TB-Profiler result

Run: ERR4811031
Summary

Run ID: ERR4811031

Sample name:

Date: 2024-10-04T23:09:49.259112

Number of reads: 1053051

Percentage reads mapped: 19.76

Median coverage: 23.0

Strain: lineage4.5

Spoligotype:

Drug-resistance: Sensitive

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Lineage Table: The lineage is inferred by analysing lineage specific SNPs
Lineage Family RDs Frequency
lineage4.5 Euro-American RD122 0.89
lineage4 Euro-American None 1.0
Drug resistance: This table reports drug-resistance associated mutations found in known resistance genes
Drug Resistance Supporting mutations WHO confidence Comment
rifampicin
isoniazid
ethambutol
pyrazinamide
streptomycin
fluoroquinolones
moxifloxacin
ofloxacin
levofloxacin
ciprofloxacin
aminoglycosides
amikacin
capreomycin
kanamycin
cycloserine
ethionamide
clofazimine
para-aminosalicylic_acid
delamanid
bedaquiline
linezolid
Drug resistance-Associated Mutations: This table reports mutations found in candidate resistance genes which have been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs Confidence Comment
Non-Associated Mutations: This table reports mutations found in candidate resistance genes which have not been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs Confidence
dnaA 609 c.609C>G synonymous_variant 0.3 isoniazid
dnaA 627 c.627G>A synonymous_variant 0.51 isoniazid
dnaA 633 c.633T>G synonymous_variant 0.56 isoniazid
dnaA 660 c.660G>C synonymous_variant 0.64 isoniazid Not assoc w R - Interim
dnaA 663 c.663A>C synonymous_variant 0.64 isoniazid
dnaA 666 c.666C>G synonymous_variant 0.65 isoniazid
dnaA 675 c.675C>G synonymous_variant 0.65 isoniazid Not assoc w R - Interim
dnaA 678 c.678A>G synonymous_variant 0.65 isoniazid Not assoc w R - Interim
dnaA 681 c.681G>T synonymous_variant 0.65 isoniazid
dnaA 682 c.682_684delTTGinsCTC synonymous_variant 0.65 isoniazid
dnaA 687 c.687C>T synonymous_variant 0.62 isoniazid
dnaA 693 c.693A>C synonymous_variant 0.64 isoniazid
dnaA 705 c.705A>G synonymous_variant 0.68 isoniazid
dnaA 708 c.708T>C synonymous_variant 0.7 isoniazid
dnaA 714 c.714C>T synonymous_variant 0.71 isoniazid
dnaA 720 c.720G>A synonymous_variant 0.75 isoniazid
dnaA 741 c.741T>C synonymous_variant 0.77 isoniazid Not assoc w R - Interim
dnaA 747 c.747G>T synonymous_variant 0.77 isoniazid
dnaA 748 c.748_750delCTCinsTTG synonymous_variant 0.76 isoniazid
dnaA 763 p.Lys255Arg missense_variant 0.79 isoniazid
dnaA 771 c.771A>G synonymous_variant 0.8 isoniazid
dnaA 793 p.Val265Ile missense_variant 0.75 isoniazid Uncertain significance
dnaA 801 c.801G>T synonymous_variant 0.74 isoniazid
dnaA 804 c.804G>C synonymous_variant 0.73 isoniazid
dnaA 805 c.805_807delTTGinsCTC synonymous_variant 0.73 isoniazid
dnaA 822 c.822A>G synonymous_variant 0.72 isoniazid
dnaA 828 c.828T>C synonymous_variant 0.72 isoniazid Not assoc w R - Interim
dnaA 837 c.837A>G synonymous_variant 0.72 isoniazid
dnaA 840 c.840G>A synonymous_variant 0.73 isoniazid
dnaA 846 c.846T>C synonymous_variant 0.73 isoniazid
dnaA 849 c.849A>G synonymous_variant 0.73 isoniazid
dnaA 852 c.852G>A synonymous_variant 0.74 isoniazid Not assoc w R - Interim
dnaA 885 c.885T>C synonymous_variant 0.67 isoniazid
dnaA 888 c.888C>G synonymous_variant 0.66 isoniazid
dnaA 897 c.897A>G synonymous_variant 0.68 isoniazid
dnaA 903 c.903C>G synonymous_variant 0.66 isoniazid Not assoc w R - Interim
dnaA 909 c.909A>C synonymous_variant 0.61 isoniazid Not assoc w R - Interim
dnaA 912 c.912T>C synonymous_variant 0.6 isoniazid
dnaA 918 c.918C>G synonymous_variant 0.61 isoniazid
dnaA 924 c.924C>G synonymous_variant 0.57 isoniazid
dnaA 928 p.Gln310Gly missense_variant 0.56 isoniazid
dnaA 933 c.933C>G synonymous_variant 0.56 isoniazid
dnaA 952 c.952C>T synonymous_variant 0.53 isoniazid
dnaA 955 c.955_957delAGAinsCGT synonymous_variant 0.54 isoniazid
dnaA 966 c.966T>C synonymous_variant 0.53 isoniazid
dnaA 969 c.969G>A synonymous_variant 0.51 isoniazid
dnaA 975 c.975G>C synonymous_variant 0.5 isoniazid
dnaA 984 c.984T>C synonymous_variant 0.45 isoniazid Not assoc w R - Interim
dnaA 990 c.990A>G synonymous_variant 0.44 isoniazid Not assoc w R - Interim
dnaA 993 c.993A>G synonymous_variant 0.37 isoniazid
dnaA 996 c.996A>C synonymous_variant 0.37 isoniazid Not assoc w R - Interim
dnaA 1008 c.1008G>A synonymous_variant 0.31 isoniazid Not assoc w R - Interim
gyrA 6610 c.-692C>G upstream_gene_variant 0.23 levofloxacin
moxifloxacin
gyrA 6613 c.-689A>G upstream_gene_variant 0.23 levofloxacin
moxifloxacin
gyrA 6616 c.-686A>G upstream_gene_variant 0.23 levofloxacin
moxifloxacin
gyrA 6619 c.-683T>C upstream_gene_variant 0.29 levofloxacin
moxifloxacin
gyrA 6634 c.-668T>C upstream_gene_variant 0.39 levofloxacin
moxifloxacin
gyrA 6637 c.-665T>G upstream_gene_variant 0.4 levofloxacin
moxifloxacin
gyrA 6640 c.-662A>C upstream_gene_variant 0.39 levofloxacin
moxifloxacin
gyrA 6643 c.-659A>G upstream_gene_variant 0.4 levofloxacin
moxifloxacin
gyrA 6646 c.-656C>T upstream_gene_variant 0.44 levofloxacin
moxifloxacin
gyrA 6655 c.-647T>C upstream_gene_variant 0.49 levofloxacin
moxifloxacin
gyrA 6673 c.-629A>C upstream_gene_variant 0.55 levofloxacin
moxifloxacin
gyrA 6676 c.-626T>G upstream_gene_variant 0.55 levofloxacin
moxifloxacin
gyrA 6703 c.-599G>C upstream_gene_variant 0.62 levofloxacin
moxifloxacin
gyrA 6706 c.-596G>A upstream_gene_variant 0.63 levofloxacin
moxifloxacin
gyrA 6709 c.-593A>G upstream_gene_variant 0.63 levofloxacin
moxifloxacin
gyrA 6712 c.-590G>C upstream_gene_variant 0.65 levofloxacin
moxifloxacin
gyrA 6727 c.-575G>T upstream_gene_variant 0.68 levofloxacin
moxifloxacin
gyrA 6728 c.-574_-572delCTAinsTTG upstream_gene_variant 0.67 levofloxacin
moxifloxacin
gyrA 6739 c.-563C>T upstream_gene_variant 0.7 levofloxacin
moxifloxacin
gyrB 6745 c.1506T>C synonymous_variant 0.68 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 6754 c.-548C>T upstream_gene_variant 0.72 levofloxacin
moxifloxacin
gyrB 6763 c.1524G>C synonymous_variant 0.73 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrB 6766 c.1527G>A synonymous_variant 0.7 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrB 6772 c.1533C>G synonymous_variant 0.69 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrB 6775 c.1536G>C synonymous_variant 0.68 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrB 6793 c.1554T>C synonymous_variant 0.71 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrB 6798 p.Gly520Ala missense_variant 0.68 levofloxacin Not assoc w R
moxifloxacin Uncertain significance
gyrB 6808 c.1569C>G synonymous_variant 0.63 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrB 6824 c.1585C>T synonymous_variant 0.62 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrB 6841 c.1602T>C synonymous_variant 0.54 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrB 6862 c.1623C>G synonymous_variant 0.48 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 6865 c.-437G>A upstream_gene_variant 0.46 levofloxacin
moxifloxacin
gyrA 6869 c.-433T>C upstream_gene_variant 0.44 levofloxacin
moxifloxacin
gyrA 6872 c.-430_-428delTTGinsCTT upstream_gene_variant 0.43 levofloxacin
moxifloxacin
gyrB 6878 c.1639T>C synonymous_variant 0.43 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 6889 c.-413G>A upstream_gene_variant 0.41 levofloxacin
moxifloxacin
gyrA 6898 c.-404G>T upstream_gene_variant 0.38 levofloxacin
moxifloxacin
gyrA 6982 c.-320A>G upstream_gene_variant 0.39 levofloxacin
moxifloxacin
gyrA 6985 c.-317C>T upstream_gene_variant 0.38 levofloxacin
moxifloxacin
gyrA 6988 c.-314C>G upstream_gene_variant 0.38 levofloxacin
moxifloxacin
gyrA 7006 c.-296T>G upstream_gene_variant 0.37 levofloxacin
moxifloxacin
gyrB 7010 p.Leu591Met missense_variant 0.37 levofloxacin
moxifloxacin
gyrA 7015 c.-287G>A upstream_gene_variant 0.38 levofloxacin
moxifloxacin
gyrA 7018 c.-284G>C upstream_gene_variant 0.37 levofloxacin
moxifloxacin
gyrA 7024 c.-278G>C upstream_gene_variant 0.39 levofloxacin
moxifloxacin
gyrA 7033 c.-269G>C upstream_gene_variant 0.45 levofloxacin
moxifloxacin
gyrB 7051 p.Glu604Asp missense_variant 0.55 levofloxacin
moxifloxacin
gyrB 7060 c.1821T>C synonymous_variant 0.63 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7066 c.-236G>T upstream_gene_variant 0.65 levofloxacin
moxifloxacin
gyrA 7078 c.-224A>G upstream_gene_variant 0.66 levofloxacin
moxifloxacin
gyrA 7081 c.-221T>C upstream_gene_variant 0.66 levofloxacin
moxifloxacin
gyrA 7084 c.-218A>G upstream_gene_variant 0.68 levofloxacin
moxifloxacin
gyrA 7090 c.-212C>T upstream_gene_variant 0.71 levofloxacin
moxifloxacin
gyrB 7093 c.1854T>C synonymous_variant 0.72 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrB 7100 c.1861T>C synonymous_variant 0.73 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7123 c.-179C>G upstream_gene_variant 0.7 levofloxacin
moxifloxacin
gyrB 7126 c.1887G>C synonymous_variant 0.69 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7129 c.-173T>G upstream_gene_variant 0.67 levofloxacin
moxifloxacin
gyrA 7132 c.-170T>C upstream_gene_variant 0.67 levofloxacin
moxifloxacin
gyrA 7135 c.-167G>A upstream_gene_variant 0.68 levofloxacin
moxifloxacin
gyrA 7136 c.-166T>C upstream_gene_variant 0.68 levofloxacin
moxifloxacin
gyrA 7141 c.-161T>G upstream_gene_variant 0.68 levofloxacin
moxifloxacin
gyrA 7144 c.-158A>G upstream_gene_variant 0.69 levofloxacin
moxifloxacin
gyrA 7150 c.-152G>A upstream_gene_variant 0.67 levofloxacin
moxifloxacin
gyrB 7153 c.1914G>C synonymous_variant 0.67 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7168 c.-134C>G upstream_gene_variant 0.69 levofloxacin
moxifloxacin
gyrA 7178 c.-124T>C upstream_gene_variant 0.65 levofloxacin
moxifloxacin
gyrB 7186 c.1947C>G synonymous_variant 0.63 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7189 c.-113C>T upstream_gene_variant 0.63 levofloxacin
moxifloxacin
gyrB 7198 c.1959C>T synonymous_variant 0.6 levofloxacin Not assoc w R - Interim
moxifloxacin
gyrB 7210 p.Asp657Glu missense_variant 0.44 levofloxacin
moxifloxacin
gyrA 7213 c.-89G>A upstream_gene_variant 0.45 levofloxacin
moxifloxacin
gyrB 7216 c.1977G>C synonymous_variant 0.44 levofloxacin Not assoc w R - Interim
moxifloxacin
gyrA 7225 c.-77T>C upstream_gene_variant 0.4 levofloxacin
moxifloxacin
gyrA 7234 c.-68C>A upstream_gene_variant 0.33 levofloxacin
moxifloxacin
gyrA 7362 p.Glu21Gln missense_variant 1.0 levofloxacin Not assoc w R
moxifloxacin Not assoc w R
gyrA 7391 c.90C>T synonymous_variant 0.34 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7403 c.102C>T synonymous_variant 0.32 levofloxacin
moxifloxacin
gyrA 7412 c.111C>G synonymous_variant 0.32 levofloxacin
moxifloxacin
gyrA 7421 c.120G>C synonymous_variant 0.31 levofloxacin
moxifloxacin
gyrA 7424 c.123G>C synonymous_variant 0.3 levofloxacin
moxifloxacin
gyrA 7427 c.126G>C synonymous_variant 0.3 levofloxacin
moxifloxacin
gyrA 7433 c.132G>C synonymous_variant 0.31 levofloxacin
moxifloxacin
gyrA 7439 c.138C>T synonymous_variant 0.33 levofloxacin
moxifloxacin
gyrA 7442 c.141G>C synonymous_variant 0.34 levofloxacin
moxifloxacin
gyrA 7451 c.150C>A synonymous_variant 0.35 levofloxacin
moxifloxacin
gyrA 7457 c.156T>C synonymous_variant 0.34 levofloxacin
moxifloxacin
gyrA 7463 c.162G>C synonymous_variant 0.33 levofloxacin
moxifloxacin
gyrA 7466 c.165G>C synonymous_variant 0.33 levofloxacin
moxifloxacin
gyrA 7469 c.168C>G synonymous_variant 0.33 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7472 c.171T>C synonymous_variant 0.33 levofloxacin Not assoc w R - Interim
moxifloxacin
gyrA 7475 c.174A>G synonymous_variant 0.33 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7480 p.Phe60Tyr missense_variant 0.33 levofloxacin
moxifloxacin
gyrA 7484 c.183T>C synonymous_variant 0.36 levofloxacin
moxifloxacin
gyrA 7499 c.198G>C synonymous_variant 0.53 levofloxacin
moxifloxacin
gyrA 7511 c.210C>T synonymous_variant 0.56 levofloxacin
moxifloxacin
gyrA 7523 c.222C>G synonymous_variant 0.52 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7526 c.225G>A synonymous_variant 0.52 levofloxacin
moxifloxacin
gyrA 7547 c.246C>T synonymous_variant 0.55 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7553 c.252C>T synonymous_variant 0.56 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7559 c.258G>C synonymous_variant 0.56 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7565 c.264C>T synonymous_variant 0.55 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7574 c.273G>C synonymous_variant 0.56 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7585 p.Ser95Thr missense_variant 1.0 levofloxacin Not assoc w R
moxifloxacin Not assoc w R
gyrA 7589 c.288G>C synonymous_variant 0.56 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7595 c.294C>T synonymous_variant 0.56 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7607 c.306C>T synonymous_variant 0.57 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7637 c.336C>A synonymous_variant 0.61 levofloxacin
moxifloxacin
gyrA 7655 c.354G>A synonymous_variant 0.42 levofloxacin
moxifloxacin
gyrA 7658 c.357A>G synonymous_variant 0.38 levofloxacin
moxifloxacin
gyrA 7661 c.360C>T synonymous_variant 0.35 levofloxacin
moxifloxacin
gyrA 7664 c.363T>C synonymous_variant 0.36 levofloxacin
moxifloxacin
gyrA 7670 c.369A>G synonymous_variant 0.38 levofloxacin
moxifloxacin
gyrA 7671 p.Pro124Ala missense_variant 0.38 levofloxacin
moxifloxacin
gyrA 7676 c.375G>C synonymous_variant 0.39 levofloxacin
moxifloxacin
gyrA 7679 c.378G>C synonymous_variant 0.39 levofloxacin
moxifloxacin
gyrA 7683 c.382_384delAGGinsCGT synonymous_variant 0.39 levofloxacin
moxifloxacin
gyrA 7694 c.393A>G synonymous_variant 0.38 levofloxacin
moxifloxacin
gyrA 7697 c.396C>T synonymous_variant 0.36 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7703 c.402G>C synonymous_variant 0.33 levofloxacin
moxifloxacin
gyrA 7706 c.405C>G synonymous_variant 0.34 levofloxacin
moxifloxacin
gyrA 7710 c.409T>C synonymous_variant 0.33 levofloxacin
moxifloxacin
gyrA 7715 c.414G>C synonymous_variant 0.34 levofloxacin
moxifloxacin
gyrA 7725 c.424C>T synonymous_variant 0.35 levofloxacin Not assoc w R - Interim
moxifloxacin
gyrA 7728 c.427_429delAGGinsCGT synonymous_variant 0.36 levofloxacin
moxifloxacin
gyrA 7739 c.438C>T synonymous_variant 0.4 levofloxacin
moxifloxacin Not assoc w R - Interim
gyrA 7745 c.444G>A synonymous_variant 0.47 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7760 c.459C>T synonymous_variant 0.49 levofloxacin
moxifloxacin
gyrA 7763 c.462T>G synonymous_variant 0.47 levofloxacin
moxifloxacin
gyrA 7778 c.477G>C synonymous_variant 0.38 levofloxacin
moxifloxacin
gyrA 7781 c.480G>C synonymous_variant 0.39 levofloxacin
moxifloxacin
gyrA 7782 p.Gln161Met missense_variant 0.39 levofloxacin
moxifloxacin
gyrA 7797 c.496_498delCTAinsTTG synonymous_variant 0.39 levofloxacin
moxifloxacin
gyrA 7802 c.501C>G synonymous_variant 0.42 levofloxacin
moxifloxacin
gyrA 7811 c.510C>T synonymous_variant 0.42 levofloxacin
moxifloxacin
gyrA 7814 c.513C>G synonymous_variant 0.44 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7832 c.531G>T synonymous_variant 0.44 levofloxacin
moxifloxacin
gyrA 7835 c.534A>G synonymous_variant 0.44 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7841 c.540C>T synonymous_variant 0.44 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7847 c.546G>C synonymous_variant 0.45 levofloxacin
moxifloxacin
gyrA 7853 c.552C>T synonymous_variant 0.46 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 7859 c.558A>C synonymous_variant 0.47 levofloxacin
moxifloxacin
gyrA 7865 c.564T>C synonymous_variant 0.47 levofloxacin
moxifloxacin
gyrA 7868 p.Ile189Met missense_variant 0.47 levofloxacin Uncertain significance
moxifloxacin Uncertain significance
gyrA 7890 c.589_591delCTGinsTTA synonymous_variant 0.41 levofloxacin
moxifloxacin
gyrA 8783 c.1482G>C synonymous_variant 0.26 levofloxacin
moxifloxacin
gyrA 8786 c.1485T>G synonymous_variant 0.32 levofloxacin
moxifloxacin
gyrA 8792 c.1491G>C synonymous_variant 0.4 levofloxacin
moxifloxacin
gyrA 8799 p.Ala500Ser missense_variant 0.46 levofloxacin
moxifloxacin
gyrA 8810 c.1509A>G synonymous_variant 0.52 levofloxacin
moxifloxacin
gyrA 8817 p.Ser506Ala missense_variant 0.53 levofloxacin
moxifloxacin
gyrA 8828 c.1527T>C synonymous_variant 0.57 levofloxacin
moxifloxacin
gyrA 8829 c.1528_1530delTTGinsCTC synonymous_variant 0.58 levofloxacin
moxifloxacin
gyrA 8837 c.1536C>G synonymous_variant 0.63 levofloxacin
moxifloxacin
gyrA 8846 c.1545C>T synonymous_variant 0.63 levofloxacin
moxifloxacin
gyrA 8852 c.1551T>C synonymous_variant 0.63 levofloxacin
moxifloxacin
gyrA 8858 c.1557T>C synonymous_variant 0.66 levofloxacin
moxifloxacin
gyrA 8870 c.1569G>C synonymous_variant 0.7 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8873 c.1572A>G synonymous_variant 0.72 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8897 c.1596T>C synonymous_variant 0.73 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8903 c.1602T>C synonymous_variant 0.72 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8915 c.1614A>G synonymous_variant 0.76 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8942 c.1641G>C synonymous_variant 0.7 levofloxacin
moxifloxacin
gyrA 8945 c.1644G>C synonymous_variant 0.68 levofloxacin
moxifloxacin
gyrA 8946 c.1645T>C synonymous_variant 0.68 levofloxacin
moxifloxacin
gyrA 8967 p.Ala556Lys missense_variant 0.7 levofloxacin
moxifloxacin
gyrA 8978 c.1677C>T synonymous_variant 0.68 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8987 c.1686C>G synonymous_variant 0.66 levofloxacin
moxifloxacin
gyrA 8990 c.1689C>G synonymous_variant 0.64 levofloxacin
moxifloxacin
gyrA 8993 c.1692C>T synonymous_variant 0.64 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 8996 c.1695T>C synonymous_variant 0.64 levofloxacin
moxifloxacin
gyrA 8998 p.Leu566Trp missense_variant 0.66 levofloxacin Uncertain significance
moxifloxacin Uncertain significance
gyrA 9018 p.Gln573Lys missense_variant 0.61 levofloxacin
moxifloxacin
gyrA 9023 c.1722A>C synonymous_variant 0.6 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 9026 c.1725G>C synonymous_variant 0.57 levofloxacin
moxifloxacin
gyrA 9029 c.1728T>C synonymous_variant 0.57 levofloxacin
moxifloxacin
gyrA 9032 c.1731T>C synonymous_variant 0.57 levofloxacin
moxifloxacin
gyrA 9035 c.1734G>C synonymous_variant 0.55 levofloxacin Not assoc w R - Interim
moxifloxacin
gyrA 9044 c.1743C>G synonymous_variant 0.53 levofloxacin
moxifloxacin
gyrA 9047 c.1746C>T synonymous_variant 0.53 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R
gyrA 9062 c.1761C>T synonymous_variant 0.38 levofloxacin
moxifloxacin
gyrA 9063 p.Ser588Ala missense_variant 0.31 levofloxacin
moxifloxacin
gyrA 9068 c.1767G>C synonymous_variant 0.31 levofloxacin
moxifloxacin
gyrA 9071 c.1770G>C synonymous_variant 0.3 levofloxacin
moxifloxacin
gyrA 9080 c.1779G>C synonymous_variant 0.29 levofloxacin
moxifloxacin
gyrA 9089 c.1788G>C synonymous_variant 0.3 levofloxacin
moxifloxacin
gyrA 9095 c.1794C>T synonymous_variant 0.28 levofloxacin
moxifloxacin
gyrA 9099 c.1798_1800delTTAinsCTG synonymous_variant 0.26 levofloxacin
moxifloxacin
gyrA 9263 c.1962C>T synonymous_variant 0.34 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 9267 p.Asn656Gly missense_variant 0.35 levofloxacin
moxifloxacin
gyrA 9276 c.1975C>T synonymous_variant 0.44 levofloxacin Not assoc w R - Interim
moxifloxacin
gyrA 9281 c.1980C>G synonymous_variant 0.46 levofloxacin
moxifloxacin
gyrA 9296 c.1995T>C synonymous_variant 0.5 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 9304 p.Gly668Glu missense_variant 1.0 levofloxacin
moxifloxacin
gyrA 9311 c.2010C>T synonymous_variant 0.53 levofloxacin
moxifloxacin
gyrA 9330 p.Asn677His missense_variant 0.53 levofloxacin
moxifloxacin
gyrA 9345 c.2044_2046delAGGinsCGA synonymous_variant 0.54 levofloxacin
moxifloxacin
gyrA 9351 c.2050_2052delTCGinsAGT synonymous_variant 0.51 levofloxacin
moxifloxacin
gyrA 9356 c.2055G>C synonymous_variant 0.51 levofloxacin
moxifloxacin
gyrA 9377 c.2076A>G synonymous_variant 0.49 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 9383 c.2082T>C synonymous_variant 0.5 levofloxacin
moxifloxacin
gyrA 9386 c.2085T>C synonymous_variant 0.49 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
gyrA 9392 c.2091C>T synonymous_variant 0.5 levofloxacin
moxifloxacin
gyrA 9395 c.2094G>C synonymous_variant 0.47 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
fgd1 491039 p.Ile86Thr missense_variant 0.41 pretomanid
delamanid
clofazimine
fgd1 491043 c.261T>C synonymous_variant 0.39 pretomanid
delamanid
clofazimine
fgd1 491046 c.264G>A synonymous_variant 0.4 pretomanid
delamanid
clofazimine
fgd1 491049 c.267T>C synonymous_variant 0.4 pretomanid
delamanid
clofazimine
fgd1 491064 c.282A>G synonymous_variant 0.42 pretomanid
delamanid
clofazimine
fgd1 491077 p.Asn99Gly missense_variant 0.41 pretomanid
delamanid
clofazimine
fgd1 491082 c.300T>C synonymous_variant 0.39 pretomanid
delamanid
clofazimine
fgd1 491083 p.Val101Ile missense_variant 0.38 pretomanid
delamanid
clofazimine
fgd1 491091 c.309T>G synonymous_variant 0.38 pretomanid
delamanid
clofazimine
fgd1 491094 c.312C>A synonymous_variant 0.4 pretomanid
delamanid
clofazimine
fgd1 491097 c.315G>C synonymous_variant 0.39 pretomanid
delamanid
clofazimine
fgd1 491112 c.330G>C synonymous_variant 0.46 pretomanid
delamanid
clofazimine
fgd1 491115 c.333G>C synonymous_variant 0.45 pretomanid
delamanid
clofazimine
fgd1 491121 c.339A>G synonymous_variant 0.45 pretomanid
delamanid
clofazimine
fgd1 491137 p.Glu119Ile missense_variant 0.45 pretomanid
delamanid
clofazimine
fgd1 491144 p.Ala121Glu missense_variant 0.46 pretomanid
delamanid
clofazimine
fgd1 491166 c.384G>T synonymous_variant 0.45 pretomanid
delamanid
clofazimine
fgd1 491172 c.390C>G synonymous_variant 0.4 pretomanid
delamanid
clofazimine
fgd1 491184 c.402A>G synonymous_variant 0.3 pretomanid
delamanid
clofazimine
fgd1 491190 c.408G>C synonymous_variant 0.27 pretomanid
delamanid
clofazimine
fgd1 491191 p.Gly137Arg missense_variant 0.28 pretomanid
delamanid
clofazimine
fgd1 491196 c.414A>C synonymous_variant 0.25 pretomanid
delamanid
clofazimine
fgd1 491202 c.420G>C synonymous_variant 0.21 pretomanid
delamanid
clofazimine
fgd1 491203 p.Gln141Glu missense_variant 0.22 pretomanid
delamanid
clofazimine
fgd1 491213 p.Ser144Thr missense_variant 0.23 pretomanid
delamanid
clofazimine
fgd1 491220 p.Asp146Glu missense_variant 0.21 pretomanid
delamanid
clofazimine
mshA 575734 c.387T>G synonymous_variant 0.4 isoniazid
ethionamide
mshA 575737 c.390T>C synonymous_variant 0.37 isoniazid
ethionamide
mshA 575740 c.393G>T synonymous_variant 0.34 isoniazid
ethionamide
mshA 575743 c.396C>T synonymous_variant 0.34 isoniazid Not assoc w R - Interim
ethionamide Not assoc w R - Interim
mshA 575744 p.Ala133Thr missense_variant 0.34 isoniazid Uncertain significance
ethionamide
mshA 575755 c.408G>A synonymous_variant 0.36 isoniazid
ethionamide
mshA 575761 c.414C>G synonymous_variant 0.36 isoniazid
ethionamide
mshA 575767 c.420G>A synonymous_variant 0.37 isoniazid
ethionamide
mshA 575785 c.438T>C synonymous_variant 0.37 isoniazid
ethionamide
mshA 575792 p.Asp149Asn missense_variant 0.36 isoniazid
ethionamide
mshA 575795 p.Ile150Leu missense_variant 0.36 isoniazid
ethionamide
mshA 575800 c.453G>T synonymous_variant 0.34 isoniazid
ethionamide
mshA 575812 c.465C>T synonymous_variant 0.4 isoniazid
ethionamide
mshA 575818 c.471G>C synonymous_variant 0.4 isoniazid
ethionamide
mshA 575827 c.480G>A synonymous_variant 0.35 isoniazid
ethionamide
mshA 575829 p.Val161Ala missense_variant 0.35 isoniazid
ethionamide
ccsA 620029 c.139C>T synonymous_variant 0.83 kanamycin Not assoc w R - Interim
capreomycin Not assoc w R - Interim
amikacin Not assoc w R - Interim
ccsA 620311 p.Leu141Val missense_variant 0.31 kanamycin
capreomycin
amikacin
ccsA 620314 c.424C>T synonymous_variant 0.31 kanamycin Not assoc w R - Interim
capreomycin
amikacin Not assoc w R - Interim
ccsA 620317 p.Val143Ile missense_variant 0.31 kanamycin
capreomycin
amikacin
ccsA 620322 c.432G>C synonymous_variant 0.38 kanamycin
capreomycin
amikacin
ccsA 620328 c.438G>C synonymous_variant 0.42 kanamycin
capreomycin
amikacin
ccsA 620338 p.Thr150Ala missense_variant 0.44 kanamycin
capreomycin
amikacin
ccsA 620349 c.459A>C synonymous_variant 0.5 kanamycin
capreomycin
amikacin
ccsA 620354 p.Trp155Tyr missense_variant 0.49 kanamycin
capreomycin
amikacin
ccsA 620362 p.Ala158Thr missense_variant 0.5 kanamycin
capreomycin
amikacin
ccsA 620365 p.Asn159Tyr missense_variant 0.5 kanamycin
capreomycin
amikacin
ccsA 620388 c.498A>C synonymous_variant 0.5 kanamycin
capreomycin
amikacin
ccsA 620397 c.507C>G synonymous_variant 0.5 kanamycin
capreomycin
amikacin
ccsA 620412 c.522T>C synonymous_variant 0.51 kanamycin
capreomycin
amikacin
ccsA 620415 c.525T>C synonymous_variant 0.51 kanamycin Not assoc w R - Interim
capreomycin Not assoc w R - Interim
amikacin Not assoc w R - Interim
ccsA 620421 c.531G>C synonymous_variant 0.5 kanamycin
capreomycin
amikacin
ccsA 620430 c.540C>T synonymous_variant 0.5 kanamycin
capreomycin
amikacin
ccsA 620439 c.549T>G synonymous_variant 0.5 kanamycin
capreomycin
amikacin
ccsA 620442 c.552G>T synonymous_variant 0.48 kanamycin
capreomycin
amikacin
ccsA 620445 c.555A>T synonymous_variant 0.5 kanamycin
capreomycin
amikacin
ccsA 620454 c.564C>A synonymous_variant 0.35 kanamycin
capreomycin
amikacin
Rv0565c 657620 c.-150C>T upstream_gene_variant 0.23 ethionamide
Rv0565c 657698 c.-228C>T upstream_gene_variant 0.25 ethionamide
Rv0565c 657703 c.-233C>A upstream_gene_variant 0.25 ethionamide
Rv0565c 657708 c.-238C>A upstream_gene_variant 0.26 ethionamide
nusG 734397 p.Asp48Glu missense_variant 0.28 rifampicin
nusG 734407 p.Val52Ile missense_variant 0.33 rifampicin
nusG 734415 c.162C>G synonymous_variant 0.34 rifampicin
nusG 734418 c.165C>T synonymous_variant 0.35 rifampicin Not assoc w R - Interim
nusG 734421 c.168A>C synonymous_variant 0.36 rifampicin
nusG 734424 c.171G>A synonymous_variant 0.43 rifampicin
nusG 734445 c.192C>G synonymous_variant 0.56 rifampicin Not assoc w R - Interim
nusG 734452 p.Glu67Gln missense_variant 0.57 rifampicin Uncertain significance
nusG 734460 c.207G>T synonymous_variant 0.57 rifampicin Not assoc w R - Interim
nusG 734472 c.219T>G synonymous_variant 0.62 rifampicin Not assoc w R - Interim
nusG 734475 c.222T>C synonymous_variant 0.62 rifampicin Not assoc w R - Interim
nusG 734497 p.Val82Ile missense_variant 0.63 rifampicin Uncertain significance
nusG 734532 c.279A>G synonymous_variant 0.54 rifampicin Not assoc w R - Interim
nusG 734535 c.282C>T synonymous_variant 0.55 rifampicin Not assoc w R - Interim
nusG 734538 c.285C>T synonymous_variant 0.54 rifampicin Not assoc w R - Interim
nusG 734541 c.288A>G synonymous_variant 0.55 rifampicin Not assoc w R - Interim
nusG 734559 c.306T>G synonymous_variant 0.53 rifampicin Not assoc w R - Interim
nusG 734580 c.327T>C synonymous_variant 0.41 rifampicin Not assoc w R - Interim
nusG 734586 c.333G>C synonymous_variant 0.31 rifampicin
nusG 734589 c.336G>A synonymous_variant 0.3 rifampicin
nusG 734794 p.Val181Ile missense_variant 0.26 rifampicin Uncertain significance
nusG 734807 p.Tyr185Phe missense_variant 0.26 rifampicin
nusG 734820 c.567A>G synonymous_variant 0.24 rifampicin Not assoc w R - Interim
nusG 734826 c.573A>C synonymous_variant 0.24 rifampicin
nusG 734834 p.Met194Thr missense_variant 0.25 rifampicin Uncertain significance
nusG 734841 c.588G>T synonymous_variant 0.27 rifampicin
nusG 734847 c.594T>C synonymous_variant 0.27 rifampicin
nusG 734850 c.597C>G synonymous_variant 0.28 rifampicin
nusG 734853 c.600A>G synonymous_variant 0.27 rifampicin
nusG 734854 c.601T>C synonymous_variant 0.27 rifampicin
nusG 734859 c.606G>C synonymous_variant 0.26 rifampicin
nusG 734864 p.Thr204Ser missense_variant 0.27 rifampicin
nusG 734889 c.636G>A synonymous_variant 0.26 rifampicin
nusG 734893 p.Lys214Arg missense_variant 0.25 rifampicin
nusG 734910 c.657C>G synonymous_variant 0.26 rifampicin
rpoB 760079 c.273G>A synonymous_variant 0.39 rifampicin
rpoB 760091 c.285G>C synonymous_variant 0.53 rifampicin Not assoc w R - Interim
rpoB 760101 c.295T>C synonymous_variant 0.57 rifampicin Not assoc w R - Interim
rpoB 760110 c.304_306delTCTinsAGC synonymous_variant 0.61 rifampicin Not assoc w R - Interim
rpoB 760118 c.312T>G synonymous_variant 0.62 rifampicin Not assoc w R - Interim
rpoB 760121 c.315T>C synonymous_variant 0.62 rifampicin Not assoc w R - Interim
rpoB 760127 c.321C>T synonymous_variant 0.62 rifampicin
rpoB 760130 p.Asp108Glu missense_variant 0.66 rifampicin Uncertain significance
rpoB 760139 c.333A>G synonymous_variant 0.69 rifampicin Not assoc w R - Interim
rpoB 760181 c.375T>C synonymous_variant 0.75 rifampicin Not assoc w R - Interim
rpoB 760184 c.378A>G synonymous_variant 0.74 rifampicin Not assoc w R - Interim
rpoB 760196 c.390C>G synonymous_variant 0.75 rifampicin Not assoc w R - Interim
rpoB 760235 c.429T>C synonymous_variant 0.7 rifampicin Not assoc w R - Interim
rpoB 760244 c.438G>C synonymous_variant 0.65 rifampicin Not assoc w R - Interim
rpoB 760256 c.450C>T synonymous_variant 0.65 rifampicin Not assoc w R - Interim
rpoB 760274 p.Glu156Asp missense_variant 0.66 rifampicin Uncertain significance
rpoB 760276 p.Lys157Met missense_variant 0.64 rifampicin Uncertain significance
rpoB 760283 c.477G>C synonymous_variant 0.64 rifampicin Not assoc w R - Interim
rpoB 760298 c.492G>C synonymous_variant 0.62 rifampicin Not assoc w R - Interim
rpoB 760307 c.501T>C synonymous_variant 0.56 rifampicin
rpoB 760313 c.507G>C synonymous_variant 0.53 rifampicin
rpoB 760317 c.511_513delAGCinsTCG synonymous_variant 0.45 rifampicin
rpoB 760325 c.519G>C synonymous_variant 0.47 rifampicin Not assoc w R - Interim
rpoB 760328 c.522G>C synonymous_variant 0.5 rifampicin
rpoB 760331 c.525G>T synonymous_variant 0.5 rifampicin
rpoB 760337 c.531C>G synonymous_variant 0.5 rifampicin
rpoB 760340 c.534G>T synonymous_variant 0.53 rifampicin Not assoc w R - Interim
rpoB 760343 c.537G>C synonymous_variant 0.59 rifampicin
rpoB 760357 p.Thr184Ser missense_variant 0.66 rifampicin Uncertain significance
rpoB 760361 c.555T>C synonymous_variant 0.69 rifampicin Not assoc w R - Interim
rpoB 760370 c.564C>G synonymous_variant 0.76 rifampicin
rpoB 760376 p.Asp190Glu missense_variant 0.78 rifampicin Uncertain significance
rpoB 760382 c.576G>C synonymous_variant 0.8 rifampicin
rpoB 760388 c.582C>T synonymous_variant 0.83 rifampicin
rpoB 760400 c.594G>C synonymous_variant 0.82 rifampicin Not assoc w R - Interim
rpoB 760406 c.600G>C synonymous_variant 0.79 rifampicin
rpoB 760407 p.Ser201Gly missense_variant 0.79 rifampicin Uncertain significance
rpoB 760415 c.609C>T synonymous_variant 0.83 rifampicin Not assoc w R - Interim
rpoB 760418 c.612G>C synonymous_variant 0.82 rifampicin Not assoc w R - Interim
rpoB 760430 c.624T>C synonymous_variant 0.84 rifampicin Not assoc w R - Interim
rpoB 760460 c.654G>C synonymous_variant 0.85 rifampicin Not assoc w R - Interim
rpoB 760475 c.669A>G synonymous_variant 0.86 rifampicin Not assoc w R - Interim
rpoB 760481 c.675G>C synonymous_variant 0.85 rifampicin Not assoc w R - Interim
rpoB 760484 c.678A>G synonymous_variant 0.86 rifampicin Not assoc w R - Interim
rpoB 760502 c.696C>G synonymous_variant 0.87 rifampicin Not assoc w R - Interim
rpoB 760522 p.Ser239Asn missense_variant 0.86 rifampicin Uncertain significance
rpoB 760532 c.726T>C synonymous_variant 0.84 rifampicin Not assoc w R - Interim
rpoB 760541 c.735G>C synonymous_variant 0.82 rifampicin Not assoc w R - Interim
rpoB 760561 c.757_758delCG frameshift_variant 0.73 rifampicin
rpoB 760567 p.Ser254Trp missense_variant 0.73 rifampicin
rpoB 760568 c.762_763insGC frameshift_variant 0.73 rifampicin
rpoB 760571 c.765G>C synonymous_variant 0.72 rifampicin
rpoB 760588 p.Thr261Ile missense_variant 0.72 rifampicin
rpoB 760591 p.Val262Ala missense_variant 0.71 rifampicin
rpoB 760595 c.789C>T synonymous_variant 0.72 rifampicin
rpoB 760596 p.Thr264Pro missense_variant 0.73 rifampicin
rpoB 760608 c.802C>T synonymous_variant 0.76 rifampicin Not assoc w R - Interim
rpoB 760611 c.805T>C synonymous_variant 0.76 rifampicin Not assoc w R - Interim
rpoB 760634 c.828T>C synonymous_variant 0.72 rifampicin Not assoc w R - Interim
rpoB 760646 c.840C>G synonymous_variant 0.7 rifampicin Not assoc w R - Interim
rpoB 760655 c.849A>G synonymous_variant 0.67 rifampicin Not assoc w R - Interim
rpoB 760661 c.855A>G synonymous_variant 0.62 rifampicin Not assoc w R - Interim
rpoB 760668 p.Thr288Ala missense_variant 0.61 rifampicin Uncertain significance
rpoB 760674 c.868T>C synonymous_variant 0.63 rifampicin Not assoc w R - Interim
rpoB 760679 c.873A>G synonymous_variant 0.61 rifampicin Not assoc w R - Interim
rpoB 760683 c.877T>C synonymous_variant 0.61 rifampicin Not assoc w R - Interim
rpoB 760703 c.897C>T synonymous_variant 0.59 rifampicin Not assoc w R - Interim
rpoB 760721 c.915C>G synonymous_variant 0.57 rifampicin
rpoB 760727 c.921C>G synonymous_variant 0.45 rifampicin
rpoB 760730 c.924T>C synonymous_variant 0.41 rifampicin Not assoc w R - Interim
rpoB 760736 c.930C>G synonymous_variant 0.44 rifampicin
rpoB 760805 c.999G>C synonymous_variant 0.62 rifampicin
rpoB 760817 c.1011A>G synonymous_variant 0.67 rifampicin
rpoB 760820 c.1014T>C synonymous_variant 0.68 rifampicin
rpoB 760826 c.1020C>G synonymous_variant 0.68 rifampicin Not assoc w R - Interim
rpoB 760830 c.1024T>C synonymous_variant 0.73 rifampicin Not assoc w R - Interim
rpoB 760841 c.1035T>C synonymous_variant 0.75 rifampicin Not assoc w R - Interim
rpoB 760858 p.Val351Ala missense_variant 0.73 rifampicin Uncertain significance
rpoB 760862 c.1056G>C synonymous_variant 0.75 rifampicin Not assoc w R - Interim
rpoB 760865 c.1059C>T synonymous_variant 0.76 rifampicin Not assoc w R - Interim
rpoB 760886 p.Glu360Asp missense_variant 0.77 rifampicin Uncertain significance
rpoB 760887 p.Thr361Val missense_variant 0.77 rifampicin Uncertain significance
rpoB 760910 c.1104C>T synonymous_variant 0.78 rifampicin Not assoc w R - Interim
rpoB 760916 c.1110C>T synonymous_variant 0.78 rifampicin Not assoc w R - Interim
rpoB 760928 c.1122G>C synonymous_variant 0.77 rifampicin Not assoc w R - Interim
rpoB 760943 c.1137C>T synonymous_variant 0.76 rifampicin Not assoc w R - Interim
rpoB 760946 c.1140A>G synonymous_variant 0.78 rifampicin Not assoc w R - Interim
rpoB 760965 p.Met387Leu missense_variant 0.77 rifampicin Uncertain significance
rpoB 760970 c.1164G>C synonymous_variant 0.76 rifampicin Not assoc w R - Interim
rpoB 760973 c.1167G>T synonymous_variant 0.77 rifampicin Not assoc w R - Interim
rpoB 760982 c.1176G>C synonymous_variant 0.74 rifampicin Not assoc w R - Interim
rpoB 760985 c.1179G>C synonymous_variant 0.74 rifampicin Not assoc w R - Interim
rpoB 760988 c.1182C>G synonymous_variant 0.74 rifampicin Not assoc w R - Interim
rpoB 760991 c.1185G>T synonymous_variant 0.76 rifampicin Not assoc w R - Interim
rpoB 760997 c.1191G>C synonymous_variant 0.78 rifampicin Not assoc w R - Interim
rpoB 761006 c.1200C>G synonymous_variant 0.84 rifampicin Not assoc w R - Interim
rpoB 761015 c.1209G>C synonymous_variant 0.82 rifampicin Not assoc w R - Interim
rpoB 761027 c.1221A>C synonymous_variant 0.83 rifampicin Not assoc w R - Interim
rpoB 761036 c.1230G>C synonymous_variant 0.83 rifampicin Not assoc w R - Interim
rpoB 761037 c.1231T>C synonymous_variant 0.83 rifampicin Not assoc w R - Interim
rpoB 761051 c.1245G>T synonymous_variant 0.84 rifampicin Not assoc w R - Interim
rpoB 761054 c.1248G>C synonymous_variant 0.84 rifampicin Not assoc w R - Interim
rpoB 761060 c.1254C>G synonymous_variant 0.85 rifampicin Not assoc w R - Interim
rpoB 761063 c.1257C>G synonymous_variant 0.85 rifampicin Not assoc w R - Interim
rpoB 761084 c.1278C>A synonymous_variant 0.85 rifampicin Not assoc w R - Interim
rpoB 761097 c.1291_1293delAGCinsTCG synonymous_variant 0.82 rifampicin
rpoB 761102 c.1296A>G synonymous_variant 0.82 rifampicin
rpoB 761105 c.1299C>T synonymous_variant 0.8 rifampicin Not assoc w R - Interim
rpoB 761132 c.1326G>C synonymous_variant 0.83 rifampicin Not assoc w R - Interim
rpoB 761133 c.1327T>C synonymous_variant 0.84 rifampicin Not assoc w R - Interim
rpoB 761147 c.1341C>T synonymous_variant 0.83 rifampicin Not assoc w R - Interim
rpoB 761150 c.1344A>T synonymous_variant 0.82 rifampicin Not assoc w R - Interim
rpoB 761165 c.1359G>C synonymous_variant 0.84 rifampicin Not assoc w R - Interim
rpoB 761171 c.1365C>T synonymous_variant 0.86 rifampicin Not assoc w R - Interim
rpoB 761178 p.Ser458Thr missense_variant 0.84 rifampicin Uncertain significance
rpoB 761186 p.Glu460Asp missense_variant 0.84 rifampicin Uncertain significance
rpoB 761189 c.1383T>C synonymous_variant 0.83 rifampicin Not assoc w R - Interim
rpoB 761195 c.1389G>C synonymous_variant 0.82 rifampicin Not assoc w R - Interim
rpoB 761198 c.1392G>C synonymous_variant 0.83 rifampicin Not assoc w R - Interim
rpoB 761219 c.1413G>C synonymous_variant 0.83 rifampicin Not assoc w R - Interim
rpoB 761234 c.1428G>C synonymous_variant 0.83 rifampicin Not assoc w R - Interim
rpoB 761249 c.1443A>G synonymous_variant 0.85 rifampicin Not assoc w R - Interim
rpoB 761255 c.1449T>G synonymous_variant 0.83 rifampicin Not assoc w R - Interim
rpoB 761258 c.1452G>A synonymous_variant 0.79 rifampicin Not assoc w R - Interim
rpoB 761261 c.1455G>C synonymous_variant 0.76 rifampicin Not assoc w R - Interim
rpoB 761264 c.1458C>G synonymous_variant 0.79 rifampicin Not assoc w R - Interim
rpoB 761273 c.1467T>C synonymous_variant 0.82 rifampicin Not assoc w R - Interim
rpoB 761303 c.1497G>C synonymous_variant 0.66 rifampicin Not assoc w R - Interim
rpoB 761318 c.1512G>T synonymous_variant 0.57 rifampicin Not assoc w R - Interim
rpoB 761327 c.1521A>G synonymous_variant 0.54 rifampicin Not assoc w R - Interim
rpoB 761333 c.1527G>T synonymous_variant 0.53 rifampicin Not assoc w R - Interim
rpoB 761339 c.1533C>G synonymous_variant 0.52 rifampicin Not assoc w R - Interim
rpoB 761345 c.1539G>C synonymous_variant 0.44 rifampicin
rpoB 761346 p.Val514Ser missense_variant 0.37 rifampicin
rpoB 761354 c.1548C>A synonymous_variant 0.37 rifampicin
rpoB 761357 c.1551G>T synonymous_variant 0.35 rifampicin
rpoB 761360 c.1554T>C synonymous_variant 0.33 rifampicin Not assoc w R - Interim
rpoB 761362 p.Ser519Thr missense_variant 0.34 rifampicin
rpoB 761373 p.Val523His missense_variant 0.36 rifampicin
rpoB 761384 c.1578C>G synonymous_variant 0.34 rifampicin
rpoB 761393 c.1587G>A synonymous_variant 0.37 rifampicin Not assoc w R - Interim
rpoB 761414 c.1608A>G synonymous_variant 0.32 rifampicin Not assoc w R - Interim
rpoB 761516 c.1710G>C synonymous_variant 0.61 rifampicin
rpoB 761528 c.1722C>T synonymous_variant 0.63 rifampicin
rpoB 761531 c.1725C>T synonymous_variant 0.64 rifampicin Not assoc w R - Interim
rpoB 761537 c.1731C>G synonymous_variant 0.67 rifampicin Not assoc w R - Interim
rpoB 761555 c.1749G>C synonymous_variant 0.6 rifampicin Not assoc w R - Interim
rpoB 761558 c.1752C>G synonymous_variant 0.65 rifampicin Not assoc w R - Interim
rpoB 761564 c.1758G>C synonymous_variant 0.69 rifampicin Not assoc w R - Interim
rpoB 761570 c.1764T>C synonymous_variant 0.71 rifampicin Not assoc w R - Interim
rpoB 761573 c.1767C>G synonymous_variant 0.72 rifampicin Not assoc w R - Interim
rpoB 761579 c.1773G>C synonymous_variant 0.73 rifampicin Not assoc w R - Interim
rpoB 761612 c.1806G>T synonymous_variant 0.73 rifampicin Not assoc w R - Interim
rpoB 761615 c.1809A>C synonymous_variant 0.73 rifampicin Not assoc w R - Interim
rpoB 761636 c.1830G>T synonymous_variant 0.72 rifampicin Not assoc w R - Interim
rpoB 761645 c.1839C>G synonymous_variant 0.72 rifampicin Not assoc w R - Interim
rpoB 761657 c.1851C>T synonymous_variant 0.73 rifampicin Not assoc w R - Interim
rpoB 761666 c.1860G>C synonymous_variant 0.7 rifampicin
rpoB 761669 c.1863C>T synonymous_variant 0.66 rifampicin
rpoB 761675 c.1869G>T synonymous_variant 0.65 rifampicin
rpoB 761681 c.1875G>A synonymous_variant 0.64 rifampicin
rpoB 761682 c.1876C>T synonymous_variant 0.64 rifampicin
rpoB 761687 c.1881C>T synonymous_variant 0.63 rifampicin
rpoB 761690 c.1884G>C synonymous_variant 0.64 rifampicin
rpoB 761693 c.1887G>C synonymous_variant 0.64 rifampicin
rpoB 761705 c.1899C>A synonymous_variant 0.72 rifampicin Not assoc w R - Interim
rpoB 761720 c.1914C>G synonymous_variant 0.44 rifampicin
rpoB 761723 c.1917A>G synonymous_variant 0.34 rifampicin
rpoB 761724 p.Glu640Lys missense_variant 0.34 rifampicin
rpoB 761727 p.Ser641Ala missense_variant 0.53 rifampicin
rpoB 761732 c.1926C>T synonymous_variant 0.57 rifampicin Not assoc w R - Interim
rpoB 761741 c.1935G>A synonymous_variant 0.55 rifampicin
rpoB 761750 c.1944G>T synonymous_variant 0.62 rifampicin
rpoB 761760 p.Ile652Val missense_variant 0.68 rifampicin
rpoB 761765 c.1959T>C synonymous_variant 0.65 rifampicin
rpoB 761772 p.His656Ala missense_variant 0.61 rifampicin
rpoB 761778 p.Asn658Asp missense_variant 0.62 rifampicin
rpoB 761791 p.Arg662Gln missense_variant 0.53 rifampicin
rpoB 761794 p.Thr663Ser missense_variant 0.53 rifampicin
rpoB 761802 p.Met666Leu missense_variant 0.49 rifampicin
rpoB 761813 c.2007T>C synonymous_variant 0.47 rifampicin
rpoB 761819 c.2013G>C synonymous_variant 0.51 rifampicin
rpoB 761834 c.2028T>C synonymous_variant 0.61 rifampicin
rpoB 761847 p.Cys681Lys missense_variant 0.55 rifampicin
rpoB 761863 p.Ala686Glu missense_variant 0.57 rifampicin
rpoB 761867 c.2061C>G synonymous_variant 0.58 rifampicin
rpoB 761868 p.Asp688Gln missense_variant 0.57 rifampicin
rpoB 761873 c.2067A>G synonymous_variant 0.57 rifampicin
rpoB 761891 c.2085G>C synonymous_variant 0.6 rifampicin
rpoB 761909 c.2103T>C synonymous_variant 0.62 rifampicin
rpoB 761912 c.2106T>C synonymous_variant 0.6 rifampicin
rpoB 761915 p.Asp703Glu missense_variant 0.59 rifampicin
rpoB 761916 p.Asp704Asn missense_variant 0.61 rifampicin
rpoB 761924 c.2118G>A synonymous_variant 0.66 rifampicin
rpoB 761930 c.2124G>C synonymous_variant 0.69 rifampicin
rpoB 761933 c.2127G>C synonymous_variant 0.7 rifampicin
rpoB 761936 c.2130C>T synonymous_variant 0.72 rifampicin
rpoB 761948 c.2142G>C synonymous_variant 0.75 rifampicin Not assoc w R - Interim
rpoB 761954 c.2148C>A synonymous_variant 0.75 rifampicin
rpoB 761955 p.Ile717Val missense_variant 0.75 rifampicin Uncertain significance
rpoB 761969 c.2163G>A synonymous_variant 0.78 rifampicin Not assoc w R - Interim
rpoB 761990 c.2184G>C synonymous_variant 0.81 rifampicin Not assoc w R - Interim
rpoB 762008 c.2202C>T synonymous_variant 0.78 rifampicin Not assoc w R - Interim
rpoB 762014 c.2208C>G synonymous_variant 0.77 rifampicin Not assoc w R - Interim
rpoB 762038 c.2232C>T synonymous_variant 0.76 rifampicin Not assoc w R - Interim
rpoB 762047 c.2241G>A synonymous_variant 0.76 rifampicin Not assoc w R - Interim
rpoB 762053 c.2247T>C synonymous_variant 0.77 rifampicin Not assoc w R - Interim
rpoB 762056 c.2250G>A synonymous_variant 0.77 rifampicin Not assoc w R - Interim
rpoB 762065 c.2259T>G synonymous_variant 0.78 rifampicin Not assoc w R - Interim
rpoB 762083 c.2277T>C synonymous_variant 0.76 rifampicin Not assoc w R - Interim
rpoB 762086 c.2280G>C synonymous_variant 0.75 rifampicin Not assoc w R - Interim
rpoB 762101 c.2295C>G synonymous_variant 0.77 rifampicin Not assoc w R - Interim
rpoB 762114 p.Ile770Val missense_variant 0.78 rifampicin Uncertain significance
rpoB 762122 c.2316C>T synonymous_variant 0.76 rifampicin
rpoB 762131 c.2325C>G synonymous_variant 0.73 rifampicin
rpoB 762134 c.2328C>A synonymous_variant 0.72 rifampicin
rpoB 762137 c.2331C>T synonymous_variant 0.72 rifampicin Not assoc w R - Interim
rpoB 762140 c.2334G>C synonymous_variant 0.73 rifampicin
rpoB 762143 c.2337T>C synonymous_variant 0.73 rifampicin
rpoB 762149 c.2343G>T synonymous_variant 0.74 rifampicin Not assoc w R - Interim
rpoB 762158 c.2352G>C synonymous_variant 0.75 rifampicin Not assoc w R - Interim
rpoB 762167 c.2361T>C synonymous_variant 0.76 rifampicin Not assoc w R - Interim
rpoB 762176 c.2370T>C synonymous_variant 0.77 rifampicin Not assoc w R - Interim
rpoB 762185 c.2379G>C synonymous_variant 0.75 rifampicin Not assoc w R - Interim
rpoB 762194 c.2388G>C synonymous_variant 0.78 rifampicin Not assoc w R - Interim
rpoB 762233 c.2427G>C synonymous_variant 0.72 rifampicin Not assoc w R - Interim
rpoB 762236 c.2430G>C synonymous_variant 0.73 rifampicin Not assoc w R - Interim
rpoB 762245 c.2439G>C synonymous_variant 0.71 rifampicin Not assoc w R - Interim
rpoB 762275 c.2469C>T synonymous_variant 0.63 rifampicin Not assoc w R - Interim
rpoB 762284 c.2478G>C synonymous_variant 0.66 rifampicin Not assoc w R - Interim
rpoB 762293 c.2487T>C synonymous_variant 0.65 rifampicin Not assoc w R - Interim
rpoB 762296 c.2490G>C synonymous_variant 0.65 rifampicin Not assoc w R - Interim
rpoB 762317 c.2511A>G synonymous_variant 0.68 rifampicin Not assoc w R - Interim
rpoB 762323 c.2517C>A synonymous_variant 0.66 rifampicin Not assoc w R - Interim
rpoB 762329 c.2523G>C synonymous_variant 0.63 rifampicin Not assoc w R - Interim
rpoB 762338 c.2532T>C synonymous_variant 0.6 rifampicin
rpoB 762341 c.2535G>C synonymous_variant 0.57 rifampicin
rpoB 762347 c.2541T>C synonymous_variant 0.54 rifampicin
rpoB 762350 c.2544C>G synonymous_variant 0.56 rifampicin
rpoB 762353 c.2547C>T synonymous_variant 0.54 rifampicin
rpoB 762356 p.Glu850Asp missense_variant 0.54 rifampicin
rpoB 762362 p.Glu852Asp missense_variant 0.54 rifampicin
rpoB 762368 p.Glu854Asp missense_variant 0.51 rifampicin
rpoB 762369 c.2563T>C synonymous_variant 0.51 rifampicin
rpoC 762374 c.-996G>T upstream_gene_variant 0.49 rifampicin
rpoC 762380 c.-990T>C upstream_gene_variant 0.5 rifampicin
rpoC 762383 c.-987C>G upstream_gene_variant 0.51 rifampicin
rpoC 762386 c.-984C>T upstream_gene_variant 0.51 rifampicin
rpoC 762392 c.-978G>C upstream_gene_variant 0.51 rifampicin
rpoC 762395 c.-975G>T upstream_gene_variant 0.54 rifampicin
rpoC 762398 c.-972T>C upstream_gene_variant 0.57 rifampicin
rpoB 762404 c.2598T>C synonymous_variant 0.64 rifampicin Not assoc w R - Interim
rpoB 762410 c.2604T>G synonymous_variant 0.67 rifampicin Not assoc w R - Interim
rpoB 762416 c.2610A>G synonymous_variant 0.69 rifampicin Not assoc w R - Interim
rpoB 762449 c.2643C>A synonymous_variant 0.72 rifampicin Not assoc w R - Interim
rpoB 762452 c.2646G>C synonymous_variant 0.71 rifampicin Not assoc w R - Interim
rpoB 762470 c.2664G>C synonymous_variant 0.68 rifampicin Not assoc w R - Interim
rpoB 762488 c.2682G>C synonymous_variant 0.66 rifampicin Not assoc w R - Interim
rpoB 762491 c.2685T>C synonymous_variant 0.66 rifampicin Not assoc w R - Interim
rpoC 762509 c.-861T>G upstream_gene_variant 0.65 rifampicin
rpoB 762510 p.Ala902Pro missense_variant 0.65 rifampicin Uncertain significance
rpoB 762515 c.2709C>T synonymous_variant 0.64 rifampicin Not assoc w R - Interim
rpoC 762533 c.-837T>C upstream_gene_variant 0.7 rifampicin
rpoC 762536 c.-834T>C upstream_gene_variant 0.7 rifampicin
rpoC 762537 c.-833T>C upstream_gene_variant 0.7 rifampicin
rpoC 762551 c.-819C>T upstream_gene_variant 0.63 rifampicin
rpoC 762557 c.-813G>A upstream_gene_variant 0.53 rifampicin
rpoC 762560 c.-810A>C upstream_gene_variant 0.51 rifampicin
rpoC 762563 c.-807G>T upstream_gene_variant 0.49 rifampicin
rpoB 762830 c.3024C>G synonymous_variant 0.28 rifampicin Not assoc w R - Interim
rpoB 762857 c.3051C>G synonymous_variant 0.67 rifampicin Not assoc w R - Interim
rpoB 762860 c.3054G>C synonymous_variant 0.67 rifampicin Not assoc w R - Interim
rpoB 762863 c.3057T>C synonymous_variant 0.69 rifampicin Not assoc w R - Interim
rpoB 762866 c.3060C>T synonymous_variant 0.67 rifampicin Not assoc w R - Interim
rpoB 762879 p.Met1025Leu missense_variant 0.72 rifampicin Uncertain significance
rpoB 762894 c.3088C>T synonymous_variant 0.72 rifampicin Not assoc w R - Interim
rpoB 762899 c.3093G>C synonymous_variant 0.74 rifampicin Not assoc w R - Interim
rpoB 762917 c.3111C>G synonymous_variant 0.79 rifampicin Not assoc w R - Interim
rpoB 762920 c.3114C>T synonymous_variant 0.79 rifampicin Not assoc w R - Interim
rpoB 762923 c.3117C>G synonymous_variant 0.8 rifampicin Not assoc w R - Interim
rpoB 762929 c.3123G>C synonymous_variant 0.8 rifampicin Not assoc w R - Interim
rpoB 762959 c.3153G>C synonymous_variant 0.85 rifampicin Not assoc w R - Interim
rpoB 762962 c.3156C>T synonymous_variant 0.86 rifampicin Not assoc w R - Interim
rpoB 762995 c.3189G>T synonymous_variant 0.85 rifampicin Not assoc w R - Interim
rpoB 763031 c.3225T>G synonymous_variant 0.85 rifampicin Not assoc w R - Interim
rpoB 763034 c.3228C>G synonymous_variant 0.85 rifampicin Not assoc w R - Interim
rpoB 763040 c.3234C>G synonymous_variant 0.86 rifampicin Not assoc w R - Interim
rpoB 763070 c.3264T>C synonymous_variant 0.85 rifampicin Not assoc w R - Interim
rpoB 763082 c.3276C>T synonymous_variant 0.83 rifampicin Not assoc w R - Interim
rpoB 763088 c.3282C>G synonymous_variant 0.81 rifampicin Not assoc w R - Interim
rpoB 763094 c.3288G>C synonymous_variant 0.81 rifampicin Not assoc w R - Interim
rpoB 763115 c.3309T>C synonymous_variant 0.77 rifampicin Not assoc w R - Interim
rpoB 763127 c.3321G>C synonymous_variant 0.73 rifampicin Not assoc w R - Interim
rpoB 763136 c.3330C>T synonymous_variant 0.74 rifampicin Not assoc w R - Interim
rpoB 763145 c.3339G>A synonymous_variant 0.76 rifampicin Not assoc w R - Interim
rpoB 763157 c.3351G>T synonymous_variant 0.79 rifampicin Not assoc w R - Interim
rpoB 763166 c.3360A>G synonymous_variant 0.8 rifampicin Not assoc w R - Interim
rpoB 763172 c.3366G>C synonymous_variant 0.77 rifampicin Not assoc w R - Interim
rpoB 763193 c.3387C>G synonymous_variant 0.67 rifampicin Not assoc w R - Interim
rpoC 763202 c.-168A>G upstream_gene_variant 0.6 rifampicin
rpoC 763205 c.-165G>C upstream_gene_variant 0.59 rifampicin
rpoB 763207 p.Ser1134Lys missense_variant 0.59 rifampicin Uncertain significance
rpoB 763214 c.3408T>C synonymous_variant 0.59 rifampicin Not assoc w R - Interim
rpoC 763217 c.-153G>C upstream_gene_variant 0.59 rifampicin
rpoC 763220 c.-150G>C upstream_gene_variant 0.58 rifampicin
rpoC 763226 c.-144A>G upstream_gene_variant 0.57 rifampicin
rpoB 763227 p.Leu1141Met missense_variant 0.55 rifampicin
rpoB 763235 p.Glu1143Asp missense_variant 0.52 rifampicin
rpoB 763238 c.3432T>C synonymous_variant 0.52 rifampicin Not assoc w R - Interim
rpoB 763241 p.Glu1145Asp missense_variant 0.52 rifampicin
rpoC 763259 c.-111G>C upstream_gene_variant 0.53 rifampicin
rpoC 763262 c.-108C>T upstream_gene_variant 0.53 rifampicin
rpoC 763265 c.-105G>C upstream_gene_variant 0.53 rifampicin
rpoB 763268 c.3462C>G synonymous_variant 0.51 rifampicin Not assoc w R - Interim
rpoB 763283 c.3477T>C synonymous_variant 0.44 rifampicin Not assoc w R - Interim
rpoC 763365 c.-5_-4insT upstream_gene_variant 0.33 rifampicin Uncertain significance
rpoC 763402 c.33C>T synonymous_variant 0.57 rifampicin Not assoc w R - Interim
rpoC 763408 c.39T>C synonymous_variant 0.56 rifampicin Not assoc w R - Interim
rpoC 763411 c.42T>C synonymous_variant 0.56 rifampicin
rpoC 763414 c.45T>G synonymous_variant 0.56 rifampicin Not assoc w R - Interim
rpoC 763415 p.Thr16Ser missense_variant 0.56 rifampicin Uncertain significance
rpoC 763423 p.Glu18Asp missense_variant 0.6 rifampicin Uncertain significance
rpoC 763430 c.61_63delAGGinsCGA synonymous_variant 0.6 rifampicin
rpoC 763433 p.Gln22Asn missense_variant 0.57 rifampicin
rpoC 763443 p.Tyr25Phe missense_variant 0.6 rifampicin
rpoC 763450 c.81G>A synonymous_variant 0.67 rifampicin Not assoc w R - Interim
rpoC 763456 c.87A>G synonymous_variant 0.69 rifampicin Not assoc w R - Interim
rpoC 763468 c.99G>C synonymous_variant 0.69 rifampicin Not assoc w R - Interim
rpoC 763486 c.117T>C synonymous_variant 0.75 rifampicin Not assoc w R - Interim
rpoC 763492 c.123G>C synonymous_variant 0.77 rifampicin Not assoc w R - Interim
rpoC 763528 c.159G>A synonymous_variant 0.78 rifampicin Not assoc w R - Interim
rpoC 763531 c.162G>T synonymous_variant 0.8 rifampicin Not assoc w R - Interim
rpoC 763546 c.177A>G synonymous_variant 0.84 rifampicin Not assoc w R - Interim
rpoC 763570 c.201G>C synonymous_variant 0.84 rifampicin Not assoc w R - Interim
rpoC 763594 c.225C>T synonymous_variant 0.84 rifampicin Not assoc w R - Interim
rpoC 763633 c.264T>C synonymous_variant 0.84 rifampicin Not assoc w R - Interim
rpoC 763657 c.288G>A synonymous_variant 0.8 rifampicin Not assoc w R - Interim
rpoC 763660 c.291T>G synonymous_variant 0.78 rifampicin Not assoc w R - Interim
rpoC 763666 c.297G>C synonymous_variant 0.78 rifampicin Not assoc w R - Interim
rpoC 763669 c.300C>G synonymous_variant 0.76 rifampicin Not assoc w R - Interim
rpoC 763675 c.306C>G synonymous_variant 0.8 rifampicin Not assoc w R - Interim
rpoC 763696 c.327T>C synonymous_variant 0.74 rifampicin Not assoc w R - Interim
rpoC 763699 c.330G>T synonymous_variant 0.73 rifampicin
rpoC 763702 c.333C>G synonymous_variant 0.72 rifampicin Not assoc w R - Interim
rpoC 763708 c.339G>C synonymous_variant 0.72 rifampicin
rpoC 763711 c.342G>C synonymous_variant 0.72 rifampicin
rpoC 763714 c.345G>C synonymous_variant 0.74 rifampicin Not assoc w R - Interim
rpoC 763717 c.348T>C synonymous_variant 0.74 rifampicin Not assoc w R - Interim
rpoC 763723 c.354G>C synonymous_variant 0.74 rifampicin
rpoC 763732 c.363C>A synonymous_variant 0.74 rifampicin
rpoC 763741 c.372C>T synonymous_variant 0.72 rifampicin
rpoC 763744 c.375G>C synonymous_variant 0.73 rifampicin
rpoC 763747 c.378G>A synonymous_variant 0.73 rifampicin
rpoC 763765 c.396T>C synonymous_variant 0.7 rifampicin
rpoC 763774 c.405G>C synonymous_variant 0.66 rifampicin
rpoC 763781 p.Ser138Ala missense_variant 0.66 rifampicin
rpoC 763792 p.Glu141Asp missense_variant 0.56 rifampicin
rpoC 763796 p.Met143Leu missense_variant 0.53 rifampicin
rpoC 763801 c.432C>T synonymous_variant 0.54 rifampicin
rpoC 763807 c.438T>C synonymous_variant 0.58 rifampicin Not assoc w R - Interim
rpoC 763816 c.447C>G synonymous_variant 0.57 rifampicin
rpoC 763831 c.462A>G synonymous_variant 0.37 rifampicin
rpoC 763836 p.Ala156Glu missense_variant 0.39 rifampicin
rpoC 763840 c.471G>C synonymous_variant 0.35 rifampicin
rpoC 763844 p.Arg159Lys missense_variant 0.35 rifampicin
rpoC 763857 p.Glu163Ala missense_variant 0.35 rifampicin
rpoC 763861 c.492C>T synonymous_variant 0.35 rifampicin
rpoC 763870 c.501C>T synonymous_variant 0.32 rifampicin
rpoC 763872 p.Gly168Ala missense_variant 0.32 rifampicin
rpoC 763876 p.Glu169Asp missense_variant 0.33 rifampicin
rpoC 763879 c.510A>G synonymous_variant 0.38 rifampicin
rpoC 763888 c.519G>T synonymous_variant 0.38 rifampicin
rpoC 763891 c.522G>C synonymous_variant 0.4 rifampicin
rpoC 763894 c.525A>G synonymous_variant 0.4 rifampicin
rpoC 763900 c.531G>C synonymous_variant 0.4 rifampicin Not assoc w R - Interim
rpoC 763915 c.546C>G synonymous_variant 0.53 rifampicin
rpoC 763933 c.564C>T synonymous_variant 0.63 rifampicin Not assoc w R - Interim
rpoC 763940 p.Ala191Ser missense_variant 0.71 rifampicin Uncertain significance
rpoC 763947 p.Ala193Val missense_variant 0.67 rifampicin Uncertain significance
rpoC 763951 c.582G>C synonymous_variant 0.67 rifampicin Not assoc w R - Interim
rpoC 763960 c.591T>G synonymous_variant 0.64 rifampicin Not assoc w R - Interim
rpoC 763969 c.600C>T synonymous_variant 0.68 rifampicin Not assoc w R - Interim
rpoC 763987 c.618C>T synonymous_variant 0.67 rifampicin
rpoC 763991 p.Ile208Leu missense_variant 0.69 rifampicin
rpoC 763996 c.627T>C synonymous_variant 0.72 rifampicin
rpoC 763999 c.630C>T synonymous_variant 0.72 rifampicin
rpoC 764002 c.633C>G synonymous_variant 0.7 rifampicin
rpoC 764003 p.Ala212Ser missense_variant 0.7 rifampicin
rpoC 764024 c.655_657delTTGinsCTC synonymous_variant 0.7 rifampicin
rpoC 764029 p.Glu220Asp missense_variant 0.69 rifampicin
rpoC 764032 p.Asp221Glu missense_variant 0.71 rifampicin
rpoC 764040 p.Ser224Thr missense_variant 0.75 rifampicin
rpoC 764044 c.675T>C synonymous_variant 0.76 rifampicin
rpoC 764054 c.685C>T synonymous_variant 0.75 rifampicin
rpoC 764059 c.690G>T synonymous_variant 0.73 rifampicin
rpoC 764083 c.714A>G synonymous_variant 0.59 rifampicin
rpoC 764084 p.Asn239Val missense_variant 0.59 rifampicin
rpoC 764095 c.726C>T synonymous_variant 0.64 rifampicin Not assoc w R - Interim
rpoC 764098 c.729A>G synonymous_variant 0.65 rifampicin Not assoc w R - Interim
rpoC 764110 c.741C>T synonymous_variant 0.69 rifampicin Not assoc w R - Interim
rpoC 764143 c.774G>C synonymous_variant 0.74 rifampicin Not assoc w R - Interim
rpoC 764147 p.Ser260Ala missense_variant 0.73 rifampicin Uncertain significance
rpoC 764150 p.Ile261Val missense_variant 0.7 rifampicin Uncertain significance
rpoC 764165 p.Glu266Gln missense_variant 0.73 rifampicin
rpoC 764176 c.807C>T synonymous_variant 0.74 rifampicin
rpoC 764177 p.Ile270Leu missense_variant 0.74 rifampicin
rpoC 764182 c.813C>T synonymous_variant 0.72 rifampicin
rpoC 764188 c.819A>G synonymous_variant 0.7 rifampicin Not assoc w R - Interim
rpoC 764195 p.Ser276Asn missense_variant 0.64 rifampicin
rpoC 764203 c.834G>C synonymous_variant 0.62 rifampicin
rpoC 764206 p.Asp279Glu missense_variant 0.64 rifampicin
rpoC 764207 p.Val280Thr missense_variant 0.64 rifampicin Uncertain significance
rpoC 764215 c.846A>C synonymous_variant 0.65 rifampicin
rpoC 764217 p.Asn283Ser missense_variant 0.63 rifampicin
rpoC 764242 c.873C>T synonymous_variant 0.69 rifampicin Not assoc w R - Interim
rpoC 764254 c.885G>C synonymous_variant 0.65 rifampicin
rpoC 764266 c.897T>G synonymous_variant 0.56 rifampicin Not assoc w R - Interim
rpoC 764311 c.942C>G synonymous_variant 0.47 rifampicin
rpoC 764317 c.948C>G synonymous_variant 0.49 rifampicin
rpoC 764320 c.951C>G synonymous_variant 0.49 rifampicin
rpoC 764332 c.963G>A synonymous_variant 0.62 rifampicin Not assoc w R - Interim
rpoC 764338 c.969G>A synonymous_variant 0.65 rifampicin Not assoc w R - Interim
rpoC 764353 c.984G>T synonymous_variant 0.69 rifampicin Not assoc w R - Interim
rpoC 764365 c.996C>T synonymous_variant 0.68 rifampicin Not assoc w R - Interim
rpoC 764371 c.1002G>C synonymous_variant 0.68 rifampicin Not assoc w R - Interim
rpoC 764377 c.1008C>G synonymous_variant 0.68 rifampicin Not assoc w R - Interim
rpoC 764380 c.1011G>C synonymous_variant 0.69 rifampicin Not assoc w R - Interim
rpoC 764387 c.1018T>C synonymous_variant 0.7 rifampicin Not assoc w R - Interim
rpoC 764405 c.1036_1038delAGGinsCGC synonymous_variant 0.71 rifampicin Not assoc w R - Interim
rpoC 764428 c.1059G>C synonymous_variant 0.74 rifampicin Not assoc w R - Interim
rpoC 764431 c.1062G>C synonymous_variant 0.74 rifampicin Not assoc w R - Interim
rpoC 764434 c.1065A>G synonymous_variant 0.75 rifampicin Not assoc w R - Interim
rpoC 764435 c.1066_1068delAGGinsCGA synonymous_variant 0.74 rifampicin
rpoC 764458 c.1089G>C synonymous_variant 0.78 rifampicin Not assoc w R - Interim
rpoC 764461 c.1092A>G synonymous_variant 0.79 rifampicin Not assoc w R - Interim
rpoC 764497 c.1128A>G synonymous_variant 0.8 rifampicin Not assoc w R - Interim
rpoC 764510 c.1141C>T synonymous_variant 0.83 rifampicin Not assoc w R - Interim
rpoC 764524 c.1155C>G synonymous_variant 0.86 rifampicin Not assoc w R - Interim
rpoC 764530 c.1161C>G synonymous_variant 0.84 rifampicin Not assoc w R - Interim
rpoC 764534 c.1165C>A synonymous_variant 0.84 rifampicin Not assoc w R - Interim
rpoC 764539 c.1170C>T synonymous_variant 0.84 rifampicin Not assoc w R - Interim
rpoC 764542 c.1173C>T synonymous_variant 0.83 rifampicin Not assoc w R - Interim
rpoC 764545 c.1176C>A synonymous_variant 0.83 rifampicin Not assoc w R - Interim
rpoC 764560 c.1191T>C synonymous_variant 0.83 rifampicin Not assoc w R - Interim
rpoC 764575 c.1206T>G synonymous_variant 0.84 rifampicin Not assoc w R - Interim
rpoC 764611 c.1242G>T synonymous_variant 0.87 rifampicin Not assoc w R - Interim
rpoC 764626 c.1257C>T synonymous_variant 0.85 rifampicin Not assoc w R - Interim
rpoC 764632 c.1263T>C synonymous_variant 0.85 rifampicin Not assoc w R - Interim
rpoC 764650 c.1281G>T synonymous_variant 0.86 rifampicin Not assoc w R - Interim
rpoC 764668 c.1299C>T synonymous_variant 0.83 rifampicin Not assoc w R - Interim
rpoC 764692 c.1323C>T synonymous_variant 0.84 rifampicin Not assoc w R - Interim
rpoC 764713 c.1344G>T synonymous_variant 0.84 rifampicin Not assoc w R - Interim
rpoC 764716 c.1347G>C synonymous_variant 0.84 rifampicin Not assoc w R - Interim
rpoC 764746 c.1377G>T synonymous_variant 0.85 rifampicin Not assoc w R - Interim
rpoC 764752 c.1383G>C synonymous_variant 0.84 rifampicin Not assoc w R - Interim
rpoC 764758 c.1389C>G synonymous_variant 0.84 rifampicin Not assoc w R - Interim
rpoC 764764 c.1395T>C synonymous_variant 0.84 rifampicin Not assoc w R - Interim
rpoC 764791 c.1422C>G synonymous_variant 0.8 rifampicin Not assoc w R - Interim
rpoC 764803 c.1434C>T synonymous_variant 0.8 rifampicin Not assoc w R - Interim
rpoC 764809 c.1440C>T synonymous_variant 0.8 rifampicin Not assoc w R
rpoC 764810 p.Pro481Ala missense_variant 0.79 rifampicin Uncertain significance
rpoC 764815 c.1446A>G synonymous_variant 0.8 rifampicin Not assoc w R - Interim
rpoC 764824 c.1455T>C synonymous_variant 0.8 rifampicin Not assoc w R - Interim
rpoC 764827 c.1458G>C synonymous_variant 0.79 rifampicin Not assoc w R - Interim
rpoC 764858 c.1489T>C synonymous_variant 0.78 rifampicin Not assoc w R - Interim
rpoC 764869 c.1500C>T synonymous_variant 0.76 rifampicin Not assoc w R - Interim
rpoC 764875 c.1506C>A synonymous_variant 0.75 rifampicin Not assoc w R - Interim
rpoC 764887 c.1518G>C synonymous_variant 0.72 rifampicin Not assoc w R - Interim
rpoC 764888 c.1519T>C synonymous_variant 0.72 rifampicin Not assoc w R - Interim
rpoC 764911 c.1542A>G synonymous_variant 0.68 rifampicin
rpoC 764912 p.Met515Gln missense_variant 0.67 rifampicin Uncertain significance
rpoC 764932 c.1563C>A synonymous_variant 0.73 rifampicin Not assoc w R - Interim
rpoC 764948 c.1579_1581delTTGinsCTC synonymous_variant 0.68 rifampicin Not assoc w R - Interim
rpoC 764968 c.1599T>C synonymous_variant 0.66 rifampicin Not assoc w R - Interim
rpoC 765004 c.1635G>C synonymous_variant 0.55 rifampicin
rpoC 765007 c.1638T>G synonymous_variant 0.53 rifampicin Not assoc w R - Interim
rpoC 765008 c.1639T>C synonymous_variant 0.54 rifampicin Not assoc w R - Interim
rpoC 765011 c.1642_1644delAGCinsTCG synonymous_variant 0.55 rifampicin
rpoC 765016 c.1647C>G synonymous_variant 0.54 rifampicin
rpoC 765019 c.1650A>G synonymous_variant 0.53 rifampicin Not assoc w R - Interim
rpoC 765040 c.1671T>C synonymous_variant 0.54 rifampicin Not assoc w R - Interim
rpoC 765041 c.1672T>C synonymous_variant 0.54 rifampicin Not assoc w R - Interim
rpoC 765047 c.1678T>C synonymous_variant 0.53 rifampicin Not assoc w R - Interim
rpoC 765055 c.1686C>G synonymous_variant 0.51 rifampicin Not assoc w R - Interim
rpoC 765073 c.1704G>C synonymous_variant 0.36 rifampicin Not assoc w R - Interim
rpoC 765076 c.1707A>G synonymous_variant 0.33 rifampicin
rpoC 765079 c.1710T>G synonymous_variant 0.3 rifampicin Not assoc w R - Interim
rpoC 765082 c.1713G>C synonymous_variant 0.31 rifampicin Not assoc w R - Interim
rpoC 765085 c.1716T>C synonymous_variant 0.33 rifampicin
rpoC 765089 c.1720T>C synonymous_variant 0.32 rifampicin Not assoc w R - Interim
rpoC 765100 c.1731G>C synonymous_variant 0.33 rifampicin
rpoC 765103 c.1734G>T synonymous_variant 0.37 rifampicin
rpoC 765283 c.1914C>G synonymous_variant 0.27 rifampicin Not assoc w R - Interim
rpoC 765288 p.Leu640Gln missense_variant 0.29 rifampicin
rpoC 765292 c.1923G>T synonymous_variant 0.42 rifampicin
rpoC 765300 p.Val644Ala missense_variant 0.41 rifampicin Uncertain significance
rpoC 765305 p.Ile646Val missense_variant 0.4 rifampicin Uncertain significance
rpoC 765319 c.1950A>G synonymous_variant 0.39 rifampicin Not assoc w R - Interim
rpoC 765323 c.1955_1957delGCC disruptive_inframe_deletion 0.39 rifampicin
rpoC 765328 p.His653Gln missense_variant 0.4 rifampicin Uncertain significance
rpoC 765330 p.Ser654Asn missense_variant 0.41 rifampicin Uncertain significance
rpoC 765334 c.1965C>T synonymous_variant 0.47 rifampicin
rpoC 765343 c.1974G>A synonymous_variant 0.56 rifampicin
rpoC 765352 c.1983G>C synonymous_variant 0.62 rifampicin Not assoc w R - Interim
rpoC 765356 p.Met663Val missense_variant 0.63 rifampicin
rpoC 765370 c.2001G>C synonymous_variant 0.7 rifampicin Not assoc w R - Interim
rpoC 765379 c.2010G>C synonymous_variant 0.73 rifampicin
rpoC 765382 c.2013G>T synonymous_variant 0.7 rifampicin Not assoc w R - Interim
rpoC 765383 p.Met672Leu missense_variant 0.72 rifampicin Uncertain significance
rpoC 765403 c.2034G>C synonymous_variant 0.74 rifampicin
rpoC 765405 p.Leu679His missense_variant 0.73 rifampicin Uncertain significance
rpoC 765409 c.2040T>G synonymous_variant 0.73 rifampicin Not assoc w R - Interim
rpoC 765421 c.2052C>G synonymous_variant 0.74 rifampicin Not assoc w R - Interim
rpoC 765449 p.Ala694Ser missense_variant 0.73 rifampicin Uncertain significance
rpoC 765454 c.2085C>G synonymous_variant 0.74 rifampicin Not assoc w R - Interim
rpoC 765469 c.2100G>C synonymous_variant 0.77 rifampicin Not assoc w R - Interim
rpoC 765478 c.2109T>G synonymous_variant 0.75 rifampicin
rpoC 765480 p.Tyr704Phe missense_variant 0.74 rifampicin Uncertain significance
rpoC 765499 c.2130C>G synonymous_variant 0.71 rifampicin Not assoc w R - Interim
rpoC 765517 c.2148C>G synonymous_variant 0.65 rifampicin Not assoc w R - Interim
rpoC 765533 p.Tyr722His missense_variant 0.59 rifampicin Uncertain significance
rpoC 765544 c.2175C>G synonymous_variant 0.5 rifampicin
rpoC 765547 c.2178C>T synonymous_variant 0.5 rifampicin Not assoc w R - Interim
rpoC 765548 c.2179_2181delAGCinsTCG synonymous_variant 0.5 rifampicin
rpoC 765553 c.2184C>T synonymous_variant 0.5 rifampicin Not assoc w R - Interim
rpoC 765556 c.2187G>C synonymous_variant 0.51 rifampicin
rpoC 765562 c.2193G>T synonymous_variant 0.51 rifampicin Not assoc w R - Interim
rpoC 765591 p.Arg741Gln missense_variant 0.42 rifampicin
rpoC 765596 p.Lys743Ala missense_variant 0.44 rifampicin
rpoC 765607 c.2238C>G synonymous_variant 0.35 rifampicin
rpoC 765826 c.2457T>C synonymous_variant 0.28 rifampicin Not assoc w R - Interim
rpoC 765835 c.2466C>T synonymous_variant 0.38 rifampicin Not assoc w R - Interim
rpoC 765841 c.2472G>T synonymous_variant 0.42 rifampicin Not assoc w R - Interim
rpoC 765861 p.Phe831Tyr missense_variant 0.54 rifampicin Uncertain significance
rpoC 765875 p.Val836Ile missense_variant 0.6 rifampicin Uncertain significance
rpoC 765907 c.2538G>T synonymous_variant 0.63 rifampicin Not assoc w R - Interim
rpoC 765910 c.2541G>C synonymous_variant 0.62 rifampicin Not assoc w R - Interim
rpoC 765928 c.2559C>G synonymous_variant 0.66 rifampicin Not assoc w R - Interim
rpoC 765940 c.2571A>T synonymous_variant 0.64 rifampicin Not assoc w R - Interim
rpoC 765947 c.2578T>C synonymous_variant 0.63 rifampicin Not assoc w R - Interim
rpoC 765962 c.2593_2595delTTGinsCTT synonymous_variant 0.6 rifampicin
rpoC 765967 c.2598C>T synonymous_variant 0.6 rifampicin Not assoc w R - Interim
rpoC 765973 c.2604C>G synonymous_variant 0.58 rifampicin
rpoC 765979 c.2610C>G synonymous_variant 0.56 rifampicin Not assoc w R - Interim
rpoC 765982 c.2613C>T synonymous_variant 0.57 rifampicin Not assoc w R - Interim
rpoC 765994 c.2625A>T synonymous_variant 0.51 rifampicin Not assoc w R - Interim
rpoC 766003 c.2634G>C synonymous_variant 0.4 rifampicin
rpoC 766009 c.2640G>C synonymous_variant 0.36 rifampicin Not assoc w R - Interim
rpoC 766012 c.2643C>G synonymous_variant 0.33 rifampicin Not assoc w R - Interim
rpoC 766021 c.2652G>C synonymous_variant 0.3 rifampicin
rpoC 766390 c.3021C>T synonymous_variant 0.27 rifampicin
rpoC 766393 c.3024C>T synonymous_variant 0.27 rifampicin Not assoc w R - Interim
rpoC 766408 c.3039C>T synonymous_variant 0.26 rifampicin Not assoc w R - Interim
rpoC 766435 p.Glu1022Asp missense_variant 0.34 rifampicin Uncertain significance
rpoC 766492 c.3123T>G synonymous_variant 0.23 rifampicin
rpoC 766501 c.3132G>C synonymous_variant 0.5 rifampicin
rpoC 766507 c.3138C>T synonymous_variant 0.55 rifampicin
rpoC 766513 c.3144C>T synonymous_variant 0.55 rifampicin Not assoc w R - Interim
rpoC 766522 c.3153C>A synonymous_variant 0.56 rifampicin
rpoC 766528 c.3159T>G synonymous_variant 0.56 rifampicin
rpoC 766531 c.3162G>C synonymous_variant 0.56 rifampicin
rpoC 766534 c.3165C>G synonymous_variant 0.57 rifampicin
rpoC 766537 c.3168G>A synonymous_variant 0.58 rifampicin
rpoC 766540 p.Asp1057Glu missense_variant 0.58 rifampicin
rpoC 766549 c.3180G>C synonymous_variant 0.6 rifampicin
rpoC 766570 c.3201T>C synonymous_variant 0.63 rifampicin
rpoC 766573 c.3204T>G synonymous_variant 0.62 rifampicin Not assoc w R - Interim
rpoC 766594 c.3225G>T synonymous_variant 0.61 rifampicin
rpoC 766607 p.Ile1080Leu missense_variant 0.59 rifampicin
rpoC 766618 c.3249G>T synonymous_variant 0.6 rifampicin
rpoC 766624 c.3255G>C synonymous_variant 0.6 rifampicin
rpoC 766630 c.3261G>C synonymous_variant 0.57 rifampicin
rpoC 766633 c.3264G>C synonymous_variant 0.57 rifampicin
rpoC 766642 c.3273C>T synonymous_variant 0.45 rifampicin
rpoC 766645 c.3276A>G synonymous_variant 0.38 rifampicin
rpoC 766651 c.3282T>C synonymous_variant 0.3 rifampicin
rpoC 766657 c.3288A>G synonymous_variant 0.25 rifampicin
rpoC 766837 c.3468G>C synonymous_variant 0.42 rifampicin Not assoc w R - Interim
rpoC 766843 c.3474T>G synonymous_variant 0.46 rifampicin Not assoc w R - Interim
rpoC 766846 c.3477C>A synonymous_variant 0.47 rifampicin Not assoc w R - Interim
rpoC 766858 c.3489C>T synonymous_variant 0.5 rifampicin Not assoc w R - Interim
rpoC 766861 c.3492G>C synonymous_variant 0.5 rifampicin Not assoc w R - Interim
rpoC 766867 c.3498C>G synonymous_variant 0.5 rifampicin Not assoc w R - Interim
rpoC 766876 c.3507C>T synonymous_variant 0.49 rifampicin Not assoc w R - Interim
rpoC 766883 p.Ser1172Ala missense_variant 0.52 rifampicin Uncertain significance
rpoC 766891 c.3522G>A synonymous_variant 0.52 rifampicin Not assoc w R - Interim
rpoC 766894 c.3525T>C synonymous_variant 0.51 rifampicin
rpoC 766895 c.3526T>C synonymous_variant 0.52 rifampicin
rpoC 766900 c.3531T>C synonymous_variant 0.49 rifampicin
rpoC 766909 c.3540G>C synonymous_variant 0.51 rifampicin
rpoC 766911 p.Ile1181Thr missense_variant 0.5 rifampicin
rpoC 766915 p.Asp1182Glu missense_variant 0.5 rifampicin
rpoC 766918 c.3549C>T synonymous_variant 0.52 rifampicin Not assoc w R - Interim
rpoC 766921 c.3552G>C synonymous_variant 0.53 rifampicin
rpoC 766931 p.Ala1188Ser missense_variant 0.6 rifampicin Uncertain significance
rpoC 766942 c.3573C>T synonymous_variant 0.63 rifampicin Not assoc w R - Interim
rpoC 766945 c.3576A>C synonymous_variant 0.63 rifampicin Not assoc w R - Interim
rpoC 766963 c.3594T>C synonymous_variant 0.67 rifampicin Not assoc w R - Interim
rpoC 766996 c.3627C>T synonymous_variant 0.69 rifampicin Not assoc w R - Interim
rpoC 767002 c.3633G>C synonymous_variant 0.68 rifampicin Not assoc w R - Interim
rpoC 767008 c.3639G>A synonymous_variant 0.7 rifampicin Not assoc w R - Interim
rpoC 767023 c.3654C>T synonymous_variant 0.72 rifampicin Not assoc w R - Interim
rpoC 767044 c.3675G>C synonymous_variant 0.75 rifampicin Not assoc w R - Interim
rpoC 767080 c.3711G>C synonymous_variant 0.8 rifampicin Not assoc w R - Interim
rpoC 767098 c.3729T>C synonymous_variant 0.82 rifampicin Not assoc w R - Interim
rpoC 767104 c.3735C>G synonymous_variant 0.82 rifampicin Not assoc w R - Interim
rpoC 767107 c.3738C>T synonymous_variant 0.8 rifampicin Not assoc w R - Interim
rpoC 767119 c.3750A>G synonymous_variant 0.82 rifampicin Not assoc w R - Interim
rpoC 767125 c.3756G>C synonymous_variant 0.81 rifampicin Not assoc w R - Interim
rpoC 767134 c.3765C>T synonymous_variant 0.8 rifampicin Not assoc w R - Interim
rpoC 767138 c.3769C>T synonymous_variant 0.78 rifampicin Not assoc w R - Interim
rpoC 767149 c.3780C>T synonymous_variant 0.78 rifampicin Not assoc w R - Interim
rpoC 767158 c.3789T>C synonymous_variant 0.78 rifampicin Not assoc w R - Interim
rpoC 767179 c.3810C>T synonymous_variant 0.75 rifampicin
rpoC 767180 p.Ala1271Ser missense_variant 0.75 rifampicin Uncertain significance
rpoC 767191 c.3822C>G synonymous_variant 0.74 rifampicin Not assoc w R - Interim
rpoC 767197 c.3828G>A synonymous_variant 0.72 rifampicin Not assoc w R - Interim
rpoC 767203 c.3834C>G synonymous_variant 0.71 rifampicin
rpoC 767206 c.3837C>G synonymous_variant 0.71 rifampicin Not assoc w R - Interim
rpoC 767209 c.3840T>C synonymous_variant 0.71 rifampicin Not assoc w R - Interim
rpoC 767212 c.3843G>C synonymous_variant 0.7 rifampicin
rpoC 767221 c.3852C>G synonymous_variant 0.73 rifampicin Not assoc w R - Interim
rpoC 767230 c.3861G>C synonymous_variant 0.68 rifampicin Not assoc w R - Interim
rpoC 767233 c.3864T>C synonymous_variant 0.69 rifampicin Not assoc w R - Interim
rpoC 767254 c.3885G>C synonymous_variant 0.59 rifampicin Not assoc w R - Interim
rpoC 767264 p.Ala1299Ser missense_variant 0.54 rifampicin Uncertain significance
rpoC 767267 p.Ala1300Asn missense_variant 0.53 rifampicin Uncertain significance
rpoC 767281 c.3912C>G synonymous_variant 0.54 rifampicin Not assoc w R - Interim
rpoC 767284 c.3915C>G synonymous_variant 0.54 rifampicin Not assoc w R - Interim
mmpL5 775639 p.Ile948Val missense_variant 1.0 bedaquiline Not assoc w R - Interim
clofazimine Not assoc w R
rpsL 781395 c.-165T>C upstream_gene_variant 1.0 streptomycin Not assoc w R
rpsL 781559 c.-1G>C upstream_gene_variant 0.43 streptomycin
rpsL 781572 p.Gln5Asn missense_variant 0.51 streptomycin
rpsL 781586 c.27C>T synonymous_variant 0.55 streptomycin
rpsL 781595 c.36T>C synonymous_variant 0.61 streptomycin
rpsL 781608 p.Ser17Ala missense_variant 0.6 streptomycin
rpsL 781616 c.57C>G synonymous_variant 0.6 streptomycin
rpsL 781628 c.69T>C synonymous_variant 0.64 streptomycin Not assoc w R - Interim
rpsL 781649 c.90T>C synonymous_variant 0.58 streptomycin
rpsL 781655 c.96T>C synonymous_variant 0.62 streptomycin
rpsL 781658 c.99A>C synonymous_variant 0.62 streptomycin Not assoc w R - Interim
rpsL 781670 c.111G>C synonymous_variant 0.72 streptomycin
rpsL 781706 c.147T>C synonymous_variant 0.79 streptomycin
rpsL 781715 c.156T>G synonymous_variant 0.71 streptomycin
rpsL 781721 c.162C>T synonymous_variant 0.69 streptomycin
rpsL 781725 p.Lys56Arg missense_variant 0.7 streptomycin
rpsL 781728 c.169T>C synonymous_variant 0.71 streptomycin
rpsL 781733 c.174G>C synonymous_variant 0.71 streptomycin
rpsL 781736 c.177T>C synonymous_variant 0.71 streptomycin
rpsL 781737 p.Gln60Ala missense_variant 0.71 streptomycin
rpsL 781742 c.183C>G synonymous_variant 0.7 streptomycin
rpsL 781751 c.192G>C synonymous_variant 0.74 streptomycin
rpsL 781754 c.195G>T synonymous_variant 0.74 streptomycin
rpsL 781760 c.201T>C synonymous_variant 0.78 streptomycin
rpsL 781763 c.204C>G synonymous_variant 0.75 streptomycin
rpsL 781766 c.207C>T synonymous_variant 0.75 streptomycin Not assoc w R - Interim
rpsL 781772 c.213C>T synonymous_variant 0.77 streptomycin Not assoc w R - Interim
rpsL 781802 c.243G>C synonymous_variant 0.85 streptomycin
rpsL 781814 c.255C>T synonymous_variant 0.84 streptomycin
rpsL 781817 c.258G>T synonymous_variant 0.84 streptomycin
rpsL 781829 c.270G>C synonymous_variant 0.79 streptomycin
rpsL 781832 c.273T>C synonymous_variant 0.77 streptomycin
rpsL 781859 c.300T>C synonymous_variant 0.82 streptomycin Not assoc w R - Interim
rpsL 781868 c.309T>C synonymous_variant 0.84 streptomycin
rpsL 781871 c.312G>C synonymous_variant 0.84 streptomycin
rpsL 781877 c.318T>A synonymous_variant 0.81 streptomycin
rpsL 781892 c.333A>G synonymous_variant 0.8 streptomycin
rpsL 781898 c.339A>T synonymous_variant 0.8 streptomycin
rpsL 781907 c.348T>C synonymous_variant 0.79 streptomycin
rpsL 781916 c.357T>C synonymous_variant 0.76 streptomycin
rpsL 781929 p.Gly124Ser missense_variant 0.72 streptomycin Uncertain significance
rpsL 781933 c.374G>A splice_region_variant&stop_retained_variant 0.72 streptomycin
rplC 800612 c.-197A>G upstream_gene_variant 0.33 linezolid
rplC 800618 c.-191T>G upstream_gene_variant 0.36 linezolid
rplC 800621 c.-188G>A upstream_gene_variant 0.42 linezolid
rplC 800633 c.-176T>C upstream_gene_variant 0.56 linezolid
rplC 800639 c.-170C>T upstream_gene_variant 0.6 linezolid
rplC 800645 c.-164C>G upstream_gene_variant 0.64 linezolid
rplC 800648 c.-161A>G upstream_gene_variant 0.67 linezolid
rplC 800654 c.-155T>C upstream_gene_variant 0.67 linezolid
rplC 800672 c.-137G>C upstream_gene_variant 0.65 linezolid
rplC 800690 c.-119C>T upstream_gene_variant 0.71 linezolid
rplC 800693 c.-116A>C upstream_gene_variant 0.71 linezolid
rplC 800703 c.-106_-104delTTGinsCTC upstream_gene_variant 0.68 linezolid
rplC 800715 c.-94A>C upstream_gene_variant 0.7 linezolid
rplC 800720 c.-89T>C upstream_gene_variant 0.71 linezolid
rplC 800723 c.-86C>G upstream_gene_variant 0.73 linezolid
rplC 800735 c.-74C>G upstream_gene_variant 0.71 linezolid
rplC 800762 c.-47T>G upstream_gene_variant 0.7 linezolid
rplC 800780 c.-29C>G upstream_gene_variant 0.6 linezolid
rplC 800832 c.24T>C synonymous_variant 0.51 linezolid
rplC 800856 c.48A>G synonymous_variant 0.55 linezolid
rplC 800865 p.Glu19Asp missense_variant 0.46 linezolid
rplC 800867 p.Ser20Asn missense_variant 0.46 linezolid
rplC 800872 c.64_66delAGAinsCGG synonymous_variant 0.44 linezolid
rplC 800877 c.69A>T synonymous_variant 0.44 linezolid
rplC 800880 c.72A>C synonymous_variant 0.44 linezolid
rplC 800886 c.78G>A synonymous_variant 0.46 linezolid
rplC 800892 c.84G>C synonymous_variant 0.47 linezolid
rplC 800904 c.96G>C synonymous_variant 0.47 linezolid
rplC 800910 c.102C>T synonymous_variant 0.47 linezolid
rplC 800916 c.108A>G synonymous_variant 0.47 linezolid
rplC 800928 c.120C>G synonymous_variant 0.41 linezolid
rplC 800931 c.123G>C synonymous_variant 0.4 linezolid
rplC 800932 p.Pro42Thr missense_variant 0.4 linezolid
rplC 800937 c.129A>G synonymous_variant 0.4 linezolid
rplC 800939 p.Arg44Gln missense_variant 0.4 linezolid
rplC 800946 c.138T>C synonymous_variant 0.38 linezolid
rplC 800949 c.141T>C synonymous_variant 0.36 linezolid
rplC 800964 c.156G>C synonymous_variant 0.36 linezolid
rplC 800967 c.159C>G synonymous_variant 0.39 linezolid
Rv1129c 1254776 c.-242G>A upstream_gene_variant 1.0 levofloxacin
moxifloxacin
isoniazid
rifampicin
fbiC 1303686 c.756C>G synonymous_variant 0.35 pretomanid
delamanid
clofazimine
fbiC 1303689 c.759T>C synonymous_variant 0.36 pretomanid
delamanid
clofazimine
fbiC 1303695 c.765T>C synonymous_variant 0.36 pretomanid
delamanid
clofazimine
fbiC 1303701 c.771C>G synonymous_variant 0.33 pretomanid
delamanid
clofazimine
fbiC 1303704 c.774T>C synonymous_variant 0.32 pretomanid
delamanid
clofazimine
fbiC 1303713 c.783C>G synonymous_variant 0.33 pretomanid
delamanid
clofazimine
fbiC 1303727 p.Thr266Asn missense_variant 0.32 pretomanid
delamanid
clofazimine
fbiC 1303731 c.801A>G synonymous_variant 0.32 pretomanid
delamanid
clofazimine
fbiC 1303732 p.Ser268Thr missense_variant 0.32 pretomanid
delamanid
clofazimine
fbiC 1303746 p.Asp272Glu missense_variant 0.31 pretomanid
delamanid
clofazimine
fbiC 1303750 p.Leu274Ile missense_variant 0.3 pretomanid
delamanid
clofazimine
fbiC 1303761 c.831T>C synonymous_variant 0.27 pretomanid
delamanid
clofazimine
fbiC 1303768 p.Ser280Val missense_variant 0.27 pretomanid
delamanid
clofazimine
fbiC 1303779 c.849G>A synonymous_variant 0.26 pretomanid
delamanid
clofazimine
fbiC 1303785 c.855G>C synonymous_variant 0.21 pretomanid
delamanid
clofazimine
fbiC 1303788 c.858T>C synonymous_variant 0.21 pretomanid
delamanid
clofazimine
fbiC 1303789 p.Ile287Val missense_variant 0.21 pretomanid
delamanid
clofazimine
sigE 1364631 c.219C>T synonymous_variant 0.26 pyrazinamide
sigE 1364637 c.225C>T synonymous_variant 0.26 pyrazinamide Not assoc w R - Interim
sigE 1364640 c.228G>A synonymous_variant 0.31 pyrazinamide
sigE 1364644 p.Lys78Gln missense_variant 0.33 pyrazinamide
sigE 1364650 p.Thr80Ala missense_variant 0.43 pyrazinamide Uncertain significance
sigE 1364670 c.258G>A synonymous_variant 0.42 pyrazinamide
sigE 1364676 c.264C>T synonymous_variant 0.41 pyrazinamide
sigE 1364680 p.Gln90Glu missense_variant 0.41 pyrazinamide
sigE 1364685 c.273C>T synonymous_variant 0.44 pyrazinamide
sigE 1364691 c.279T>C synonymous_variant 0.44 pyrazinamide
sigE 1364694 c.282G>C synonymous_variant 0.44 pyrazinamide
sigE 1364703 c.291G>C synonymous_variant 0.51 pyrazinamide
sigE 1364709 c.297T>G synonymous_variant 0.52 pyrazinamide
sigE 1364712 c.300T>C synonymous_variant 0.52 pyrazinamide
sigE 1364718 c.306C>T synonymous_variant 0.53 pyrazinamide
sigE 1364726 p.Asn105Ser missense_variant 0.51 pyrazinamide
sigE 1364733 p.His107Gln missense_variant 0.51 pyrazinamide
sigE 1364742 c.330A>G synonymous_variant 0.5 pyrazinamide
sigE 1364751 c.339C>A synonymous_variant 0.51 pyrazinamide
sigE 1364757 c.345G>A synonymous_variant 0.51 pyrazinamide
sigE 1364763 c.351T>C synonymous_variant 0.52 pyrazinamide
sigE 1364778 c.366G>C synonymous_variant 0.5 pyrazinamide
sigE 1364782 p.Val124Leu missense_variant 0.51 pyrazinamide
sigE 1364790 c.378T>C synonymous_variant 0.5 pyrazinamide
sigE 1364799 c.387G>C synonymous_variant 0.41 pyrazinamide
sigE 1364811 c.399A>G synonymous_variant 0.36 pyrazinamide
sigE 1364814 c.402C>T synonymous_variant 0.36 pyrazinamide
sigE 1364820 c.408A>G synonymous_variant 0.38 pyrazinamide
sigE 1364839 c.427T>C synonymous_variant 0.28 pyrazinamide
atpE 1461087 c.43C>T synonymous_variant 0.29 bedaquiline
atpE 1461101 c.57T>A synonymous_variant 0.49 bedaquiline
atpE 1461113 c.69C>T synonymous_variant 0.59 bedaquiline
atpE 1461132 p.Val30Ile missense_variant 0.71 bedaquiline
atpE 1461146 c.102G>T synonymous_variant 0.72 bedaquiline
atpE 1461149 c.105T>G synonymous_variant 0.72 bedaquiline
atpE 1461161 c.117C>G synonymous_variant 0.73 bedaquiline
atpE 1461164 c.120C>T synonymous_variant 0.73 bedaquiline
atpE 1461167 c.123G>T synonymous_variant 0.75 bedaquiline
atpE 1461170 c.126A>G synonymous_variant 0.73 bedaquiline
atpE 1461179 c.135G>T synonymous_variant 0.73 bedaquiline
atpE 1461182 c.138A>G synonymous_variant 0.76 bedaquiline
atpE 1461185 c.141G>C synonymous_variant 0.75 bedaquiline
atpE 1461197 c.153A>C synonymous_variant 0.73 bedaquiline
atpE 1461219 c.175T>C synonymous_variant 0.72 bedaquiline
atpE 1461230 c.186G>T synonymous_variant 0.7 bedaquiline
atpE 1461233 c.189A>G synonymous_variant 0.69 bedaquiline
atpE 1461251 c.207G>C synonymous_variant 0.57 bedaquiline
atpE 1461254 c.210T>C synonymous_variant 0.52 bedaquiline
atpE 1461261 c.217C>T synonymous_variant 0.5 bedaquiline
atpE 1461275 c.231T>G synonymous_variant 0.27 bedaquiline
rrs 1471659 n.-187C>T upstream_gene_variant 1.0 kanamycin
capreomycin
streptomycin
amikacin
rrs 1471922 n.78delT non_coding_transcript_exon_variant 0.65 kanamycin
capreomycin
streptomycin
amikacin
rrs 1471925 n.80T>C non_coding_transcript_exon_variant 0.65 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin
amikacin Uncertain significance
rrs 1471931 n.87delA non_coding_transcript_exon_variant 0.65 kanamycin
capreomycin
streptomycin
amikacin
rrs 1471934 n.89A>G non_coding_transcript_exon_variant 0.66 kanamycin
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1471985 n.140T>C non_coding_transcript_exon_variant 0.78 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1471986 n.141C>T non_coding_transcript_exon_variant 0.79 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472030 n.185G>A non_coding_transcript_exon_variant 0.69 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin
amikacin Uncertain significance
rrs 1472031 n.186G>C non_coding_transcript_exon_variant 0.69 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin
amikacin Uncertain significance
rrs 1472032 n.187G>A non_coding_transcript_exon_variant 0.69 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472033 n.188A>C non_coding_transcript_exon_variant 0.7 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin
amikacin Uncertain significance
rrs 1472035 n.190G>T non_coding_transcript_exon_variant 0.69 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin
amikacin Uncertain significance
rrs 1472040 n.195T>G non_coding_transcript_exon_variant 0.69 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin
amikacin Uncertain significance
rrs 1472041 n.196C>T non_coding_transcript_exon_variant 0.69 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472042 n.197T>G non_coding_transcript_exon_variant 0.7 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin
amikacin Uncertain significance
rrs 1472043 n.198T>A non_coding_transcript_exon_variant 0.7 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin
amikacin Uncertain significance
rrs 1472050 n.205G>C non_coding_transcript_exon_variant 0.72 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin
amikacin Uncertain significance
rrs 1472053 n.211_212delGC non_coding_transcript_exon_variant 0.72 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin
amikacin Uncertain significance
rrs 1472061 n.216A>T non_coding_transcript_exon_variant 0.74 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin
amikacin Uncertain significance
rrs 1472106 n.261G>A non_coding_transcript_exon_variant 0.73 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Not assoc w R
rrs 1472108 n.263C>T non_coding_transcript_exon_variant 0.71 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472113 n.268T>C non_coding_transcript_exon_variant 0.72 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472150 n.305T>A non_coding_transcript_exon_variant 0.71 kanamycin Uncertain significance
capreomycin Not assoc w R
streptomycin Uncertain significance
amikacin Not assoc w R
rrs 1472251 n.406G>A non_coding_transcript_exon_variant 0.68 kanamycin Uncertain significance
capreomycin Not assoc w R
streptomycin Uncertain significance
amikacin Not assoc w R
rrs 1472286 n.441C>G non_coding_transcript_exon_variant 0.5 kanamycin
capreomycin
streptomycin
amikacin
rrs 1472287 n.442C>T non_coding_transcript_exon_variant 0.5 kanamycin
capreomycin
streptomycin
amikacin
rrs 1472289 n.444T>G non_coding_transcript_exon_variant 0.5 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472290 n.445C>G non_coding_transcript_exon_variant 0.5 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472297 n.453_465delGTCCGGGTTCTCT non_coding_transcript_exon_variant 0.48 kanamycin
capreomycin
streptomycin
amikacin
rrs 1472313 n.468delGinsAA non_coding_transcript_exon_variant 0.47 kanamycin
capreomycin
streptomycin
amikacin
rrs 1472315 n.470T>G non_coding_transcript_exon_variant 0.47 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin
amikacin Uncertain significance
rrs 1472324 n.479G>C non_coding_transcript_exon_variant 0.45 kanamycin
capreomycin
streptomycin Uncertain significance
amikacin
rrs 1472325 n.480G>C non_coding_transcript_exon_variant 0.45 kanamycin
capreomycin
streptomycin Uncertain significance
amikacin
rrs 1472327 n.482G>A non_coding_transcript_exon_variant 0.47 kanamycin
capreomycin
streptomycin
amikacin
rrs 1472328 n.483G>C non_coding_transcript_exon_variant 0.47 kanamycin
capreomycin
streptomycin Uncertain significance
amikacin
rrs 1472337 n.492C>G non_coding_transcript_exon_variant 0.62 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin
amikacin Uncertain significance
rrs 1472380 n.535G>C non_coding_transcript_exon_variant 0.74 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472446 n.601T>A non_coding_transcript_exon_variant 0.81 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin
amikacin Uncertain significance
rrs 1472452 n.607G>A non_coding_transcript_exon_variant 0.81 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin
amikacin Uncertain significance
rrs 1472464 n.619A>G non_coding_transcript_exon_variant 0.83 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472612 n.767G>T non_coding_transcript_exon_variant 0.83 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472734 n.889C>T non_coding_transcript_exon_variant 0.83 kanamycin Uncertain significance
capreomycin Not assoc w R
streptomycin Uncertain significance
amikacin Not assoc w R
rrs 1472741 n.896G>A non_coding_transcript_exon_variant 0.82 kanamycin Uncertain significance
capreomycin Not assoc w R
streptomycin Uncertain significance
amikacin Not assoc w R
rrs 1472846 n.1001C>T non_coding_transcript_exon_variant 0.81 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin
amikacin Uncertain significance
rrs 1472847 n.1002G>A non_coding_transcript_exon_variant 0.82 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin
amikacin Uncertain significance
rrs 1472848 n.1003T>C non_coding_transcript_exon_variant 0.82 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472860 n.1015C>T non_coding_transcript_exon_variant 0.82 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin
amikacin Uncertain significance
rrs 1472861 n.1016G>A non_coding_transcript_exon_variant 0.82 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin
amikacin Uncertain significance
rrs 1472956 n.1111T>C non_coding_transcript_exon_variant 0.84 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472957 n.1112C>T non_coding_transcript_exon_variant 0.83 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472969 n.1124A>G non_coding_transcript_exon_variant 0.8 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472970 n.1125C>G non_coding_transcript_exon_variant 0.81 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin
amikacin Uncertain significance
rrs 1472977 n.1132G>C non_coding_transcript_exon_variant 0.8 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin
amikacin Uncertain significance
rrs 1472978 n.1133T>C non_coding_transcript_exon_variant 0.8 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472989 n.1144G>A non_coding_transcript_exon_variant 0.78 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1472990 n.1145A>G non_coding_transcript_exon_variant 0.78 kanamycin Not assoc w R
capreomycin Not assoc w R
streptomycin Uncertain significance
amikacin Not assoc w R
rrs 1473082 n.1237G>A non_coding_transcript_exon_variant 0.81 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1473088 n.1243A>G non_coding_transcript_exon_variant 0.8 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1473099 n.1254T>A non_coding_transcript_exon_variant 0.76 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1473104 n.1259C>T non_coding_transcript_exon_variant 0.76 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1473105 n.1260G>A non_coding_transcript_exon_variant 0.76 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin
amikacin Uncertain significance
rrs 1473110 n.1265T>G non_coding_transcript_exon_variant 0.75 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1473111 n.1266A>G non_coding_transcript_exon_variant 0.75 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1473121 n.1276T>C non_coding_transcript_exon_variant 0.77 kanamycin Uncertain significance
capreomycin Not assoc w R
streptomycin Uncertain significance
amikacin Not assoc w R
rrs 1473123 n.1278A>T non_coding_transcript_exon_variant 0.78 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1473129 n.1284C>T non_coding_transcript_exon_variant 0.8 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1473145 n.1300C>T non_coding_transcript_exon_variant 0.8 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1473166 n.1321G>A non_coding_transcript_exon_variant 0.8 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin Uncertain significance
amikacin Uncertain significance
rrs 1473288 n.1443C>T non_coding_transcript_exon_variant 0.75 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin
amikacin Uncertain significance
rrs 1473290 n.1445C>T non_coding_transcript_exon_variant 0.74 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin
amikacin Uncertain significance
rrs 1473291 n.1446G>T non_coding_transcript_exon_variant 0.74 kanamycin Uncertain significance
capreomycin Uncertain significance
streptomycin
amikacin Uncertain significance
rrl 1473684 n.27G>A non_coding_transcript_exon_variant 0.49 capreomycin
linezolid
rrl 1473696 n.39_40delTCinsCTA non_coding_transcript_exon_variant 0.53 capreomycin
linezolid
rrl 1473699 n.43delG non_coding_transcript_exon_variant 0.51 capreomycin
linezolid
rrl 1473707 n.50T>A non_coding_transcript_exon_variant 0.62 capreomycin Uncertain significance
linezolid
rrl 1473717 n.60G>A non_coding_transcript_exon_variant 0.65 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1473731 n.74T>A non_coding_transcript_exon_variant 0.71 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1473746 n.89T>C non_coding_transcript_exon_variant 0.76 capreomycin Uncertain significance
linezolid
rrl 1473756 n.99G>T non_coding_transcript_exon_variant 0.78 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1473758 n.101G>T non_coding_transcript_exon_variant 0.77 capreomycin Uncertain significance
linezolid
rrl 1473770 n.113T>C non_coding_transcript_exon_variant 0.79 capreomycin Uncertain significance
linezolid
rrl 1473806 n.149C>T non_coding_transcript_exon_variant 0.86 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1473812 n.155G>A non_coding_transcript_exon_variant 0.83 capreomycin Uncertain significance
linezolid
rrl 1473814 n.157A>T non_coding_transcript_exon_variant 0.81 capreomycin Uncertain significance
linezolid
rrl 1473815 n.158T>G non_coding_transcript_exon_variant 0.81 capreomycin Uncertain significance
linezolid
rrl 1473829 n.172G>C non_coding_transcript_exon_variant 0.82 capreomycin Uncertain significance
linezolid
rrl 1473831 n.174G>T non_coding_transcript_exon_variant 0.81 capreomycin Uncertain significance
linezolid
rrl 1473832 n.175C>T non_coding_transcript_exon_variant 0.81 capreomycin Uncertain significance
linezolid
rrl 1473839 n.182G>A non_coding_transcript_exon_variant 0.83 capreomycin Uncertain significance
linezolid
rrl 1473876 n.219G>A non_coding_transcript_exon_variant 0.76 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1473887 n.230T>C non_coding_transcript_exon_variant 0.74 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1473888 n.231T>C non_coding_transcript_exon_variant 0.73 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1473898 n.241C>T non_coding_transcript_exon_variant 0.67 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1473899 n.242A>G non_coding_transcript_exon_variant 0.66 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1473916 n.259C>A non_coding_transcript_exon_variant 0.62 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1473923 n.266C>G non_coding_transcript_exon_variant 0.55 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1473924 n.267_268insT non_coding_transcript_exon_variant 0.52 capreomycin
linezolid
rrl 1473937 n.280C>T non_coding_transcript_exon_variant 0.43 capreomycin Uncertain significance
linezolid
rrl 1473943 n.286G>T non_coding_transcript_exon_variant 0.37 capreomycin Uncertain significance
linezolid
rrl 1473945 n.288T>A non_coding_transcript_exon_variant 0.33 capreomycin Uncertain significance
linezolid
rrl 1473946 n.289A>T non_coding_transcript_exon_variant 0.32 capreomycin Uncertain significance
linezolid
rrl 1473950 n.293G>T non_coding_transcript_exon_variant 0.31 capreomycin Uncertain significance
linezolid
rrl 1474030 n.373G>A non_coding_transcript_exon_variant 0.39 capreomycin
linezolid
rrl 1474044 n.387C>T non_coding_transcript_exon_variant 0.51 capreomycin Uncertain significance
linezolid
rrl 1474051 n.394T>C non_coding_transcript_exon_variant 0.53 capreomycin
linezolid
rrl 1474054 n.397T>C non_coding_transcript_exon_variant 0.53 capreomycin Uncertain significance
linezolid
rrl 1474056 n.399T>C non_coding_transcript_exon_variant 0.55 capreomycin
linezolid
rrl 1474061 n.404T>C non_coding_transcript_exon_variant 0.6 capreomycin
linezolid
rrl 1474074 n.417C>T non_coding_transcript_exon_variant 0.64 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474089 n.432C>T non_coding_transcript_exon_variant 0.68 capreomycin Uncertain significance
linezolid
rrl 1474093 n.436G>A non_coding_transcript_exon_variant 0.67 capreomycin Uncertain significance
linezolid
rrl 1474100 n.443C>T non_coding_transcript_exon_variant 0.67 capreomycin
linezolid
rrl 1474103 n.446A>C non_coding_transcript_exon_variant 0.65 capreomycin
linezolid
rrl 1474106 n.449_450insCT non_coding_transcript_exon_variant 0.61 capreomycin
linezolid
rrl 1474109 n.453_454delAT non_coding_transcript_exon_variant 0.62 capreomycin
linezolid
rrl 1474130 n.473C>T non_coding_transcript_exon_variant 0.7 capreomycin Uncertain significance
linezolid
rrl 1474140 n.483C>T non_coding_transcript_exon_variant 0.72 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474151 n.494C>T non_coding_transcript_exon_variant 0.73 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474181 n.524_525insT non_coding_transcript_exon_variant 0.72 capreomycin
linezolid
rrl 1474184 n.527C>A non_coding_transcript_exon_variant 0.73 capreomycin
linezolid
rrl 1474185 n.529delA non_coding_transcript_exon_variant 0.73 capreomycin
linezolid
rrl 1474249 n.592G>T non_coding_transcript_exon_variant 0.74 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474263 n.606G>A non_coding_transcript_exon_variant 0.75 capreomycin Uncertain significance
linezolid
rrl 1474282 n.625G>A non_coding_transcript_exon_variant 0.7 capreomycin Uncertain significance
linezolid
rrl 1474291 n.634_649delTTTCCTCTCCGGAGGAinsC non_coding_transcript_exon_variant 0.67 capreomycin
linezolid
rrl 1474308 n.651G>T non_coding_transcript_exon_variant 0.65 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474310 n.653T>G non_coding_transcript_exon_variant 0.65 capreomycin
linezolid
rrl 1474356 n.699T>C non_coding_transcript_exon_variant 0.75 capreomycin Uncertain significance
linezolid
rrl 1474362 n.705A>G non_coding_transcript_exon_variant 0.73 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474387 n.730C>T non_coding_transcript_exon_variant 0.74 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474413 n.756A>C non_coding_transcript_exon_variant 0.71 capreomycin
linezolid
rrl 1474415 n.759_781delCACACGCGCATACGCGCGTGTGA non_coding_transcript_exon_variant 0.76 capreomycin
linezolid
rrl 1474496 n.839C>G non_coding_transcript_exon_variant 0.76 capreomycin Uncertain significance
linezolid
rrl 1474497 n.840G>C non_coding_transcript_exon_variant 0.75 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474506 n.849C>G non_coding_transcript_exon_variant 0.75 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474507 n.850G>C non_coding_transcript_exon_variant 0.75 capreomycin Uncertain significance
linezolid
rrl 1474626 n.969T>C non_coding_transcript_exon_variant 0.77 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474632 n.975G>T non_coding_transcript_exon_variant 0.75 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474636 n.979A>T non_coding_transcript_exon_variant 0.74 capreomycin Uncertain significance
linezolid
rrl 1474637 n.980C>T non_coding_transcript_exon_variant 0.74 capreomycin Uncertain significance
linezolid
rrl 1474638 n.981C>G non_coding_transcript_exon_variant 0.73 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474639 n.982G>T non_coding_transcript_exon_variant 0.74 capreomycin Uncertain significance
linezolid
rrl 1474640 n.983C>T non_coding_transcript_exon_variant 0.74 capreomycin Uncertain significance
linezolid
rrl 1474709 n.1052_1057delGTGGTGinsAATAAGT non_coding_transcript_exon_variant 0.75 capreomycin
linezolid
rrl 1474717 n.1060A>G non_coding_transcript_exon_variant 0.75 capreomycin Uncertain significance
linezolid
rrl 1474722 n.1065T>C non_coding_transcript_exon_variant 0.75 capreomycin Uncertain significance
linezolid
rrl 1474743 n.1086T>G non_coding_transcript_exon_variant 0.78 capreomycin Uncertain significance
linezolid
rrl 1474760 n.1103A>G non_coding_transcript_exon_variant 0.77 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474794 n.1137C>T non_coding_transcript_exon_variant 0.83 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474803 n.1146G>A non_coding_transcript_exon_variant 0.83 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474812 n.1155G>A non_coding_transcript_exon_variant 0.83 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474830 n.1173A>G non_coding_transcript_exon_variant 0.81 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474913 n.1256T>C non_coding_transcript_exon_variant 0.64 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1474932 n.1275C>T non_coding_transcript_exon_variant 0.52 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475031 n.1374G>C non_coding_transcript_exon_variant 0.36 capreomycin Uncertain significance
linezolid
rrl 1475061 n.1406delA non_coding_transcript_exon_variant 0.68 capreomycin Uncertain significance
linezolid
rrl 1475076 n.1419C>A non_coding_transcript_exon_variant 0.79 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475090 n.1433A>T non_coding_transcript_exon_variant 0.8 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475114 n.1457C>T non_coding_transcript_exon_variant 0.81 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475120 n.1463G>T non_coding_transcript_exon_variant 0.82 capreomycin Uncertain significance
linezolid
rrl 1475129 n.1472G>A non_coding_transcript_exon_variant 0.82 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475202 n.1545G>C non_coding_transcript_exon_variant 0.67 capreomycin Uncertain significance
linezolid
rrl 1475209 n.1552G>A non_coding_transcript_exon_variant 0.62 capreomycin Uncertain significance
linezolid
rrl 1475213 n.1556C>T non_coding_transcript_exon_variant 0.57 capreomycin Uncertain significance
linezolid
rrl 1475220 n.1563G>T non_coding_transcript_exon_variant 0.5 capreomycin Uncertain significance
linezolid
rrl 1475429 n.1772G>A non_coding_transcript_exon_variant 0.48 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475443 n.1786G>A non_coding_transcript_exon_variant 0.59 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475452 n.1795C>A non_coding_transcript_exon_variant 0.61 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475475 n.1818C>T non_coding_transcript_exon_variant 0.65 capreomycin Uncertain significance
linezolid
rrl 1475479 n.1822C>T non_coding_transcript_exon_variant 0.63 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475480 n.1823A>T non_coding_transcript_exon_variant 0.65 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475505 n.1848G>A non_coding_transcript_exon_variant 0.66 capreomycin Uncertain significance
linezolid
rrl 1475526 n.1869C>A non_coding_transcript_exon_variant 0.65 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475531 n.1874C>T non_coding_transcript_exon_variant 0.67 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475573 n.1916G>A non_coding_transcript_exon_variant 0.5 capreomycin Uncertain significance
linezolid
rrl 1475649 n.1992A>G non_coding_transcript_exon_variant 0.34 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475659 n.2002G>A non_coding_transcript_exon_variant 0.49 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475760 n.2105_2106delGC non_coding_transcript_exon_variant 0.74 capreomycin
linezolid
rrl 1475764 n.2107A>T non_coding_transcript_exon_variant 0.73 capreomycin
linezolid
rrl 1475765 n.2108A>T non_coding_transcript_exon_variant 0.73 capreomycin
linezolid
rrl 1475975 n.2318C>T non_coding_transcript_exon_variant 0.72 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475977 n.2320A>G non_coding_transcript_exon_variant 0.71 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475988 n.2331A>G non_coding_transcript_exon_variant 0.67 capreomycin Not assoc w R
linezolid Uncertain significance
rrl 1475989 n.2332T>C non_coding_transcript_exon_variant 0.67 capreomycin Uncertain significance
linezolid
rrl 1475993 n.2336C>T non_coding_transcript_exon_variant 0.67 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1475997 n.2340A>T non_coding_transcript_exon_variant 0.71 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476030 n.2373A>G non_coding_transcript_exon_variant 0.42 capreomycin Uncertain significance
linezolid
rrl 1476085 n.2428G>A non_coding_transcript_exon_variant 0.52 capreomycin Uncertain significance
linezolid
rrl 1476086 n.2429G>A non_coding_transcript_exon_variant 0.52 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476088 n.2431A>C non_coding_transcript_exon_variant 0.51 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476099 n.2442A>G non_coding_transcript_exon_variant 0.47 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476103 n.2446C>G non_coding_transcript_exon_variant 0.46 capreomycin Uncertain significance
linezolid
rrl 1476105 n.2448G>A non_coding_transcript_exon_variant 0.46 capreomycin Uncertain significance
linezolid
rrl 1476106 n.2449A>T non_coding_transcript_exon_variant 0.46 capreomycin Uncertain significance
linezolid
rrl 1476110 n.2453G>C non_coding_transcript_exon_variant 0.46 capreomycin Uncertain significance
linezolid
rrl 1476114 n.2457T>C non_coding_transcript_exon_variant 0.49 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476115 n.2458T>C non_coding_transcript_exon_variant 0.49 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476131 n.2474C>T non_coding_transcript_exon_variant 0.6 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476160 n.2503T>C non_coding_transcript_exon_variant 0.7 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476214 n.2557G>T non_coding_transcript_exon_variant 0.74 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476215 n.2558C>T non_coding_transcript_exon_variant 0.74 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476221 n.2564T>C non_coding_transcript_exon_variant 0.74 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476224 n.2567A>G non_coding_transcript_exon_variant 0.75 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476251 n.2594T>C non_coding_transcript_exon_variant 0.82 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476281 n.2624T>C non_coding_transcript_exon_variant 0.83 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476297 n.2640C>T non_coding_transcript_exon_variant 0.83 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476299 n.2642C>T non_coding_transcript_exon_variant 0.83 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476584 n.2927C>T non_coding_transcript_exon_variant 0.81 capreomycin Not assoc w R
linezolid Uncertain significance
rrl 1476594 n.2937C>T non_coding_transcript_exon_variant 0.8 capreomycin Not assoc w R
linezolid Uncertain significance
rrl 1476597 n.2940G>A non_coding_transcript_exon_variant 0.79 capreomycin Uncertain significance
linezolid
rrl 1476603 n.2946G>A non_coding_transcript_exon_variant 0.78 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476608 n.2951C>G non_coding_transcript_exon_variant 0.76 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476619 n.2962C>T non_coding_transcript_exon_variant 0.74 capreomycin Not assoc w R
linezolid Uncertain significance
rrl 1476628 n.2971T>A non_coding_transcript_exon_variant 0.73 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476665 n.3008T>A non_coding_transcript_exon_variant 0.5 capreomycin Uncertain significance
linezolid
rrl 1476666 n.3009C>T non_coding_transcript_exon_variant 0.49 capreomycin Uncertain significance
linezolid Uncertain significance
rrl 1476674 n.3017T>C non_coding_transcript_exon_variant 0.44 capreomycin Uncertain significance
linezolid Uncertain significance
rpsA 1833536 c.-6A>C upstream_gene_variant 0.48 pyrazinamide
rpsA 1833540 c.-2_-1delATinsC upstream_gene_variant 0.5 pyrazinamide
rpsA 1833547 c.6G>A synonymous_variant 0.5 pyrazinamide
rpsA 1833589 c.48A>C synonymous_variant 0.73 pyrazinamide
rpsA 1833595 c.54T>G synonymous_variant 0.71 pyrazinamide
rpsA 1833596 p.Ser19Ala missense_variant 0.7 pyrazinamide
rpsA 1833604 c.63C>T synonymous_variant 0.73 pyrazinamide
rpsA 1833616 c.75A>T synonymous_variant 0.72 pyrazinamide
rpsA 1833619 c.78A>C synonymous_variant 0.72 pyrazinamide
rpsA 1833625 c.84A>G synonymous_variant 0.76 pyrazinamide
rpsA 1833664 c.123C>G synonymous_variant 0.79 pyrazinamide
rpsA 1833676 c.135A>G synonymous_variant 0.79 pyrazinamide
rpsA 1833679 c.138G>T synonymous_variant 0.79 pyrazinamide
rpsA 1833685 c.144G>C synonymous_variant 0.78 pyrazinamide
rpsA 1833691 c.150G>A synonymous_variant 0.78 pyrazinamide
rpsA 1833694 c.153G>T synonymous_variant 0.78 pyrazinamide
rpsA 1833697 c.156C>T synonymous_variant 0.8 pyrazinamide
rpsA 1833700 c.159C>T synonymous_variant 0.78 pyrazinamide
rpsA 1833709 c.168C>T synonymous_variant 0.79 pyrazinamide
rpsA 1833724 c.183C>T synonymous_variant 0.76 pyrazinamide
rpsA 1833727 c.186G>C synonymous_variant 0.76 pyrazinamide
rpsA 1833733 c.192C>G synonymous_variant 0.72 pyrazinamide
rpsA 1833734 p.Ala65Ser missense_variant 0.74 pyrazinamide
rpsA 1833742 c.201A>G synonymous_variant 0.76 pyrazinamide
rpsA 1833745 c.204G>C synonymous_variant 0.76 pyrazinamide
rpsA 1833748 c.207C>G synonymous_variant 0.75 pyrazinamide
rpsA 1833760 c.219C>T synonymous_variant 0.79 pyrazinamide Not assoc w R - Interim
rpsA 1833787 c.246C>G synonymous_variant 0.78 pyrazinamide
rpsA 1833790 c.249T>C synonymous_variant 0.78 pyrazinamide
rpsA 1833802 c.261A>G synonymous_variant 0.81 pyrazinamide
rpsA 1833811 c.270G>T synonymous_variant 0.8 pyrazinamide
rpsA 1833823 c.282G>A synonymous_variant 0.8 pyrazinamide
rpsA 1833832 c.291G>A synonymous_variant 0.81 pyrazinamide
rpsA 1833838 c.297G>C synonymous_variant 0.84 pyrazinamide
rpsA 1833841 c.300C>G synonymous_variant 0.82 pyrazinamide
rpsA 1833847 c.306C>G synonymous_variant 0.83 pyrazinamide
rpsA 1833856 c.315A>G synonymous_variant 0.83 pyrazinamide
rpsA 1833862 c.321G>T synonymous_variant 0.84 pyrazinamide
rpsA 1833874 c.333T>G synonymous_variant 0.86 pyrazinamide
rpsA 1833886 c.345C>G synonymous_variant 0.85 pyrazinamide
rpsA 1833894 p.Ala118Glu missense_variant 0.83 pyrazinamide
rpsA 1833928 c.387G>C synonymous_variant 0.9 pyrazinamide
rpsA 1833949 c.408T>C synonymous_variant 0.89 pyrazinamide
rpsA 1833961 c.420C>G synonymous_variant 0.88 pyrazinamide
rpsA 1833970 c.429G>T synonymous_variant 0.88 pyrazinamide
rpsA 1833979 c.438T>C synonymous_variant 0.86 pyrazinamide
rpsA 1833991 c.450C>G synonymous_variant 0.85 pyrazinamide
rpsA 1834000 c.459G>C synonymous_variant 0.85 pyrazinamide
rpsA 1834009 c.468C>T synonymous_variant 0.83 pyrazinamide
rpsA 1834012 c.471G>C synonymous_variant 0.83 pyrazinamide
rpsA 1834015 c.474G>C synonymous_variant 0.83 pyrazinamide
rpsA 1834021 c.480C>T synonymous_variant 0.82 pyrazinamide
rpsA 1834030 c.489C>G synonymous_variant 0.8 pyrazinamide
rpsA 1834033 c.492C>T synonymous_variant 0.79 pyrazinamide
rpsA 1834073 p.Lys178Arg missense_variant 0.58 pyrazinamide
rpsA 1834096 c.555G>C synonymous_variant 0.45 pyrazinamide
rpsA 1834099 c.558C>G synonymous_variant 0.41 pyrazinamide
rpsA 1834108 c.567C>G synonymous_variant 0.36 pyrazinamide
rpsA 1834114 c.573G>C synonymous_variant 0.32 pyrazinamide
rpsA 1834177 c.636A>C synonymous_variant 0.31 pyrazinamide Not assoc w R - Interim
rpsA 1834228 c.687C>A synonymous_variant 0.68 pyrazinamide
rpsA 1834231 c.690T>G synonymous_variant 0.67 pyrazinamide
rpsA 1834234 c.693G>T synonymous_variant 0.67 pyrazinamide Not assoc w R - Interim
rpsA 1834240 c.699T>C synonymous_variant 0.68 pyrazinamide
rpsA 1834246 c.705G>T synonymous_variant 0.72 pyrazinamide
rpsA 1834249 c.708T>C synonymous_variant 0.74 pyrazinamide
rpsA 1834252 c.711C>G synonymous_variant 0.74 pyrazinamide
rpsA 1834261 c.720A>G synonymous_variant 0.74 pyrazinamide Not assoc w R - Interim
rpsA 1834264 c.723G>C synonymous_variant 0.74 pyrazinamide
rpsA 1834279 c.738C>T synonymous_variant 0.75 pyrazinamide Not assoc w R - Interim
rpsA 1834294 c.753G>T synonymous_variant 0.76 pyrazinamide
rpsA 1834297 c.756C>T synonymous_variant 0.76 pyrazinamide
rpsA 1834303 c.762T>G synonymous_variant 0.77 pyrazinamide
rpsA 1834306 c.765T>C synonymous_variant 0.76 pyrazinamide
rpsA 1834327 c.786G>T synonymous_variant 0.81 pyrazinamide
rpsA 1834357 c.816T>C synonymous_variant 0.86 pyrazinamide
rpsA 1834366 c.825A>G synonymous_variant 0.87 pyrazinamide Not assoc w R - Interim
rpsA 1834375 c.834G>C synonymous_variant 0.87 pyrazinamide
rpsA 1834396 c.855G>C synonymous_variant 0.86 pyrazinamide
rpsA 1834411 c.870T>G synonymous_variant 0.84 pyrazinamide
rpsA 1834414 c.873C>T synonymous_variant 0.86 pyrazinamide
rpsA 1834417 c.876G>C synonymous_variant 0.82 pyrazinamide
rpsA 1834420 c.879C>T synonymous_variant 0.81 pyrazinamide
rpsA 1834423 c.882G>C synonymous_variant 0.81 pyrazinamide
rpsA 1834429 c.888C>T synonymous_variant 0.83 pyrazinamide
rpsA 1834438 c.897C>T synonymous_variant 0.81 pyrazinamide Not assoc w R - Interim
rpsA 1834451 c.910T>C synonymous_variant 0.85 pyrazinamide
rpsA 1834456 c.915T>G synonymous_variant 0.86 pyrazinamide
rpsA 1834468 c.927A>G synonymous_variant 0.83 pyrazinamide
rpsA 1834477 c.936C>T synonymous_variant 0.82 pyrazinamide Not assoc w R - Interim
rpsA 1834489 c.948T>C synonymous_variant 0.78 pyrazinamide
rpsA 1834519 c.978G>C synonymous_variant 0.69 pyrazinamide
rpsA 1834520 p.Ala327Ser missense_variant 0.68 pyrazinamide
rpsA 1834528 c.987T>C synonymous_variant 0.69 pyrazinamide
rpsA 1834534 c.993C>T synonymous_variant 0.71 pyrazinamide
rpsA 1834543 c.1002C>G synonymous_variant 0.71 pyrazinamide
rpsA 1834546 c.1005T>C synonymous_variant 0.69 pyrazinamide
rpsA 1834552 c.1011G>T synonymous_variant 0.68 pyrazinamide
rpsA 1834555 c.1014T>G synonymous_variant 0.68 pyrazinamide
rpsA 1834557 p.Ala339Gly missense_variant 0.69 pyrazinamide
rpsA 1834606 c.1065C>T synonymous_variant 0.65 pyrazinamide
rpsA 1834609 c.1068T>C synonymous_variant 0.63 pyrazinamide
rpsA 1834619 c.1078T>C synonymous_variant 0.61 pyrazinamide
rpsA 1834622 c.1081_1083delTCGinsAGC synonymous_variant 0.61 pyrazinamide
rpsA 1834633 c.1092A>G synonymous_variant 0.67 pyrazinamide
rpsA 1834639 c.1098T>C synonymous_variant 0.68 pyrazinamide
rpsA 1834645 c.1104C>T synonymous_variant 0.73 pyrazinamide
rpsA 1834666 c.1125G>C synonymous_variant 0.71 pyrazinamide
rpsA 1834667 p.Ala376Ser missense_variant 0.71 pyrazinamide
rpsA 1834690 c.1149T>C synonymous_variant 0.75 pyrazinamide
rpsA 1834700 p.Gln387Ala missense_variant 0.75 pyrazinamide
rpsA 1834705 c.1164C>G synonymous_variant 0.77 pyrazinamide
rpsA 1834720 c.1179C>G synonymous_variant 0.72 pyrazinamide
rpsA 1834732 c.1191T>C synonymous_variant 0.68 pyrazinamide
rpsA 1834738 c.1197A>G synonymous_variant 0.65 pyrazinamide
rpsA 1834753 c.1212T>C synonymous_variant 0.6 pyrazinamide
rpsA 1834759 c.1218A>C synonymous_variant 0.62 pyrazinamide
rpsA 1834765 p.Glu408Asp missense_variant 0.6 pyrazinamide
rpsA 1834774 c.1233C>T synonymous_variant 0.57 pyrazinamide
rpsA 1834776 p.Ala412Glu missense_variant 0.57 pyrazinamide
rpsA 1834780 c.1239A>G synonymous_variant 0.57 pyrazinamide
rpsA 1834789 c.1248T>C synonymous_variant 0.56 pyrazinamide
rpsA 1834813 c.1272G>T synonymous_variant 0.35 pyrazinamide
tsnR 1853361 c.-245T>C upstream_gene_variant 0.46 linezolid
tsnR 1853372 c.-234A>G upstream_gene_variant 0.46 linezolid
tsnR 1853375 c.-231G>C upstream_gene_variant 0.45 linezolid
tsnR 1853381 c.-225C>T upstream_gene_variant 0.47 linezolid
tsnR 1853384 c.-222G>C upstream_gene_variant 0.47 linezolid
tsnR 1853387 c.-219T>G upstream_gene_variant 0.47 linezolid
tsnR 1853390 c.-216G>C upstream_gene_variant 0.49 linezolid
tsnR 1853394 c.-212_-211delCTinsGC upstream_gene_variant 0.49 linezolid
tsnR 1853417 c.-189G>C upstream_gene_variant 0.46 linezolid
tsnR 1853418 c.-188_-186delCTTinsTTC upstream_gene_variant 0.46 linezolid
tsnR 1853435 c.-171G>A upstream_gene_variant 0.29 linezolid
tsnR 1854300 p.Leu232Pro missense_variant 1.0 linezolid Not assoc w R
PPE35 2170568 p.Ile15Met missense_variant 1.0 pyrazinamide Not assoc w R
Rv1979c 2222929 p.Tyr79Cys missense_variant 0.92 bedaquiline Uncertain significance
clofazimine Uncertain significance
Rv1979c 2223293 c.-129A>G upstream_gene_variant 1.0 bedaquiline Not assoc w R - Interim
clofazimine Not assoc w R
kasA 2517917 c.-198G>C upstream_gene_variant 0.55 isoniazid
kasA 2517941 c.-174C>G upstream_gene_variant 0.51 isoniazid
kasA 2517953 c.-162C>T upstream_gene_variant 0.45 isoniazid
kasA 2517962 c.-153C>G upstream_gene_variant 0.47 isoniazid
kasA 2517968 c.-147T>A upstream_gene_variant 0.44 isoniazid
kasA 2517974 c.-141T>C upstream_gene_variant 0.37 isoniazid
kasA 2517989 c.-126T>C upstream_gene_variant 0.23 isoniazid
kasA 2517992 c.-123C>G upstream_gene_variant 0.21 isoniazid
kasA 2517993 c.-122_-121delGCinsAA upstream_gene_variant 0.21 isoniazid
kasA 2518002 c.-113C>G upstream_gene_variant 0.2 isoniazid
kasA 2518726 c.612G>C synonymous_variant 0.35 isoniazid
kasA 2518738 c.624G>C synonymous_variant 0.45 isoniazid
kasA 2518756 c.642G>C synonymous_variant 0.48 isoniazid
kasA 2518768 c.654C>G synonymous_variant 0.47 isoniazid
kasA 2518771 c.657C>G synonymous_variant 0.47 isoniazid
kasA 2518774 c.660C>T synonymous_variant 0.45 isoniazid
kasA 2518783 c.669T>G synonymous_variant 0.47 isoniazid
kasA 2518787 p.Arg225Lys missense_variant 0.47 isoniazid
kasA 2518792 c.678C>T synonymous_variant 0.45 isoniazid
kasA 2518795 c.681C>T synonymous_variant 0.45 isoniazid
kasA 2518798 c.684G>C synonymous_variant 0.44 isoniazid
kasA 2518822 c.708C>A synonymous_variant 0.43 isoniazid
kasA 2518825 c.711T>C synonymous_variant 0.43 isoniazid
kasA 2518846 c.732G>T synonymous_variant 0.45 isoniazid
kasA 2518849 c.735G>C synonymous_variant 0.48 isoniazid
kasA 2518853 p.Leu247Val missense_variant 0.48 isoniazid
kasA 2518864 c.750G>C synonymous_variant 0.46 isoniazid
ahpC 2726593 p.Val134Ala missense_variant 0.5 isoniazid
ahpC 2726600 c.408T>C synonymous_variant 0.56 isoniazid
ahpC 2726613 p.Asn141Asp missense_variant 0.54 isoniazid
ahpC 2726619 p.Glu143Ile missense_variant 0.53 isoniazid
ahpC 2726624 c.432C>T synonymous_variant 0.53 isoniazid Not assoc w R - Interim
ahpC 2726636 c.444G>C synonymous_variant 0.51 isoniazid
ahpC 2726638 p.Ala149Val missense_variant 0.53 isoniazid
ahpC 2726642 c.450C>G synonymous_variant 0.53 isoniazid
ahpC 2726645 c.453C>A synonymous_variant 0.55 isoniazid
ahpC 2726651 c.459G>C synonymous_variant 0.53 isoniazid
ahpC 2726657 c.465A>C synonymous_variant 0.51 isoniazid Not assoc w R - Interim
ahpC 2726666 c.474C>G synonymous_variant 0.5 isoniazid
ahpC 2726669 c.477T>C synonymous_variant 0.5 isoniazid
ahpC 2726675 c.483A>G synonymous_variant 0.5 isoniazid
ahpC 2726678 c.486G>C synonymous_variant 0.5 isoniazid
ahpC 2726681 c.489A>C synonymous_variant 0.5 isoniazid Not assoc w R - Interim
ahpC 2726687 c.495C>T synonymous_variant 0.5 isoniazid
ahpC 2726693 c.501C>G synonymous_variant 0.48 isoniazid
ahpC 2726696 c.504C>G synonymous_variant 0.48 isoniazid
ahpC 2726717 c.525A>C synonymous_variant 0.44 isoniazid
ahpC 2726735 c.543C>T synonymous_variant 0.29 isoniazid
Rv2477c 2783023 c.1020G>C synonymous_variant 0.42 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783035 c.1008G>C synonymous_variant 0.55 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783044 c.999G>C synonymous_variant 0.59 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783047 p.Asp332Glu missense_variant 0.59 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin Uncertain significance
ethambutol Uncertain significance
amikacin
Rv2477c 2783051 p.Tyr331Phe missense_variant 0.61 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783053 c.990C>T synonymous_variant 0.61 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783059 c.984T>C synonymous_variant 0.64 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783068 p.Asp325Glu missense_variant 0.61 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783077 c.966T>C synonymous_variant 0.61 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783086 c.957C>T synonymous_variant 0.58 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783092 c.951A>G synonymous_variant 0.56 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
amikacin
Rv2477c 2783095 c.948C>A synonymous_variant 0.56 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783098 c.945C>G synonymous_variant 0.56 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783101 c.942G>C synonymous_variant 0.54 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783105 p.Val313Thr missense_variant 0.53 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783107 c.936G>C synonymous_variant 0.52 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783116 c.927T>C synonymous_variant 0.52 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783119 c.924G>A synonymous_variant 0.52 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783137 c.906C>G synonymous_variant 0.56 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783157 p.Ala296Thr missense_variant 0.51 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783158 p.Ala295Val missense_variant 0.53 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin Uncertain significance
ethambutol Uncertain significance
amikacin
Rv2477c 2783173 c.870C>A synonymous_variant 0.45 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783182 c.861C>T synonymous_variant 0.26 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783185 c.858G>T synonymous_variant 0.23 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783192 p.Ser284Asn missense_variant 0.21 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783194 c.849A>G synonymous_variant 0.22 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783203 c.840C>G synonymous_variant 0.22 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783263 c.780G>C synonymous_variant 0.31 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783275 c.768C>G synonymous_variant 0.36 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783278 c.765A>G synonymous_variant 0.36 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783284 c.759G>C synonymous_variant 0.37 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783289 p.Leu252Ile missense_variant 0.37 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783290 c.753G>T synonymous_variant 0.38 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783296 c.747C>A synonymous_variant 0.39 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783299 c.744A>G synonymous_variant 0.39 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783302 c.741A>G synonymous_variant 0.42 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783311 c.732T>C synonymous_variant 0.42 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783317 c.726G>C synonymous_variant 0.41 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783344 c.699C>T synonymous_variant 0.4 kanamycin
levofloxacin
moxifloxacin
streptomycin Not assoc w R - Interim
rifampicin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
amikacin
Rv2477c 2783347 c.696C>T synonymous_variant 0.39 kanamycin
levofloxacin
moxifloxacin
streptomycin Not assoc w R - Interim
rifampicin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
amikacin
Rv2477c 2783353 c.690T>C synonymous_variant 0.39 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783356 c.687C>G synonymous_variant 0.39 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783362 c.681G>C synonymous_variant 0.38 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783371 c.672A>G synonymous_variant 0.39 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783374 c.669G>C synonymous_variant 0.39 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783377 c.666C>G synonymous_variant 0.4 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783395 c.648T>A synonymous_variant 0.38 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783404 c.639C>T synonymous_variant 0.25 kanamycin Not assoc w R - Interim
levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
streptomycin
rifampicin Not assoc w R - Interim
ethambutol
amikacin Not assoc w R - Interim
Rv2477c 2783407 c.636C>G synonymous_variant 0.24 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783410 c.633G>C synonymous_variant 0.2 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783456 p.Gln196Leu missense_variant 0.28 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783461 c.582T>C synonymous_variant 0.31 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783464 c.579A>G synonymous_variant 0.33 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783467 c.576G>C synonymous_variant 0.37 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783473 c.570A>G synonymous_variant 0.45 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783485 c.558G>C synonymous_variant 0.53 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783491 c.552C>T synonymous_variant 0.52 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783499 c.544T>C synonymous_variant 0.53 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783502 c.541T>C synonymous_variant 0.54 kanamycin Not assoc w R - Interim
levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
streptomycin Not assoc w R - Interim
rifampicin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
amikacin Not assoc w R - Interim
Rv2477c 2783509 c.534C>A synonymous_variant 0.53 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783512 c.531A>G synonymous_variant 0.55 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783515 c.528C>G synonymous_variant 0.57 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783520 c.523T>C synonymous_variant 0.58 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
amikacin
Rv2477c 2783523 c.520C>T synonymous_variant 0.56 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783527 c.516A>G synonymous_variant 0.56 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783548 c.495T>C synonymous_variant 0.58 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783563 c.480A>G synonymous_variant 0.55 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783568 p.Asn159His missense_variant 0.55 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783569 c.474C>G synonymous_variant 0.53 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783572 c.471A>G synonymous_variant 0.54 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783584 p.Ala153Pro missense_variant 0.56 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783593 c.450T>C synonymous_variant 0.55 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783596 c.447C>T synonymous_variant 0.55 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783611 c.432C>G synonymous_variant 0.48 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783620 c.423C>G synonymous_variant 0.45 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783805 p.Asn80Asp missense_variant 0.33 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783815 c.228A>G synonymous_variant 0.31 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783821 c.222A>G synonymous_variant 0.32 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783830 c.213C>G synonymous_variant 0.3 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783833 c.210G>C synonymous_variant 0.29 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783836 p.Thr69Ser missense_variant 0.3 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783842 c.201C>G synonymous_variant 0.33 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783846 p.Thr66Asn missense_variant 0.33 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783854 c.189C>T synonymous_variant 0.35 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
amikacin
Rv2477c 2783857 c.186C>G synonymous_variant 0.33 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783860 p.Asp61Glu missense_variant 0.34 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783883 c.160T>C synonymous_variant 0.37 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783884 c.159T>C synonymous_variant 0.37 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783897 p.Arg49Lys missense_variant 0.38 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783901 c.142T>C synonymous_variant 0.38 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783902 c.141C>T synonymous_variant 0.38 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783908 c.135G>C synonymous_variant 0.37 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783920 c.123G>C synonymous_variant 0.38 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783926 c.117C>G synonymous_variant 0.36 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783935 c.108C>G synonymous_variant 0.36 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783941 c.102C>T synonymous_variant 0.33 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin
ethambutol
amikacin
Rv2477c 2783947 c.96C>A synonymous_variant 0.29 kanamycin
levofloxacin
moxifloxacin
streptomycin
rifampicin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
amikacin
thyA 3073925 c.547T>C synonymous_variant 0.31 para-aminosalicylic_acid
thyA 3073926 c.546G>A synonymous_variant 0.31 para-aminosalicylic_acid
thyA 3073929 c.543T>C synonymous_variant 0.34 para-aminosalicylic_acid
thyA 3073950 c.522G>C synonymous_variant 0.39 para-aminosalicylic_acid
thyA 3073953 c.519T>G synonymous_variant 0.39 para-aminosalicylic_acid
thyA 3073956 c.516G>C synonymous_variant 0.39 para-aminosalicylic_acid
thyA 3073959 c.513T>C synonymous_variant 0.39 para-aminosalicylic_acid
thyA 3073962 c.510G>A synonymous_variant 0.39 para-aminosalicylic_acid
thyA 3073965 c.507C>T synonymous_variant 0.39 para-aminosalicylic_acid
thyA 3073980 c.492C>T synonymous_variant 0.43 para-aminosalicylic_acid
thyA 3073983 c.489C>G synonymous_variant 0.43 para-aminosalicylic_acid
thyA 3073989 c.483T>C synonymous_variant 0.39 para-aminosalicylic_acid
thyA 3073992 c.480C>T synonymous_variant 0.38 para-aminosalicylic_acid
thyA 3073999 p.Arg158Lys missense_variant 0.39 para-aminosalicylic_acid
thyA 3074004 c.468T>C synonymous_variant 0.41 para-aminosalicylic_acid
thyA 3074010 c.462C>G synonymous_variant 0.45 para-aminosalicylic_acid
thyA 3074013 c.459C>T synonymous_variant 0.47 para-aminosalicylic_acid
thyA 3074028 c.444G>C synonymous_variant 0.5 para-aminosalicylic_acid
thyA 3074031 c.441T>C synonymous_variant 0.5 para-aminosalicylic_acid
thyA 3074034 c.438T>C synonymous_variant 0.5 para-aminosalicylic_acid
thyA 3074053 p.Arg140Gln missense_variant 0.36 para-aminosalicylic_acid
thyA 3074056 p.Glu139Pro missense_variant 0.34 para-aminosalicylic_acid
thyA 3074070 c.402C>T synonymous_variant 0.3 para-aminosalicylic_acid
thyA 3074076 c.396C>A synonymous_variant 0.28 para-aminosalicylic_acid
thyA 3074082 c.390G>T synonymous_variant 0.23 para-aminosalicylic_acid
thyA 3074089 p.Ile128Asn missense_variant 0.23 para-aminosalicylic_acid
thyA 3074091 c.381C>G synonymous_variant 0.23 para-aminosalicylic_acid
thyA 3074094 c.378G>C synonymous_variant 0.24 para-aminosalicylic_acid
thyA 3074097 c.375C>G synonymous_variant 0.24 para-aminosalicylic_acid
thyA 3074103 c.369C>G synonymous_variant 0.25 para-aminosalicylic_acid
thyA 3074108 p.Asp122Asn missense_variant 0.24 para-aminosalicylic_acid
thyA 3074112 c.360C>T synonymous_variant 0.25 para-aminosalicylic_acid
thyA 3074120 c.352T>C synonymous_variant 0.24 para-aminosalicylic_acid
thyA 3074127 c.345G>A synonymous_variant 0.22 para-aminosalicylic_acid
thyA 3074130 c.342G>C synonymous_variant 0.22 para-aminosalicylic_acid
mtrB 3625065 p.Met517Leu missense_variant 1.0 rifampicin Not assoc w R
bedaquiline Uncertain significance
mtrB 3625656 c.958T>C synonymous_variant 0.36 rifampicin Not assoc w R - Interim
bedaquiline Not assoc w R - Interim
mtrB 3625705 c.909C>G synonymous_variant 0.64 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3625708 c.906C>T synonymous_variant 0.65 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3625711 c.903C>T synonymous_variant 0.65 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3625720 c.894G>C synonymous_variant 0.68 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3625729 c.885A>G synonymous_variant 0.7 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3625732 c.882C>T synonymous_variant 0.72 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3625735 c.879C>A synonymous_variant 0.71 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3625744 c.870G>A synonymous_variant 0.72 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3625750 c.864G>A synonymous_variant 0.73 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3625755 p.Ala287Thr missense_variant 0.73 rifampicin Uncertain significance
bedaquiline
mtrB 3625761 p.Gln285Glu missense_variant 0.76 rifampicin Uncertain significance
bedaquiline
mtrB 3625762 c.852A>T synonymous_variant 0.76 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3625765 c.849C>G synonymous_variant 0.78 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3625774 c.840G>A synonymous_variant 0.81 rifampicin Not assoc w R - Interim
bedaquiline
lpqB 3625783 c.-873C>T upstream_gene_variant 0.81 rifampicin
bedaquiline
mtrB 3625806 c.808A>C synonymous_variant 0.73 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3625807 c.807C>G synonymous_variant 0.73 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3625813 c.801C>T synonymous_variant 0.73 rifampicin Not assoc w R - Interim
bedaquiline Not assoc w R - Interim
mtrB 3625819 p.Glu265Val missense_variant 0.72 rifampicin Uncertain significance
bedaquiline
mtrB 3625837 c.777C>G synonymous_variant 0.71 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3625855 c.759G>A synonymous_variant 0.66 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3625867 c.747A>G synonymous_variant 0.6 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3625876 c.738G>C synonymous_variant 0.6 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3625882 c.732G>A synonymous_variant 0.59 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3625899 p.Val239Leu missense_variant 0.46 rifampicin
bedaquiline
mtrB 3626681 c.-68C>T upstream_gene_variant 0.41 rifampicin
bedaquiline
mtrB 3626684 c.-71G>A upstream_gene_variant 0.44 rifampicin
bedaquiline
mtrB 3626704 c.-91C>T upstream_gene_variant 0.68 rifampicin
bedaquiline
mtrB 3626711 c.-98T>C upstream_gene_variant 0.7 rifampicin
bedaquiline
mtrB 3626717 c.-104C>T upstream_gene_variant 0.7 rifampicin
bedaquiline
mtrB 3626726 c.-113T>C upstream_gene_variant 0.69 rifampicin
bedaquiline
mtrB 3626732 c.-119A>G upstream_gene_variant 0.71 rifampicin
bedaquiline
mtrA 3626741 c.609C>G synonymous_variant 0.76 rifampicin Not assoc w R - Interim
bedaquiline
mtrA 3626756 c.594C>G synonymous_variant 0.76 rifampicin Not assoc w R - Interim
bedaquiline
mtrA 3626759 c.591T>C synonymous_variant 0.79 rifampicin Not assoc w R - Interim
bedaquiline
mtrA 3626762 c.588G>C synonymous_variant 0.79 rifampicin Not assoc w R - Interim
bedaquiline
mtrA 3626786 c.564A>G synonymous_variant 0.83 rifampicin Not assoc w R - Interim
bedaquiline
mtrA 3626792 c.558G>T synonymous_variant 0.82 rifampicin Not assoc w R - Interim
bedaquiline
mtrA 3626804 c.546A>G synonymous_variant 0.83 rifampicin Not assoc w R - Interim
bedaquiline
mtrA 3626825 c.525T>A synonymous_variant 0.84 rifampicin Not assoc w R - Interim
bedaquiline
mtrA 3626846 c.504G>A synonymous_variant 0.73 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3626852 c.-239G>A upstream_gene_variant 0.67 rifampicin
bedaquiline
mtrB 3626857 c.-244T>C upstream_gene_variant 0.66 rifampicin
bedaquiline
mtrB 3626858 c.-245A>G upstream_gene_variant 0.66 rifampicin
bedaquiline
mtrB 3626861 c.-248C>G upstream_gene_variant 0.67 rifampicin
bedaquiline
mtrB 3626866 c.-253T>C upstream_gene_variant 0.67 rifampicin
bedaquiline
mtrB 3626876 c.-263A>G upstream_gene_variant 0.66 rifampicin
bedaquiline
mtrB 3626885 c.-272A>C upstream_gene_variant 0.62 rifampicin
bedaquiline
mtrB 3626890 c.-277T>C upstream_gene_variant 0.56 rifampicin
bedaquiline
mtrB 3626903 c.-290T>C upstream_gene_variant 0.44 rifampicin
bedaquiline
mtrA 3626906 p.Asn148Glu missense_variant 0.43 rifampicin
bedaquiline
mtrB 3626912 c.-299T>G upstream_gene_variant 0.41 rifampicin
bedaquiline
mtrB 3626915 c.-302C>G upstream_gene_variant 0.41 rifampicin
bedaquiline
mtrB 3626927 c.-314G>C upstream_gene_variant 0.35 rifampicin
bedaquiline
mtrB 3626930 c.-317A>G upstream_gene_variant 0.35 rifampicin
bedaquiline
mtrA 3627053 c.297C>T synonymous_variant 0.55 rifampicin Not assoc w R - Interim
bedaquiline
mtrA 3627056 c.294C>T synonymous_variant 0.57 rifampicin Not assoc w R - Interim
bedaquiline
mtrA 3627059 c.291G>T synonymous_variant 0.58 rifampicin Not assoc w R - Interim
bedaquiline
mtrA 3627068 c.282T>C synonymous_variant 0.59 rifampicin Not assoc w R - Interim
bedaquiline
mtrA 3627073 c.277C>T synonymous_variant 0.62 rifampicin Not assoc w R - Interim
bedaquiline Not assoc w R - Interim
mtrA 3627098 c.252A>C synonymous_variant 0.55 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3627104 c.-491C>T upstream_gene_variant 0.55 rifampicin
bedaquiline
mtrB 3627110 c.-497G>C upstream_gene_variant 0.56 rifampicin
bedaquiline
mtrA 3627119 c.231T>G synonymous_variant 0.55 rifampicin Not assoc w R - Interim
bedaquiline
mtrB 3627122 c.-509T>A upstream_gene_variant 0.56 rifampicin
bedaquiline
mtrB 3627128 c.-515T>C upstream_gene_variant 0.57 rifampicin
bedaquiline
mtrA 3627133 p.Ala73Ser missense_variant 0.57 rifampicin
bedaquiline
mtrB 3627139 c.-526T>C upstream_gene_variant 0.59 rifampicin
bedaquiline
mtrB 3627143 c.-530G>C upstream_gene_variant 0.59 rifampicin
bedaquiline
mtrB 3627149 c.-536G>A upstream_gene_variant 0.59 rifampicin
bedaquiline
mtrB 3627152 c.-539C>T upstream_gene_variant 0.58 rifampicin
bedaquiline
mtrB 3627167 c.-554T>G upstream_gene_variant 0.45 rifampicin
bedaquiline
mtrB 3627170 c.-557C>G upstream_gene_variant 0.39 rifampicin
bedaquiline
rpoA 3877542 c.966C>A synonymous_variant 0.46 rifampicin Not assoc w R - Interim
rpoA 3877545 c.963G>T synonymous_variant 0.44 rifampicin Not assoc w R - Interim
rpoA 3877548 c.960C>T synonymous_variant 0.47 rifampicin Not assoc w R - Interim
rpoA 3877554 c.954G>A synonymous_variant 0.52 rifampicin Not assoc w R - Interim
rpoA 3877560 c.948C>T synonymous_variant 0.59 rifampicin Not assoc w R - Interim
rpoA 3877569 p.Pro313Thr missense_variant 0.64 rifampicin Uncertain significance
rpoA 3877587 c.921A>G synonymous_variant 0.71 rifampicin Not assoc w R - Interim
rpoA 3877593 c.915C>T synonymous_variant 0.73 rifampicin Not assoc w R - Interim
rpoA 3877614 c.894G>A synonymous_variant 0.73 rifampicin Not assoc w R - Interim
rpoA 3877620 c.888G>A synonymous_variant 0.74 rifampicin Not assoc w R - Interim
rpoA 3877638 c.870T>C synonymous_variant 0.7 rifampicin Not assoc w R - Interim
rpoA 3877656 c.852T>G synonymous_variant 0.74 rifampicin Not assoc w R - Interim
rpoA 3877665 c.843C>G synonymous_variant 0.78 rifampicin Not assoc w R - Interim
rpoA 3877677 c.831G>C synonymous_variant 0.78 rifampicin Not assoc w R - Interim
rpoA 3877680 c.828G>C synonymous_variant 0.77 rifampicin Not assoc w R - Interim
rpoA 3877686 c.822A>G synonymous_variant 0.78 rifampicin Not assoc w R - Interim
rpoA 3877692 c.816G>C synonymous_variant 0.78 rifampicin Not assoc w R - Interim
rpoA 3877704 c.804G>T synonymous_variant 0.78 rifampicin Not assoc w R - Interim
rpoA 3877728 c.780C>G synonymous_variant 0.75 rifampicin
rpoA 3877731 c.777G>C synonymous_variant 0.75 rifampicin
rpoA 3877734 c.774G>C synonymous_variant 0.75 rifampicin
rpoA 3877737 c.771G>C synonymous_variant 0.75 rifampicin
rpoA 3877743 c.765T>C synonymous_variant 0.71 rifampicin Not assoc w R - Interim
rpoA 3877749 c.759C>T synonymous_variant 0.74 rifampicin Not assoc w R - Interim
rpoA 3877752 p.Asp252Glu missense_variant 0.74 rifampicin
rpoA 3877755 c.753C>T synonymous_variant 0.75 rifampicin
rpoA 3877758 c.750G>C synonymous_variant 0.75 rifampicin
rpoA 3877764 c.744C>A synonymous_variant 0.75 rifampicin
rpoA 3877770 c.738A>G synonymous_variant 0.75 rifampicin Not assoc w R - Interim
rpoA 3877773 c.735G>C synonymous_variant 0.78 rifampicin
rpoA 3877776 c.732T>C synonymous_variant 0.8 rifampicin Not assoc w R - Interim
rpoA 3877782 c.726T>C synonymous_variant 0.85 rifampicin Not assoc w R - Interim
rpoA 3877797 c.711G>A synonymous_variant 0.86 rifampicin Not assoc w R - Interim
rpoA 3877815 c.693C>T synonymous_variant 0.85 rifampicin Not assoc w R - Interim
rpoA 3877818 c.690A>G synonymous_variant 0.85 rifampicin Not assoc w R - Interim
rpoA 3877824 c.684G>A synonymous_variant 0.86 rifampicin Not assoc w R - Interim
rpoA 3877836 c.672A>G synonymous_variant 0.84 rifampicin Not assoc w R - Interim
rpoA 3877839 c.669G>A synonymous_variant 0.84 rifampicin Not assoc w R - Interim
rpoA 3877848 c.660C>T synonymous_variant 0.88 rifampicin Not assoc w R - Interim
rpoA 3877856 c.652T>C synonymous_variant 0.88 rifampicin Not assoc w R - Interim
rpoA 3877875 c.633T>C synonymous_variant 0.88 rifampicin Not assoc w R - Interim
rpoA 3877896 c.612G>A synonymous_variant 0.87 rifampicin
rpoA 3877905 c.603A>G synonymous_variant 0.86 rifampicin Not assoc w R - Interim
rpoA 3877908 c.600T>C synonymous_variant 0.86 rifampicin Not assoc w R - Interim
rpoA 3877920 c.588G>C synonymous_variant 0.85 rifampicin Not assoc w R - Interim
rpoA 3877923 c.585C>T synonymous_variant 0.84 rifampicin Not assoc w R - Interim
rpoA 3877929 p.Ile193Val missense_variant 0.82 rifampicin Uncertain significance
rpoA 3877962 c.546G>T synonymous_variant 0.81 rifampicin Not assoc w R - Interim
rpoA 3877971 p.Asp179Glu missense_variant 0.82 rifampicin Uncertain significance
rpoA 3877974 c.534G>T synonymous_variant 0.79 rifampicin Not assoc w R - Interim
rpoA 3877977 p.Lys177Asn missense_variant 0.79 rifampicin Uncertain significance
rpoA 3877989 c.519A>G synonymous_variant 0.78 rifampicin Not assoc w R - Interim
rpoA 3878001 c.507A>G synonymous_variant 0.76 rifampicin Not assoc w R - Interim
rpoA 3878019 c.489A>C synonymous_variant 0.72 rifampicin
rpoA 3878022 c.486T>C synonymous_variant 0.7 rifampicin
rpoA 3878025 c.483C>T synonymous_variant 0.7 rifampicin
rpoA 3878028 c.480G>T synonymous_variant 0.7 rifampicin
rpoA 3878031 c.477T>C synonymous_variant 0.68 rifampicin
rpoA 3878034 c.474A>G synonymous_variant 0.68 rifampicin
rpoA 3878046 c.462T>C synonymous_variant 0.69 rifampicin
rpoA 3878050 p.Arg153Lys missense_variant 0.69 rifampicin
rpoA 3878055 c.453A>G synonymous_variant 0.69 rifampicin
rpoA 3878061 c.447G>C synonymous_variant 0.7 rifampicin
rpoA 3878070 c.438T>C synonymous_variant 0.67 rifampicin
rpoA 3878073 c.435C>T synonymous_variant 0.69 rifampicin
rpoA 3878079 c.429C>T synonymous_variant 0.74 rifampicin Not assoc w R - Interim
rpoA 3878091 c.417C>T synonymous_variant 0.73 rifampicin Not assoc w R - Interim
rpoA 3878102 p.Val136Ile missense_variant 0.69 rifampicin
rpoA 3878103 c.405A>G synonymous_variant 0.69 rifampicin
rpoA 3878118 c.390T>C synonymous_variant 0.75 rifampicin
rpoA 3878130 c.378C>G synonymous_variant 0.76 rifampicin
rpoA 3878142 p.Gly122Asp missense_variant 0.72 rifampicin Uncertain significance
rpoA 3878160 c.348C>G synonymous_variant 0.79 rifampicin Not assoc w R - Interim
rpoA 3878163 c.345C>T synonymous_variant 0.8 rifampicin Not assoc w R - Interim
rpoA 3878169 c.339G>C synonymous_variant 0.8 rifampicin Not assoc w R - Interim
rpoA 3878184 c.324C>T synonymous_variant 0.8 rifampicin Not assoc w R - Interim
rpoA 3878193 c.315T>C synonymous_variant 0.82 rifampicin Not assoc w R - Interim
rpoA 3878196 p.Glu104Ala missense_variant 0.83 rifampicin Uncertain significance
rpoA 3878205 c.303T>C synonymous_variant 0.84 rifampicin Not assoc w R - Interim
rpoA 3878217 c.291A>G synonymous_variant 0.85 rifampicin Not assoc w R - Interim
rpoA 3878259 c.249G>C synonymous_variant 0.87 rifampicin Not assoc w R - Interim
rpoA 3878271 c.237T>C synonymous_variant 0.86 rifampicin Not assoc w R - Interim
rpoA 3878283 p.Glu75Asp missense_variant 0.87 rifampicin Uncertain significance
rpoA 3878292 c.216T>C synonymous_variant 0.85 rifampicin Not assoc w R - Interim
rpoA 3878298 c.210A>G synonymous_variant 0.85 rifampicin Not assoc w R - Interim
rpoA 3878301 c.207C>G synonymous_variant 0.84 rifampicin Not assoc w R - Interim
rpoA 3878310 c.198G>T synonymous_variant 0.83 rifampicin Not assoc w R - Interim
rpoA 3878313 c.195G>C synonymous_variant 0.84 rifampicin Not assoc w R - Interim
rpoA 3878322 c.186A>G synonymous_variant 0.85 rifampicin Not assoc w R - Interim
rpoA 3878331 c.177A>G synonymous_variant 0.82 rifampicin Not assoc w R - Interim
rpoA 3878337 c.171T>C synonymous_variant 0.79 rifampicin Not assoc w R - Interim
rpoA 3878343 c.165C>T synonymous_variant 0.77 rifampicin Not assoc w R - Interim
rpoA 3878346 c.162T>C synonymous_variant 0.76 rifampicin
rpoA 3878364 c.144A>C synonymous_variant 0.7 rifampicin
rpoA 3878367 c.141C>G synonymous_variant 0.7 rifampicin
rpoA 3878370 c.138T>C synonymous_variant 0.69 rifampicin
rpoA 3878373 c.135G>C synonymous_variant 0.69 rifampicin
rpoA 3878381 c.127C>T synonymous_variant 0.69 rifampicin Not assoc w R - Interim
rpoA 3878391 c.117T>G synonymous_variant 0.65 rifampicin Not assoc w R - Interim
rpoA 3878400 c.108T>C synonymous_variant 0.65 rifampicin Not assoc w R - Interim
rpoA 3878433 c.75G>C synonymous_variant 0.36 rifampicin
rpoA 3878665 c.-158A>G upstream_gene_variant 0.39 rifampicin Uncertain significance
rpoA 3878672 c.-165A>T upstream_gene_variant 0.42 rifampicin
rpoA 3878694 c.-187A>G upstream_gene_variant 0.38 rifampicin
rpoA 3878695 c.-188C>G upstream_gene_variant 0.38 rifampicin
rpoA 3878698 c.-191A>G upstream_gene_variant 0.38 rifampicin
rpoA 3878701 c.-194C>G upstream_gene_variant 0.38 rifampicin
rpoA 3878713 c.-206G>A upstream_gene_variant 0.33 rifampicin Uncertain significance
rpoA 3878725 c.-218A>C upstream_gene_variant 0.29 rifampicin
rpoA 3878734 c.-229_-227delATCinsGTG upstream_gene_variant 0.28 rifampicin
rpoA 3878742 c.-235G>A upstream_gene_variant 0.29 rifampicin
rpoA 3878746 c.-239A>G upstream_gene_variant 0.27 rifampicin Uncertain significance
rpoA 3878749 c.-242G>T upstream_gene_variant 0.27 rifampicin
rpoA 3878755 c.-248G>C upstream_gene_variant 0.28 rifampicin
rpoA 3878758 c.-251G>C upstream_gene_variant 0.28 rifampicin
rpoA 3878764 c.-257A>G upstream_gene_variant 0.26 rifampicin
rpoA 3878775 c.-268A>G upstream_gene_variant 0.26 rifampicin Uncertain significance
rpoA 3878782 c.-275G>C upstream_gene_variant 0.26 rifampicin
rpoA 3878785 c.-278T>C upstream_gene_variant 0.27 rifampicin
rpoA 3878853 c.-346G>A upstream_gene_variant 0.31 rifampicin
rpoA 3878878 c.-371T>C upstream_gene_variant 0.42 rifampicin Uncertain significance
rpoA 3878884 c.-377C>G upstream_gene_variant 0.41 rifampicin
rpoA 3878887 c.-382_-380delAACinsGAT upstream_gene_variant 0.39 rifampicin
rpoA 3878893 c.-388_-386delCACinsAAG upstream_gene_variant 0.41 rifampicin
rpoA 3878900 c.-394_-393delGGinsAA upstream_gene_variant 0.43 rifampicin
rpoA 3878909 c.-402A>C upstream_gene_variant 0.43 rifampicin
rpoA 3878914 c.-407T>C upstream_gene_variant 0.46 rifampicin Uncertain significance
rpoA 3878917 c.-410G>C upstream_gene_variant 0.45 rifampicin
rpoA 3878929 c.-422G>C upstream_gene_variant 0.46 rifampicin
rpoA 3878938 c.-431T>C upstream_gene_variant 0.42 rifampicin
rpoA 3878947 c.-440G>C upstream_gene_variant 0.41 rifampicin Uncertain significance
rpoA 3878953 c.-446C>G upstream_gene_variant 0.34 rifampicin
rpoA 3878956 c.-449G>A upstream_gene_variant 0.34 rifampicin Uncertain significance
rpoA 3878962 c.-455G>C upstream_gene_variant 0.36 rifampicin
rpoA 3878968 c.-461T>C upstream_gene_variant 0.36 rifampicin Uncertain significance
rpoA 3878974 c.-469_-467delATCinsGTG upstream_gene_variant 0.38 rifampicin
rpoA 3878977 c.-470C>G upstream_gene_variant 0.37 rifampicin
rpoA 3878986 c.-479G>C upstream_gene_variant 0.38 rifampicin
rpoA 3878989 c.-482G>T upstream_gene_variant 0.37 rifampicin
rpoA 3878998 c.-491C>G upstream_gene_variant 0.28 rifampicin Uncertain significance
rpoA 3879049 c.-543_-542delAAinsCC upstream_gene_variant 0.41 rifampicin
rpoA 3879058 c.-551C>T upstream_gene_variant 0.41 rifampicin
rpoA 3879061 c.-554C>T upstream_gene_variant 0.4 rifampicin
rpoA 3879073 c.-566A>G upstream_gene_variant 0.4 rifampicin
rpoA 3879079 c.-572A>C upstream_gene_variant 0.4 rifampicin
rpoA 3879088 c.-581A>C upstream_gene_variant 0.42 rifampicin
rpoA 3879094 c.-587T>C upstream_gene_variant 0.43 rifampicin
rpoA 3879097 c.-590C>T upstream_gene_variant 0.43 rifampicin
rpoA 3879121 c.-615_-614delTTinsAG upstream_gene_variant 0.44 rifampicin
rpoA 3879124 c.-618_-617delTGinsGC upstream_gene_variant 0.43 rifampicin
rpoA 3879127 c.-620T>C upstream_gene_variant 0.44 rifampicin
rpoA 3879136 c.-629A>G upstream_gene_variant 0.46 rifampicin
rpoA 3879160 c.-653A>G upstream_gene_variant 0.51 rifampicin
rpoA 3879169 c.-662G>T upstream_gene_variant 0.56 rifampicin
ddn 3986621 c.-223G>C upstream_gene_variant 0.37 pretomanid
delamanid
clpC1 4038318 p.Pro796Leu missense_variant 0.78 pyrazinamide Not assoc w R
clpC1 4038737 c.1968C>T synonymous_variant 0.57 pyrazinamide
clpC1 4038740 c.1965G>C synonymous_variant 0.58 pyrazinamide
clpC1 4038749 c.1956C>A synonymous_variant 0.66 pyrazinamide
clpC1 4038755 c.1950G>C synonymous_variant 0.72 pyrazinamide
clpC1 4038767 c.1938G>C synonymous_variant 0.78 pyrazinamide
clpC1 4038770 c.1935C>T synonymous_variant 0.76 pyrazinamide
clpC1 4038773 c.1932T>C synonymous_variant 0.72 pyrazinamide
clpC1 4038782 c.1923G>T synonymous_variant 0.73 pyrazinamide
clpC1 4038790 c.1915C>T synonymous_variant 0.74 pyrazinamide Not assoc w R - Interim
clpC1 4038795 p.Ser637Thr missense_variant 0.73 pyrazinamide
clpC1 4038812 c.1893T>C synonymous_variant 0.76 pyrazinamide
clpC1 4038815 c.1890G>T synonymous_variant 0.78 pyrazinamide
clpC1 4038838 c.1867C>T synonymous_variant 0.83 pyrazinamide
clpC1 4038845 c.1858_1860delTCGinsAGC synonymous_variant 0.79 pyrazinamide
clpC1 4038857 c.1848C>G synonymous_variant 0.84 pyrazinamide
clpC1 4038860 c.1845G>C synonymous_variant 0.85 pyrazinamide Not assoc w R - Interim
clpC1 4038878 c.1827A>G synonymous_variant 0.85 pyrazinamide Not assoc w R - Interim
clpC1 4038908 c.1797C>G synonymous_variant 0.84 pyrazinamide
clpC1 4038911 c.1794G>C synonymous_variant 0.82 pyrazinamide
clpC1 4038914 c.1791G>T synonymous_variant 0.82 pyrazinamide
clpC1 4038917 c.1788C>T synonymous_variant 0.82 pyrazinamide
clpC1 4038923 c.1782A>T synonymous_variant 0.81 pyrazinamide
clpC1 4038928 c.1777C>A synonymous_variant 0.8 pyrazinamide
clpC1 4038929 c.1776G>A synonymous_variant 0.8 pyrazinamide Not assoc w R - Interim
clpC1 4038932 c.1773G>C synonymous_variant 0.81 pyrazinamide
clpC1 4038941 c.1764G>C synonymous_variant 0.82 pyrazinamide
clpC1 4038953 c.1752A>G synonymous_variant 0.84 pyrazinamide
clpC1 4038956 c.1749T>C synonymous_variant 0.84 pyrazinamide
clpC1 4038965 c.1740T>C synonymous_variant 0.82 pyrazinamide
clpC1 4038971 c.1734T>C synonymous_variant 0.82 pyrazinamide
clpC1 4038974 c.1731T>C synonymous_variant 0.81 pyrazinamide Not assoc w R - Interim
clpC1 4038989 c.1716T>C synonymous_variant 0.85 pyrazinamide
clpC1 4038997 c.1708T>C synonymous_variant 0.85 pyrazinamide Not assoc w R - Interim
clpC1 4039022 c.1683A>G synonymous_variant 0.82 pyrazinamide
clpC1 4039046 c.1659C>G synonymous_variant 0.81 pyrazinamide
clpC1 4039070 c.1635G>C synonymous_variant 0.84 pyrazinamide
clpC1 4039077 p.Lys543Arg missense_variant 0.86 pyrazinamide
clpC1 4039079 c.1626C>G synonymous_variant 0.86 pyrazinamide Not assoc w R - Interim
clpC1 4039085 c.1620A>G synonymous_variant 0.87 pyrazinamide
clpC1 4039091 c.1614G>T synonymous_variant 0.87 pyrazinamide
clpC1 4039097 c.1608G>T synonymous_variant 0.87 pyrazinamide
clpC1 4039103 c.1602T>C synonymous_variant 0.88 pyrazinamide
clpC1 4039106 c.1599G>C synonymous_variant 0.88 pyrazinamide
clpC1 4039121 c.1584T>C synonymous_variant 0.89 pyrazinamide
clpC1 4039142 c.1563A>G synonymous_variant 0.88 pyrazinamide
clpC1 4039145 c.1560G>C synonymous_variant 0.88 pyrazinamide
clpC1 4039169 p.Glu512Asp missense_variant 0.86 pyrazinamide
clpC1 4039172 c.1533A>G synonymous_variant 0.87 pyrazinamide
clpC1 4039178 c.1527G>C synonymous_variant 0.87 pyrazinamide
clpC1 4039183 c.1522T>C synonymous_variant 0.87 pyrazinamide
clpC1 4039190 c.1515C>T synonymous_variant 0.85 pyrazinamide
clpC1 4039196 c.1509G>A synonymous_variant 0.83 pyrazinamide
clpC1 4039199 p.Ala502Glu missense_variant 0.82 pyrazinamide
clpC1 4039208 c.1497C>G synonymous_variant 0.78 pyrazinamide
clpC1 4039220 c.1485G>C synonymous_variant 0.76 pyrazinamide
clpC1 4039262 c.1443C>T synonymous_variant 0.73 pyrazinamide Not assoc w R - Interim
clpC1 4039265 c.1440C>T synonymous_variant 0.71 pyrazinamide
clpC1 4039271 c.1434G>A synonymous_variant 0.71 pyrazinamide
clpC1 4039283 c.1422C>T synonymous_variant 0.69 pyrazinamide
clpC1 4039286 c.1417_1419delCTTinsTTA synonymous_variant 0.68 pyrazinamide
clpC1 4039289 c.1416T>C synonymous_variant 0.68 pyrazinamide
clpC1 4039292 c.1413C>T synonymous_variant 0.69 pyrazinamide
clpC1 4039304 c.1401G>A synonymous_variant 0.72 pyrazinamide
clpC1 4039316 p.Glu463Asp missense_variant 0.64 pyrazinamide
clpC1 4039319 c.1386T>C synonymous_variant 0.64 pyrazinamide Not assoc w R - Interim
clpC1 4039328 c.1377A>C synonymous_variant 0.65 pyrazinamide
clpC1 4039331 c.1374C>G synonymous_variant 0.63 pyrazinamide
clpC1 4039337 p.Thr456Gln missense_variant 0.61 pyrazinamide
clpC1 4039346 p.Arg453Ser missense_variant 0.63 pyrazinamide
clpC1 4039360 p.Ser449Arg missense_variant 0.72 pyrazinamide
clpC1 4039361 c.1344C>G synonymous_variant 0.71 pyrazinamide
clpC1 4039382 c.1323C>G synonymous_variant 0.76 pyrazinamide
clpC1 4039391 c.1314T>C synonymous_variant 0.76 pyrazinamide
clpC1 4039409 c.1296T>C synonymous_variant 0.73 pyrazinamide
clpC1 4039412 c.1293T>G synonymous_variant 0.73 pyrazinamide
clpC1 4039415 p.Glu430Asp missense_variant 0.74 pyrazinamide Uncertain significance
clpC1 4039430 c.1275T>C synonymous_variant 0.75 pyrazinamide
clpC1 4039442 c.1263A>G synonymous_variant 0.73 pyrazinamide
clpC1 4039454 c.1251A>G synonymous_variant 0.76 pyrazinamide Not assoc w R - Interim
clpC1 4039466 c.1239T>C synonymous_variant 0.78 pyrazinamide
clpC1 4039469 c.1236T>C synonymous_variant 0.78 pyrazinamide
clpC1 4039472 c.1233G>C synonymous_variant 0.79 pyrazinamide
clpC1 4039478 c.1227G>C synonymous_variant 0.79 pyrazinamide
clpC1 4039481 c.1224T>C synonymous_variant 0.8 pyrazinamide
clpC1 4039487 c.1218G>C synonymous_variant 0.81 pyrazinamide
clpC1 4039522 c.1183C>T synonymous_variant 0.83 pyrazinamide
clpC1 4039528 c.1177C>A synonymous_variant 0.83 pyrazinamide
clpC1 4039541 c.1164C>G synonymous_variant 0.85 pyrazinamide
clpC1 4039544 c.1161C>T synonymous_variant 0.83 pyrazinamide
clpC1 4039559 c.1146C>G synonymous_variant 0.84 pyrazinamide
clpC1 4039565 c.1140G>T synonymous_variant 0.82 pyrazinamide
clpC1 4039570 p.Met379Leu missense_variant 0.82 pyrazinamide Uncertain significance
clpC1 4039571 c.1134G>A synonymous_variant 0.82 pyrazinamide
clpC1 4039574 p.Ala377Gly missense_variant 0.82 pyrazinamide
clpC1 4039586 c.1119G>C synonymous_variant 0.87 pyrazinamide
clpC1 4039601 c.1104G>A synonymous_variant 0.85 pyrazinamide
clpC1 4039610 c.1095G>C synonymous_variant 0.84 pyrazinamide
clpC1 4039616 c.1089G>C synonymous_variant 0.83 pyrazinamide
clpC1 4039619 c.1086G>A synonymous_variant 0.83 pyrazinamide
clpC1 4039622 c.1083C>T synonymous_variant 0.79 pyrazinamide
clpC1 4039649 c.1056G>C synonymous_variant 0.77 pyrazinamide
clpC1 4039652 c.1053G>A synonymous_variant 0.79 pyrazinamide
clpC1 4039661 c.1044T>C synonymous_variant 0.79 pyrazinamide
clpC1 4039682 c.1023C>G synonymous_variant 0.77 pyrazinamide
clpC1 4039694 c.1011G>C synonymous_variant 0.72 pyrazinamide
clpC1 4039724 c.981A>G synonymous_variant 0.75 pyrazinamide
clpC1 4039733 c.972G>A synonymous_variant 0.73 pyrazinamide
clpC1 4039739 c.966C>G synonymous_variant 0.72 pyrazinamide
clpC1 4039742 c.963C>T synonymous_variant 0.72 pyrazinamide
clpC1 4039748 c.957G>C synonymous_variant 0.69 pyrazinamide
clpC1 4039751 c.954A>G synonymous_variant 0.68 pyrazinamide
clpC1 4039754 c.951G>A synonymous_variant 0.67 pyrazinamide
clpC1 4039757 c.948A>G synonymous_variant 0.69 pyrazinamide
clpC1 4039760 c.945T>C synonymous_variant 0.69 pyrazinamide
clpC1 4039763 c.942C>T synonymous_variant 0.69 pyrazinamide Not assoc w R - Interim
clpC1 4039769 c.936C>G synonymous_variant 0.75 pyrazinamide
clpC1 4039778 c.927A>G synonymous_variant 0.78 pyrazinamide
clpC1 4039793 c.912C>G synonymous_variant 0.84 pyrazinamide
clpC1 4039799 c.906C>T synonymous_variant 0.82 pyrazinamide
clpC1 4039814 c.891C>G synonymous_variant 0.83 pyrazinamide
clpC1 4039817 c.888A>C synonymous_variant 0.82 pyrazinamide Not assoc w R - Interim
clpC1 4039820 c.885T>G synonymous_variant 0.82 pyrazinamide
clpC1 4039826 c.879C>G synonymous_variant 0.82 pyrazinamide
clpC1 4039831 c.874T>C synonymous_variant 0.83 pyrazinamide
clpC1 4039832 c.873C>G synonymous_variant 0.83 pyrazinamide
clpC1 4039850 c.855T>C synonymous_variant 0.84 pyrazinamide
clpC1 4039868 c.837C>T synonymous_variant 0.84 pyrazinamide Not assoc w R - Interim
clpC1 4039913 c.792C>T synonymous_variant 0.86 pyrazinamide
clpC1 4039931 c.774T>C synonymous_variant 0.81 pyrazinamide
clpC1 4039934 c.771G>C synonymous_variant 0.78 pyrazinamide
clpC1 4039943 c.762G>C synonymous_variant 0.78 pyrazinamide
clpC1 4039946 c.759A>G synonymous_variant 0.77 pyrazinamide
clpC1 4039952 c.753T>C synonymous_variant 0.78 pyrazinamide
clpC1 4039957 c.748C>T synonymous_variant 0.76 pyrazinamide
clpC1 4039958 c.747G>C synonymous_variant 0.76 pyrazinamide
clpC1 4039964 c.741C>G synonymous_variant 0.77 pyrazinamide
clpC1 4039975 p.Asp244Asn missense_variant 0.8 pyrazinamide Uncertain significance
clpC1 4039979 c.726C>G synonymous_variant 0.8 pyrazinamide
clpC1 4039982 c.723G>A synonymous_variant 0.79 pyrazinamide Not assoc w R - Interim
clpC1 4040009 c.696C>G synonymous_variant 0.82 pyrazinamide
clpC1 4040015 c.690G>C synonymous_variant 0.8 pyrazinamide
clpC1 4040021 c.684A>T synonymous_variant 0.8 pyrazinamide
clpC1 4040024 c.681A>G synonymous_variant 0.8 pyrazinamide
clpC1 4040033 c.672G>C synonymous_variant 0.83 pyrazinamide
clpC1 4040048 c.657C>T synonymous_variant 0.83 pyrazinamide Not assoc w R - Interim
clpC1 4040087 c.618G>C synonymous_variant 0.86 pyrazinamide
clpC1 4040090 c.613_615delTCTinsAGC synonymous_variant 0.86 pyrazinamide
clpC1 4040093 c.612C>G synonymous_variant 0.86 pyrazinamide Not assoc w R - Interim
clpC1 4040126 c.579C>T synonymous_variant 0.77 pyrazinamide Not assoc w R - Interim
clpC1 4040141 c.564C>T synonymous_variant 0.74 pyrazinamide
clpC1 4040144 c.561G>C synonymous_variant 0.7 pyrazinamide
clpC1 4040147 c.558A>G synonymous_variant 0.7 pyrazinamide Not assoc w R - Interim
clpC1 4040153 c.552A>G synonymous_variant 0.65 pyrazinamide
clpC1 4040159 c.546G>C synonymous_variant 0.6 pyrazinamide
clpC1 4040162 c.543G>C synonymous_variant 0.61 pyrazinamide Not assoc w R - Interim
clpC1 4040168 c.537G>C synonymous_variant 0.62 pyrazinamide
clpC1 4040171 c.534C>G synonymous_variant 0.62 pyrazinamide
clpC1 4040174 c.531C>T synonymous_variant 0.64 pyrazinamide
clpC1 4040200 c.505T>C synonymous_variant 0.58 pyrazinamide
clpC1 4040201 c.504C>G synonymous_variant 0.57 pyrazinamide
clpC1 4040210 c.495G>T synonymous_variant 0.5 pyrazinamide
clpC1 4040213 p.Ser164Thr missense_variant 0.48 pyrazinamide
clpC1 4040221 p.Ser162Ala missense_variant 0.46 pyrazinamide
clpC1 4040222 c.483G>A synonymous_variant 0.46 pyrazinamide
clpC1 4040228 c.477G>C synonymous_variant 0.45 pyrazinamide
clpC1 4040231 c.472_474delCGCinsAGG synonymous_variant 0.45 pyrazinamide
clpC1 4040237 c.468C>T synonymous_variant 0.42 pyrazinamide
clpC1 4040243 c.462C>T synonymous_variant 0.42 pyrazinamide Not assoc w R - Interim
clpC1 4040246 p.Ala153Ser missense_variant 0.43 pyrazinamide
clpC1 4040252 c.453C>A synonymous_variant 0.52 pyrazinamide
clpC1 4040257 p.Ala150Thr missense_variant 0.53 pyrazinamide
clpC1 4040267 c.438A>G synonymous_variant 0.56 pyrazinamide Not assoc w R - Interim
clpC1 4040276 c.427_429delTCCinsAGT synonymous_variant 0.58 pyrazinamide
clpC1 4040291 c.414G>C synonymous_variant 0.66 pyrazinamide
clpC1 4040300 c.405C>T synonymous_variant 0.67 pyrazinamide
clpC1 4040309 c.396C>T synonymous_variant 0.73 pyrazinamide
clpC1 4040333 c.372G>C synonymous_variant 0.66 pyrazinamide
clpC1 4040342 c.363C>A synonymous_variant 0.66 pyrazinamide
clpC1 4040348 c.357G>T synonymous_variant 0.65 pyrazinamide
clpC1 4040354 c.351A>G synonymous_variant 0.65 pyrazinamide
clpC1 4040357 c.348T>C synonymous_variant 0.66 pyrazinamide
clpC1 4040363 c.342A>C synonymous_variant 0.66 pyrazinamide
clpC1 4040366 c.339C>T synonymous_variant 0.64 pyrazinamide
clpC1 4040369 c.336C>G synonymous_variant 0.62 pyrazinamide
clpC1 4040375 c.330G>C synonymous_variant 0.61 pyrazinamide
clpC1 4040380 c.325T>C synonymous_variant 0.65 pyrazinamide
clpC1 4040381 c.324T>C synonymous_variant 0.66 pyrazinamide
clpC1 4040387 c.318A>G synonymous_variant 0.7 pyrazinamide
clpC1 4040393 c.312G>C synonymous_variant 0.71 pyrazinamide Not assoc w R - Interim
clpC1 4040411 c.294T>C synonymous_variant 0.74 pyrazinamide Not assoc w R - Interim
clpC1 4040423 c.282A>G synonymous_variant 0.72 pyrazinamide Not assoc w R - Interim
clpC1 4040426 c.279T>C synonymous_variant 0.69 pyrazinamide
clpC1 4040431 c.274T>C synonymous_variant 0.68 pyrazinamide
clpC1 4040441 c.264C>G synonymous_variant 0.69 pyrazinamide
clpC1 4040444 c.261C>G synonymous_variant 0.69 pyrazinamide
clpC1 4040450 c.255A>G synonymous_variant 0.68 pyrazinamide Not assoc w R - Interim
clpC1 4040456 c.249C>T synonymous_variant 0.64 pyrazinamide Not assoc w R - Interim
clpC1 4040459 c.246C>G synonymous_variant 0.64 pyrazinamide
clpC1 4040462 c.243C>T synonymous_variant 0.62 pyrazinamide
clpC1 4040465 c.240T>C synonymous_variant 0.6 pyrazinamide
clpC1 4040480 c.225T>C synonymous_variant 0.63 pyrazinamide Not assoc w R - Interim
clpC1 4040495 c.210C>T synonymous_variant 0.67 pyrazinamide
clpC1 4040498 c.207G>A synonymous_variant 0.31 pyrazinamide Not assoc w R - Interim
clpC1 4040522 c.183T>C synonymous_variant 0.73 pyrazinamide Not assoc w R - Interim
clpC1 4040531 c.174T>G synonymous_variant 0.73 pyrazinamide
clpC1 4040546 c.159G>C synonymous_variant 0.68 pyrazinamide
clpC1 4040558 c.147G>C synonymous_variant 0.58 pyrazinamide
clpC1 4040561 c.144A>G synonymous_variant 0.56 pyrazinamide
clpC1 4040573 c.132T>C synonymous_variant 0.52 pyrazinamide Not assoc w R - Interim
clpC1 4040579 c.126A>G synonymous_variant 0.51 pyrazinamide
clpC1 4040582 c.123G>C synonymous_variant 0.5 pyrazinamide Not assoc w R - Interim
clpC1 4040585 c.120A>G synonymous_variant 0.49 pyrazinamide
clpC1 4040597 c.108C>T synonymous_variant 0.48 pyrazinamide
clpC1 4040600 c.103_105delTTAinsCTG synonymous_variant 0.48 pyrazinamide
clpC1 4040603 c.102T>G synonymous_variant 0.47 pyrazinamide
clpC1 4040606 c.99T>C synonymous_variant 0.47 pyrazinamide
panD 4044114 p.Val56Glu missense_variant 0.21 pyrazinamide
panD 4044120 c.162A>G synonymous_variant 0.23 pyrazinamide
panD 4044123 c.159T>C synonymous_variant 0.25 pyrazinamide
panD 4044126 c.156T>G synonymous_variant 0.29 pyrazinamide
panD 4044138 c.144T>C synonymous_variant 0.43 pyrazinamide Not assoc w R - Interim
panD 4044150 c.132A>C synonymous_variant 0.43 pyrazinamide
panD 4044156 c.126A>G synonymous_variant 0.41 pyrazinamide Not assoc w R - Interim
panD 4044167 c.115C>T synonymous_variant 0.43 pyrazinamide
panD 4044171 c.111C>T synonymous_variant 0.43 pyrazinamide
panD 4044174 c.108C>T synonymous_variant 0.43 pyrazinamide
panD 4044180 p.Asp34Glu missense_variant 0.44 pyrazinamide
panD 4044186 c.94_96delTTGinsCTC synonymous_variant 0.47 pyrazinamide
panD 4044189 c.93C>T synonymous_variant 0.44 pyrazinamide
panD 4044194 p.Ala30Pro missense_variant 0.47 pyrazinamide
panD 4044195 c.87T>C synonymous_variant 0.47 pyrazinamide
panD 4044219 c.63C>T synonymous_variant 0.54 pyrazinamide Not assoc w R - Interim
panD 4044232 p.Cys17His missense_variant 0.51 pyrazinamide
panD 4044234 c.48C>G synonymous_variant 0.51 pyrazinamide
panD 4044249 c.33C>T synonymous_variant 0.51 pyrazinamide
panD 4044266 p.Leu6Met missense_variant 0.43 pyrazinamide
panD 4044273 c.9G>C synonymous_variant 0.37 pyrazinamide
panD 4044276 p.Leu2Phe missense_variant 0.31 pyrazinamide
glpK 4138508 c.1248C>G synonymous_variant 0.24 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138514 c.1242A>G synonymous_variant 0.29 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138517 c.1239A>G synonymous_variant 0.33 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138526 p.Asp410Glu missense_variant 0.44 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138529 c.1227G>C synonymous_variant 0.47 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138535 p.Asp407Glu missense_variant 0.52 levofloxacin
moxifloxacin Uncertain significance
isoniazid Uncertain significance
streptomycin Uncertain significance
rifampicin Uncertain significance
ethambutol Uncertain significance
glpK 4138538 c.1218C>G synonymous_variant 0.54 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138550 c.1206C>T synonymous_variant 0.56 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138556 c.1200G>C synonymous_variant 0.56 levofloxacin
moxifloxacin
isoniazid Not assoc w R - Interim
streptomycin
rifampicin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
glpK 4138559 c.1197G>A synonymous_variant 0.56 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138562 c.1194G>C synonymous_variant 0.58 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138565 c.1191G>A synonymous_variant 0.58 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138568 c.1188A>G synonymous_variant 0.58 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138601 c.1155G>C synonymous_variant 0.57 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138606 c.1150T>C synonymous_variant 0.53 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138607 c.1149G>T synonymous_variant 0.53 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138610 c.1146C>G synonymous_variant 0.56 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138616 c.1140G>C synonymous_variant 0.59 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138625 c.1131G>A synonymous_variant 0.65 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138631 c.1125C>G synonymous_variant 0.64 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138634 c.1122G>A synonymous_variant 0.63 levofloxacin
moxifloxacin
isoniazid Not assoc w R - Interim
streptomycin Not assoc w R - Interim
rifampicin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
glpK 4138643 c.1113A>G synonymous_variant 0.64 levofloxacin
moxifloxacin
isoniazid Not assoc w R - Interim
streptomycin
rifampicin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
glpK 4138664 c.1092G>C synonymous_variant 0.67 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138679 p.Met359Val missense_variant 0.62 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138694 p.Pro354Glu missense_variant 0.58 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138706 c.1050C>G synonymous_variant 0.63 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138712 p.Ala348Asp missense_variant 0.65 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138718 c.1038T>C synonymous_variant 0.65 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138721 c.1035G>A synonymous_variant 0.63 levofloxacin Not assoc w R - Interim
moxifloxacin Not assoc w R - Interim
isoniazid Not assoc w R - Interim
streptomycin
rifampicin Not assoc w R - Interim
ethambutol Not assoc w R - Interim
glpK 4138724 p.Ala344Ser missense_variant 0.63 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138730 c.1026C>T synonymous_variant 0.63 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138751 c.1005T>C synonymous_variant 0.58 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138757 c.999A>G synonymous_variant 0.57 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138772 c.984G>C synonymous_variant 0.52 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
glpK 4138778 c.978C>G synonymous_variant 0.48 levofloxacin
moxifloxacin
isoniazid
streptomycin
rifampicin
ethambutol
embC 4240729 c.867C>G synonymous_variant 0.47 ethambutol
embC 4240735 c.873C>G synonymous_variant 0.5 ethambutol
embC 4240741 c.879C>T synonymous_variant 0.5 ethambutol
embC 4240756 c.894G>C synonymous_variant 0.6 ethambutol
embC 4240771 c.909G>C synonymous_variant 0.54 ethambutol
embC 4240772 p.Ser304Ala missense_variant 0.54 ethambutol
embC 4240778 p.His306Gly missense_variant 0.51 ethambutol
embC 4240781 p.Ala307Ser missense_variant 0.52 ethambutol Uncertain significance
embC 4240789 c.927T>C synonymous_variant 0.54 ethambutol
embC 4240819 c.957A>C synonymous_variant 0.55 ethambutol
embC 4240826 p.Ala322Ser missense_variant 0.55 ethambutol
embC 4240831 c.969T>G synonymous_variant 0.55 ethambutol
embC 4240856 p.Ala332Thr missense_variant 0.38 ethambutol
embC 4240859 p.Leu333Ile missense_variant 0.36 ethambutol
embC 4240876 c.1014C>T synonymous_variant 0.32 ethambutol
embC 4240879 c.1017G>T synonymous_variant 0.27 ethambutol
embC 4242643 c.2781C>T synonymous_variant 1.0 ethambutol Not assoc w R
embA 4243760 p.Asp176Glu missense_variant 0.94 ethambutol Uncertain significance
whiB6 4338595 c.-75delG upstream_gene_variant 1.0 kanamycin Not assoc w R
capreomycin Not assoc w R
amikacin Not assoc w R
whiB6 4338732 c.-211C>T upstream_gene_variant 1.0 kanamycin
capreomycin
amikacin