Rv0001 - c.720G>A


Drug resistance types
29 Sensitive 0 RR-TB 19 HR-TB 6 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 96 Other
lineage Counts
lineage Count
lineage4.9 50
lineage3 3
lineage2.2.1 9
La1.7.X-unk4;lineage4.9 1
lineage2.2.1;lineage4 1
La3;lineage1.1.2 1
lineage2.2 3
lineage4.1.2.1 7
lineage2.1 2
lineage2.1;lineage4.9 9
La1.7;lineage4.9;lineage7 3
lineage4.4.1.1 2
lineage1;lineage4.9 1
lineage4.1.1.1 1
lineage4.3.2 1
lineage2.1;lineage4.9;lineage6.3 5
lineage4.3.3 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage4 3
13
La3;M.canetti 1
La1;lineage4.9 1
La3;lineage4.8 1
lineage2.1;lineage6.3 2
La1.2.BCG;La1.8.1 1
lineage4.6.1.1 1
lineage4.1.3 2
M.canetti;lineage1 1
lineage4.3.1;lineage4.9;lineage6 1
lineage4.8 2
lineage4.1;lineage4.9 2
La3;lineage2.1;lineage4.9;lineage6.3 1
M.canetti 2
La1.7;lineage3;lineage4.9;lineage7 1
lineage4.1.1.3;lineage4.9 2
lineage4.6.2.2 1
lineage5.1.4 1
lineage4.9;lineage6.3 2
lineage4.2.1.1;lineage4.3.3 1
lineage6.3.1 1
lineage4.2.1 1
lineage4.2.2.2 1
lineage4.4.2 1
lineage4.5 1
M.canetti;lineage2.1;lineage6.3 1
lineage4.1.1.3 1
spoligotype Counts
spoligotype Count
None 151
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR369162 Other lineage4.9 None
SRR3675275 Other lineage4.9 None
ERR4800341 HR-TB lineage3 None
SRR3675549 Other lineage4.9 None
ERR400320 Sensitive lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR3797069 Other lineage4.9 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
SRR6046878 Other lineage4.9 None
ERR9117721 HR-TB La3;lineage1.1.2 None
SRR20969708 HR-TB lineage2.2 None
ERR4821686 Sensitive lineage4.1.2.1 None
ERR702406 Other lineage2.1 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR6046564 Sensitive lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR5341345 Sensitive lineage4.9 None
ERR400345 Other lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR11662694 Other lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
ERR4811030 Other lineage4.9 None
SRR3675477 Sensitive lineage4.9 None
ERR400326 Other lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR9117805 Other lineage4.3.2 None
SRR3675221 Other lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045706 Other lineage4.9 None
SRR1165699 Other lineage4.9 None
SRR12708409 HR-TB lineage4.3.3 None
SRR3675387 Other lineage4.9 None
SRR5341296 Sensitive lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR3675247 Other lineage4.9 None
ERR4797588 MDR-TB lineage3 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR3675311 Other lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
SRR7131023 Other lineage4.1.2.1 None
SRR11662690 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
SRR6045053 Other lineage4 None
SRR7496509 Other None
ERR9786604 Other None
SRR18213713 HR-TB None
ERR4407463 HR-TB None
ERR349300 Other lineage4.9 None
ERR266125 Other La3;M.canetti None
ERR4769497 Other La1;lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4810624 MDR-TB lineage2.2 None
ERR4817893 Other La3;lineage4.8 None
SRR6046046 Other lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR4817896 HR-TB lineage2.2.1 None
SRR3675455 Sensitive lineage4.9 None
SRR3675473 Sensitive lineage4.9 None
ERR3283044 Other lineage4 None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR6358755 Other lineage4.6.1.1 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
SRR6046066 Other lineage4.9 None
ERR2027263 Other lineage4 None
ERR3804169 HR-TB lineage4.1.3 None
SRR3675580 Sensitive lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
SRR3675318 Other lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
ERR9786421 Other lineage4.1.2.1 None
SRR5341432 Other La1.7;lineage4.9;lineage7 None
SRR12708384 Sensitive lineage4.9 None
ERR4814352 Other lineage2.2.1 None
ERR4812155 Other lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
SRR12708372 Sensitive lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR4797313 Sensitive lineage2.2.1 None
ERR9786694 Other lineage4.1.2.1 None
SRR3675514 Sensitive lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR2229542 Other lineage4.8 None
ERR4769452 Other lineage4.9 None
ERR4798431 Other lineage4.1;lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR266124 Other M.canetti None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR12708419 Other lineage4.3.3 None
SRR2010299 MDR-TB lineage2.2.1 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
ERR2513283 Sensitive lineage5.1.4 None
SRR5341456 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR4815604 Other None
ERR9117709 Other None
SRR6789626 Other None
ERR9787197 Other None
ERR4816999 Other None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR5336148 Other lineage2.1;lineage6.3 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR1175496 Sensitive lineage4.9 None
ERR9787139 Other lineage6.3.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR266123 Other M.canetti None
ERR9786569 Other lineage4.8 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR20969731 Other lineage2.2.1 None
SRR6046245 Other lineage4.9 None
ERR2512770 Sensitive lineage4.2.1 None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR6045347 Other lineage4.9 None
ERR2513470 Other lineage4.2.2.2 None
SRR25515165 HR-TB lineage4.4.2 None
SRR3675548 Sensitive lineage4.9 None
ERR4811031 Other lineage4.5 None
ERR400336 Sensitive lineage4.9 None
SRR7496472 Other lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
ERR2514552 Sensitive lineage3 None
SRR3675522 Other lineage4.9 None
ERR3797070 Other lineage4.9 None
SRR3675541 Sensitive lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR9786611 HR-TB lineage4.1.3 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR4769450 Other lineage4.9 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
SRR12708371 HR-TB lineage4.1.1.3 None
ERR9786642 Other lineage4.1.2.1 None
SRR3675572 Other None
ERR9786671 Other None
SRR3675236 Other None
SRR12708416 Sensitive None