRR10177262 | Sensitive | M.canetti | None | ERR11252612 | Other | La3;lineage4.9 | None | ERR1043163 | Other | La3;M.canetti | None | ERR212033 | Other | lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR4817181 | Sensitive | M.canetti | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR3675502 | Sensitive | lineage4.9 | None | ERR3597003 | Sensitive | M.canetti | None | ERR9786076 | Sensitive | lineage3 | None | SRR22179528 | Sensitive | M.canetti | None | SRR28119827 | Other | La3;lineage4.9 | None | ERR9786525 | Other | lineage4.1;lineage4.8 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR24061597 | Sensitive | M.canetti | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR266122 | Sensitive | La3;M.canetti | None | SRR3675586 | Other | M.canetti;lineage4.6.4;lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR266126 | Sensitive | La2;M.canetti | None | ERR4821046 | Sensitive | M.canetti | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR161034 | HR-TB | lineage4.3.4.2.1 | None | ERR552304 | Sensitive | M.canetti | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR3675580 | Sensitive | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | ERR551055 | Sensitive | M.canetti | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4815361 | Other | M.canetti | None | SRR1165628 | Other | La3;lineage4.9 | None | ERR551056 | Sensitive | M.canetti | None | ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None | ERR266108 | Sensitive | M.canetti | None | SRR3675446 | RR-TB | lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | ERR552307 | Sensitive | M.canetti | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR26399490 | Sensitive | lineage4.9 | None | ERR3597006 | Other | La3;M.canetti | None | SRR1175508 | Sensitive | lineage4.9 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR400326 | Other | lineage4.9 | None | ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR400336 | Sensitive | lineage4.9 | None | SRR5818653 | Sensitive | M.canetti | dj | ERR551181 | Sensitive | M.canetti | None | ERR7451300 | Sensitive | M.canetti | None | ERR323037 | Other | lineage4.9 | None | ERR266109 | Sensitive | M.canetti | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR6358951 | Sensitive | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | SRR10177263 | Sensitive | M.canetti | None | SRR10177258 | Other | M.canetti | None | SRR24061598 | Sensitive | M.canetti | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR16278274 | Other | La1.4 | None | ERR1043164 | Other | La3;M.canetti | None | SRR28170812 | Sensitive | M.canetti | None | SRR5818605 | Other | M.canetti | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | SRR5341396 | Other | lineage3;lineage4.9 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | ERR212001 | HR-TB | None | SRR10808730 | Other | lineage4.9 | None | ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR313114 | Sensitive | M.canetti | None | ERR736875 | HR-TB | lineage4.9 | None | SRR5818668 | Sensitive | M.canetti | dj | SRR5818685 | Sensitive | M.canetti | None | SRR1167384 | Other | La3;lineage4.9 | None | ERR266121 | Sensitive | M.canetti | None | SRR3675477 | Sensitive | lineage4.9 | None | SRR28351554 | Sensitive | La1.6;lineage4 | None | SRR6046385 | Sensitive | lineage4.9 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | SRR24061599 | Sensitive | M.canetti | None | SRR24061600 | Sensitive | M.canetti | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | ERR551179 | Sensitive | M.canetti | None | ERR266125 | Other | La3;M.canetti | None | SRR6046611 | Sensitive | lineage4.9 | None | ERR3597001 | Sensitive | M.canetti | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR11252736 | Other | lineage4.9 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR5818567 | Other | M.canetti | dj | ERR3597004 | Sensitive | M.canetti | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5818614 | Sensitive | M.canetti | dj | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR9896144 | Other | lineage3 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | ERR1336824 | Sensitive | La3;M.canetti | None | SRR10522783 | Sensitive | M.canetti | None | SRR16156775 | Other | lineage4.9 | None | ERR1336825 | Sensitive | La3;M.canetti | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR4816548 | HR-TB | lineage4.5 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR551057 | Other | M.canetti | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR266106 | Sensitive | M.canetti | None | SRR5341323 | Sensitive | lineage4.9 | None | SRR18289196 | Sensitive | M.canetti | None | SRR5818652 | Sensitive | M.canetti | dj | SRR16058674 | Other | M.canetti | None | SRR6046564 | Sensitive | lineage4.9 | None | SRR3675387 | Other | lineage4.9 | None | ERR8975532 | HR-TB | lineage4.3.2.1 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR5818661 | Other | M.canetti | dj | ERR7451301 | Sensitive | M.canetti | None | ERR1336821 | Sensitive | La3;M.canetti | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR551182 | Sensitive | M.canetti | None | SRR10177260 | Other | M.canetti | None | ERR266124 | Other | M.canetti | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | ERR551180 | Sensitive | M.canetti | None | ERR736831 | Other | lineage4.9 | None | ERR9786843 | Other | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | SRR6832787 | Sensitive | lineage2.2.1 | None | ERR1336823 | Sensitive | La3;M.canetti | None | ERR4188322 | Other | lineage4.6.4;lineage4.9 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | ERR867570 | RR-TB | lineage4.9 | None | ERR3439432 | Other | M.canetti;lineage4.6.4;lineage4.9 | None | ERR3597005 | Sensitive | M.canetti | None | ERR2512770 | Sensitive | lineage4.2.1 | None | ERR313116 | Sensitive | M.canetti | None | ERR4819927 | Sensitive | M.canetti | None | ERR4811030 | Sensitive | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR1336822 | Sensitive | M.canetti | None | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR1175496 | Sensitive | lineage4.9 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR7821126 | Sensitive | lineage1.1.3.2 | None | SRR1238559 | Other | lineage4.9 | None | SRR10522763 | Sensitive | M.canetti | None | SRR3675522 | Other | lineage4.9 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | SRR16058668 | Sensitive | M.canetti | None | ERR266107 | Other | M.canetti | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR6650709 | Sensitive | M.canetti | None | SRR10177261 | Sensitive | M.canetti | None | SRR3675455 | Sensitive | lineage4.9 | None | ERR266110 | Other | M.canetti | None | ERR4799547 | HR-TB | lineage2.2.1 | None | ERR369161 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR10177259 | Other | M.canetti | None | ERR313113 | Other | M.canetti | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR3597002 | Other | M.canetti | None | ERR1063855 | Other | lineage4.9 | None | SRR1169306 | Other | La3;lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | ERR313115 | Other | M.canetti | None | SRR11662694 | Other | lineage4.9 | None | SAMEA2533358 | MDR-TB | lineage4.1.1.3 | None | ERR9125480 | Sensitive | M.canetti | None | ERR4814396 | Sensitive | lineage4.1.1.3 | None | ERR313117 | Other | M.canetti | None | SRR6046245 | Other | lineage4.9 | None | ERR2514552 | Sensitive | lineage3 | None |
|---|
