Rv3596c - c.657C>T
Drug resistance types
66 Sensitive
4 RR-TB
33 HR-TB
11 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
41 Other
lineage Counts
| lineage | Count |
|---|---|
| 59 | |
| lineage4.9 | 35 |
| lineage4.1.2 | 2 |
| lineage3 | 5 |
| lineage4 | 20 |
| lineage2.2.1 | 11 |
| lineage2.2 | 3 |
| lineage4.6.2.2 | 2 |
| La1.8.1 | 1 |
| La1.2 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.5 | 2 |
| lineage4.1.2.1 | 3 |
| lineage4.3.4 | 1 |
| lineage4.8;lineage4.1 | 1 |
| lineage1.1.3.2 | 1 |
| lineage4.3.2.1 | 1 |
| lineage6.1.3 | 1 |
| lineage4.7 | 1 |
| lineage4.8 | 1 |
| La3 | 1 |
| lineage2.2.1.1 | 1 |
| La1.4 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.3 | 1 |
| lineage1 | 1 |
| lineage4.3.3 | 1 |
| lineage4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 161 |
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4821046 | Sensitive | None | SRR5818685 | Sensitive | None | SRR5818605 | Sensitive | None | SRR6046460 | HR-TB | None | SRR6046245 | Other | lineage4.9 | None | SRR6046385 | Other | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6045384 | Other | lineage4.1.2 | None | SRR6046362 | HR-TB | None | ERR4829238 | Sensitive | lineage3 | None | SRR6046824 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046482 | HR-TB | None | SRR6046611 | HR-TB | lineage4.9 | None | ERR4831719 | MDR-TB | lineage2.2.1 | None | ERR323037 | HR-TB | lineage4 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4831638 | Sensitive | None | SRR6832249 | Other | lineage2.2.1 | None | SRR9970980 | Other | lineage4.1.2 | None | ERR502942 | Sensitive | lineage4.9 | None | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR502889 | Other | None | ERR502943 | HR-TB | None | ERR3597005 | Sensitive | None | ERR133986 | HR-TB | None | ERR3439432 | Other | None | SRR9971114 | Other | lineage2.2.1 | None | ERR067681 | HR-TB | None | ERR1063855 | Other | lineage4 | None | ERR10796569 | Other | lineage4.9 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3597003 | Sensitive | None | ERR3597002 | Sensitive | None | ERR3597001 | Sensitive | None | ERR3597006 | Sensitive | None | ERR3597007 | Sensitive | None | ERR400320 | Sensitive | lineage4 | None | ERR403298 | HR-TB | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4797313 | HR-TB | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4798406 | HR-TB | None | ERR4812155 | Sensitive | None | ERR4798898 | MDR-TB | lineage3.1.2.1 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811030 | Sensitive | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR6358951 | HR-TB | lineage4 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736837 | Other | lineage4.9 | None | ERR7451300 | Sensitive | None | ERR736856 | HR-TB | lineage4 | None | ERR736835 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR7451301 | Sensitive | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9786076 | Sensitive | lineage3 | None | ERR7821126 | Sensitive | lineage1.1.3.2 | None | ERR8975532 | HR-TB | lineage4.3.2.1 | None | ERR9125480 | Sensitive | None | ERR9787153 | Other | lineage6.1.3 | None | ERR9786843 | Other | None | ERR9896144 | Other | lineage3 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR990545 | Other | lineage3 | None | SRR1166181 | MDR-TB | lineage4 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1169249 | Other | La3 | None | SRR1167384 | Other | lineage4 | None | SRR1169306 | Other | None | SRR1173687 | Pre-XDR-TB | lineage2.2.1 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175508 | Other | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1180270 | Other | lineage2.2.1 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR16156775 | Other | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR16058668 | Sensitive | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR22179528 | Sensitive | None | SRR24061597 | Sensitive | None | SRR24061599 | Sensitive | None | SRR24061598 | Sensitive | None | SRR26399490 | Sensitive | lineage4.9 | None | SRR24061600 | Sensitive | None | ERR176751 | HR-TB | None | SRR3675455 | Sensitive | lineage4 | None | ERR4814396 | Sensitive | lineage4.1.1.3 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR3675477 | Other | lineage4.9 | None | ERR158583 | HR-TB | None | ERR4815361 | Sensitive | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675249 | Sensitive | lineage4.9 | None | SRR3675229 | Other | lineage4 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675283 | Sensitive | lineage4.9 | None | SRR3675266 | Sensitive | lineage4.9 | None | ERR176568 | Other | lineage4.3 | None | SRR3675279 | Other | None | SRR3675387 | Sensitive | None | ERR176643 | HR-TB | None | SRR3675318 | Other | lineage4.9 | None | ERR4816019 | Sensitive | None | SRR3675502 | Other | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675522 | Other | None | ERR212001 | HR-TB | None | SRR3675542 | Other | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675547 | Other | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675553 | Sensitive | lineage4.9 | None | ERR4817181 | Sensitive | None | SRR3675550 | Other | None | ERR212033 | HR-TB | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR4816466 | HR-TB | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR245790 | Sensitive | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SRR5818653 | Sensitive | dj | SRR5818661 | Sensitive | dj | SRR5818676 | Sensitive | dj | SRR5818652 | Sensitive | dj | ERR4818126 | RR-TB | lineage1 | None | SRR5818668 | Sensitive | dj | SRR5818614 | Sensitive | dj | SRR5818567 | Sensitive | dj | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR5007204 | Other | lineage4.1.2.1 | None | ERR2512770 | Other | lineage4.2.1 | None | SRR5341396 | Other | lineage4 | None | SRR5341418 | Other | None | ERR4819927 | Sensitive | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR2514552 | Sensitive | lineage3 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR5341323 | Sensitive | lineage4 | None |
|---|
